mRNA_F-serratus_M_contig105.516.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig105.516.1
Unique NamemRNA_F-serratus_M_contig105.516.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: D8LKH9_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKH9_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 1.410e-97
Identity = 152/203 (74.88%), Postives = 173/203 (85.22%), Query Frame = 1
Query:  250 GRSSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTRRSECDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTLAGRKCSS 858
            GRSSVLS+T LDTP FRW+ L+K+ WQDP G +R WECAFR TR+SECDGVAV+VF+ YPVS KEDE++L+SQYRPPVA+EVIESPAGL+D GEDAK  AERELLEETGFSGKVT VSPIV CDPGMTDA MRFVTIEV+GDSE+N+NP AR E+GEFITLRRLP  SMQ GL+     GFQVDARLYAMA+GYTL  R  ++
Sbjct:    5 GRSSVLSTTNLDTPDFRWVSLRKILWQDPKGNNRVWECAFRNTRKSECDGVAVIVFVSYPVSKKEDEILLISQYRPPVASEVIESPAGLVDAGEDAKEAAERELLEETGFSGKVTSVSPIVPCDPGMTDANMRFVTIEVNGDSEENQNPKARPEDGEFITLRRLPATSMQEGLDEFANAGFQVDARLYAMAVGYTLGRRAAAA 207          
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: A0A4D9CR14_9STRA (Nudix hydrolase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR14_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.640e-46
Identity = 91/195 (46.67%), Postives = 123/195 (63.08%), Query Frame = 1
Query:  262 VLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTRRSECDG------VAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALG 828
            V+ +     PGFRW+ LK+L + D  G  R WE A R  RR+  +G      V +V  +    +   D +VLVSQ+RPPV  EV+E PAGL+D+GED   +A REL EETGF G VT VSPIV  DPG+++A MR+V + +DGD   N+ PVA  +E E IT+ R+PV  +   +E   + GF++DARLY +ALG
Sbjct:    4 VIKTEDHSAPGFRWVSLKRLQYCDARGRKRTWEMAERIQRRTASEGPPPANGVGIVAIISTSFAKDNDHIVLVSQFRPPVGKEVLELPAGLVDDGEDETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLNEVEGFREQGFEIDARLYGLALG 198          
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: F0XWS1_AURAN (Nudix hydrolase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWS1_AURAN)

HSP 1 Score: 173 bits (439), Expect = 2.030e-46
Identity = 97/184 (52.72%), Postives = 119/184 (64.67%), Query Frame = 1
Query:  292 GFRWLGLKKLTWQDPNGISREWECAFRPTRRSECDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKG-GFQVDARLYAMALGYTLA 840
            GFRWL LKKL + D  G  R WE A R TRR   DGV +V  +R      +  VVLV+Q+RPP+   V+E PAGL+D GE A   A REL EETGF G VT VSP+V  DPGM+ A M+ V ++VDGD+ +N  PVA  EEGEFIT+  +P+A +   L A +K  G+ VDARLYA A G  LA
Sbjct:   12 GFRWLRLKKLAYVDQTGRRRFWEMAERTTRRGAVDGVGIVAVVRRRACAPQ--VVLVTQFRPPLDGHVLELPAGLVDGGEGAGGAALRELKEETGFVGTVTSVSPVVASDPGMSAANMQLVVVDVDGDAPENLKPVAEPEEGEFITVLLVPLAGLAARLRAEMKARGYHVDARLYAYAAGLELA 193          
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: A0A1X7QX37_9SACH (Similar to Saccharomyces cerevisiae YBR111C YSA1 Nudix hydrolase family member with ADP-ribose pyrophosphatase activity n=1 Tax=Kazachstania saulgeensis TaxID=1789683 RepID=A0A1X7QX37_9SACH)

HSP 1 Score: 174 bits (442), Expect = 2.770e-46
Identity = 92/214 (42.99%), Postives = 133/214 (62.15%), Query Frame = 1
Query:  202 IGRYSMSFSSVLVAPQGRSSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTRRSE-CDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTLA 840
