|
Homology
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: D8LKH9_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKH9_ECTSI) HSP 1 Score: 311 bits (797), Expect = 1.410e-97 Identity = 152/203 (74.88%), Postives = 173/203 (85.22%), Query Frame = 1
Query: 250 GRSSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTRRSECDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTLAGRKCSS 858
GRSSVLS+T LDTP FRW+ L+K+ WQDP G +R WECAFR TR+SECDGVAV+VF+ YPVS KEDE++L+SQYRPPVA+EVIESPAGL+D GEDAK AERELLEETGFSGKVT VSPIV CDPGMTDA MRFVTIEV+GDSE+N+NP AR E+GEFITLRRLP SMQ GL+ GFQVDARLYAMA+GYTL R ++
Sbjct: 5 GRSSVLSTTNLDTPDFRWVSLRKILWQDPKGNNRVWECAFRNTRKSECDGVAVIVFVSYPVSKKEDEILLISQYRPPVASEVIESPAGLVDAGEDAKEAAERELLEETGFSGKVTSVSPIVPCDPGMTDANMRFVTIEVNGDSEENQNPKARPEDGEFITLRRLPATSMQEGLDEFANAGFQVDARLYAMAVGYTLGRRAAAA 207
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: A0A4D9CR14_9STRA (Nudix hydrolase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR14_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.640e-46 Identity = 91/195 (46.67%), Postives = 123/195 (63.08%), Query Frame = 1
Query: 262 VLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTRRSECDG------VAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALG 828
V+ + PGFRW+ LK+L + D G R WE A R RR+ +G V +V + + D +VLVSQ+RPPV EV+E PAGL+D+GED +A REL EETGF G VT VSPIV DPG+++A MR+V + +DGD N+ PVA +E E IT+ R+PV + +E + GF++DARLY +ALG
Sbjct: 4 VIKTEDHSAPGFRWVSLKRLQYCDARGRKRTWEMAERIQRRTASEGPPPANGVGIVAIISTSFAKDNDHIVLVSQFRPPVGKEVLELPAGLVDDGEDETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLNEVEGFREQGFEIDARLYGLALG 198
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: F0XWS1_AURAN (Nudix hydrolase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWS1_AURAN) HSP 1 Score: 173 bits (439), Expect = 2.030e-46 Identity = 97/184 (52.72%), Postives = 119/184 (64.67%), Query Frame = 1
Query: 292 GFRWLGLKKLTWQDPNGISREWECAFRPTRRSECDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKG-GFQVDARLYAMALGYTLA 840
GFRWL LKKL + D G R WE A R TRR DGV +V +R + VVLV+Q+RPP+ V+E PAGL+D GE A A REL EETGF G VT VSP+V DPGM+ A M+ V ++VDGD+ +N PVA EEGEFIT+ +P+A + L A +K G+ VDARLYA A G LA
Sbjct: 12 GFRWLRLKKLAYVDQTGRRRFWEMAERTTRRGAVDGVGIVAVVRRRACAPQ--VVLVTQFRPPLDGHVLELPAGLVDGGEGAGGAALRELKEETGFVGTVTSVSPVVASDPGMSAANMQLVVVDVDGDAPENLKPVAEPEEGEFITVLLVPLAGLAARLRAEMKARGYHVDARLYAYAAGLELA 193
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: A0A1X7QX37_9SACH (Similar to Saccharomyces cerevisiae YBR111C YSA1 Nudix hydrolase family member with ADP-ribose pyrophosphatase activity n=1 Tax=Kazachstania saulgeensis TaxID=1789683 RepID=A0A1X7QX37_9SACH) HSP 1 Score: 174 bits (442), Expect = 2.770e-46 Identity = 92/214 (42.99%), Postives = 133/214 (62.15%), Query Frame = 1
Query: 202 IGRYSMSFSSVLVAPQGRSSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTRRSE-CDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTLA 840
I + +S ++V AP+ + S+ D +W+GL+KLT+ DPNG+ REW+CA R TR S DG+ ++ L+Y G D+V+L Q+RPPV IE PAGL+D E + A REL EETG+ GK+T SPI+ DPG T+ M +T+EVD +N+NP +LE+ EFI ++P A++ LE L K G+++DARL +A G +A
