mRNA_F-serratus_M_contig105.519.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Match: Q5IW12_GECLA (Calpain B n=1 Tax=Gecarcinus lateralis TaxID=6769 RepID=Q5IW12_GECLA) HSP 1 Score: 128 bits (321), Expect = 2.090e-26 Identity = 82/225 (36.44%), Postives = 115/225 (51.11%), Query Frame = 3 Query: 1128 DQTGLDHEGELPKHLFDSFIAKDQQATAFL---QFWSEGSVNHVLIPNGTLWEDSDFPVDQSSICLREGVISPSLPPPEAIRWLRPSEIAKGDQTVLFAGDFPGDGPIVPGQLADQWLLSAMAILTGRPHLLRLLF---QHTGQEDAGRYCIRLFKDANWIDVFVDSRVPCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDLTGGVAE 1784 ++T D EG +FD F ++ + Q + + NGTL+ED DFP + +SI S PP+ W RP EI D+ LF D + G+L D WLL+A+A LT L + Q G AG + R ++ W+DV VD R+P + G+++F H +E++E W L EKA+AK HG YE L G TCEA+ D TGGV+E Sbjct: 43 EKTLYDDEGNEMFFVFDKFYMFGERGSGLRPRGQVQDFYELRQQCLDNGTLFEDPDFPAEDTSIFF-------SRSPPKPFEWKRPHEIT--DEPQLFI-DGATRFDVKQGELGDCWLLAAVANLTLNRRLFYQIVPSDQGFGDNYAGIFHFRFWQYGRWVDVVVDDRLP-TFYGRLVFMHSEEKNEFWSALAEKAYAKLHGSYEALKGGTTCEAMEDFTGGVSE 256
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Match: UPI0008F9A191 (calpain-A isoform X1 n=5 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9A191) HSP 1 Score: 126 bits (317), Expect = 8.310e-26 Identity = 96/298 (32.21%), Postives = 135/298 (45.30%), Query Frame = 3 Query: 1254 IPNGTLWEDSDFPVDQSSICLREGVISPSLPPPEAIRWLRPSEIAKGDQTVLFAGDFPGDGPIVPGQLADQWLLSAMAILTGRPHLL-RLLFQHTGQED--AGRYCIRLFKDANWIDVFVDSRVPCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDLTGGVAEKLQWAR------------FSASSTR-MTLELQPRIQPDTSP-------------------ASGKVGDATPCLRLTG-WGLSAGET-----RSSGWIFDEMKNRISRGQVLGCSLQTWL 2024 + NGTL+ED DFP D +SI S PP + W RPSEI+ + + G D +V G+L D WLL+A+A LT L +++ G ED AG + R ++ W+DV +D R+P GK++F H ++E W L+EKA+AK HG YE L G TCEA+ D TGGV E + + + SS ++E PR+ T+P A+ P LRL WG A T +S W F + G + W+ Sbjct: 137 LANGTLFEDPDFPCDDTSIFF-------SKPPTKPFEWRRPSEISTNPK-LFVEGATRFD--VVQGELGDCWLLAAVANLTLSDQLFYQVVPNDQGFEDKYAGIFHFRFWQYGRWVDVVIDDRLPTCY-GKLVFLHSSTQNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVTELYELSEAPENLFHIILKAYERSSLMGCSIEPDPRVLEATTPLGLVKGHAYSITKVKSVDIATPNTSGKIPLLRLRNPWGNEAEWTGPWGDKSREWQFISEAEKAEMGLTFDEDGEFWM 423
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Match: A0A0P4WJH6_SCYOL (Uncharacterized protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4WJH6_SCYOL) HSP 1 Score: 126 bits (316), Expect = 9.150e-26 Identity = 75/178 (42.13%), Postives = 100/178 (56.18%), Query Frame = 3 Query: 1260 NGTLWEDSDFPVDQSSICLREGVISPSLPPPEAIRWLRPSEIAKGDQTVLFAGDFPGDGPIVPGQLADQWLLSAMAILTGRPHLLRLLF---QHTGQEDAGRYCIRLFKDANWIDVFVDSRVPCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDLTGGVAE 1784 +GTL+ED DFP + SSI S PP+ W RP EI D+ LF D + G+L D WLL+A+A LT L + Q G AG + R ++ W+DV VD R+P + G+++F H +E++E W LVEKA+AK HG YE L G TCEA+ D TGGV+E Sbjct: 110 SGTLFEDPDFPAEDSSIFF-------SRSPPKPFEWKRPHEIT--DEPQLFI-DGATRFDVKQGELGDCWLLAAVANLTLNRRLFYQIVPSDQSFGDNYAGIFHFRFWQYGRWVDVVVDDRLP-TFYGRLVFMHSEEKNEFWSALVEKAYAKLHGSYEALKGGTTCEAMEDFTGGVSE 276