            I +  +S ++V  AP+    + S+   D    +W+GL+KLT+ DPNG+ REW+CA R TR S   DG+ ++  L+Y   G  D+V+L  Q+RPPV    IE PAGL+D  E  +  A REL EETG+ GK+T  SPI+  DPG T+  M  +T+EVD    +N+NP  +LE+ EFI   ++P A++   LE L K G+++DARL  +A G  +A
Sbjct:   18 ISKQFISMTTVKGAPERAKLISSAPVTDPNSCKWIGLEKLTYTDPNGVQREWDCAVRKTRNSGGVDGIGMLTILKYK-DGTPDQVLLQKQFRPPVDGVCIEVPAGLVDANESLETAALRELREETGYIGKITSKSPIIFNDPGFTNTNMSLMTVEVDMSLPENQNPQTQLEDNEFIECFKVPFANLNNELEKLYKQGYRLDARLQNVAHGIEIA 230          
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: W0TG34_KLUMD (ADP-ribose pyrophosphatase n=1 Tax=Kluyveromyces marxianus (strain DMKU3-1042 / BCC 29191 / NBRC 104275) TaxID=1003335 RepID=W0TG34_KLUMD)

HSP 1 Score: 166 bits (420), Expect = 2.300e-43
Identity = 90/200 (45.00%), Postives = 123/200 (61.50%), Query Frame = 1
Query:  244 PQGRSSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTR-RSECDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTLA 840
            P+    + S    +T   +W+GL KLT+QDPNG +REW+ A R TR     DGV ++  LR+    K DE++L  Q+RPPV    IE PAGL+D GED +  A REL EETG+ GK+   SP++  DPG T+  +  VT+ VD    +N+NPV  LEE EFI    +P+ASM   L  L K G+++DAR+  +ALG  +A
Sbjct:   22 PELAKLLSSRPVTNTEECKWIGLTKLTYQDPNGKTREWDSAIRMTRSEGGVDGVGILAILRF--KDKPDEILLQKQFRPPVEGVCIEMPAGLIDGGEDIETAAMRELREETGYVGKILHSSPVIFNDPGFTNTNLSLVTVLVDMSLPENQNPVTELEENEFIECFSVPLASMADELAKLDKEGYKLDARVQNVALGIKIA 219          
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: A0A507BWH5_9FUNG (Nudix hydrolase domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BWH5_9FUNG)

HSP 1 Score: 165 bits (417), Expect = 3.390e-43
Identity = 86/194 (44.33%), Postives = 122/194 (62.89%), Query Frame = 1
Query:  256 SSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTRRSECDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTL 837
            + ++S   +     +W+ LKK+T+ DP G  R WE A R +R+ + D V ++  L+ P   K  E VLV+Q+RPPV A+ +E PAGL+D+GE A+  A REL EETGF GK    S I+  DPGM++A M+FVT+EVD    +N +P A  +EGEFI +  +P+  + G L+  +  GF+VDARLY  A G  L
Sbjct:    4 AKIISKEPMKDEDAKWVKLKKITYSDPAGKIRLWESAERTSRKGDIDAVGILALLKMP--NKPTETVLVTQFRPPVGAQCVEMPAGLVDKGETAEQAAVRELREETGFIGKAIRSSEIMDSDPGMSNANMKFVTVEVDRTLPENHSPKAEPDEGEFIDIHIVPLVGLLGTLKGFISKGFKVDARLYHFAEGLDL 195          
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: Q6CVU6_KLULA (KLLA0B09306p n=2 Tax=Kluyveromyces lactis TaxID=28985 RepID=Q6CVU6_KLULA)

HSP 1 Score: 164 bits (415), Expect = 1.100e-42
Identity = 90/200 (45.00%), Postives = 122/200 (61.00%), Query Frame = 1
Query:  244 PQGRSSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTR-RSECDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTLA 840
            P+    + S    DT   +W+GL+KLT+QDPNG  REW+ A R TR     DGV ++  LRY  S K DE++L  Q+RPPV    IE PAGL+D GE  +  A REL EETG+ GK+   +PI+  DPG T+  +  VT  VD    +N+NPV+ LEE EFI    +P+ASM   +  L + G+++DAR+  +A G  LA
Sbjct:   21 PELAKLLSSKPVSDTSDCKWIGLRKLTYQDPNGKVREWDSAVRLTRSEGGVDGVGILAILRY--SDKPDEILLQKQFRPPVEGVCIEMPAGLIDGGESIETAALRELKEETGYVGKILHATPIIFNDPGFTNTNLSLVTAIVDMSLPENQNPVSELEENEFIECFTVPLASMADEMAKLAEQGYKLDARVQNVAQGIKLA 218          
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: A0A4Q9QG04_9APHY (NUDIX hydrolase domain-like protein n=3 Tax=Dichomitus squalens TaxID=114155 RepID=A0A4Q9QG04_9APHY)

HSP 1 Score: 162 bits (410), Expect = 3.360e-42
