|
Homology
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: A0A5C6AGS2_9BACT (Uracil DNA glycosylase superfamily protein n=1 Tax=Botrimarina colliarenosi TaxID=2528001 RepID=A0A5C6AGS2_9BACT) HSP 1 Score: 221 bits (563), Expect = 5.240e-64 Identity = 116/239 (48.54%), Postives = 151/239 (63.18%), Query Frame = 2
Query: 419 NLIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAA 1132
+ I A++RL + + + +PV Y+ L+YAW +EAY R+ R L +GMNPGPWGM QTGVPFGEV RDW+G+ V RP +EHPKRP+EGF+C+RSEVSG+RLWG F RFGTADA+ + FV NYCPL FM+ +G N TPD+LP ERE ++AAC+ L +++ RP +GVGK+ KCL + G V V V HPSPASP+ + W AA
Sbjct: 6 DAIRAAKRLSKAVDALRFD----EPVTHVYNPLKYAWAAHEAYLRRMNPDGV--RVLFLGMNPGPWGMAQTGVPFGEVAAARDWIGIEAAVRRPKDEHPKRPIEGFACQRSEVSGRRLWGLFAERFGTADAFFAEHFVANYCPLVFMTETGKNHTPDKLPLDEREPLDAACDQHLSRLLDIARPEWAVGVGKYA-EKCLLRVAGEG---------VRVTTVLHPSPASPAANRGWAEAA 228
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: A0A3N5QI00_9GAMM (Single-strand selective monofunctional uracil-DNA glycosylase n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A3N5QI00_9GAMM) HSP 1 Score: 221 bits (562), Expect = 6.880e-64 Identity = 114/248 (45.97%), Postives = 152/248 (61.29%), Query Frame = 2
Query: 422 LIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAAGMDELVLGCS 1162
L+ SR L ER+ + PV C Y+ LEYA P+E Y +YGGG L++GMNPGP+GM QTGVPFG+V VRDWLG+ V RP +EHPKRPV GF C R+E+SG RLWG+ + RFGT + ++ FV NYCPL F+++SG N+TPD+LP E+ V +AC++AL ++ LRP++VIGVG F + A+ G + + + HPSPASP + W A LG S
Sbjct: 3 LVDVSRALSERVASLRFA----DPVCCVYNPLEYARAPHELYLSRYGGGPK--EVLLLGMNPGPFGMAQTGVPFGDVTMVRDWLGIVAPVARPRDEHPKRPVLGFDCHRTEISGTRLWGWARDRFGTPQRFFERFFVANYCPLAFVAASGANLTPDKLPAAEQRAVSSACDEALRAVVRLLRPQIVIGVGGFAERRARAAL---------GGENIAIGTILHPSPASPLANRGWAGAIERQLQSLGIS 235
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: Q39ZI0_GEOMG (Uncharacterized protein n=2 Tax=Geobacter TaxID=28231 RepID=Q39ZI0_GEOMG) HSP 1 Score: 221 bits (562), Expect = 7.100e-64 Identity = 115/223 (51.57%), Postives = 148/223 (66.37%), Query Frame = 2
Query: 491 PVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAAGMDELVLG 1156
PVA Y+ L YA +P+ AY ++G L VGMNPGPWGM QTGVPFGEV V +WLG++G V RP+ EHPK+ V+GF+C+RSEVSG+RLWGF + RFGT + + + FV NYCPL F+++ GGNITPD+L GE+E + AAC+ AL + + LRPRVVIGVG F A+C EA+ +VEV + HPSPASP+ + W A LG
Sbjct: 23 PVAHVYNPLLYAREPHVAYLSRFGSPPK--EVLFVGMNPGPWGMAQTGVPFGEVAVVTEWLGINGTVTRPAGEHPKKRVDGFACRRSEVSGRRLWGFIRERFGTPERFFARFFVANYCPLLFLTAEGGNITPDKLRRGEQEPLFAACDLALRRTVVLLRPRVVIGVGAFAEARCHEALEGF---------DVEVGRIIHPSPASPAANRDWAGTALRQLAELG 234
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: A0A4V1SDI5_9BACT (Single-strand selective monofunctional uracil-DNA glycosylase n=2 Tax=Verrucomicrobiaceae TaxID=203557 RepID=A0A4V1SDI5_9BACT) HSP 1 Score: 221 bits (562), Expect = 7.570e-64 Identity = 117/238 (49.16%), Postives = 151/238 (63.45%), Query Frame = 2
Query: 422 LIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAA 1132