Sbjct: 18 ISKQFISMTTVKGAPERAKLISSAPVTDPNSCKWIGLEKLTYTDPNGVQREWDCAVRKTRNSGGVDGIGMLTILKYK-DGTPDQVLLQKQFRPPVDGVCIEVPAGLVDANESLETAALRELREETGYIGKITSKSPIIFNDPGFTNTNMSLMTVEVDMSLPENQNPQTQLEDNEFIECFKVPFANLNNELEKLYKQGYRLDARLQNVAHGIEIA 230
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: W0TG34_KLUMD (ADP-ribose pyrophosphatase n=1 Tax=Kluyveromyces marxianus (strain DMKU3-1042 / BCC 29191 / NBRC 104275) TaxID=1003335 RepID=W0TG34_KLUMD) HSP 1 Score: 166 bits (420), Expect = 2.300e-43 Identity = 90/200 (45.00%), Postives = 123/200 (61.50%), Query Frame = 1
Query: 244 PQGRSSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTR-RSECDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTLA 840
P+ + S +T +W+GL KLT+QDPNG +REW+ A R TR DGV ++ LR+ K DE++L Q+RPPV IE PAGL+D GED + A REL EETG+ GK+ SP++ DPG T+ + VT+ VD +N+NPV LEE EFI +P+ASM L L K G+++DAR+ +ALG +A
Sbjct: 22 PELAKLLSSRPVTNTEECKWIGLTKLTYQDPNGKTREWDSAIRMTRSEGGVDGVGILAILRF--KDKPDEILLQKQFRPPVEGVCIEMPAGLIDGGEDIETAAMRELREETGYVGKILHSSPVIFNDPGFTNTNLSLVTVLVDMSLPENQNPVTELEENEFIECFSVPLASMADELAKLDKEGYKLDARVQNVALGIKIA 219
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: A0A507BWH5_9FUNG (Nudix hydrolase domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BWH5_9FUNG) HSP 1 Score: 165 bits (417), Expect = 3.390e-43 Identity = 86/194 (44.33%), Postives = 122/194 (62.89%), Query Frame = 1
Query: 256 SSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTRRSECDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTL 837
+ ++S + +W+ LKK+T+ DP G R WE A R +R+ + D V ++ L+ P K E VLV+Q+RPPV A+ +E PAGL+D+GE A+ A REL EETGF GK S I+ DPGM++A M+FVT+EVD +N +P A +EGEFI + +P+ + G L+ + GF+VDARLY A G L
Sbjct: 4 AKIISKEPMKDEDAKWVKLKKITYSDPAGKIRLWESAERTSRKGDIDAVGILALLKMP--NKPTETVLVTQFRPPVGAQCVEMPAGLVDKGETAEQAAVRELREETGFIGKAIRSSEIMDSDPGMSNANMKFVTVEVDRTLPENHSPKAEPDEGEFIDIHIVPLVGLLGTLKGFISKGFKVDARLYHFAEGLDL 195
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: Q6CVU6_KLULA (KLLA0B09306p n=2 Tax=Kluyveromyces lactis TaxID=28985 RepID=Q6CVU6_KLULA) HSP 1 Score: 164 bits (415), Expect = 1.100e-42 Identity = 90/200 (45.00%), Postives = 122/200 (61.00%), Query Frame = 1
Query: 244 PQGRSSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTR-RSECDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTLA 840
P+ + S DT +W+GL+KLT+QDPNG REW+ A R TR DGV ++ LRY S K DE++L Q+RPPV IE PAGL+D GE + A REL EETG+ GK+ +PI+ DPG T+ + VT VD +N+NPV+ LEE EFI +P+ASM + L + G+++DAR+ +A G LA
Sbjct: 21 PELAKLLSSKPVSDTSDCKWIGLRKLTYQDPNGKVREWDSAVRLTRSEGGVDGVGILAILRY--SDKPDEILLQKQFRPPVEGVCIEMPAGLIDGGESIETAALRELKEETGYVGKILHATPIIFNDPGFTNTNLSLVTAIVDMSLPENQNPVSELEENEFIECFTVPLASMADEMAKLAEQGYKLDARVQNVAQGIKLA 218
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: A0A4Q9QG04_9APHY (NUDIX hydrolase domain-like protein n=3 Tax=Dichomitus squalens TaxID=114155 RepID=A0A4Q9QG04_9APHY) HSP 1 Score: 162 bits (410), Expect = 3.360e-42 Identity = 94/205 (45.85%), Postives = 125/205 (60.98%), Query Frame = 1
