mRNA_F-serratus_M_contig105.504.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig105.504.1 vs. uniprot
Match: A0A0K9PP27_ZOSMR (Beta-phosphoglucomutase family hydrolase n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PP27_ZOSMR) HSP 1 Score: 99.4 bits (246), Expect = 4.040e-19 Identity = 77/272 (28.31%), Postives = 131/272 (48.16%), Query Frame = 3
Query: 624 VNEIMDPSNVQRHMYNTNPDSSFGAVFQLDTLVNVIPGLIYPAWLEVARALNQNAPSLNTVQRGYGWTPEQMFIRE-FNWRLSQEELEGG----IEIYDRTILRCALKYKPEEIPGSRRWLETLRRIPMPMAVLSRLPSSVVDLVLERTDLAGYFPHRVTKEDEPFDDYRGYMLAALKVQRSTMKCCAFDCRQEGMIKAHDAELRGVCKIGVMAAWELRLADYSVDSFDDMTVLDFRQIFADREFEPGMLALELEPEAA----PRRKTVVAT 1412
+N + +QR + PD +FG +F D +V L AW ++A ++ PS + VQR +++ W + EL+ +++Y ++ + KP E G R WL L +P AV+S L + LER DL YF +T ED ++ AA+K+ R KC F+ G+ AH+ + + IG A++L AD +V SF+D++V++ R++FA + G ++L+ +A PRRK +++
Sbjct: 97 LNNKLQECFLQRIRHAMKPDEAFGLIFSWDNVVAHTHSLKMDAWKKLAAEEGKDMPSESHVQRTMLHAAAYHVLKKVLFWGSDENELKRLNSRLLQLYHDNLINLS---KPME--GLREWLGALYTAGIPCAVVSCLDRKHMLESLERMDLKKYFQAVITDEDGMESIAHRFLSAAVKLDRKPSKCIVFEDDPRGVTAAHNCTMMAIALIGPHPAYDLVQADLAVASFNDLSVINLRRLFAHK----GPRFMDLQKQAIEDSRPRRKLTISS 359
BLAST of mRNA_F-serratus_M_contig105.504.1 vs. uniprot
Match: A0A2C9V235_MANES (Uncharacterized protein n=4 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9V235_MANES) HSP 1 Score: 99.0 bits (245), Expect = 5.470e-19 Identity = 68/245 (27.76%), Postives = 116/245 (47.35%), Query Frame = 3
Query: 624 VNEIMDPSNVQRHMYNTNPDSSFGAVFQLDTLVNVIPGLIYPAWLEVARALNQNAPSLNTVQRGYGWT-PEQMFIREFNWRLSQEELEGGIEIYDRTILRCALKYKP------EEIPGSRRWLETLRRIPMPMAVLSRLPSSVVDLVLERTDLAGYFPHRVTKEDEPFDDYRGYMLAALKVQRSTMKCCAFDCRQEGMIKAHDAELRGVCKIGVMAAWELRLADYSVDSFDDMTVLDFRQIFADR 1337
+N+ + ++R Y PD ++G +F D +V + W ++A + P QR + + + + +W ++ E+ DR LR + Y E I G + WL+ + R +P AV+S L + LER L YF VT+ED ++ AALK+ R KC F+ G+ AH+ + V IG A+EL AD +V SF++++V++ R++FA++
Sbjct: 100 LNDRLQEGFLKRIRYAMKPDEAYGLIFSWDNVVADTRAMKLNVWKQLASEEGKEIPDDGHAQRLMLYAGADHVLHKVLHWETAENEI-------DRLKLRLSQLYYDHLLRLRESIEGLKAWLDAVARARIPCAVVSSLDRVNMVGTLERMGLKNYFQAIVTEEDGMESIAHKFLSAALKLDRKPSKCVVFEDDPRGITAAHNCTMMAVALIGAHPAYELVQADLAVASFNELSVINLRRLFANK 337
BLAST of mRNA_F-serratus_M_contig105.504.1 vs. uniprot
Match: A0A2P2JTS3_RHIMU (Uncharacterized protein MANES_07G138100 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2JTS3_RHIMU) HSP 1 Score: 98.2 bits (243), Expect = 9.410e-19 Identity = 64/243 (26.34%), Postives = 117/243 (48.15%), Query Frame = 3
Query: 624 VNEIMDPSNVQRHMYNTNPDSSFGAVFQLDTLVNVIPGLIYPAWLEVARALNQNAPSLNTVQRGYGWT-PEQMFIREFNWRLSQEELEGG----IEIYDRTILRCALKYKPEEIPGSRRWLETLRRIPMPMAVLSRLPSSVVDLVLERTDLAGYFPHRVTKEDEPFDDYRGYMLAALKVQRSTMKCCAFDCRQEGMIKAHDAELRGVCKIGVMAAWELRLADYSVDSFDDMTVLDFRQIFADR 1337
+N+ + ++R Y PD ++G +F D +V + W ++A + P QR + + + + W +++ EL+ ++Y +LR A E I G + WL+ + + +P AV+S L + + LER L YF V ED ++ AA+K+ R KC F+ G+ AH+ + V IG A++L AD +V SF++++V++ R++FA++
Sbjct: 95 LNDRLQEGFLRRIRYAMKPDEAYGLIFSWDNVVTNTRAIKLNVWKQLASEEGEEIPEDEHTQRLLLYAGADHLLHKVLRWEIAESELDRLKLRLSQLYCDNLLRLA-----EPIEGLKEWLDAVCKAHIPCAVVSSLDRTNMVAALERMGLKKYFQAIVADEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGITAAHNCTMMAVALIGAHPAYDLVQADLAVASFNELSVINLRRLFANK 332