LI ++ RL E L+ + PVA Y L+Y W+ + Y ++G G+ + + +GMNPGP+GM QTGVPFGEV VRDW+G+ VG+P EHPKRP+EGF+C+RSEVSG+RLWG F RFGTADA+ FV NYCPL +MSS+G N+TPD+L E VEAAC L ++IA L+P +IGVG F + A + GS R G V HPSPASP+ + W AA
Sbjct: 4 LIASTGRLAEDLRELEFS----PPVAHVYRTLDYTWEAHRKYLERFGKGKK--KVVFLGMNPGPFGMAQTGVPFGEVAAVRDWMGIEASVGKPPHEHPKRPIEGFACQRSEVSGRRLWGLFSERFGTADAFFKDHFVLNYCPLVWMSSTGANLTPDKLSAAEMAPVEAACQKHLQEVIALLKPSWLIGVGGFAEERLRRAAESSGSKARIGRVL-------HPSPASPAANRGWAEAA 228
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: A0A1Q3VS10_9PROT (Single-stranded DNA-binding protein n=1 Tax=Candidatus Accumulibacter sp. 66-26 TaxID=1895689 RepID=A0A1Q3VS10_9PROT) HSP 1 Score: 221 bits (562), Expect = 8.600e-64 Identity = 116/246 (47.15%), Postives = 156/246 (63.41%), Query Frame = 2
Query: 422 LIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAAGMDELVLG 1156
LI A+R L + + PV+ Y+ L+YAW P+EAY R+YG R R + +GMNPGP+GMVQ GVPFGE+D VRDW+G+ +G+P+ E+PKRPVEGF+C RSEVSG+RLW F+ RFGTADA+ + FV NYCPL F G N+TPD+LP E + AAC+ L ++AAL+P VIG+G F A+ +EA+ + + + V HPSPASP+ + W AA + G
Sbjct: 11 LIAAARTLSAAVDALPFA----PPVSHVYNPLDYAWAPHEAYLRRYGAQRK--RIVFLGMNPGPFGMVQCGVPFGEIDAVRDWMGIEAPIGKPARENPKRPVEGFACTRSEVSGRRLWSLFRERFGTADAFFAEHFVANYCPLAFFDH-GRNLTPDKLPAAEAAPLYAACDAHLRALVAALQPEWVIGIGAFAEARAVEALAGL---------PLRIGRVLHPSPASPAANRGWSEAATRQMVAQG 240
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 393.3 |
Seed ortholog evalue | 1.3e-106 |
Seed eggNOG ortholog | 2880.D8LKH1 |
Preferred name | SMUG1 |
KEGG ko | ko:K10800 |
KEGG Pathway | ko03410,map03410 |
Hectar predicted targeting category | chloroplast |
GOs | GO:0000702,GO:0000703,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0004844,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006220,GO:0006244,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006304,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0017065,GO:0018130,GO:0019104,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0031974,GO:0031981,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045008,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0070013,GO:0071704,GO:0072527,GO:0072529,GO:0090304,GO:0097159,GO:0097506,GO:0140097,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576 |
EggNOG free text desc. | single-strand selective uracil DNA N-glycosylase activity |
EggNOG OGs | 28KKK@1,2QT20@2759 |
Ec32 ortholog description | Uracil-DNA glycosylase-like |
Ec32 ortholog | Ec-16_002940.1 |
COG Functional cat. | S |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000,ko03400 |
Exons | 7 |
Model size | 2029 |
Cds size | 1095 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928876.427211-UTR-F-serratus_M_contig105:434419..435253 | 1622928876.427211-UTR-F-serratus_M_contig105:434419..435253 | Fucus serratus male | UTR | F-serratus_M_contig105 434420..435253 - |
1690962610.8066938-UTR-F-serratus_M_contig105:434419..435253 | 1690962610.8066938-UTR-F-serratus_M_contig105:434419..435253 | Fucus serratus male | UTR | F-serratus_M_contig105 434420..435253 - |