Query: 256 SSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTRRSE-CDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGF-SGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTLAGRKCSSLP 864
S VLS L T +W+ LKK TW+DP+G R WE A RPTR S D VA++ LR + +++ Q+RPPV V+E PAGL+DEGE A+ A REL EETGF + V SP++VCDPGMT+A M+ VT++V EK + P +LE GE+IT R + ++ + + L GF VDARL MA G+ LA R + P
Sbjct: 4 SKVLSVEDLQTSEAKWVKLKKCTWRDPDGKERPWEFATRPTRGSGGVDAVAILAILRSESNAFPPSTIIIEQFRPPVERYVVELPAGLIDEGESAEGAAIRELEEETGFKASSVIQTSPLLVCDPGMTNANMKLVTVDVPFP-EKLEMPAQKLEPGEYITARIVELSKLAAEFKGLSSIGFVVDARLSHMASGFELAERLRQAKP 207
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: A0A0D7BB00_9AGAR (Nudix hydrolase domain-containing protein n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7BB00_9AGAR) HSP 1 Score: 160 bits (406), Expect = 1.280e-41 Identity = 93/201 (46.27%), Postives = 125/201 (62.19%), Query Frame = 1
Query: 250 GRSSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTRRSE-CDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSG-KVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTLAGR 846
G+ VLSS L T +W+ LKK+T++D G R WECA R TR+S D VA++ ++ + V++ QYRPP+ A V+E PAGL+DEGE A+ A REL+EETGF ++ SP++V DPGMT+A M+ V + V E + P A+LE GEFIT R + +A + L+A K GF VDARL A GY LA R
Sbjct: 3 GQPKVLSSVDLPTDQAKWISLKKITYRDAEGKERPWECAERRTRKSTGVDAVAMLAMIKSKTNAFPLSTVIIEQYRPPIDAFVVELPAGLIDEGESAEDAALRELVEETGFKAERIIESSPVIVSDPGMTNANMKLVLLSVTLPGEM-ETPEAQLEAGEFITKRVVALADLNEELKAYDKRGFVVDARLSHFAQGYDLARR 202
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: A0A0A8L2H8_9SACH (WGS project CCBQ000000000 data, contig 00053 n=1 Tax=Kluyveromyces dobzhanskii CBS 2104 TaxID=1427455 RepID=A0A0A8L2H8_9SACH) HSP 1 Score: 159 bits (401), Expect = 5.720e-41 Identity = 87/182 (47.80%), Postives = 116/182 (63.74%), Query Frame = 1
Query: 298 RWLGLKKLTWQDPNGISREWECAFRPTR-RSECDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTLA 840
+W+GLKKLT+QDPNG REWE A R TR DGV ++ LRY + K DE++L Q+RPPV IE PAGL+D GE + A REL EETG+ G + SPI+ DPG T+ + VT+ VD +N+NPV+ LEE EFI +P+ASM + L K G+++DAR+ +A G +A
Sbjct: 22 KWIGLKKLTYQDPNGRVREWESAERLTRSEGGVDGVGILAILRY--ANKPDEILLQKQFRPPVEGVCIEMPAGLIDGGESIEIAALRELKEETGYVGDIINSSPIIFNDPGFTNTNLSLVTVIVDMSLPENQNPVSELEENEFIECFTVPLASMAEEMAKLDKQGYKLDARVQNVAQGIKIA 201
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 311.2 |
Seed ortholog evalue | 4.5e-82 |
Seed eggNOG ortholog | 2880.D8LKH9 |
Preferred name | ndx-2 |
KEGG rclass | RC00002,RC00004,RC00010,RC00039,RC02725,RC02798 |
KEGG ko | ko:K00652,ko:K01515,ko:K01915,ko:K13987,ko:K14400 |
KEGG Reaction | R00253,R01054,R03210,R10124,R11553 |
KEGG Pathway | ko00220,ko00230,ko00250,ko00630,ko00780,ko00910,ko01100,ko01120,ko01230,ko02020,ko03015,ko04217,ko04724,ko04727,map00220,map00230,map00250,map00630,map00780,map00910,map01100,map01120,map01230,map02020,map03015,map04217,map04724,map04727 |
KEGG Module | M00123,M00573,M00577 |
Hectar predicted targeting category | other localisation |
GOs | GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009132,GO:0009134,GO:0009185,GO:0009191,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047631,GO:0055086,GO:0071704,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 |