Identity = 94/205 (45.85%), Postives = 125/205 (60.98%), Query Frame = 1
Query:  256 SSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTRRSE-CDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGF-SGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTLAGRKCSSLP 864
            S VLS   L T   +W+ LKK TW+DP+G  R WE A RPTR S   D VA++  LR   +      +++ Q+RPPV   V+E PAGL+DEGE A+  A REL EETGF +  V   SP++VCDPGMT+A M+ VT++V    EK + P  +LE GE+IT R + ++ +    + L   GF VDARL  MA G+ LA R   + P
Sbjct:    4 SKVLSVEDLQTSEAKWVKLKKCTWRDPDGKERPWEFATRPTRGSGGVDAVAILAILRSESNAFPPSTIIIEQFRPPVERYVVELPAGLIDEGESAEGAAIRELEEETGFKASSVIQTSPLLVCDPGMTNANMKLVTVDVPFP-EKLEMPAQKLEPGEYITARIVELSKLAAEFKGLSSIGFVVDARLSHMASGFELAERLRQAKP 207          
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: A0A0D7BB00_9AGAR (Nudix hydrolase domain-containing protein n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7BB00_9AGAR)

HSP 1 Score: 160 bits (406), Expect = 1.280e-41
Identity = 93/201 (46.27%), Postives = 125/201 (62.19%), Query Frame = 1
Query:  250 GRSSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECAFRPTRRSE-CDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSG-KVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTLAGR 846
            G+  VLSS  L T   +W+ LKK+T++D  G  R WECA R TR+S   D VA++  ++   +      V++ QYRPP+ A V+E PAGL+DEGE A+  A REL+EETGF   ++   SP++V DPGMT+A M+ V + V    E  + P A+LE GEFIT R + +A +   L+A  K GF VDARL   A GY LA R
Sbjct:    3 GQPKVLSSVDLPTDQAKWISLKKITYRDAEGKERPWECAERRTRKSTGVDAVAMLAMIKSKTNAFPLSTVIIEQYRPPIDAFVVELPAGLIDEGESAEDAALRELVEETGFKAERIIESSPVIVSDPGMTNANMKLVLLSVTLPGEM-ETPEAQLEAGEFITKRVVALADLNEELKAYDKRGFVVDARLSHFAQGYDLARR 202          
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Match: A0A0A8L2H8_9SACH (WGS project CCBQ000000000 data, contig 00053 n=1 Tax=Kluyveromyces dobzhanskii CBS 2104 TaxID=1427455 RepID=A0A0A8L2H8_9SACH)

HSP 1 Score: 159 bits (401), Expect = 5.720e-41
Identity = 87/182 (47.80%), Postives = 116/182 (63.74%), Query Frame = 1
Query:  298 RWLGLKKLTWQDPNGISREWECAFRPTR-RSECDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGLMDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEVDGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYAMALGYTLA 840
            +W+GLKKLT+QDPNG  REWE A R TR     DGV ++  LRY  + K DE++L  Q+RPPV    IE PAGL+D GE  +  A REL EETG+ G +   SPI+  DPG T+  +  VT+ VD    +N+NPV+ LEE EFI    +P+ASM   +  L K G+++DAR+  +A G  +A
Sbjct:   22 KWIGLKKLTYQDPNGRVREWESAERLTRSEGGVDGVGILAILRY--ANKPDEILLQKQFRPPVEGVCIEMPAGLIDGGESIEIAALRELKEETGYVGDIINSSPIIFNDPGFTNTNLSLVTVIVDMSLPENQNPVSELEENEFIECFTVPLASMAEEMAKLDKQGYKLDARVQNVAQGIKIA 201          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKH9_ECTSI1.410e-9774.88Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A4D9CR14_9STRA1.640e-4646.67Nudix hydrolase domain-containing protein n=2 Tax=... [more]
F0XWS1_AURAN2.030e-4652.72Nudix hydrolase domain-containing protein (Fragmen... [more]
A0A1X7QX37_9SACH2.770e-4642.99Similar to Saccharomyces cerevisiae YBR111C YSA1 N... [more]
W0TG34_KLUMD2.300e-4345.00ADP-ribose pyrophosphatase n=1 Tax=Kluyveromyces m... [more]
A0A507BWH5_9FUNG3.390e-4344.33Nudix hydrolase domain-containing protein n=1 Tax=... [more]
