mRNA_F-serratus_M_contig105.503.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig105.503.1 vs. uniprot
Match: A0A6P9EE40_JUGRE (sucrose transport protein SUC3-like n=11 Tax=Juglandaceae TaxID=16714 RepID=A0A6P9EE40_JUGRE) HSP 1 Score: 100 bits (248), Expect = 4.890e-18 Identity = 152/619 (24.56%), Postives = 247/619 (39.90%), Query Frame = 3 Query: 456 GLMFGWATKTVLTTPLFRDIYGVDTANLGFVWVAGPLSGLVVQPVIGVISDHREGQ-GQRSFFFAGGAVLMAASLALLPAAAIVWR--HSSSGHSSLENGTRVPVSRVASGTGLAVVALWMLDLAMNASLVAIRAVVADCAPPWQQAEANTVILISYGAGTLLGYAFGALDSAGWFGLRLEPFW--KTCMD--------FWVAAVFLLVS--AAVASVEAFRLEQSRERRSSGLFQALSTMEQEGPGGADRTRSEVTLGEGDGCCGVMYRGIPPLDDTTSPAQLCVAADEGILRXXXXXXXXXXXXXXDVCSAVEDSVRDQGAGGSGSPAWDGSINGARMASRGDDV--ERGKSLPEDVFAATAAVNMDVDLLGYAECEGEEQTIPARVQAPVTGGFTSEEAGTGDTGGKDESASSSLKVRIMDMMLFYDLPSWLRPVCFLLFCSWVGWFAVIIFGSDWVGVNIFGGDPSAPSGDDLHQAYQDGVAWASVGLAVQAVVVTA-----------MGCGPVTLL---VRTAGLRG-AFLAAISIQSACLLFATFLGQDAAGRISSLVIFAALGIPLALIETLPYMMVGIFSPRDSHGQ--LLGKLNVWIVLAQLALTLCIHP 2210 G+ FGWA + L TP + + G++ A F+W+ GP++GLVVQP +G+ SD + G+R F G+++++A++ L+ +A + + H S GTR+ + V ++ WMLDLA N RA++AD + P Q+ +N V G +LG++ GA S W R PF K C + F VA VFL + A + + L +R R S L ++Q G LD + S + L +A + G G + + ++ IN ++ S+ +D E P VF V+LL +SL+ LP + V ++ +W WF +F +DW+G ++ GDP D Q Y GV + GL + +VV+ MG V + V A + G A ++ +S++ +G AA RI++LV+FA LG PLA+ ++P+ + + GQ +G LN+ IV+ Q+ ++L P Sbjct: 70 GVQFGWALQLSLLTPYIQTL-GIEHAFSSFIWLCGPITGLVVQPCVGIWSDRCTSKYGRRRPFILIGSLMISAAVILIGFSADIGYLLGDTKEHCSTYKGTRMRAAIVF------IIGFWMLDLANNTVQGPARALLADLSGPDQRNSSNAVFCSWMAVGNILGFSAGA--SGNWH--RWFPFLTSKACCEACANLKAAFLVAVVFLTLCSLATLYFAKEVPLSVNRPHRLSDTLPLLDDIQQNG-----------------------------LDMSKSKSSLPIA--------------------------------NNGRGNNTAGDYERDINLTQLNSKVEDHHNENFSDGPGAVF---------VNLL------------------------------------------TSLR----------HLPLAMHSVLIVMALTWWSWFPFFLFDTDWMGREVYHGDPKGNLSDV--QRYNQGVREGAFGLLLNSVVLGISSFLIEPMCQWMGARLVWAMSNFVVFACMAGTAIISLVSVREYPEGIQHVIGGSAAIRIAALVLFALLGFPLAITYSVPFSVTAELTADSGGGQGMAIGVLNLAIVVPQMIVSLGAGP 553
BLAST of mRNA_F-serratus_M_contig105.503.1 vs. uniprot
Match: F4PLG0_CAVFA (Sucrose proton symporter n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PLG0_CAVFA) HSP 1 Score: 99.8 bits (247), Expect = 8.390e-18 Identity = 65/198 (32.83%), Postives = 104/198 (52.53%), Query Frame = 3 Query: 414 LTRAQLVRVASGMLGLMFGWATKTVLTTPLFRDIYGVDTANLGFVWVAGPLSGLVVQPVIGVISDHREGQ-GQRSFFFAGGAVLMAASLALLPAAAIVWRHSSSGHSSLENGTRVPVSRVASGTGLAVVALWMLDLAMNASLVAIRAVVADCAPPWQQAEANTVILISYGAGTLLGYAFGALDSAGWFGLRLEPFWKT 