EggNOG free text desc. | ADP-glucose pyrophosphohydrolase activity |
EggNOG OGs | COG0494@1,KOG3041@2759 |
Ec32 ortholog description | NUDIX hydrolase domain |
Ec32 ortholog | Ec-16_003020.1 |
EC | 2.3.1.47,2.7.7.96,3.6.1.13,3.6.1.58,6.3.1.2 |
COG Functional cat. | L |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002,ko01000,ko01007,ko03019,ko03021,ko04147 |
Exons | 7 |
Model size | 2271 |
Cds size | 789 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928876.6054385-UTR-F-serratus_M_contig105:490748..491341 | 1622928876.6054385-UTR-F-serratus_M_contig105:490748..491341 | Fucus serratus male | UTR | F-serratus_M_contig105 490749..491341 - |
1690962610.9369984-UTR-F-serratus_M_contig105:490748..491341 | 1690962610.9369984-UTR-F-serratus_M_contig105:490748..491341 | Fucus serratus male | UTR | F-serratus_M_contig105 490749..491341 - |
1622928876.6266513-UTR-F-serratus_M_contig105:491363..492036 | 1622928876.6266513-UTR-F-serratus_M_contig105:491363..492036 | Fucus serratus male | UTR | F-serratus_M_contig105 491364..492036 - |
1690962610.94776-UTR-F-serratus_M_contig105:491363..492036 | 1690962610.94776-UTR-F-serratus_M_contig105:491363..492036 | Fucus serratus male | UTR | F-serratus_M_contig105 491364..492036 - |
1622928876.7546983-UTR-F-serratus_M_contig105:498462..498678 | 1622928876.7546983-UTR-F-serratus_M_contig105:498462..498678 | Fucus serratus male | UTR | F-serratus_M_contig105 498463..498678 - |
1690962611.022356-UTR-F-serratus_M_contig105:498462..498678 | 1690962611.022356-UTR-F-serratus_M_contig105:498462..498678 | Fucus serratus male | UTR | F-serratus_M_contig105 498463..498678 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928876.643585-CDS-F-serratus_M_contig105:492036..492203 | 1622928876.643585-CDS-F-serratus_M_contig105:492036..492203 | Fucus serratus male | CDS | F-serratus_M_contig105 492037..492203 - |
1690962610.9557023-CDS-F-serratus_M_contig105:492036..492203 | 1690962610.9557023-CDS-F-serratus_M_contig105:492036..492203 | Fucus serratus male | CDS | F-serratus_M_contig105 492037..492203 - |
1622928876.663736-CDS-F-serratus_M_contig105:496342..496464 | 1622928876.663736-CDS-F-serratus_M_contig105:496342..496464 | Fucus serratus male | CDS | F-serratus_M_contig105 496343..496464 - |
1690962610.965004-CDS-F-serratus_M_contig105:496342..496464 | 1690962610.965004-CDS-F-serratus_M_contig105:496342..496464 | Fucus serratus male | CDS | F-serratus_M_contig105 496343..496464 - |
1622928876.6830606-CDS-F-serratus_M_contig105:496655..496724 | 1622928876.6830606-CDS-F-serratus_M_contig105:496655..496724 | Fucus serratus male | CDS | F-serratus_M_contig105 496656..496724 - |
1690962610.9743323-CDS-F-serratus_M_contig105:496655..496724 | 1690962610.9743323-CDS-F-serratus_M_contig105:496655..496724 | Fucus serratus male | CDS | F-serratus_M_contig105 496656..496724 - |