Q6CVU6_KLULA1.100e-4245.00KLLA0B09306p n=2 Tax=Kluyveromyces lactis TaxID=28... [more]
A0A4Q9QG04_9APHY3.360e-4245.85NUDIX hydrolase domain-like protein n=3 Tax=Dichom... [more]
A0A0D7BB00_9AGAR1.280e-4146.27Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A0A8L2H8_9SACH5.720e-4147.80WGS project CCBQ000000000 data, contig 00053 n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig105contigF-serratus_M_contig105:490749..498678 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score311.2
Seed ortholog evalue4.5e-82
Seed eggNOG ortholog2880.D8LKH9
Preferred namendx-2
KEGG rclassRC00002,RC00004,RC00010,RC00039,RC02725,RC02798
KEGG koko:K00652,ko:K01515,ko:K01915,ko:K13987,ko:K14400
KEGG ReactionR00253,R01054,R03210,R10124,R11553
KEGG Pathwayko00220,ko00230,ko00250,ko00630,ko00780,ko00910,ko01100,ko01120,ko01230,ko02020,ko03015,ko04217,ko04724,ko04727,map00220,map00230,map00250,map00630,map00780,map00910,map01100,map01120,map01230,map02020,map03015,map04217,map04724,map04727
KEGG ModuleM00123,M00573,M00577
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009132,GO:0009134,GO:0009185,GO:0009191,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047631,GO:0055086,GO:0071704,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576
EggNOG free text desc.ADP-glucose pyrophosphohydrolase activity
EggNOG OGsCOG0494@1,KOG3041@2759
Ec32 ortholog descriptionNUDIX hydrolase domain
Ec32 orthologEc-16_003020.1
EC2.3.1.47,2.7.7.96,3.6.1.13,3.6.1.58,6.3.1.2
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03019,ko03021,ko04147
Exons7
Model size2271
Cds size789
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928876.6054385-UTR-F-serratus_M_contig105:490748..4913411622928876.6054385-UTR-F-serratus_M_contig105:490748..491341Fucus serratus maleUTRF-serratus_M_contig105 490749..491341 -
1690962610.9369984-UTR-F-serratus_M_contig105:490748..4913411690962610.9369984-UTR-F-serratus_M_contig105:490748..491341Fucus serratus maleUTRF-serratus_M_contig105 490749..491341 -
1622928876.6266513-UTR-F-serratus_M_contig105:491363..4920361622928876.6266513-UTR-F-serratus_M_contig105:491363..492036Fucus serratus maleUTRF-serratus_M_contig105 491364..492036 -
1690962610.94776-UTR-F-serratus_M_contig105:491363..4920361690962610.94776-UTR-F-serratus_M_contig105:491363..492036Fucus serratus maleUTRF-serratus_M_contig105 491364..492036 -
1622928876.7546983-UTR-F-serratus_M_contig105:498462..4986781622928876.7546983-UTR-F-serratus_M_contig105:498462..498678Fucus serratus maleUTRF-serratus_M_contig105 498463..498678 -
1690962611.022356-UTR-F-serratus_M_contig105:498462..4986781690962611.022356-UTR-F-serratus_M_contig105:498462..498678Fucus serratus maleUTRF-serratus_M_contig105 498463..498678 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928876.643585-CDS-F-serratus_M_contig105:492036..4922031622928876.643585-CDS-F-serratus_M_contig105:492036..492203Fucus serratus maleCDSF-serratus_M_contig105 492037..492203 -
1690962610.9557023-CDS-F-serratus_M_contig105:492036..4922031690962610.9557023-CDS-F-serratus_M_contig105:492036..492203Fucus serratus maleCDSF-serratus_M_contig105 492037..492203 -
1622928876.663736-CDS-F-serratus_M_contig105:496342..4964641622928876.663736-CDS-F-serratus_M_contig105:496342..496464Fucus serratus maleCDSF-serratus_M_contig105 496343..496464 -