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Match: A0A6V7UHR3_9BILA (Hypothetical protein n=4 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7UHR3_9BILA) HSP 1 Score: 126 bits (316), Expect = 1.020e-25 Identity = 69/175 (39.43%), Postives = 101/175 (57.71%), Query Frame = 3 Query: 1269 LWEDSDFPVDQSSICLREGVISPSLPPPEAIRWLRPSEIAKGDQTVLFAGDFPGDGPIVPGQLADQWLLSAMAILTGRPHLLRLLF---QHTGQEDAGRYCIRLFKDANWIDVFVDSRVPCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDLTGGVAE 1784 L+ED DF + S+ S PP E ++WLRP EI K D ++ G D ++ G+L D WL++A A LT R L + Q + AG + + ++ W+DV +D R+PCS+DG++L+ H ++ +E W L+EKA+AK HG YE L G T EAL D+TGG+ E Sbjct: 353 LYEDPDFTANTQSLFF-------SRPPTERVQWLRPGEIVK-DPQLICEGHSRFD--VIQGKLGDCWLMAAAANLTLRDELFYRVVPPDQSFTENYAGIFHFQFWQYGRWVDVVIDDRLPCSMDGELLYMHSRDLNEFWSALLEKAYAKLHGSYEALKGGTTSEALEDMTGGLTE 517
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Match: A0A1S3D0R0_DIACI (calpain-A isoform X4 n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3D0R0_DIACI) HSP 1 Score: 125 bits (315), Expect = 1.190e-25 Identity = 79/214 (36.92%), Postives = 113/214 (52.80%), Query Frame = 3 Query: 1254 IPNGTLWEDSDFPVDQSSICLREGVISPSLPPPEAIRWLRPSEIAKGDQTVLFAGDFPGDGPIVPGQLADQWLLSAMAILTGRPHLLRLLF---QHTGQEDAGRYCIRLFKDANWIDVFVDSRVPCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDLTGGVAEKLQWARFSASSTRMTLELQPR-------IQPDTS 1865 + GTL+ED DFP D SSI S PP++ W+RP EI + + G D + G+L D WLL+A+A LT L R + Q G + AG + R ++ W+DV +D R+P + GK++F H +E W L+EKA+AK HG YE L G TCEA+ D TGGV+E + ++ ++ L+ R I+PD S Sbjct: 65 LSQGTLFEDPDFPCDDSSIFY-------SKMPPKSFEWMRPMEICNNPE-LFVEGASRFD--VQQGELGDCWLLAAVANLTLNDVLFRQVVPEDQGFGDKYAGIFHFRFWQYGRWVDVVIDDRLP-TYYGKLVFLHSSTDNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEMYELNEAPSNLWQILLKAHERSSLMGCSIEPDPS 267
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Match: A0A1S3D0P2_DIACI (calpain-A isoform X1 n=11 Tax=Psylloidea TaxID=33375 RepID=A0A1S3D0P2_DIACI) HSP 1 Score: 125 bits (315), Expect = 1.260e-25 Identity = 79/214 (36.92%), Postives = 113/214 (52.80%), Query Frame = 3 Query: 1254 IPNGTLWEDSDFPVDQSSICLREGVISPSLPPPEAIRWLRPSEIAKGDQTVLFAGDFPGDGPIVPGQLADQWLLSAMAILTGRPHLLRLLF---QHTGQEDAGRYCIRLFKDANWIDVFVDSRVPCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDLTGGVAEKLQWARFSASSTRMTLELQPR-------IQPDTS 1865 + GTL+ED DFP D SSI S PP++ W+RP EI + + G D + G+L D WLL+A+A LT L R + Q G + AG + R ++ W+DV +D R+P + GK++F H +E W L+EKA+AK HG YE L G TCEA+ D TGGV+E + ++ ++ L+ R I+PD S Sbjct: 85 LSQGTLFEDPDFPCDDSSIFY-------SKMPPKSFEWMRPMEICNNPE-LFVEGASRFD--VQQGELGDCWLLAAVANLTLNDVLFRQVVPEDQGFGDKYAGIFHFRFWQYGRWVDVVIDDRLP-TYYGKLVFLHSSTDNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEMYELNEAPSNLWQILLKAHERSSLMGCSIEPDPS 287