1622928876.7037385-CDS-F-serratus_M_contig105:497053..497208 | 1622928876.7037385-CDS-F-serratus_M_contig105:497053..497208 | Fucus serratus male | CDS | F-serratus_M_contig105 497054..497208 - |
1690962610.9837995-CDS-F-serratus_M_contig105:497053..497208 | 1690962610.9837995-CDS-F-serratus_M_contig105:497053..497208 | Fucus serratus male | CDS | F-serratus_M_contig105 497054..497208 - |
1622928876.7219973-CDS-F-serratus_M_contig105:497558..497720 | 1622928876.7219973-CDS-F-serratus_M_contig105:497558..497720 | Fucus serratus male | CDS | F-serratus_M_contig105 497559..497720 - |
1690962610.9952435-CDS-F-serratus_M_contig105:497558..497720 | 1690962610.9952435-CDS-F-serratus_M_contig105:497558..497720 | Fucus serratus male | CDS | F-serratus_M_contig105 497559..497720 - |
1622928876.7359874-CDS-F-serratus_M_contig105:498348..498462 | 1622928876.7359874-CDS-F-serratus_M_contig105:498348..498462 | Fucus serratus male | CDS | F-serratus_M_contig105 498349..498462 - |
1690962611.012327-CDS-F-serratus_M_contig105:498348..498462 | 1690962611.012327-CDS-F-serratus_M_contig105:498348..498462 | Fucus serratus male | CDS | F-serratus_M_contig105 498349..498462 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig105.516.1 >prot_F-serratus_M_contig105.516.1 ID=prot_F-serratus_M_contig105.516.1|Name=mRNA_F-serratus_M_contig105.516.1|organism=Fucus serratus male|type=polypeptide|length=263bp
MSFSSVLVAPQGRSSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECA FRPTRRSECDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGL MDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEV DGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYA MALGYTLAGRKCSSLPTLVTFNRRSIRCNLEPQRLWNVCGARVGAYCTPM AHAGILAQIRAH* back to topmRNA from alignment at F-serratus_M_contig105:490749..498678- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig105.516.1 ID=mRNA_F-serratus_M_contig105.516.1|Name=mRNA_F-serratus_M_contig105.516.1|organism=Fucus serratus male|type=mRNA|length=7930bp|location=Sequence derived from alignment at F-serratus_M_contig105:490749..498678- (Fucus serratus male) AGCTCCCGCAGAGGAGTACATCATTTGTTCCTCAAGCTGGTGTGCAACCG
GACGAAAGAGACGATACACGCTAAGACATCTGCTACATTAGCCACAGCAC
AGTCTCGCTGCCGCTTCGCCGTTCAAAAGATCGCACCAGGAAGATTTCGT
GCCTTCTGACCCAGGCGTGGGGATTGTTAAATTGCCACTCTCTCGAAGGC
GATAGGGAGATACAGCATGTCATTTTCCTCTGTTCTAGTCGCACCCCAGG
GTCGATCTTCGGTCCTATCGTCGACTACCTTGGACACCCCGGGTTTCCGT
TGGTTGGGTCTCAAGAAGCTGACGTGGCAGGTGGGCTTACTTCCTACCTC
GCTCCGACAAAGCCACGCATCGATAGTCCCGCGCTGAAAGATTCTTGGAA
CGATACGGCAATAAAAAAAACATGTACTTACTTGGTGCAGTAGTCTAGAC
AGTTAACATGTAAAAGGGAAGATCTCCCAATCCGGAGAGGTCAACACGTA
TGCAGGCGGCACTTCGTTTGCTCGAGGCTGACAACGCGCGCGGTCGGGAG
GATGCATGCACATGGTTCACAGTAGCTACCTCCTCAATTTGTCATTGGCA
AAATGATGGATGGAATATTTATACCCCTACTTGGCGTTTGAGGTAGCGAT
AAAAAAAAACAAAGGTGGGTTCGTAAGCTCGTGAATGGCGGGCATGACAC
ACAATAAGCTTTCGGGCGTGAACATCTCTCCAGACTCGGAAGGAAAGTAA
TTGAGCCCGCCCGCATGGCTAGAGTATAGTCTAACCTGATATATTTTTCA
CTGGAAAGAGGCTCAAGAAATCGCTCCTTTCACGGGTGTACACGTAGAAC
CGGCGCCAGGAGGAATTCCCCCCCCCCCAGTTACATGCCTACCACATTAA
TGCCGTCTTCTGCCAACGCTCTCCTCCCCCGGACACACTACTTGAACATG
TTTCGCAGGACCCGAACGGTATCAGTAGGGAGTGGGAGTGCGCCTTCCGT