1622928876.5536208-UTR-F-serratus_M_contig105:444738..444838 | 1622928876.5536208-UTR-F-serratus_M_contig105:444738..444838 | Fucus serratus male | UTR | F-serratus_M_contig105 444739..444838 - |
1690962610.928376-UTR-F-serratus_M_contig105:444738..444838 | 1690962610.928376-UTR-F-serratus_M_contig105:444738..444838 | Fucus serratus male | UTR | F-serratus_M_contig105 444739..444838 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928876.4405816-CDS-F-serratus_M_contig105:435253..435430 | 1622928876.4405816-CDS-F-serratus_M_contig105:435253..435430 | Fucus serratus male | CDS | F-serratus_M_contig105 435254..435430 - |
1690962610.8329923-CDS-F-serratus_M_contig105:435253..435430 | 1690962610.8329923-CDS-F-serratus_M_contig105:435253..435430 | Fucus serratus male | CDS | F-serratus_M_contig105 435254..435430 - |
1622928876.460302-CDS-F-serratus_M_contig105:435622..435749 | 1622928876.460302-CDS-F-serratus_M_contig105:435622..435749 | Fucus serratus male | CDS | F-serratus_M_contig105 435623..435749 - |
1690962610.8557696-CDS-F-serratus_M_contig105:435622..435749 | 1690962610.8557696-CDS-F-serratus_M_contig105:435622..435749 | Fucus serratus male | CDS | F-serratus_M_contig105 435623..435749 - |
1622928876.4789596-CDS-F-serratus_M_contig105:435989..436062 | 1622928876.4789596-CDS-F-serratus_M_contig105:435989..436062 | Fucus serratus male | CDS | F-serratus_M_contig105 435990..436062 - |
1690962610.8782554-CDS-F-serratus_M_contig105:435989..436062 | 1690962610.8782554-CDS-F-serratus_M_contig105:435989..436062 | Fucus serratus male | CDS | F-serratus_M_contig105 435990..436062 - |
1622928876.4949782-CDS-F-serratus_M_contig105:436314..436378 | 1622928876.4949782-CDS-F-serratus_M_contig105:436314..436378 | Fucus serratus male | CDS | F-serratus_M_contig105 436315..436378 - |
1690962610.8931608-CDS-F-serratus_M_contig105:436314..436378 | 1690962610.8931608-CDS-F-serratus_M_contig105:436314..436378 | Fucus serratus male | CDS | F-serratus_M_contig105 436315..436378 - |
1622928876.5124607-CDS-F-serratus_M_contig105:437118..437250 | 1622928876.5124607-CDS-F-serratus_M_contig105:437118..437250 | Fucus serratus male | CDS | F-serratus_M_contig105 437119..437250 - |
1690962610.9013712-CDS-F-serratus_M_contig105:437118..437250 | 1690962610.9013712-CDS-F-serratus_M_contig105:437118..437250 | Fucus serratus male | CDS | F-serratus_M_contig105 437119..437250 - |
1622928876.5249474-CDS-F-serratus_M_contig105:439106..439267 | 1622928876.5249474-CDS-F-serratus_M_contig105:439106..439267 | Fucus serratus male | CDS | F-serratus_M_contig105 439107..439267 - |
1690962610.9096694-CDS-F-serratus_M_contig105:439106..439267 | 1690962610.9096694-CDS-F-serratus_M_contig105:439106..439267 | Fucus serratus male | CDS | F-serratus_M_contig105 439107..439267 - |
1622928876.5368433-CDS-F-serratus_M_contig105:444377..444738 | 1622928876.5368433-CDS-F-serratus_M_contig105:444377..444738 | Fucus serratus male | CDS | F-serratus_M_contig105 444378..444738 - |