1690962610.965004-CDS-F-serratus_M_contig105:496342..4964641690962610.965004-CDS-F-serratus_M_contig105:496342..496464Fucus serratus maleCDSF-serratus_M_contig105 496343..496464 -
1622928876.6830606-CDS-F-serratus_M_contig105:496655..4967241622928876.6830606-CDS-F-serratus_M_contig105:496655..496724Fucus serratus maleCDSF-serratus_M_contig105 496656..496724 -
1690962610.9743323-CDS-F-serratus_M_contig105:496655..4967241690962610.9743323-CDS-F-serratus_M_contig105:496655..496724Fucus serratus maleCDSF-serratus_M_contig105 496656..496724 -
1622928876.7037385-CDS-F-serratus_M_contig105:497053..4972081622928876.7037385-CDS-F-serratus_M_contig105:497053..497208Fucus serratus maleCDSF-serratus_M_contig105 497054..497208 -
1690962610.9837995-CDS-F-serratus_M_contig105:497053..4972081690962610.9837995-CDS-F-serratus_M_contig105:497053..497208Fucus serratus maleCDSF-serratus_M_contig105 497054..497208 -
1622928876.7219973-CDS-F-serratus_M_contig105:497558..4977201622928876.7219973-CDS-F-serratus_M_contig105:497558..497720Fucus serratus maleCDSF-serratus_M_contig105 497559..497720 -
1690962610.9952435-CDS-F-serratus_M_contig105:497558..4977201690962610.9952435-CDS-F-serratus_M_contig105:497558..497720Fucus serratus maleCDSF-serratus_M_contig105 497559..497720 -
1622928876.7359874-CDS-F-serratus_M_contig105:498348..4984621622928876.7359874-CDS-F-serratus_M_contig105:498348..498462Fucus serratus maleCDSF-serratus_M_contig105 498349..498462 -
1690962611.012327-CDS-F-serratus_M_contig105:498348..4984621690962611.012327-CDS-F-serratus_M_contig105:498348..498462Fucus serratus maleCDSF-serratus_M_contig105 498349..498462 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig105.516.1prot_F-serratus_M_contig105.516.1Fucus serratus malepolypeptideF-serratus_M_contig105 492037..498462 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig105.516.1

>prot_F-serratus_M_contig105.516.1 ID=prot_F-serratus_M_contig105.516.1|Name=mRNA_F-serratus_M_contig105.516.1|organism=Fucus serratus male|type=polypeptide|length=263bp
MSFSSVLVAPQGRSSVLSSTTLDTPGFRWLGLKKLTWQDPNGISREWECA
FRPTRRSECDGVAVVVFLRYPVSGKEDEVVLVSQYRPPVAAEVIESPAGL
MDEGEDAKATAERELLEETGFSGKVTFVSPIVVCDPGMTDAIMRFVTIEV
DGDSEKNKNPVARLEEGEFITLRRLPVASMQGGLEALVKGGFQVDARLYA
MALGYTLAGRKCSSLPTLVTFNRRSIRCNLEPQRLWNVCGARVGAYCTPM
AHAGILAQIRAH*
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mRNA from alignment at F-serratus_M_contig105:490749..498678-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig105.516.1 ID=mRNA_F-serratus_M_contig105.516.1|Name=mRNA_F-serratus_M_contig105.516.1|organism=Fucus serratus male|type=mRNA|length=7930bp|location=Sequence derived from alignment at F-serratus_M_contig105:490749..498678- (Fucus serratus male)