CCAACGAGGCGCTCGGAATGCGATGGCGTTGCGGTGGTCGTCTTTTTGAG
ATACCCCGTGTCGGGCAAGGAGGACGAGGTGGTGTTGGTGTCGCAGTACA
GGCCTCCCGTCGCAGCCGAGGTGATTCCCTCTACGATATCTGTATGGCTG
AGAAGCCTCGTTCCTCGTAAAGGGGGAAATCGATCATACCTTTGACTTGC
AAATGGGGCTGTTTTTTTAACTTTGATTTAGTAATGCAGCCCGTACCGGT
CTTGTACACGAGACTCGGGTGACATTCCCACATGAAATAATTTATTGCAT
TGCAGACTAAACGTTCAGAGGGAAATAGCTGTGGGGCCATACGCTCGAGC
GGCCTGTGACCTCCTCCAAGTCAGCATATGTATCGTGCGCCAAATGCGAC
CAGTTTTCTGGGGAAGAATGATCCCATTCCACCAACAACATCGTGGTATT
ATCTGTCCTGTCCGGGCAAGGTAATCGAATCCCCTGCTGGACTTATGGAC
GAGGGGGAAGATGCCAAGGCGACGGCGGAGCGGGAGTTGCTCGAAGAGAC
TGGCTTCTCGGGCAAGGTCACCTTTGTATCGCCGATCGTGGTGTGTGATC
CGGGTATGACCGACGCAATCATGCGGTGAGTCGACCTGGCGAATGGAAGG
GAATCATGATTAGAGGTGTTCCTGTGAATCGAGTGTGTCCGTCGATTTCT
CAAAGCTTCTGTAATGCTCTGGGGGGCTTACACGACGTTCAACAGCTTCA
ACCGAGAAATGGTTTGATATCCGTTAAACGGAAGAACGAAAGAGAGACGA
CCGTGGAAGTCTCACAAGGTCGCGCTGAGAAAATTTGGAGAGAGGCACGG
CATTGAAACCTAACGACAGATAGGAGGATCCCCTTGCGTAGGACTAATGA
TTATTTTTGCCTCCCGGCGCTCTGTGCCGTGTCGACACCATTATTACCAC
GCAGGTTCGTGACAATCGAGGTCGATGGGGATTCGGAGAAGAACAAGAAT
CCGGTTGCACGCCTAGAAGAAGGGTACGTGAACGTTTGCCTTGCGTTCCC
GAGTGATCGTGCTGCGCGTGTAAAAACGTATCGTCCTTGCCCGCGCGCTG
GTTACCTCCACGGAAAAGAGTTCGAGGAAGTTTCCTCGTCAAAAGCTGGT
TACGACCGCCAGAAAAACAGGTCTCTGCTACTGCTACTGCTGTGCCCTTG
CTCTATCTATCCAGGGAGTTCATAACCCTGCGGAGGTTGCCGGTGGCCTC
GATGCAAGGAGGCTTGGAGGCTTTGGTCAAAGGCGGTTTCCAAGTGGATG
CGCGCCTCTACGCGATGGCGCTGGGTTACACGCTCGGTAAGAGCGCGATT
CCAACCACCGGCGGAGGCTGGTGTCGCAGGTGGTCTCGCAATCCAATGAT
GAAGTATGTGTTGATTGCTTCTACTGTCGTAACAGCGACGGCTTTGGTGG
TGGGGACGCTCGGAGGAATACGGCGGAAGGGGATGTGAATATAACGCGCA
AGTACGAAACCTGTGTATACAAAGAAAATATGCGCTACTGAACGCCGCGA
GCTATGGAACGTAATGGATGATTGTGATCGAGGAAGAAGACCAAAGGTCA
TAAAAAAAACTACGCTCAAGGGGTAGTAACACAAGAAGTTCGAACGCTAT
TCATAGAATCTCCGGCGACAACATTTCACCGGAGATTTATTGGTCTGCAG
TAATATTTTTGGATATCGATACCACCCGTGGAAGTACTGTACGCTGTAAG
TGAAGATCGAGTCAGTGACGTACCAGGCACGCCACTCCCATAATACAGTA
GTAGCTGTGGTGCTTTCCGTTGGGCAGCGAGTCGCAAGCACTACTTCACA
CAGGTTCATTTCAAAGCTATTTTACGTGTTGCAGAAAGGAGAAAGTTCTA
CGCGCACGTGTCGTTTTTCTTTATTTGTTGAAGAGCTTAACGTTGGTCGC
ACCTCCTCTGGACATTGGATTTCACGAGGCTAGTATGGTTCAGCTTTCTG
CCGTGCAGCACGGCTACCTCTTCTACTCATCGTGTGCTCAGGATAGCTCT
TACGCGAAAGGGATCGTTGGAGTTGAAGCTCTCGCACGAATGATGAGTGG
TTTTCTGAACCCTCTCTATTATTGTAGTCGTTTGTATGTTCTCCCGACTC
TTTTTCGATGCCGTACACGTGGATTTCAGGCACACCTGGTCCTCCAGCAC
GATGTACTACCTTTTGTGGTCCATCTGCATCCTACGAACGCACCGTACAA
AAATATGCTGCTTGTAAACATTTCAATTTAAGGCCTTTTCGTCAGACCGC
TAGTTAGTTCCCGCTCATTCTATAGAAGAGCGGAGCCCTGTAGTCTATTA
CAACTCGTGCCCATGGGGTTACCAGCCATATGTTTAAAGAAAAATCTGAA
CGCGCCTAGACCTTCTGTTCAAAGAAGTTAGGGTGGCCAGTTCCTTGGAC
AATCTGCATTCTCTCAATCTGCATTCTATCTGCAGACCTTAATCCCAAAG
TTCAAGTCGCCTCGTGAGTCTCTCCGAATTGAGGTCGGCTTCTGTCAGAA
TTCGCGTCCATTCAACTTCTATTTTCATTGCCGTCTGGATAGTGGATACT
ATTATTAATAATATAATACCTGGTGGTCGATAATATTAGTCGTATCGAAA
GGCGAGTTGCGATCTGCGCACACACGTCTGTTACGTTGGCAAGATGTGTA
CGCACAATAAGTTCATTCAAACACTACTACTATAATATTGAACTGTGCGT
AAAACACTGCACTTCCTGTGTGTGCATCGCCGAACGACGAGCTGATTGCG
TCGACTTTTTTCCAAGAGTCGCTCTTATTCCTTTTTTATTGTCCCAGTCG
TTTCTAGAACGTTCGCGTTTTGCCCTTACAGCCGACGCACAAGAACAACA
GCAGTTACTACAACACCAGTTGGTCTCTGAGGGCACCATCACAAACATTT