BLAST of mRNA_F-serratus_M_contig105.504.1 vs. uniprot
Match: A0A5N5F072_9ROSA (Pseudouridine-5'-monophosphatase-like n=9 Tax=Amygdaloideae TaxID=171637 RepID=A0A5N5F072_9ROSA) HSP 1 Score: 98.2 bits (243), Expect = 1.010e-18 Identity = 69/268 (25.75%), Postives = 127/268 (47.39%), Query Frame = 3
Query: 624 VNEIMDPSNVQRHMYNTNPDSSFGAVFQLDTLVNVIPGLIYPAWLEVARALNQNAPSLNTVQRGYGWT-PEQMFIREFNWRLSQEELEGGI----EIYDRTILRCALKYKPEEIPGSRRWLETLRRIPMPMAVLSRLPSSVVDLVLERTDLAGYFPHRVTKEDEPFDDYRGYMLAALKVQRSTMKCCAFDCRQEGMIKAHDAELRGVCKIGVMAAWELRLADYSVDSFDDMTVLDFRQIFADREFEPGMLALELEPEAAPRRKTVVAT 1412
+N+ + ++R Y PD ++G +F D +V + AW ++A + P +QR + + + + W EL+ ++Y +LR + E + G + WL+ + +P AV+S L + LER L YF VT+ED ++ AA+K+ R KC F+ G+ AH+ + V IG A++L AD +V SF++++V++ R++FA++ L ++ ++ P+RK + T
Sbjct: 101 LNDKLQEGFLKRIRYAMKPDEAYGLIFSFDNVVADTRTMKLNAWKQLASEEGKELPEDAVLQRRMLYAGADHVLHKLLLWDKEDGELDRLALKFSQLYYDNLLRLS-----EPVEGIKEWLDAVSTARIPCAVVSSLDRRNMTEALERMGLKKYFQAIVTEEDGMDSIAHRFLSAAVKLDRKPSKCVVFEDEPRGITAAHNCTMMAVALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMDLQKQIIEKSPPKRKLTIDT 363
BLAST of mRNA_F-serratus_M_contig105.504.1 vs. uniprot
Match: A0A2Z7BKT1_9LAMI (Uncharacterized protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BKT1_9LAMI) HSP 1 Score: 97.8 bits (242), Expect = 1.340e-18 Identity = 68/243 (27.98%), Postives = 117/243 (48.15%), Query Frame = 3
Query: 624 VNEIMDPSNVQRHMYNTNPDSSFGAVFQLDTLVNVIPGLIYPAWLEVARALNQNAPSLNTVQRGYGWTPEQMFIRE-FNWRLSQEELEGGIEIYDRTILRCALKYK------PEEIPGSRRWLETLRRIPMPMAVLSRLPSSVVDLVLERTDLAGYFPHRVTKEDEPFDDYRGYMLAALKVQRSTMKCCAFDCRQEGMIKAHDAELRGVCKIGVMAAWELRLADYSVDSFDDMTVLDFRQIFA 1331
+N+ M +QR Y PD ++G +F D +V L AW ++A + P ++VQR + +R+ W +++ +L DR LR + Y E I G + WL+ + +P AV+S L + LER L +F V++ED ++ AA+K+ R KC F+ G+ AH+ + + IG A++L AD +V SF++++V++ R++FA
Sbjct: 99 LNDRMQEGFLQRIRYAMKPDEAYGLIFSWDNVVANTRALKLNAWEKLASEEGKKIPRDDSVQRVLHYAGADHVLRKVLLWGMAEADL-------DRLKLRLSELYYHNLVELSEPIEGLKEWLDAIATSRIPCAVVSSLDRKNMVEALERMGLKKFFQAIVSEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGIAAAHNCTMMAIALIGAHPAYDLGQADLAVASFNELSVINLRRLFA 334 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig105.504.1 >prot_F-serratus_M_contig105.504.1 ID=prot_F-serratus_M_contig105.504.1|Name=mRNA_F-serratus_M_contig105.504.1|organism=Fucus serratus male|type=polypeptide|length=485bp MRSKHGSQGHEFSCAALVMAVAAAAATGGATAASAAATASAGAAGMQGVAback to top mRNA from alignment at F-serratus_M_contig105:241877..266765+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig105.504.1 ID=mRNA_F-serratus_M_contig105.504.1|Name=mRNA_F-serratus_M_contig105.504.1|organism=Fucus serratus male|type=mRNA|length=24889bp|location=Sequence derived from alignment at F-serratus_M_contig105:241877..266765+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig105:241877..266765+ >mRNA_F-serratus_M_contig105.504.1 ID=mRNA_F-serratus_M_contig105.504.1|Name=mRNA_F-serratus_M_contig105.504.1|organism=Fucus serratus male|type=CDS|length=2910bp|location=Sequence derived from alignment at F-serratus_M_contig105:241877..266765+ (Fucus serratus male)back to top |