1690962610.919273-CDS-F-serratus_M_contig105:444377..444738 | 1690962610.919273-CDS-F-serratus_M_contig105:444377..444738 | Fucus serratus male | CDS | F-serratus_M_contig105 444378..444738 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig105.515.1 >prot_F-serratus_M_contig105.515.1 ID=prot_F-serratus_M_contig105.515.1|Name=mRNA_F-serratus_M_contig105.515.1|organism=Fucus serratus male|type=polypeptide|length=365bp
MQSLLVLLISAINPQISSSFATISAAVLPRSAAARLTHVSPEAAPVMSTS TRIKKRPSRPGVSSECGPSAEPQPRQRRRLEEKAGLNPSDFGADAPSLET SLTDPNNLIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYT RQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRP SEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPL TFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFT GAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVKWERAAGMDELV LGCSKCKEIDRFLG* back to topmRNA from alignment at F-serratus_M_contig105:434420..444838- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig105.515.1 ID=mRNA_F-serratus_M_contig105.515.1|Name=mRNA_F-serratus_M_contig105.515.1|organism=Fucus serratus male|type=mRNA|length=10419bp|location=Sequence derived from alignment at F-serratus_M_contig105:434420..444838- (Fucus serratus male) AACAGAGTCTCCTTGGTTTTGGTGTAGTTGTTGGAGGCCATACCGCCTAG
GCAATGCCCCCCCGAGCAACACACCCTAGTCGCTCAATCCCGATTGGCAG
ATGCAGTCGCTTCTGGTGCTACTTATCTCCGCGATCAACCCACAAATCTC
ATCTTCCTTCGCCACTATCTCTGCAGCTGTATTACCGAGGTCTGCAGCTG
CCAGACTGACCCACGTTTCTCCAGAAGCTGCCCCTGTTATGTCTACAAGT
ACTCGAATAAAAAAGCGACCATCAAGGCCCGGAGTTAGCAGCGAATGCGG
GCCTTCGGCGGAGCCCCAACCTAGACAAAGAAGGCGTTTGGAAGAAAAAG
CAGGGCTAAATCCTTCAGATTTTGGAGCAGATGCTCCGTCGCTCGAGACT
TCGTTGACGGATCCCAACAATCTCATTATCGCATCGCGACGGCTGCACGA
ACGGCTCAAAGGTGATTCACGAAGTAGTGCAAGTTTTATATTTTTACGCA
GTGCAATCTTGCTTTCATGAAAAGCTGTACTCTACAGGCTGGGCTGGCCA
AGACGCTGTACACATGGCGGAATGGGATTTGCCACGCGGTTTTTACGAAT
TTTCACCAGAAATTTTGACACGTGATTTAGACCGCTCTTGCGGAGAGGTC
CACCCCTGCACATTTTGGTTTTAGTTTTTTTTCCGTAAGTTATGGTATGA
TAGCCGGATATAAGTGAATGTGGGAATATTTGTTTCGCGACGAAATGATG
GAAAAAATAAAAATAAATGTGCAGGGGTGGTCCTCTCCGCAAGAGCGGTC
TAAATCACGTGTCAAAATTTCAGGTGAAAAATCGTAAAAACCGCGTGGCA
AATCGCGATACCCCCACATTTCCTCAGTTCACTTGTGTTTTGTATCGGAA
TCTTTACGAGGCCGCAACTCTTGATAGAAAACGAGGCGAGCCTTGTAACT
ACCACCCACGCTCTTGCGGTGCTCCTGGATACGTGTACAACAATTTTAGT
ATAGGAAGTATCCTCCACTACGCCGCCAATTGGTCATTGTTTACCAAAAT
CAACTCGGATTCGAAAAATTCCGGCGCCTGCGCTTCCCTTTTTGCCGTAT
GGGAGCAGCCTCCGAATTTCAAGCTTTAACTCGTAGAAACTGCAGAGCGA
GACATGAACGAACAGAAGTCAGTTTCTTGGCCAGCCCAGCTTGTATTTAC
AAGATTACCTCAGCCCCTGCACTTCAAACCCAGTTGTACACAGACAGTAG
TAGTAAGACTACAGATTTTTAGTTAGAGTTGCATATTTTTGGCACTTTTA
TTTTGTGCGCGGGCACTCATTGGCCGAACTGACGGAGTATGATGACAGTG
CTGCTGATATCATCTTACACTGTTGTCTGTAGTATGTAGAGCTATACATA
TATGTACTGCTGCATTCATAGGACATAATGTGTACCGATAATGAATGGAC
GCCGCCGCGGAACTCGGGAGGAATCCCGTAAGCAAGCACTAGATTCAGCC
TGGAGTACAGTATGGAGATGAGCCGGCTGACGCGAGATGGGACCGCCGAA