CCGAATGAATCCTGCGAGTGGACTGCTGGAAGTCCCCCGCGAAGGTTCGT
TCATGGCAGACATCTTCGAGTTACGTGACGTCATAATTATGCGGATCCCT
CGTTATACGCCCGACATTGTATGTCACGTTGGAAGAAAAAAAACAAACTT
ATTCTAAGTTCAACGCTGCTTCCAAGAACAAATGATCGCCACGTGTGTGC
GTGTGAGAAAAATCTGAACGCATCTAGACCTTTTGGCCACCCCACAGTCA
GGGGGGGGAAAGGTCAAAACGCTTGCTGCTTAGGTGGGATCATAGGCTGC
AACGCCAAAACCTCTTCATAGCACTTAATCGGGTTCCCCGATGATGATGG
TAGTAACATTGGGTCAACGTTATCACGGAGAGAAAATTAAATTGCAAATG
AGGGTGAAACCCGGCCCTGTCATTGTCTTATTCAATACTGCTGTAGTCAT
TCTATACTCCTCGCATTGACTCTCCCATCAAAAAAGGTGTGTGTGTGTGT
ATGTGTGTGGTGTGTGTATTTATCAAATTGCACATATGACCGCGCAGTCC
GGACCACCTGTCGTCCTAGTCATTTTATGTAGTACCTGGTATTATGTGTT
AGTGAGAGCGATCAAGTCCAGCAGATTGGTGACGTGTACCGGGTACGGTT
CCCGACAACAATAAAATAATACAAATTATTACAATATTATTACTCCTTGT
GATCAGCTGAACAGAGAAAACGGATTTCCCCTGCCGTCCCCGTCCGCGCC
GCCTACGAATTCGTCCCGCGAGAGAGGTTGTTCCGCTGCTGCCGCCCCGT
CCCGCGTCAGCCCCCTCATTCTCCACACACCACCCAGCGTGAATCTGGTG
GTAAGATCTAACTAAGAAGGGGCGCAAACGACAACGCAACGCGGCTATGG
CGTTGTTTCGTTGCAAAAAAAAAGTACTGGACCAGGTGGTGGTGTAAAAT
ATTAGAAGAAGACTAACACCTAGCAAACAGTTTGAAATGGATGCCATGTG
GTGGCGTGCACTGAGGGGATGGAAACATAGAGGCGCAGATTGATTGATTG
CTGGTACATGGTGAAACCTGAAACGATAGCACCCGTTGTTACTGGAACTA
CTACTTTTTTTAGGAATACTTGCCCTGTGCCGGCGGACTCTCGGCAGTGC
ACACCGTCGGGAGACAAAACTACATACTCTAATATTTAGTAGAAAACACT
CTCTTCTGCACAGTCAAGGGTGTCGTCAGGTCGGAAAAGCGTACGTACGT
ACTTCAGTTCCAACACGAAACTAGTTGTGCAAGCAGGACTCTCTCTCTTA
CGTCGAGGATTGAGAGGAGGGAAGAGCCCCTGGACGGGCCGCTGCGAAGA
AGGTGTCGCATGCGGTGGAACAGCCTACTGCGCTGCACAATGATTATAAT
TATATATATATATATATATATATATACGGAAGCATTCTCTGTACAGCTGT
GTAATCCTCCAGCGCCCTGCGCTCTCCACTCCGCTTCCTGGTGCGGTGTG
TGTAGAGTCACAACTTTTAGATGTAGATAGACAGCTGTGGTGTGATTTAT
GGCATACAGTATACCAGGTACAGTATATATCCCATATATTATGCTTGACG
AGCATGCCATACACCACTATTACTTGGTGATACTATGTAATAATCGAATC
ATGCGCGGTGTACGTCGTAGTCTGCTACCAGGTATTTAAGATTACTGTAA
TAATATTATCAGATGATCAAAACCTCTCTCTCTCTCTGTGTAAATGAAAC
CAGAACAGTTGCCCCCCGCCCAGTCCGACAGGATAAGCATCGGTGATTTC
CTCGCAGACTACATCACGGATCGATCGAGGGAAAAGAAATTGACCCCACC
GAACAATTCCTGTCTCTTCAACATTATTCGGTGCACCTTCTCCTCATCAT
TCTGCCGTACCTACTGTTTGTGGTCAACAGTAAGTATCAGTAATTATTGT
ATTTCATTTTTTTCTCGGCGTTTTTTATGCGGACATATTATCCTGTTTTG
TACGGAGCCGCACGACTCCAGCGACCACTCACACCCTTCTCCGGCAGGTA
CTCATACTATAATACACTCATACTATAATACACTCATACTATAATACACT
CATACTATAATACACTCATACTATAATACACTCATACTATAATACACTCA
TACTATAATACACTCATACTATAATACACTCATACTATAATACACTCATA
CTATAATACACTTATACTATAATGCACTCATACTATAATACACTCATACT
ATAATACACTCATACTATAATACACTCATACTATAATACTTGCTTGTCTC
GGAGAGTCGCCGGAGACGATGGCGGCAGTTAGTACACTGTATTGTAATCC
GCCATTTTATTTCCACGTTGCCATGAGAGCTCGCAGTCGGGGGTGTGGTA
TGATGACGACGCAATCCTCGGTGTGGTTCGAGGAGGTGGTGTAGGAACTC
TGCGCCAGCCAGTAAGGATGCCTGCAAAATAATTTCTCTGATATATATAC
CCCTCGTTGCCCTTCATCGTTTCAGCAGGACGCAAATGTTCCTCCTTGCC
GACCTTGGTCACCTTCAACAGGAGGAGCATTCGGTGTAACCTGGAACCAC
AACGGCTCTGGAATGTTTGCGGCGCTCGCGTGGGGGCATACTGTACGCCG
ATGGCCCATGCCGGTATTCTCGCGCAGATTAGAGCTCACTAGATGGACCG
AGATTATCCTTGCTAAATACTCAGGCGCATTCTGTCTACAACAGAATACG
TGCCGATTCCGTGAGCGCCGGTAACGCCGGATAGATGTGACCGTCGAGAG
ACCATGATAGCAACACCTGGCTACCTTGGTCTTCGAAATGACTCAGACAG
GTGGCTACCAAAACCTGACCGCTGAGGTTTTACCGACCGGTTGTTTCGGG
ATGTATGACCACCAAGGGGGGCGCAGCTGCATCATCTATACGAGACGAGG
AGCGGAGTGAATCAGACGAAATAACAGGAGAGAGGAAGACATCTCGTCAT