AGCTCCCGCAGAGGAGTACATCATTTGTTCCTCAAGCTGGTGTGCAACCG GACGAAAGAGACGATACACGCTAAGACATCTGCTACATTAGCCACAGCAC AGTCTCGCTGCCGCTTCGCCGTTCAAAAGATCGCACCAGGAAGATTTCGT GCCTTCTGACCCAGGCGTGGGGATTGTTAAATTGCCACTCTCTCGAAGGC GATAGGGAGATACAGCATGTCATTTTCCTCTGTTCTAGTCGCACCCCAGG GTCGATCTTCGGTCCTATCGTCGACTACCTTGGACACCCCGGGTTTCCGT TGGTTGGGTCTCAAGAAGCTGACGTGGCAGGTGGGCTTACTTCCTACCTC GCTCCGACAAAGCCACGCATCGATAGTCCCGCGCTGAAAGATTCTTGGAA CGATACGGCAATAAAAAAAACATGTACTTACTTGGTGCAGTAGTCTAGAC AGTTAACATGTAAAAGGGAAGATCTCCCAATCCGGAGAGGTCAACACGTA TGCAGGCGGCACTTCGTTTGCTCGAGGCTGACAACGCGCGCGGTCGGGAG GATGCATGCACATGGTTCACAGTAGCTACCTCCTCAATTTGTCATTGGCA AAATGATGGATGGAATATTTATACCCCTACTTGGCGTTTGAGGTAGCGAT AAAAAAAAACAAAGGTGGGTTCGTAAGCTCGTGAATGGCGGGCATGACAC ACAATAAGCTTTCGGGCGTGAACATCTCTCCAGACTCGGAAGGAAAGTAA TTGAGCCCGCCCGCATGGCTAGAGTATAGTCTAACCTGATATATTTTTCA CTGGAAAGAGGCTCAAGAAATCGCTCCTTTCACGGGTGTACACGTAGAAC CGGCGCCAGGAGGAATTCCCCCCCCCCCAGTTACATGCCTACCACATTAA TGCCGTCTTCTGCCAACGCTCTCCTCCCCCGGACACACTACTTGAACATG TTTCGCAGGACCCGAACGGTATCAGTAGGGAGTGGGAGTGCGCCTTCCGT CCAACGAGGCGCTCGGAATGCGATGGCGTTGCGGTGGTCGTCTTTTTGAG ATACCCCGTGTCGGGCAAGGAGGACGAGGTGGTGTTGGTGTCGCAGTACA GGCCTCCCGTCGCAGCCGAGGTGATTCCCTCTACGATATCTGTATGGCTG AGAAGCCTCGTTCCTCGTAAAGGGGGAAATCGATCATACCTTTGACTTGC AAATGGGGCTGTTTTTTTAACTTTGATTTAGTAATGCAGCCCGTACCGGT CTTGTACACGAGACTCGGGTGACATTCCCACATGAAATAATTTATTGCAT TGCAGACTAAACGTTCAGAGGGAAATAGCTGTGGGGCCATACGCTCGAGC GGCCTGTGACCTCCTCCAAGTCAGCATATGTATCGTGCGCCAAATGCGAC CAGTTTTCTGGGGAAGAATGATCCCATTCCACCAACAACATCGTGGTATT ATCTGTCCTGTCCGGGCAAGGTAATCGAATCCCCTGCTGGACTTATGGAC GAGGGGGAAGATGCCAAGGCGACGGCGGAGCGGGAGTTGCTCGAAGAGAC TGGCTTCTCGGGCAAGGTCACCTTTGTATCGCCGATCGTGGTGTGTGATC CGGGTATGACCGACGCAATCATGCGGTGAGTCGACCTGGCGAATGGAAGG GAATCATGATTAGAGGTGTTCCTGTGAATCGAGTGTGTCCGTCGATTTCT CAAAGCTTCTGTAATGCTCTGGGGGGCTTACACGACGTTCAACAGCTTCA ACCGAGAAATGGTTTGATATCCGTTAAACGGAAGAACGAAAGAGAGACGA CCGTGGAAGTCTCACAAGGTCGCGCTGAGAAAATTTGGAGAGAGGCACGG CATTGAAACCTAACGACAGATAGGAGGATCCCCTTGCGTAGGACTAATGA TTATTTTTGCCTCCCGGCGCTCTGTGCCGTGTCGACACCATTATTACCAC GCAGGTTCGTGACAATCGAGGTCGATGGGGATTCGGAGAAGAACAAGAAT CCGGTTGCACGCCTAGAAGAAGGGTACGTGAACGTTTGCCTTGCGTTCCC GAGTGATCGTGCTGCGCGTGTAAAAACGTATCGTCCTTGCCCGCGCGCTG GTTACCTCCACGGAAAAGAGTTCGAGGAAGTTTCCTCGTCAAAAGCTGGT TACGACCGCCAGAAAAACAGGTCTCTGCTACTGCTACTGCTGTGCCCTTG CTCTATCTATCCAGGGAGTTCATAACCCTGCGGAGGTTGCCGGTGGCCTC GATGCAAGGAGGCTTGGAGGCTTTGGTCAAAGGCGGTTTCCAAGTGGATG CGCGCCTCTACGCGATGGCGCTGGGTTACACGCTCGGTAAGAGCGCGATT CCAACCACCGGCGGAGGCTGGTGTCGCAGGTGGTCTCGCAATCCAATGAT GAAGTATGTGTTGATTGCTTCTACTGTCGTAACAGCGACGGCTTTGGTGG TGGGGACGCTCGGAGGAATACGGCGGAAGGGGATGTGAATATAACGCGCA AGTACGAAACCTGTGTATACAAAGAAAATATGCGCTACTGAACGCCGCGA GCTATGGAACGTAATGGATGATTGTGATCGAGGAAGAAGACCAAAGGTCA TAAAAAAAACTACGCTCAAGGGGTAGTAACACAAGAAGTTCGAACGCTAT TCATAGAATCTCCGGCGACAACATTTCACCGGAGATTTATTGGTCTGCAG TAATATTTTTGGATATCGATACCACCCGTGGAAGTACTGTACGCTGTAAG TGAAGATCGAGTCAGTGACGTACCAGGCACGCCACTCCCATAATACAGTA GTAGCTGTGGTGCTTTCCGTTGGGCAGCGAGTCGCAAGCACTACTTCACA CAGGTTCATTTCAAAGCTATTTTACGTGTTGCAGAAAGGAGAAAGTTCTA CGCGCACGTGTCGTTTTTCTTTATTTGTTGAAGAGCTTAACGTTGGTCGC ACCTCCTCTGGACATTGGATTTCACGAGGCTAGTATGGTTCAGCTTTCTG CCGTGCAGCACGGCTACCTCTTCTACTCATCGTGTGCTCAGGATAGCTCT TACGCGAAAGGGATCGTTGGAGTTGAAGCTCTCGCACGAATGATGAGTGG TTTTCTGAACCCTCTCTATTATTGTAGTCGTTTGTATGTTCTCCCGACTC TTTTTCGATGCCGTACACGTGGATTTCAGGCACACCTGGTCCTCCAGCAC GATGTACTACCTTTTGTGGTCCATCTGCATCCTACGAACGCACCGTACAA AAATATGCTGCTTGTAAACATTTCAATTTAAGGCCTTTTCGTCAGACCGC TAGTTAGTTCCCGCTCATTCTATAGAAGAGCGGAGCCCTGTAGTCTATTA CAACTCGTGCCCATGGGGTTACCAGCCATATGTTTAAAGAAAAATCTGAA CGCGCCTAGACCTTCTGTTCAAAGAAGTTAGGGTGGCCAGTTCCTTGGAC AATCTGCATTCTCTCAATCTGCATTCTATCTGCAGACCTTAATCCCAAAG TTCAAGTCGCCTCGTGAGTCTCTCCGAATTGAGGTCGGCTTCTGTCAGAA TTCGCGTCCATTCAACTTCTATTTTCATTGCCGTCTGGATAGTGGATACT