CCCGTCTCGCGAGACCAAATTCTCAGGCGCGAACGGGGACGACAGCGAAA
AAATTATTTTCCCTGTATATGCATATCATACAGCAGTTAACCGTGCACGA
ATGTACTCGTCCCAAAATAAGAAATATACCTGGTATATAGACCAATACAA
CAGCAGTACTGTACCAGTACATCTTATGTACTTACCACGGATGCATCTGC
AAGAACACTTGATTTCCCTGTTGGTCCATATTACTCTGCTATAACTAAGT
GGTGACCGTACTTATTGGCTCTATACATAAATACATATAATCAGCAATAG
TAGTACCTGTCGGTTGTACTGATGCTAAATTCCATTGTTTTTTCTTGTAT
GGATGTATTTCCACCGGACTACAGTACAGCAGTTATGTCGATTTTGTGAG
GATTTGTACAAAATATCGAGTGTGATCTCTCCACGCGGATTTCAGAAACG
AATAGCGCCGACTTTTGATGGTGCCCGGGCTGAGACAGAAGCGTAAAACG
CCCAGATATATTTGAGCGATGACCGTAATTGGTTGGCGAGTGTGTGCATC
AAGCACGGTGTCTTCCAGTCGAGGCAAGTTTACCAGTACTAGGTGTAATA
GTACTTCGAAGTATCTTTCATACCCACCTACGTACCTTACCTTTCAAGCT
TTCGTTCTACAGTTATTTTTAGTACAAAGCACTATTTCCCCAACCCGCGT
GGTGTCCTCTTCTTCCGTGTCTGTGAAGAGGATCTTTGGTTACCGCACTC
GTCTCTTTCAAACCCTCGTTTCCACTCTCATTTAATTTAATGTCGTTGGA
CCCTAGAGGGCCTCCCCTAACTCGATTATCACCTCTTTTTCTTTGCGGAT
CTCACGGCACAGAAAATCCACAGAAATCGTGATTTCCGTTTCCCATAAAG
TGGGGTCACATAAAGCAAAACAAAAAAAATGGACAGAAATTGTGATATTT
TCGTGTTTCTCTTCTGACTTTTGATTCAGAGACGGTTTTATGGCAGACGG
TTTTTTCGAGTGTGATCAGCTGCGTGACTCGTTCGCGCGGCTCGGAGAAG
TTTAATCAAATCAATTGACTATGATGTACTTCAGTACCACATAGGCTTTT
ACCCATTCTGCTCGCAGAAAAAAGAGCAGATTGGCACGTTTAGTCATGCT
CGAGCAGAACTAAAAGCAGATCCGAAAAAAGAAGCAGAACCAGATCTGCT
CCAAGCATTTCCAGAAAATCAGAAGCATAGCAGTATTATAAAGAGCATAT
CTAGTATATGACGAGCAGATCGAGCATATAGTGGCTACGCTGCTAGCACA
TCTACTTCAATTTTGTGCAATAAGACTCCGGGCACCTCCGCAAAGTGTTT
AAATAGGTGATTATCAGCATAATTTGGAGACAGACATAACGACATAACCA
CAAATACACAATATATACCATATAAAAAAAAATTGAAAAAAAATTTGAAA
AAAAAATTTGAAATGTTTTTGAAATGTTTTTTTGAAAAAAACACAACGAG
CAGAAATCGAGCGGGCAATGACAAAAATAGGAATAATTGGCACATTTTAG
CGAGCAGAAGTGGAGCAGATCCGCCCGAAATAGCCCGAAATAAGCAGATG
TTACGAGCAGAAATGCATCCTGAAAGCAGTGCTCGGCCCAAAAAAGGAGC
AGAAAACACAAAAAAAAAAAAAGCAGAATGGGTAAAGGCCTAGTACCACA
CACTACTGTTGTTCTTTGTAATACTGTTATGTCTTTGTACTGTACATACT
CCTGTTACAAAAGTTGTGGTAAACAAAACGGGTGCTGTCTGTTCGGGAAA
ACCTATGAACCAATTTTCGTGCCCCCCCTCTTAGTACAGTACAGAGGACA
TGTGCGATGCAGAAAGACTGTATCGGAGAGGTGCCACATTCTGTAGACGT
AGAAAAGGCCAGCATGGGAGCAGGTGACCACTGAACCGATTACGCATCAG
CAGGTACAGACGGCAGTAGCTGTAGCTGTGTGTCAAGTGAGCCACTCACA
CTCGAAGCGGAAAGGTGAGAGCGTGCGCGTGGTCGAGAGAGGGCTGACTC
CCCGTAGATATTCCTGTGCACCGACAAAACCATGGCTCGGACTGATCTCC
ACTCGTTATTCGGGCTCGTCTGCCGAAGCATTCTCGACCGCGGTGCTCCG
TGTAATTTGACCGGGGGATCACAAGCATCAATATGGTGTCTGCTTCACAT
GCCCTAAACGCCCCCAAACCATGTTTCGCCCCCGTCGCCAAGCATCTCAA
AGACTTCAAACAACGCCGCCACCGTGATGACCACGGTGCGTAAAAGCTGT
CATGTTTGCGCCTGCCGCATTTGGTCCATGGGGTACACTAAGTAGGCAGC
ACCCATTACTCGACCTAATCTGAGAACTACTGGCCCTGTGTCGGCGGGCT
CTCATGAGTACGCCACTGCGTGACCTGATGACCTCGGGAATGACCCGATG
GCAGTCGGCGGTATACATATGTGTGACCATGCATACATCGACACCCTCGC
GGAAAGCAGGAATGATAGGAGCCCGTGAGTAAGGACCAAGTTCAGCGTGG
AGGTGGAGAATGAGCGGGCTGAGCCGGGACGGGACGGCCGAACCTCTTTC
ACGAGACCAAATTCTCAGGCGCAAACGGGTGGGCATGGAAAGTTCATGTG
ACCACGAGCAGGATTGGCAACCATATCCGGCTGATCCATACTCTGCTACA
TATAATGAATGAAAGCGACGACCAACCACACCAACAACATCCAGTTTTCC
GAACAAAGTACGATGACTGTAGTCAGTTTGTACTCTAGTCTCCGAGGACA
ACGTTAAATTCAAAGCAAACACAGATCACCATCACCATCAGCTGTGAACA
GCGTATGAGCCGTTCGTCGCATGGAGGGGAGGGGATGTCCTAAAATTGTC