GATCGCACCGGCAATGACTACCGGAGAATTTAAAGCTTTGATGGTGGGCC
ACCTCAAGGATATCTTACGCGGGGCCGGCTCCGCCTGGAGGGAGGCCTGA
GAACCCGCGAGTTGTCGCGAAAATCAAAATGTCTTTGAGTGTTATAACTC
TACACTACTCGTGTCAAGCTCTATACTTTATTTTGGTCGTCGGGTATGTA
CTTCCTTGTTTAGACGAGTGGTCGTGAAAAGGAAAATGTCTTCGAATGTT
ATAACTACTCTATACTACTTCATGTCGAGCTCTGTACTTTAGTCGTATCG
CGTGTACTTCCTTGTTTAGACGCGTGGTGGCAGATATCGTTTGTGGGGGT
CGTAGCATGCTGCGCGCATAACCTGATCATGATACAGTAATCAAAACGCT
TTAGAGAGTGCATTTACCTTGTATATTCTACTGTTCATATGTTCCTTGCG
AAGGTTTTATCTGTTGTGGGTCGGGCATGTTTGTTGCGCCCGACCCCTCT
GTTTTTGTTTACACTTGTATAATTTTATCGTGTGTTTTGCTTTATTTCAC
TATAACTATTGCCTGTCTTTCTTGTCCGCCTCCTTCGAGATTGTGTCTTG
TTATTCAGCGAACGAAGTTTTAGGGAAATCGAAATCGATGATTGACTGAT
CGACGAAGCTGGGAAAAACAAAGAAGACACTGTAAGGGTCCAGGACGGTC
AAAAATTAGGGAGAGCACTCTGGGAAAGGTTTGAAGGGCTACAGAGTATT
TACACCCAAGCCAAGCAGGGGTTTGTCACGTTGAGTAAGAATGTGATACT
TCTGGTGGCGTTGGGGGCTTGGAATCAACCACGAACTACAAACGAGCCTT
GTGCCAAACATTAGAAGAATTGCTGCGAGGGGGCATCGAGGCTTCAAAAG
GGCCTAGAGGGTGGCTATTGGATAAAGACACTGGAGTATATCGTGATAAA
GTAAACAAAGGAGAAGACGCCGCATTAGGC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig105:490749..498678- >mRNA_F-serratus_M_contig105.516.1 ID=mRNA_F-serratus_M_contig105.516.1|Name=mRNA_F-serratus_M_contig105.516.1|organism=Fucus serratus male|type=CDS|length=1578bp|location=Sequence derived from alignment at F-serratus_M_contig105:490749..498678- (Fucus serratus male) ATGTCATTTTCCTCTGTTCTAGTCGCACCCCAGGGTCGATCTTCGGTCCT ATCGTCGACTACCTTGGACACCCCGGGTTTCCGTTGGTTGGGTCTCAAGA AGCTGACGTGGCAGATGTCATTTTCCTCTGTTCTAGTCGCACCCCAGGGT CGATCTTCGGTCCTATCGTCGACTACCTTGGACACCCCGGGTTTCCGTTG GTTGGGTCTCAAGAAGCTGACGTGGCAGGACCCGAACGGTATCAGTAGGG AGTGGGAGTGCGCCTTCCGTCCAACGAGGCGCTCGGAATGCGATGGCGTT GCGGTGGTCGTCTTTTTGAGATACCCCGTGTCGGGCAAGGAGGACGAGGT GGTGTTGGTGTCGCAGTACAGGCCTCCCGTCGCAGCCGAGGACCCGAACG GTATCAGTAGGGAGTGGGAGTGCGCCTTCCGTCCAACGAGGCGCTCGGAA TGCGATGGCGTTGCGGTGGTCGTCTTTTTGAGATACCCCGTGTCGGGCAA GGAGGACGAGGTGGTGTTGGTGTCGCAGTACAGGCCTCCCGTCGCAGCCG AGGTAATCGAATCCCCTGCTGGACTTATGGACGAGGGGGAAGATGCCAAG GCGACGGCGGAGCGGGAGTTGCTCGAAGAGACTGGCTTCTCGGGCAAGGT CACCTTTGTATCGCCGATCGTGGTGTGTGATCCGGGTATGACCGACGCAA TCATGCGGTAATCGAATCCCCTGCTGGACTTATGGACGAGGGGGAAGATG CCAAGGCGACGGCGGAGCGGGAGTTGCTCGAAGAGACTGGCTTCTCGGGC AAGGTCACCTTTGTATCGCCGATCGTGGTGTGTGATCCGGGTATGACCGA CGCAATCATGCGGTTCGTGACAATCGAGGTCGATGGGGATTCGGAGAAGA ACAAGAATCCGGTTGCACGCCTAGAAGAAGGGTTCGTGACAATCGAGGTC GATGGGGATTCGGAGAAGAACAAGAATCCGGTTGCACGCCTAGAAGAAGG GGAGTTCATAACCCTGCGGAGGTTGCCGGTGGCCTCGATGCAAGGAGGCT TGGAGGCTTTGGTCAAAGGCGGTTTCCAAGTGGATGCGCGCCTCTACGCG ATGGCGCTGGGTTACACGCTCGGGAGTTCATAACCCTGCGGAGGTTGCCG GTGGCCTCGATGCAAGGAGGCTTGGAGGCTTTGGTCAAAGGCGGTTTCCA AGTGGATGCGCGCCTCTACGCGATGGCGCTGGGTTACACGCTCGCAGGAC GCAAATGTTCCTCCTTGCCGACCTTGGTCACCTTCAACAGGAGGAGCATT CGGTGTAACCTGGAACCACAACGGCTCTGGAATGTTTGCGGCGCTCGCGT GGGGGCATACTGTACGCCGATGGCCCATGCCGGTATTCTCGCGCAGATTA GAGCTCACTAGCAGGACGCAAATGTTCCTCCTTGCCGACCTTGGTCACCT TCAACAGGAGGAGCATTCGGTGTAACCTGGAACCACAACGGCTCTGGAAT GTTTGCGGCGCTCGCGTGGGGGCATACTGTACGCCGATGGCCCATGCCGG TATTCTCGCGCAGATTAGAGCTCACTAG back to top
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