ATTATTAATAATATAATACCTGGTGGTCGATAATATTAGTCGTATCGAAA GGCGAGTTGCGATCTGCGCACACACGTCTGTTACGTTGGCAAGATGTGTA CGCACAATAAGTTCATTCAAACACTACTACTATAATATTGAACTGTGCGT AAAACACTGCACTTCCTGTGTGTGCATCGCCGAACGACGAGCTGATTGCG TCGACTTTTTTCCAAGAGTCGCTCTTATTCCTTTTTTATTGTCCCAGTCG TTTCTAGAACGTTCGCGTTTTGCCCTTACAGCCGACGCACAAGAACAACA GCAGTTACTACAACACCAGTTGGTCTCTGAGGGCACCATCACAAACATTT CCGAATGAATCCTGCGAGTGGACTGCTGGAAGTCCCCCGCGAAGGTTCGT TCATGGCAGACATCTTCGAGTTACGTGACGTCATAATTATGCGGATCCCT CGTTATACGCCCGACATTGTATGTCACGTTGGAAGAAAAAAAACAAACTT ATTCTAAGTTCAACGCTGCTTCCAAGAACAAATGATCGCCACGTGTGTGC GTGTGAGAAAAATCTGAACGCATCTAGACCTTTTGGCCACCCCACAGTCA GGGGGGGGAAAGGTCAAAACGCTTGCTGCTTAGGTGGGATCATAGGCTGC AACGCCAAAACCTCTTCATAGCACTTAATCGGGTTCCCCGATGATGATGG TAGTAACATTGGGTCAACGTTATCACGGAGAGAAAATTAAATTGCAAATG AGGGTGAAACCCGGCCCTGTCATTGTCTTATTCAATACTGCTGTAGTCAT TCTATACTCCTCGCATTGACTCTCCCATCAAAAAAGGTGTGTGTGTGTGT ATGTGTGTGGTGTGTGTATTTATCAAATTGCACATATGACCGCGCAGTCC GGACCACCTGTCGTCCTAGTCATTTTATGTAGTACCTGGTATTATGTGTT AGTGAGAGCGATCAAGTCCAGCAGATTGGTGACGTGTACCGGGTACGGTT CCCGACAACAATAAAATAATACAAATTATTACAATATTATTACTCCTTGT GATCAGCTGAACAGAGAAAACGGATTTCCCCTGCCGTCCCCGTCCGCGCC GCCTACGAATTCGTCCCGCGAGAGAGGTTGTTCCGCTGCTGCCGCCCCGT CCCGCGTCAGCCCCCTCATTCTCCACACACCACCCAGCGTGAATCTGGTG GTAAGATCTAACTAAGAAGGGGCGCAAACGACAACGCAACGCGGCTATGG CGTTGTTTCGTTGCAAAAAAAAAGTACTGGACCAGGTGGTGGTGTAAAAT ATTAGAAGAAGACTAACACCTAGCAAACAGTTTGAAATGGATGCCATGTG GTGGCGTGCACTGAGGGGATGGAAACATAGAGGCGCAGATTGATTGATTG CTGGTACATGGTGAAACCTGAAACGATAGCACCCGTTGTTACTGGAACTA CTACTTTTTTTAGGAATACTTGCCCTGTGCCGGCGGACTCTCGGCAGTGC ACACCGTCGGGAGACAAAACTACATACTCTAATATTTAGTAGAAAACACT CTCTTCTGCACAGTCAAGGGTGTCGTCAGGTCGGAAAAGCGTACGTACGT ACTTCAGTTCCAACACGAAACTAGTTGTGCAAGCAGGACTCTCTCTCTTA CGTCGAGGATTGAGAGGAGGGAAGAGCCCCTGGACGGGCCGCTGCGAAGA AGGTGTCGCATGCGGTGGAACAGCCTACTGCGCTGCACAATGATTATAAT TATATATATATATATATATATATATACGGAAGCATTCTCTGTACAGCTGT GTAATCCTCCAGCGCCCTGCGCTCTCCACTCCGCTTCCTGGTGCGGTGTG TGTAGAGTCACAACTTTTAGATGTAGATAGACAGCTGTGGTGTGATTTAT GGCATACAGTATACCAGGTACAGTATATATCCCATATATTATGCTTGACG AGCATGCCATACACCACTATTACTTGGTGATACTATGTAATAATCGAATC ATGCGCGGTGTACGTCGTAGTCTGCTACCAGGTATTTAAGATTACTGTAA TAATATTATCAGATGATCAAAACCTCTCTCTCTCTCTGTGTAAATGAAAC CAGAACAGTTGCCCCCCGCCCAGTCCGACAGGATAAGCATCGGTGATTTC CTCGCAGACTACATCACGGATCGATCGAGGGAAAAGAAATTGACCCCACC GAACAATTCCTGTCTCTTCAACATTATTCGGTGCACCTTCTCCTCATCAT TCTGCCGTACCTACTGTTTGTGGTCAACAGTAAGTATCAGTAATTATTGT ATTTCATTTTTTTCTCGGCGTTTTTTATGCGGACATATTATCCTGTTTTG TACGGAGCCGCACGACTCCAGCGACCACTCACACCCTTCTCCGGCAGGTA CTCATACTATAATACACTCATACTATAATACACTCATACTATAATACACT CATACTATAATACACTCATACTATAATACACTCATACTATAATACACTCA TACTATAATACACTCATACTATAATACACTCATACTATAATACACTCATA CTATAATACACTTATACTATAATGCACTCATACTATAATACACTCATACT ATAATACACTCATACTATAATACACTCATACTATAATACTTGCTTGTCTC GGAGAGTCGCCGGAGACGATGGCGGCAGTTAGTACACTGTATTGTAATCC GCCATTTTATTTCCACGTTGCCATGAGAGCTCGCAGTCGGGGGTGTGGTA TGATGACGACGCAATCCTCGGTGTGGTTCGAGGAGGTGGTGTAGGAACTC TGCGCCAGCCAGTAAGGATGCCTGCAAAATAATTTCTCTGATATATATAC CCCTCGTTGCCCTTCATCGTTTCAGCAGGACGCAAATGTTCCTCCTTGCC GACCTTGGTCACCTTCAACAGGAGGAGCATTCGGTGTAACCTGGAACCAC AACGGCTCTGGAATGTTTGCGGCGCTCGCGTGGGGGCATACTGTACGCCG ATGGCCCATGCCGGTATTCTCGCGCAGATTAGAGCTCACTAGATGGACCG AGATTATCCTTGCTAAATACTCAGGCGCATTCTGTCTACAACAGAATACG TGCCGATTCCGTGAGCGCCGGTAACGCCGGATAGATGTGACCGTCGAGAG