CCCGAGTTCAGGGGGGACGTCACGGGAAAAGTTCTTCGACGGACACATCT
GACCAAACCCCTCTTTGAACATGAGTTGAGTTCGCGGCAAACTTGCCTAA
TCGATCATGTAGGGGATCATGCACTCCCATCCCCGGAAGGGCTGTTTTGG
TGACATCCCCGGAGACGGGTTCGACGATTCCCCCCTCTACCCCCCCCCCT
ATCCCCCATTCGTTAAACGATTCGTATGAGGGATCAGAAGGGGAGAGGAT
AGTACATGCCCTCGTGCAGGGGGCATCTTTTTGACGTTCGATTATATAGG
TATTTATCCTGCGCAATGGCGAATGACAATGGCTGCTTGACACTGGCTGC
TTTTGCTGGTTTGAGAAGCTTTCGACAGAGGTTGAGCTCTCCTGATTGCA
GAGAACGTAAAAGCCTTCGTTAAGTTCTTTCCTGTGCGGCCGACCTACCG
GACCGAGGCGCAAACACCGACCCGTCGTAAAAACGCTCCAAGCCGTCGTA
AAAACGCATCGACACTGTCAGTCCGAATTCCTGATATGCGGCAGGTATCA
CATCCATCATCCTGGCAAGCCCACGCAGCGATGTCGACGCCACCCCCGCA
TCGTCTGCATGCAGTATCCCATATACCGCTTGCAGAACCATTTTCAGAGT
TCCCTCCCTGGGCATGCCATCCGTGCCTTTTGGCACATCATCGAGGTACA
CCAAGTCTGAGACGATCACCGGGTCCGCCGTGAACCGCTGCGGAAGCACT
ATGATGACCGCCCCAAAGAAAATGTTGGACAAAAGTGGCGCTGGTACGCA
TCCTTGCCGAAGGCCCTGGCAGACATTGAACCACGCCGAGAAGTCTCCAT
CATCCAGCTGTACGCGAGCCCGCATACCATCGTGGAACATGCGGATGACC
TTCATCATCCGAGGCGTGCGCAAGAAATTTCGTAAGCTCGGGTCAAGATA
GTTGTGCGAGTCAACATATGGTGTTAGACGGAGCGCGTCTGCAAAAACCA
CCAAGGTGTTGACAGCCTTGCTGAAGACCGTCGATCTCCACCCCACTAAT
ACAATATTCCTCCACCGCTACCTCTGCCCTCTGTCCGTCGACGCCCTGTC
AACCGTCATCGCTTCACGAAGGCAAGACCTGGAAGGGCACGAAGAAGCAG
CCCGTGGCGTGCTCGTACGACGTGCTAGAGTACGCCTGGGATCCCTACGA
GGCCTACACTCGGCAGTACGGCGGGGGCAGAGCACTTGGTCGAGCCCTTG
TCGTGGGCATGAATCCCGGTCCGTGGGGGATGGTGAGTATGTATGTATGT
ATGTATGATAGTCATCACTTATATAGCAGATTTTGTATCAATCGGTATGG
TTGCCAATCCTGCTCGTGGTCAGCTGACTAGGTAAAACGTTTTTTTCCCT
GTTCCCGTTCGTGCCTGAGAATGTGGTCTCGTTAGACAGCTTCGGCCATC
GCGTCCCGCGTCAGCCTGCTCATTATCCATCGTCAGACTAAATCGAATGC
TTACTCGCGGGGTTTTTCCGCTTTCCACGACGGCATCTATAGTCTAGCGG
TCGTCGACCTAACGCTTGAGCAAGCAAGCAGTGCGCATGAGTCTGTTGTC
GAGAGTCCTCGAGGGCAAAATCGTTGGAAGAAAGCGATAAACAAAATGTA
TCTGCTTGTTGGCGATCTTGCGTTCCGACCAGCGCCTCTTGGTGTACGGT
GCGGCGCTATGCAGATGCGTGCGCGCTGTAGCTCTTTGAGGCGCGGATTC
GACGGCTTCGTCGACGTTCAGACTCGTGCCTTCGAGCACACTAAAGATGC
TATTCTTTATCACTGTCATTTTGGCGAGAGAAAGACGGGTTGATTGGTGG
TATCATAGTACAGAAAAAATAATCTGATGTATAAAAACAGCATTTTTGTC
CACCCTCCACCCTCGTCTTCATTTCAAGATACTTGTTTATATTGCGATCT
TGGAACCAAAAGCTGGTGGTCGGAGAGAGGTAAACATACACTGTAGACTG
TACTATAGACGGTTTTGACTCGCCCTCGCCTTCTTTGTCCTAGTATTGTG
ACCCTTTTGAGAAAAAGCAAGTTGTGATGGAAAATGTAACGGCAAATAAA
TGATGATCAAAGAACAAAGCGGCAATCAGTTTCCTACCGTAATTTCTACT
TCCACGTGCCTTATCTACCTCCAACCCTTCGAATCGAGTGTATCTACGGC
CATGGCAATATTCCACGGAATGTACACGATACAAGGCCTTCCACGAAGCT
TTGTAGTAAGGTCTTCTTAAGTTCGCATGTATGCTATGATAGTGCCTCTA
CACAAAGGAGGAAGATTGTACTACATGGTACTAAAAGTGAGATGTTTTAT
TCTACGTTGGACCTGGCAAGGGTTTTGTCGCGATTGGAATCCCTGTTAGT
TTGAGTATCGGGTTGTCACCATGACGTGGCCCGTTGACCTTCGTACCTCT
TTGTGACCACGAGCGAGACTGGCATTTGATAGGTCTAAGCTGACTTGCTG
TATCACCGTAGTTTCTTCGGTTGCAAGGACAATACGCTGGATGTGTGAAT
CAACAACATTAGCAACTGTTGCTTTAGAGTGCTGTGTGTGCTGCACTGCC
ATAATTGCCGCTTTTGTGTACTGCCTTTTTGTTTTTTTATGTACAAACAT
GATCTTGGACCCATGGATCTACACGCCACTGGCGCCACCAGAATGCTTGA
AGTAGGCTCTTTTGTCTAGGTAGTGCTGTCAAGCCGGCAGCTTTTTTGTC
TTGTTCACACGGTAGTTCCTCCGTTACAAAGGAAGGGTTATGACCCTGGT
TGGTACACCGCACCCACACCACCATATCTCAGAGTTGCGGACACGACATG