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Match: A0A6G0HMS5_LARCR (Calpain-2 catalytic subunit n=3 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0HMS5_LARCR) HSP 1 Score: 124 bits (312), Expect = 2.070e-25 Identity = 145/605 (23.97%), Postives = 227/605 (37.52%), Query Frame = 3 Query: 1236 SVNHVLIPNGTLWEDSDFPVDQSSICLREGVISPSLPPPEAIRWLRPSEIAKGDQTVLFAGDFPGDGPIVPGQLADQWLLSAMAILTGRPHLLRLLF---QHTGQEDAGRYCIRLFKDANWIDVFVDSRVPCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDLTGGVAEKLQWARFSASSTRMTLELQPRIQPDTSPASGKVGDATPCLRLTGWGLSAGETRSSGWIFDEMKNRISRGQVLGCSLQTWLRDPWEDQDEESNTPNQDDGVEMNRRRKAPSGRNGMLFPPSNRIMKGVSSWVAYCVLEAFETDKLRLVRLKDPWSGRFFGAQPGQYLGDWGPKSPLWS-ARPTLASELLPRTLPGMFWMAFDTFVEVFNTLYAVDLAEDIEGQTTGGMANNNKQEKKLTNKRAHKSSAIGFREGRCEGRWE-GPMCGGRFTDGKGWLAGTQAFLQIEPCS--PKRSESAMTTPSAVKARNADKKANIYITLTQEDSRYHGKDYSTRDERRRSIGFLVHSHKWLAESVRGIPKL----SKIVQNETKHVTCPFVPRRDVSIHLALPPGQYAILPTTLVPGTPGRFWVHVKS 3017 +++ + NG L+ED+ FP + S+ E + P + W RP E+ + F D I G L D WLL+A+A LT +L + Q + AG + + ++ W+DV VD R+P DGK+LF H E E W L+EKA+AK HGCYE L G T E D TGG++E V D P +F M+ + G +LGCS+ + + +A + R +++KG + V F ++LVR+++PW ++ G W S W S+L G FWM+F F+ F+ L +L D L++ H +S + EG W G GG + + Q +++E P E T + L Q+ R K RD +IGF ++ + + +G + +++ ++ F+ R+V LPPG+YAI+P+T P G F + V S Sbjct: 34 TLHQQCLMNGHLFEDNCFPAESKSLGYNE--LGPYSSKTRGVVWKRPKELCSEPK---FIDDGATRTDICQGALGDCWLLAAIASLTLDQRILARVVPQGQSFTENYAGIFHFQFWQFGEWVDVVVDDRLPTR-DGKLLFVHSAEGSEFWSALLEKAYAKVHGCYEALSGGSTIEGFEDFTGGISEVY------------------------------VLDKAPPN-----------------LFQVMQKALHLGSLLGCSID----------------------ITSSYETEAVTAR---------KLVKGHAYSVTGATEVNFRGRLVQLVRIRNPWG-------QVEWTGPWSDGSNEWDYVSDDEKSKLNHVAEDGEFWMSFSDFIRQFSRLEICNLTPDTL----------------LSDDVGHWNSY------QFEGMWRVGSTAGGCRNHAATFSSNPQFVVRLEDVDDDPMDGEDGCT---------------FLVGLMQKGGRQ--KKRLARDLE--TIGFAIYE---VPDQYKGRSNVHLGPDVLLRQRAVAMSSNFINTREVCDRFRLPPGEYAIIPSTFQPHKNGSFILRVFS 503