1004 L+ +L + LG+ FGWA + +TPLF ++ GV + + F+W+AGP+SGL+VQP++GV+SD E + G+R F G + +A L L+ A + G+ + +A++ W+LDL+ N RA++ D AP QQ +++ I G G LLGY G+L+ ++ PF KT Sbjct: 247 LSAFKLFALTVSFLGVQFGWALQIAFSTPLFLEL-GVPSFWVSFIWMAGPISGLIVQPIVGVVSDVSESKHGRRRPFIFFGTIFIAVGLLLVSNAQSI-------------GSIFGSDSKDASIFIAIIGFWILDLSNNVVQAPCRALLVDVAPTSQQGLGSSLFSIMLGIGNLLGYFMGSLNL-----VKALPFMKT 425
BLAST of mRNA_F-serratus_M_contig105.503.1 vs. uniprot
Match: A0A7J7CA43_TRIWF (Sucrose transport protein SUC3 isoform X1 n=4 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CA43_TRIWF) HSP 1 Score: 99.4 bits (246), Expect = 8.970e-18 Identity = 163/661 (24.66%), Postives = 269/661 (40.70%), Query Frame = 3 Query: 381 PSAVATRPAKGLTRAQLVRVASGMLGLMFGWATKTVLTTPLFRDIYGVDTANLGFVWVAGPLSGLVVQPVIGVISDHREGQ-GQRSFFFAGGAVLMAASLALLPAAAIVWR--HSSSGHSSLENGTRVPVSRVASGTGLAVVALWMLDLAMNASLVAIRAVVADCAPPWQQAEANTVILISYGAGTLLGYAFGALDSAGWFGLRLEPFWKT--CMDFW--VAAVFLLVSAAVASVEAFRLEQSRERRSSGLFQALSTMEQEGPGGADRTRSEVTLGEGDGCCGVMYRGIPPLDDTTSPAQLCVAADEGILRXXXXXXXXXXXXXXDVCSAVEDSVRDQGAGGSGSPAWDG-SINGARMASRGDDVERGKSLPEDVFAATAAVNMDVDLLGYAECEGEEQTIPARVQAPVTGGFTSEEAGTGDTGGKDESASSSLKVRIMDMMLFYDLPSWLRPVCFLLFCSWVGWFAVIIFGSDWVGVNIFGGDPSAPSGDDLHQAYQDGVAWASVGLAVQAVV--VTAMGCGP------------VTLLVRTAGLRG-AFLAAISIQSACLLFATFLGQDAAGRISSLVIFAALGIPLALIETLPYMMVGIFSPRDSHGQ--LLGKLNVWIVLAQLALTLCIHPI-VQHTQDSDSAVILAGSMAAAAGII 2285 P + ++P +T VA+G+ FGWA + L TP + + G+ A F+W+ GP++GLVVQP +G+ SD + G+R F G+++++ ++ ++ +A + + H S GTR + V V+ WMLDLA N RA++AD + P Q+ AN V G +LG++ GA S W R PF K+ C + + A FLL A F L T+ VT+ + PL P +L +A P DG NG +++ D + V A N+D +G+EQ + ++ P T S+ G D G ++ V ++ + LP + V ++ +W+ WF +F +DW+G ++ GDP S ++ Y GV + GL + +VV +++ P ++ V A + G A ++ ISI + + A +I+SLV+FA LG PLA+ ++P+ + + GQ +G LN+ IV+ Q+ ++L P + A +LA A AAG+I Sbjct: 61 PIPIRSKPCSMMTLILSCMVAAGV---QFGWALQLSLLTPYIQTL-GIGHAFSSFIWLCGPITGLVVQPCVGIWSDKCTSKYGRRRPFILAGSLMISMAVIIIGFSADIGYIIGDTKEHCSKFKGTRTRAAFVF------VIGFWMLDLANNTVQGPARALLADLSGPDQRNSANAVFCSWMAVGNILGFSAGA--SGNWH--RWFPFLKSRACCEACGNLKAAFLLAVA---------------------FLTLCTL--------------VTI---------YFAEEVPLT-LKQPNRLLDSA----------------------------------------PLLDGPKQNGLELSTLKQDGQ--------VVANMNGNNID---------DGDEQDVNSKQINPKT--EPSKNEGFNDGPG-------AVLVNLLTSLR--HLPPAMHSVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNSYEE--DLYNQGVREGAFGLLLNSVVLGISSFFIEPMCRRIGSRLVWAISNFVVFACMAGTAIISLISINDYSEKIEHVIEGNQAIKIASLVVFALLGFPLAITYSVPFSVTAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASFSAFAAGVI 592