CTGTAAACAATGCTTGCCCTGCTTGCCTTTGGTATGGAGATCCTTCGCCT
ATACGTCGCGCCGGTGTGGGCTCCTGTTCCAGGGGACCAGGGCGTTCAGG
AGGAATTTTGTCGTTGTCCAAGGTCCCCGGTTTCTCCGGCCTACTTACTG
CAAACAAAGCCTCGGCTGTACATACTAATCCATATTTTTCTTACCAATTG
CAGCATTGGTGTGTAGTTTTCCACCTCTTCGTCGGGGCCGTCGTGGGCCC
CTTGCCCTATTTTGTCCACCGCGTGTTTTTGCTCTCAGGTGCAAACGGGA
GTTCCCTTCGGCGAAGTAGATCACGTCCGAGACTGGTTGGGGGTAAGCGG
AGTGGTGGGACGTCCGAGCGAGGAGCATCCCAAGAGGCCGGTGGAGGGCT
TTTCTTGCAAGCGGAGCGAGGTGACACGGCTCGGATTCGGTTGGGTTTCG
CCCCTGTGTTGCTCAGCTTCCTATAGGCAAGGCTGAGTCGCCAATCGTAT
TTTGCCGATAAAGAGACAACGCGCTGCATCCCTACAGGCTCCGAGCTGAA
GACTTGAGCTCATGTGTTTTGCTGTCTTTCTAAGAGCCTTTTTTTTCTGC
GTGTACCACTGAAAGTGTCTCTTTTTCGTTCGCAAGTGTTAACCATATTC
ATTTGCGTCCTCTATCAATAAATATCTATATTAACGGTGGTAACGGCTAC
TCTCGAGTACGCTTAAGCCTTACACTTGTATGAGAACGCCTCCTTTGCTC
TCCTATCCCTCATCGGGGAGAAAAGCCCTTCCATTTCTTTATAAAAAAAT
TACGAAGAAAATGGTTGGTAAAGGCCTTTTTCTGATACTTCAAAATTGTT
TTTCCAGACGATTTGTATGATAGCAACGCAGCCCCGATTTTCCTTGCGTT
TACGGAGAAAAGGGTCTTATGTTCATGTGTGTGTGTTGGAGGGGGTGCAG
GGGGGTGGTGATTTTTTCTCTGTTAGGGGAGGCATTCTCCAAGAACCATA
CAGCCACTGAAGCTTCGGTATAAAGGTCGCGTTGATGAAGGCGTCAAAGG
TGTGGTGACCTAACTCGCCTGGACATCCACGGCGTGGCCGTATCCCGGAG
AGCCTTGTGAATGTTTGGCTATAGCGTTTCGCCATTGCTGCCGGGCGCCT
TTCTTTCAAGGTCAGCGGGAAGCGCCTCTGGGGATTCTTCAAGCGAAGAT
TCGGGACGGCAGACGCGTGGGGAGGTGGGTGGGTGGTGCAGCTTCCGCTC
ACGTCACCCGACACTCGCTCGTGACGCGAATCATCCAAAAACTATCTGTA
GGGCGTCACACTCCCCGATCGAAGATGCATGCCGCCCCGAGCGGCGACAA
TCCCTTGGCGCTTTTCCAACCAGAAAGTGTTAACGCTTGTTTCTATCCCT
TCCTCGTCCCGTGCCTCGCCATCATTTATTTGACCTCGTGTCTAATGTTT
TTATCTTTCTTTATCCTTGCTTACAGATAAAATGTTCGTGTACAACTATT
GCCCCCTGACGTTCATGAGCTCTTCTGGTGGGAACATTACCCCCGACAGG
TGAACGATCCGCTGACCCGGAAGTGTTCTACGTTCGCCCCACCGTCGCAG
GCGTGTAGATGTGCCCGAACACAGATCAGTATCGATCATGGTCGACGTGC
AGCCACCCGTAGAACTGGGCGTAGCATGCGAGTCAACTCCAGCGGAATAA
GACTTACATTGTCTCCGTAAGTTATGCTCACAAAATTCCCCTCACACGCC
GCATTCCACTGCTCCACCGCCATGACTTGTCCGGAGAAGGTTGCCGCCAG
GCGAGCGTGAGGTCGTGGAAGCAGCGTGTAACGACGCCTTAGTGAAGATA
ATAGCGGCGCTGCGGCCGCGCGTTGTCATCGGCGTCGGAAAATTCACCGG
GGCCAAGTGTCTTGAGGTACTGTATGTGGTGGCGTAGACTTCCGTCGCTG
GTATCTTCCCTTATGTTTGATATGATAGGGCACTCCCTATTGTAAATGTA
TTACAACAGGTGTAGTAAGTTACCCTCTTTGCCGTGTTGGCTTCAGGCAC
AGAACCGTTTGGTGTTAACCAACTCAGCACTCCTTCCGTCCGGTACTTCA
CGTTGCAGGCGATGACTGCCATGGGTTCAGGGCCCAGAGGGGGCAACGTC
GAGGTGGAGGTTGTCGTGGTGAACCACCCGAGCCCGGCAAGCCCCAGTGG
GGTTAAGTGGGAGAGAGCAGCCGGTATGGACGAGCTTGTTCTCGGCTGCA
GCAAGTGCAAGGAAATAGATCGTTTTCTTGGATAGAGGAGTGTCTCAAAA
CGAACAATGAGTTAGTCGTTCATCGTCGCTCAAATCTGTGCGTCGGTTCT
ATAGAGTGCAAGATCGCGCCGGAAATTCATGATACGGCTGGACATTTATG
TGGCTTTCCTGCCTCCTCGGTTCTGCTTTGTTCGAATTGCGGTGATTTTT
TCGACTGGCGTATCGATATCGATGAATGGCGTCGGAAATTACCAACGTCT
GGTCCTGTACGAAGCAGTAAATACATCGGCAGACTCGGGGGGCTTCTCTC
CTTGAAGGACCACTAATTAGCAAAGGAATCGGTCGGACTATTCGAAGTCG
ATAAACTGGACTATTGTTGAGGCAAAACTGATCGGGGGGCACTATCTTGT
TGATATGCTCACCTATTTTTTTCTTGTTCGGGCTTTGACTGAATTCGTCT
AAGCTGGCCGGCTGTAGAGCTTTTTTAGTTTACCCCTCGTAGGCCTTTTT
CGTTTGTTTGTAGACATGCATAGTTTATCTGGTTGAAAGTCGTATGGTTG
CCATGAGGGCCATCGTTTGATTCCAGAATGTGGAGCGGGTAAATGTTACG