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Match: A0A183BSG1_GLOPA (Calpain catalytic domain-containing protein n=1 Tax=Globodera pallida TaxID=36090 RepID=A0A183BSG1_GLOPA) HSP 1 Score: 125 bits (313), Expect = 2.760e-25 Identity = 69/175 (39.43%), Postives = 102/175 (58.29%), Query Frame = 3 Query: 1269 LWEDSDFPVDQSSICLREGVISPSLPPPEAIRWLRPSEIAKGDQTVLFAGDFPGDGPIVPGQLADQWLLSAMAILTGRPHLLRLLF---QHTGQEDAGRYCIRLFKDANWIDVFVDSRVPCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDLTGGVAE 1784 L+ED DFP S+ S PPE+++WLRP EI + Q ++ G D ++ G+L D WL++A A LT R L + Q + AG + + ++ W+DV VD R+PCS++G++L+ H +E +E W L+EKA+AK +G YE L G T EAL D+TGG+ E Sbjct: 436 LYEDVDFPASDQSLFF-------SRRPPESVQWLRPGEIVREPQ-LITEGHSRFD--VIQGKLGDCWLMAAAANLTLRDELFYRVVPPDQSFTENYAGIFHFQFWQYGRWVDVVVDDRLPCSLEGELLYMHSRELNEFWSALLEKAYAKMYGSYEALKGGTTSEALEDMTGGLTE 600
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Match: A0A7N8XDK0_9TELE (Calpain-2 catalytic subunit-like n=9 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A7N8XDK0_9TELE) HSP 1 Score: 124 bits (311), Expect = 3.200e-25 Identity = 141/595 (23.70%), Postives = 230/595 (38.66%), Query Frame = 3 Query: 1254 IPNGTLWEDSDFPVDQSSICLREGVISPSLPPPEAIRWLRPSEIAKGDQTVLFAGDFPGDGPIVPGQLADQWLLSAMAILTGRPHLLRLLF---QHTGQEDAGRYCIRLFKDANWIDVFVDSRVPCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDLTGGVAEKLQWARFSASSTRMTLELQPRIQPDTSPASGKVGDATPCLRLTGWGLSAGETRSSGWIFDEMKNRISRGQVLGCSLQTWLRDPWEDQDEESNTPNQDDGVEMNRRRKAPSGRNGMLFPPSNRIMKGVSSWVAYCVLEAFETDKLRLVRLKDPWSGRFFGAQPGQYLGDWGPKSPLWSARPTLASELLPRT-LPGMFWMAFDTFVEVFNTLYAVDLAEDIEGQTTGGMANNNKQEKKLTNKRAHKSSAIGFREGRCEGRWE-GPMCGGRFTDGKGWLAGTQAFLQIEP--CSPKRSESAMTTPSAVKARNADKKANIYITLTQEDSRYHGKDYSTRDERRRSIGFLVHSHKWLAESVRGIPKLSKIVQNETKHVTCPFVPRRDVSIHLALPPGQYAILPTTLVPGTPGRFWVHVKS 3017 + +G L+ED FP + S+ E + P + W RP+E+ Q F D I G L D WLL+A+A LT +L + Q ++ AG + + ++ W+DV VD R+P D K+LF H E E W L+EKA++K +GCYENL G+T E D TGG+AE ++ A P L F M+ +S G +LGCS+ + +E + + +++KG + V + ++LVR+++PW ++ G W S W+ L R G FWM++ F++ F+ L +L D LT+ + S F EG W G GG + + + Q +++E P + T + L Q++ G+ + +IGF ++ ++ +VR P + +++ ++ F+ R+V LPPG+YAI+P+T P G F + V S Sbjct: 40 LKSGRLFEDDCFPAEAKSLGFNE--LGPYSSKTRGVVWKRPTELCSNPQ---FIQDGATRTDICQGVLGDCWLLAAIASLTLDKDILARVVPPEQSFTEDYAGIFHFQFWQFGEWVDVVVDDRLPTR-DDKLLFVHSAEGSEFWSALLEKAYSKVNGCYENLTGGNTIEGFEDFTGGIAEIY-----------------------------RLDKAPPKL------------------FHIMQKALSLGSLLGCSID--ITSAYETE-----------------------------AVTALKLVKGHAYSVTGAEEVHYRGKPVQLVRIRNPWG-------QVEWTGPWSDGSSEWNYITEDEKAKLSRVDEDGEFWMSYSDFIKHFSRLEICNLTPDT-----------------LTSDDVGRWSHHQF-----EGTWRIGSTAGGCRNNAATFSSNPQFVVRLEEEDDQPLDGKHGCT---------------FLVGLMQKE----GRKQKRLNRDLETIGFAIYEYQG-CNNVRLGPDV--LLRQRAVAMSSSFINTREVCDRFRLPPGEYAIIPSTFNPHRNGTFILRVFS 499