BLAST of mRNA_F-serratus_M_contig105.503.1 vs. uniprot
Match: Q1WLP2_MANES (Sucrose transporter type 2 n=11 Tax=Crotonoideae TaxID=235631 RepID=Q1WLP2_MANES) HSP 1 Score: 99.0 bits (245), Expect = 1.170e-17 Identity = 145/630 (23.02%), Postives = 254/630 (40.32%), Query Frame = 3 Query: 387 AVATRPAKGLTRAQLVRVASGMLGLMFGWATKTVLTTPLFRDIYGVDTANLGFVWVAGPLSGLVVQPVIGVISDHREGQ-GQRSFFFAGGAVLMAASLALLPAAAIVWR--HSSSGHSSLENGTRVPVSRVASGTGLAVVALWMLDLAMNASLVAIRAVVADCAPPWQQAEANTVILISYGAGTLLGYAFGALDSAG-WFGLRLEPFWKTCMDFWVAAVFLLVSAAVASVEAFRLEQSRERRSSGLFQALSTMEQEGPGGADRTRSEVTLGEGDGCCGVMYRGIPPLDDTTSPAQLCVAADEGILRXXXXXXXXXXXXXXDVCSAVEDSVRDQGAGGSGSPAWDGSINGARMASRGDDVERGKSLPEDVFAATAAVNMDVDLLGYAECEGEEQTIPARVQAPVTGGFTSEEAGTGDTGGKDESASSSLKVRIMDMMLFYDLPSWLRPVCFLLFCSWVGWFAVIIFGSDWVGVNIFGGDPSAPSGDDLHQAYQDGVAWASVGLAVQAVVV---------TAMGCGPVTL------LVRTAGLRGAFLAAISIQSACLLFATFLGQDAAGRISSLVIFAALGIPLALIETLPYMMVGIFSPRDSHGQL---LGKLNVWIVLAQLALTLCIHP 2210 +V ++ K + L+ + G+ FGWA + L TP + + G++ A F+W+ GP++GLVVQP +G+ SD + G+R F G+++++ S+ ++ +A + + H S GTR + V V+ W+LDLA N RA++AD + P Q+ AN V G +LG++ GA S WF + + C + A L +A + +V +F L T+ VTL R +P + T+ +L D ++D+ + NG ++ D G +N +G EQ + + + G GD G ++ V ++ + LP + V ++ +W+ WF +F +DW+G ++ GDP S D + Y GV + GL + +VV+ GP + +V + A ++ ISI + + +G A+ I++L++FA LG PLA+ ++P+ + + DS G L +G LN+ IV+ Q+ ++L P Sbjct: 59 SVRSKATKHYSLITLILSCTVAAGVQFGWALQLSLLTPYIQTL-GIEHAFSSFIWLCGPITGLVVQPCVGIWSDKCTSKFGRRRPFILAGSLMISVSVIIIGFSADIGYILGDTKEHCSTFKGTRTRAAFVF------VIGFWLLDLANNTVQGPARALLADLSGPDQRNCANAVFCSWMAVGNILGFSAGASGSWNRWFPFLMS---RACCE----ACGNLKAAFLVAV---------------VFLTLCTL--------------VTL--------YFAREVPLI--TSESHRLS-----------------------DSAPLLDDTQQ----------------NGLELSKSKSDNSNGN------------IN-----------KGIEQNVNPKHGIANANSIEDQNEGLGDGPG-------AVLVNLLTSLR--HLPPGMHSVLVVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNS--DEAKFYDQGVREGAFGLLLNSVVLGISSFLIEPLCQRMGPRLVWAMSNYIVFASMAVTAIISLISISNILEVIEHVIGASASITIAALIVFALLGFPLAITYSVPFSVTSELT-ADSGGGLGLAIGLLNLAIVVPQMIISLGAGP 561
BLAST of mRNA_F-serratus_M_contig105.503.1 vs. uniprot
Match: A0A834Z4S6_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834Z4S6_9MAGN) HSP 1 Score: 98.6 bits (244), Expect = 1.520e-17 Identity = 149/634 (23.50%), Postives = 252/634 (39.75%), Query Frame = 3 Query: 456 