ACCATGATAGCAACACCTGGCTACCTTGGTCTTCGAAATGACTCAGACAG GTGGCTACCAAAACCTGACCGCTGAGGTTTTACCGACCGGTTGTTTCGGG ATGTATGACCACCAAGGGGGGCGCAGCTGCATCATCTATACGAGACGAGG AGCGGAGTGAATCAGACGAAATAACAGGAGAGAGGAAGACATCTCGTCAT GATCGCACCGGCAATGACTACCGGAGAATTTAAAGCTTTGATGGTGGGCC ACCTCAAGGATATCTTACGCGGGGCCGGCTCCGCCTGGAGGGAGGCCTGA GAACCCGCGAGTTGTCGCGAAAATCAAAATGTCTTTGAGTGTTATAACTC TACACTACTCGTGTCAAGCTCTATACTTTATTTTGGTCGTCGGGTATGTA CTTCCTTGTTTAGACGAGTGGTCGTGAAAAGGAAAATGTCTTCGAATGTT ATAACTACTCTATACTACTTCATGTCGAGCTCTGTACTTTAGTCGTATCG CGTGTACTTCCTTGTTTAGACGCGTGGTGGCAGATATCGTTTGTGGGGGT CGTAGCATGCTGCGCGCATAACCTGATCATGATACAGTAATCAAAACGCT TTAGAGAGTGCATTTACCTTGTATATTCTACTGTTCATATGTTCCTTGCG AAGGTTTTATCTGTTGTGGGTCGGGCATGTTTGTTGCGCCCGACCCCTCT GTTTTTGTTTACACTTGTATAATTTTATCGTGTGTTTTGCTTTATTTCAC TATAACTATTGCCTGTCTTTCTTGTCCGCCTCCTTCGAGATTGTGTCTTG TTATTCAGCGAACGAAGTTTTAGGGAAATCGAAATCGATGATTGACTGAT CGACGAAGCTGGGAAAAACAAAGAAGACACTGTAAGGGTCCAGGACGGTC AAAAATTAGGGAGAGCACTCTGGGAAAGGTTTGAAGGGCTACAGAGTATT TACACCCAAGCCAAGCAGGGGTTTGTCACGTTGAGTAAGAATGTGATACT TCTGGTGGCGTTGGGGGCTTGGAATCAACCACGAACTACAAACGAGCCTT GTGCCAAACATTAGAAGAATTGCTGCGAGGGGGCATCGAGGCTTCAAAAG GGCCTAGAGGGTGGCTATTGGATAAAGACACTGGAGTATATCGTGATAAA GTAAACAAAGGAGAAGACGCCGCATTAGGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig105:490749..498678-

>mRNA_F-serratus_M_contig105.516.1 ID=mRNA_F-serratus_M_contig105.516.1|Name=mRNA_F-serratus_M_contig105.516.1|organism=Fucus serratus male|type=CDS|length=1578bp|location=Sequence derived from alignment at F-serratus_M_contig105:490749..498678- (Fucus serratus male)
ATGTCATTTTCCTCTGTTCTAGTCGCACCCCAGGGTCGATCTTCGGTCCT
ATCGTCGACTACCTTGGACACCCCGGGTTTCCGTTGGTTGGGTCTCAAGA
AGCTGACGTGGCAGATGTCATTTTCCTCTGTTCTAGTCGCACCCCAGGGT
CGATCTTCGGTCCTATCGTCGACTACCTTGGACACCCCGGGTTTCCGTTG
GTTGGGTCTCAAGAAGCTGACGTGGCAGGACCCGAACGGTATCAGTAGGG
AGTGGGAGTGCGCCTTCCGTCCAACGAGGCGCTCGGAATGCGATGGCGTT
GCGGTGGTCGTCTTTTTGAGATACCCCGTGTCGGGCAAGGAGGACGAGGT
GGTGTTGGTGTCGCAGTACAGGCCTCCCGTCGCAGCCGAGGACCCGAACG
GTATCAGTAGGGAGTGGGAGTGCGCCTTCCGTCCAACGAGGCGCTCGGAA
TGCGATGGCGTTGCGGTGGTCGTCTTTTTGAGATACCCCGTGTCGGGCAA
GGAGGACGAGGTGGTGTTGGTGTCGCAGTACAGGCCTCCCGTCGCAGCCG
AGGTAATCGAATCCCCTGCTGGACTTATGGACGAGGGGGAAGATGCCAAG
GCGACGGCGGAGCGGGAGTTGCTCGAAGAGACTGGCTTCTCGGGCAAGGT
CACCTTTGTATCGCCGATCGTGGTGTGTGATCCGGGTATGACCGACGCAA
TCATGCGGTAATCGAATCCCCTGCTGGACTTATGGACGAGGGGGAAGATG
CCAAGGCGACGGCGGAGCGGGAGTTGCTCGAAGAGACTGGCTTCTCGGGC
AAGGTCACCTTTGTATCGCCGATCGTGGTGTGTGATCCGGGTATGACCGA
CGCAATCATGCGGTTCGTGACAATCGAGGTCGATGGGGATTCGGAGAAGA
ACAAGAATCCGGTTGCACGCCTAGAAGAAGGGTTCGTGACAATCGAGGTC
GATGGGGATTCGGAGAAGAACAAGAATCCGGTTGCACGCCTAGAAGAAGG
GGAGTTCATAACCCTGCGGAGGTTGCCGGTGGCCTCGATGCAAGGAGGCT
TGGAGGCTTTGGTCAAAGGCGGTTTCCAAGTGGATGCGCGCCTCTACGCG
ATGGCGCTGGGTTACACGCTCGGGAGTTCATAACCCTGCGGAGGTTGCCG
GTGGCCTCGATGCAAGGAGGCTTGGAGGCTTTGGTCAAAGGCGGTTTCCA
AGTGGATGCGCGCCTCTACGCGATGGCGCTGGGTTACACGCTCGCAGGAC
GCAAATGTTCCTCCTTGCCGACCTTGGTCACCTTCAACAGGAGGAGCATT
CGGTGTAACCTGGAACCACAACGGCTCTGGAATGTTTGCGGCGCTCGCGT
GGGGGCATACTGTACGCCGATGGCCCATGCCGGTATTCTCGCGCAGATTA
GAGCTCACTAGCAGGACGCAAATGTTCCTCCTTGCCGACCTTGGTCACCT
TCAACAGGAGGAGCATTCGGTGTAACCTGGAACCACAACGGCTCTGGAAT
GTTTGCGGCGCTCGCGTGGGGGCATACTGTACGCCGATGGCCCATGCCGG
TATTCTCGCGCAGATTAGAGCTCACTAG
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