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Match: UPI001126640D (calpain-3 isoform X1 n=5 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI001126640D) HSP 1 Score: 124 bits (310), Expect = 5.510e-25 Identity = 152/606 (25.08%), Postives = 244/606 (40.26%), Query Frame = 3 Query: 1266 TLWEDSDFPVDQSSICLREGVISPSLPPPEAIRWLRPSEIAKGDQTVLFAGDFPGDGPIVPGQLADQWLLSAMAILTGRPHLLRLLFQHTGQ---EDAGRYCIRLFKDANWIDVFVDSRVPCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDLTGGVAEKLQWARFSASSTRMTLELQPRIQPDTSPASGKVGDATPCLRLTGWGLSAGETRSSGWIFDEMKNRISRGQVLGCSLQTWLRDPWEDQDEESNTPNQDDGVEMNRRRKAPSGRNGMLFPPSNRIMKGVSSWVAYCV--LE--AFETDKLRLVRLKDPWSGRFFGAQPGQYLGDWGPKSPLW-----SARPTLASELLPRTLPGMFWMAFDTFVEVFNTLYAVDLAEDIEGQTTGGMANNNKQEKKLTNKRAHKSSAIGFREGRCEGRW-EGPMCGGRFTDGKGWLAGTQAFLQI--EPCSPKRSESAMTTPSAVKARNADKKANIYITLTQEDSRYHGKDYSTRDERRRSIGFLVHSHKWLAESVRGIPK-LSK--IVQNETKHVTCPFVPRRDVSIHLALPPGQYAILPTTLVPGTPGRFWVHVKSADPN 3029 TL+ED+DF +++S+ + + P +W RP EI + Q ++ + I G+L D W L+A+A LT LL + H AG + + ++ NW+DV +D R+P D +++F R+E W L+EKA+AK HG YE L G T EA+ D TGGV E + ++ + R G C G G S G S + G ++ +Q+ + D D +S ++ K G + F R+ G+ AY V LE A++TDK++LVRL++PW G+ ++ G W +S W S + L ++L G FW++F+ F++ F L +L D S + EGRW G GG + Q L++ E P E + A+ +N K+ + L +IGF ++ + + + G + L K + N +K ++ R++S LPP +Y I+P+T P G F + V S N Sbjct: 67 TLFEDADFLANETSLFYSQHL-------PIKFQWKRPPEICENPQFIIGGANRTD---ICQGELGDCWFLAAIASLTLNEKLLFRVIPHEQNFTDNYAGIFHFQFWRYGNWVDVVIDDRLPTYND-QLVFTKSSHRNEFWSALLEKAYAKLHGSYEALKGGSTTEAMEDFTGGVTEFYEIKDAPKDLFKIMKKATER------------GSLMGCSIDDGRGFSYGLAPQS-----------NLGDLIARMMQS-VGDALVSTDLDSKGTDE----------KPALGIVPLRF--ETRMQNGLVKGHAYSVTGLEEIAYKTDKVKLVRLRNPW-GKV------EWNGSWSDRSKEWNVIEKSEKVRLQHDILE---DGEFWISFEDFMDNFTKLEICNLTADA----------------------LESDSLQVWTVSVNEGRWVRGCTAGGCRNYPDTFWTNPQYRLKLFEEDDDPDDKEVVCSFLVALMQKNRRKERKLGANLF-------------------TIGFAIYE---VPKEMHGNKQHLQKDFFLYNASKAKCKSYINMREISERFRLPPSEYVIIPSTYEPHQEGEFILRVFSEKRN 571 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig105.519.1 >prot_F-serratus_M_contig105.519.1 ID=prot_F-serratus_M_contig105.519.1|Name=mRNA_F-serratus_M_contig105.519.1|organism=Fucus serratus male|type=polypeptide|length=792bp MFDRLLPGGSPLLILRQRCAFALLCSASIGEKADFVHSLFDFRSEGDLNLback to top mRNA from alignment at F-serratus_M_contig105:536153..554503+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig105.519.1 ID=mRNA_F-serratus_M_contig105.519.1|Name=mRNA_F-serratus_M_contig105.519.1|organism=Fucus serratus male|type=mRNA|length=18351bp|location=Sequence derived from alignment at F-serratus_M_contig105:536153..554503+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig105:536153..554503+ >mRNA_F-serratus_M_contig105.519.1 ID=mRNA_F-serratus_M_contig105.519.1|Name=mRNA_F-serratus_M_contig105.519.1|organism=Fucus serratus male|type=CDS|length=4752bp|location=Sequence derived from alignment at F-serratus_M_contig105:536153..554503+ (Fucus serratus male)back to top |