GLMFGWATKTVLTTPLFRDIYGVDTANLGFVWVAGPLSGLVVQPVIGVISDHREGQ-GQRSFFFAGGAVLMAASLALLPAAAIVWR--HSSSGHSSLENGTRVPVSRVASGTGLAVVALWMLDLAMNASLVAIRAVVADCAPPWQQAEANTVILISYGAGTLLGYAFGALDSAGWFGLRLEPFWKT--CMDFWVAAVFLLVSAAVASVEAFRLEQSRERRSSGLFQALSTMEQEGPGGADRTRSEVTLGEGDGCCGVMYRGIPPLDDTTSPAQLCVAADEGILRXXXXXXXXXXXXXXDVCSAVEDSVRDQGAGGSGSPAWDGSINGARMASRGDDVERGKSLPEDVFAATAAVNMDVDLLGYAECEGEEQTIPARVQAPVTGGFTSEEAGTGDTGGKDESASSSLKVRIMDMMLFYDLPSWLRPVCFLLFCSWVGWFAVIIFGSDWVGVNIFGGDPSAPSGDDLHQAYQDGVAWASVGLAVQAVVVTAMGCGPVTLLVRTAGLR----------GAFLAAISIQSACLL------FATFLGQDAAGRISSLVIFAALGIPLALIETLPYMMVGIFSPRDSHGQ--LLGKLNVWIVLAQLALTLCIHPI-VQHTQDSDSAVILAGSMAAAAGII 2285 G+ FGWA + L TP + + G++ A F+W+ GP++GLVVQP +G+ SD + G+R F G+++++ ++ ++ +A + + H S GTR T + V+ WMLDLA N RA++AD + P Q+ AN + G +LG++ GA S W + PF K C D A L +A + +V +F L T+ VTL + +P + P +L +A P D + A S + + K +D A +VD + + +V+ F ++ V ++ + LP + V ++ SW+ WF +F +DW+G ++ GDP + QAY GV + GL + ++V+ + + + + G R A +AA +I S C +G + A R+++L++FA LG PL++ ++P+ M + GQ +G LN+ IV+ Q+ ++L P + A +LA A AAGII Sbjct: 73 GVQFGWALQLSLLTPYIQTL-GIEHAFSSFIWLCGPITGLVVQPCVGIWSDKCSSKYGRRRPFIFVGSLMISVAVTIIGFSADIGYLLGDTKQHCSKFKGTRTRA------TIIFVIGFWMLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSSGA--SGHWH--KWFPFLKNKACCD----ACGNLKAAFLVAV---------------VFLTLCTL--------------VTL--------YFAKEVPLV--ANQPHRLADSA----------------------------------------PLLDNTQQSASELSNSNSI---KLADDDASAVNGMSGKNVD--------ENAKHLNLKVEEDQNEIFND--------------GPGAVLVNLLTSLR--HLPPAMHSVLLVMALSWLSWFPFFLFDTDWMGREVYHGDPKGEI--SIAQAYDQGVREGAFGLLLNSIVL-GISSFLIEPMCQRMGARLVWAMSNFIVFACMAATAIISLCSFKESSEGIQQVIGGNKAIRVAALIVFALLGFPLSITYSVPFSMTADLTADTGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASISALAAGII 582 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig105.503.1 >prot_F-serratus_M_contig105.503.1 ID=prot_F-serratus_M_contig105.503.1|Name=mRNA_F-serratus_M_contig105.503.1|organism=Fucus serratus male|type=polypeptide|length=714bp MVESTGSINEGCRDDVDGVERWSEWTHCEQEPQGRPSAVATRPAKGLTRAback to top mRNA from alignment at F-serratus_M_contig105:222969..241752- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig105.503.1 ID=mRNA_F-serratus_M_contig105.503.1|Name=mRNA_F-serratus_M_contig105.503.1|organism=Fucus serratus male|type=mRNA|length=18784bp|location=Sequence derived from alignment at F-serratus_M_contig105:222969..241752- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig105:222969..241752- >mRNA_F-serratus_M_contig105.503.1 ID=mRNA_F-serratus_M_contig105.503.1|Name=mRNA_F-serratus_M_contig105.503.1|organism=Fucus serratus male|type=CDS|length=4284bp|location=Sequence derived from alignment at F-serratus_M_contig105:222969..241752- (Fucus serratus male)back to top |