AATCGTAGTAGCTAGTTATGGAAGAACAACAGAAAGATAACGCCCGGGGA
CAAACACGCCATTCTACCAGAACCTTACTAAGGACGCGTTTGACAGCGTT
GAGACGGGTTTGGTCAGCCCCCATCCGCTCACTCCTCAATCTCCCTGACC
ACCACCCTATTTTACAGCTACTACATAACTGTAAACGGGTGCTGCCGACA
ATAAAAATAATTACAATATATTGAGCAGCGCCTTAGTAGCCCCTGGACCA
AGTGTCTATTAACTGGGCG back to topCoding sequence (CDS) from alignment at F-serratus_M_contig105:434420..444838- >mRNA_F-serratus_M_contig105.515.1 ID=mRNA_F-serratus_M_contig105.515.1|Name=mRNA_F-serratus_M_contig105.515.1|organism=Fucus serratus male|type=CDS|length=2190bp|location=Sequence derived from alignment at F-serratus_M_contig105:434420..444838- (Fucus serratus male) ATGCAGTCGCTTCTGGTGCTACTTATCTCCGCGATCAACCCACAAATCTC ATCTTCCTTCGCCACTATCTCTGCAGCTGTATTACCGAGGTCTGCAGCTG CCAGACTGACCCACGTTTCTCCAGAAGCTGCCCCTGTTATGTCTACAAGT ACTCGAATAAAAAAGCGACCATCAAGGCCCGGAGTTAGCAGCGAATGCGG GCCTTCGGCGGAGCCCCAACCTAGACAAAGAAGGCGTTTGGAAGAAAAAG CAGGGCTAAATCCTTCAGATTTTGGAGCAGATGCTCCGTCGCTCGAGACT TCGTTGACGGATCCCAACAATCTCATTATCGCATCGCGACGGCTGCACGA ACGGCTCAAAGATGCAGTCGCTTCTGGTGCTACTTATCTCCGCGATCAAC CCACAAATCTCATCTTCCTTCGCCACTATCTCTGCAGCTGTATTACCGAG GTCTGCAGCTGCCAGACTGACCCACGTTTCTCCAGAAGCTGCCCCTGTTA TGTCTACAAGTACTCGAATAAAAAAGCGACCATCAAGGCCCGGAGTTAGC AGCGAATGCGGGCCTTCGGCGGAGCCCCAACCTAGACAAAGAAGGCGTTT GGAAGAAAAAGCAGGGCTAAATCCTTCAGATTTTGGAGCAGATGCTCCGT CGCTCGAGACTTCGTTGACGGATCCCAACAATCTCATTATCGCATCGCGA CGGCTGCACGAACGGCTCAAAGGCAAGACCTGGAAGGGCACGAAGAAGCA GCCCGTGGCGTGCTCGTACGACGTGCTAGAGTACGCCTGGGATCCCTACG AGGCCTACACTCGGCAGTACGGCGGGGGCAGAGCACTTGGTCGAGCCCTT GTCGTGGGCATGAATCCCGGTCCGTGGGGGATGGCAAGACCTGGAAGGGC ACGAAGAAGCAGCCCGTGGCGTGCTCGTACGACGTGCTAGAGTACGCCTG GGATCCCTACGAGGCCTACACTCGGCAGTACGGCGGGGGCAGAGCACTTG GTCGAGCCCTTGTCGTGGGCATGAATCCCGGTCCGTGGGGGATGGTGCAA ACGGGAGTTCCCTTCGGCGAAGTAGATCACGTCCGAGACTGGTTGGGGGT AAGCGGAGTGGTGGGACGTCCGAGCGAGGAGCATCCCAAGAGGCCGGTGG AGGGCTTTTCTTGCAAGCGGAGCGAGGTGCAAACGGGAGTTCCCTTCGGC GAAGTAGATCACGTCCGAGACTGGTTGGGGGTAAGCGGAGTGGTGGGACG TCCGAGCGAGGAGCATCCCAAGAGGCCGGTGGAGGGCTTTTCTTGCAAGC GGAGCGAGGTCAGCGGGAAGCGCCTCTGGGGATTCTTCAAGCGAAGATTC GGGACGGCAGACGCGTGGGGAGGTCAGCGGGAAGCGCCTCTGGGGATTCT TCAAGCGAAGATTCGGGACGGCAGACGCGTGGGGAGATAAAATGTTCGTG TACAACTATTGCCCCCTGACGTTCATGAGCTCTTCTGGTGGGAACATTAC CCCCGACAGATAAAATGTTCGTGTACAACTATTGCCCCCTGACGTTCATG AGCTCTTCTGGTGGGAACATTACCCCCGACAGGTTGCCGCCAGGCGAGCG TGAGGTCGTGGAAGCAGCGTGTAACGACGCCTTAGTGAAGATAATAGCGG CGCTGCGGCCGCGCGTTGTCATCGGCGTCGGAAAATTCACCGGGGCCAAG TGTCTTGAGGTTGCCGCCAGGCGAGCGTGAGGTCGTGGAAGCAGCGTGTA ACGACGCCTTAGTGAAGATAATAGCGGCGCTGCGGCCGCGCGTTGTCATC GGCGTCGGAAAATTCACCGGGGCCAAGTGTCTTGAGGCGATGACTGCCAT GGGTTCAGGGCCCAGAGGGGGCAACGTCGAGGTGGAGGTTGTCGTGGTGA ACCACCCGAGCCCGGCAAGCCCCAGTGGGGTTAAGTGGGAGAGAGCAGCC GGTATGGACGAGCTTGTTCTCGGCTGCAGCAAGTGCAAGGAAATAGATCG TTTTCTTGGATAGGCGATGACTGCCATGGGTTCAGGGCCCAGAGGGGGCA ACGTCGAGGTGGAGGTTGTCGTGGTGAACCACCCGAGCCCGGCAAGCCCC AGTGGGGTTAAGTGGGAGAGAGCAGCCGGTATGGACGAGCTTGTTCTCGG CTGCAGCAAGTGCAAGGAAATAGATCGTTTTCTTGGATAG back to top
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