mRNA_F-serratus_M_contig105.500.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig105.500.1
Unique NamemRNA_F-serratus_M_contig105.500.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig105.500.1 vs. uniprot
Match: D8LKE0_ECTSI (Thioredoxin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE0_ECTSI)

HSP 1 Score: 498 bits (1281), Expect = 3.650e-172
Identity = 254/337 (75.37%), Postives = 287/337 (85.16%), Query Frame = 3 
Query:  360 NLRDTIIIGSGPAGYTAALYAARAQMKPLMIAGVQWGGQLQLTSDVENFPGYAEAVSGPDLMEDLKRQAERFGTEMLYRDVTSVDVSKRPFRVSVRKRDFLARSLIIATGAEAIWLGAEGEEEVKGRGVSTCATCDGAFYEGKEAIV-GGGDSAMEEALFLTKFASKVTLIHRRAGFRASKIMLERVQDHPKIEIRLHRVVKRRAHRXXXXXXXXXVLAGAALENPRGDEGGGPKAEDFLPCSGAFLAVGHKPMTSFLRS-SHAAGALKEEGSPVEQRAMIELDEDGFIVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAEE 1364
            ++RDT+IIGSGPAGYTAALY ARAQMKPLMIAG Q GGQLQLTSDVENFPGYAEAVSGPDLMEDL++QAERFGTEM+YRDVTSVD+S+RPFRVSVRKR+F A+S+IIATGAEAIWLGAEGEE+VKGRGVSTCATCDGAFYEGKE +V GGGDSAMEEALFLTKFASKVT++HRR GFR+S+IMLERV+D+PKI ++LHR VK+              L+GA LE+PRG +     A + LPCSGAFLA+GHKPMT FL S S +              +++ELDEDGF+VHK+HTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAEE
Sbjct:   71 DVRDTVIIGSGPAGYTAALYTARAQMKPLMIAGFQHGGQLQLTSDVENFPGYAEAVSGPDLMEDLRKQAERFGTEMMYRDVTSVDLSRRPFRVSVRKREFFAKSIIIATGAEAIWLGAEGEEQVKGRGVSTCATCDGAFYEGKEVVVVGGGDSAMEEALFLTKFASKVTIVHRRDGFRSSRIMLERVKDNPKIHLKLHRTVKK-------WVSEGGDLSGAELEDPRGQD-----AVELLPCSGAFLAIGHKPMTKFLHSISSSXXXXXXXXXXXXXXSVVELDEDGFVVHKQHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAEE 395
[Close]
BLAST of mRNA_F-serratus_M_contig105.500.1 vs. uniprot
Match: A0A3A5V6W3_9ARCH (Thioredoxin-disulfide reductase n=12 Tax=Archaea TaxID=2157 RepID=A0A3A5V6W3_9ARCH)

HSP 1 Score: 375 bits (963), Expect = 2.430e-125
Identity = 196/337 (58.16%), Postives = 243/337 (72.11%), Query Frame = 3 
Query:  357 DNLRDTIIIGSGPAGYTAALYAARAQMKPLMIAGVQWGGQLQLTSDVENFPGYAEAVSGPDLMEDLKRQAERFGTEMLYRDVTSVDVSKRPFRVSVRKRDFLARSLIIATGAEAIWLGAEGEEEVKGRGVSTCATCDGAFYEGKEAIV-GGGDSAMEEALFLTKFASKVTLIHRRAGFRASKIMLERVQDHPKIEIRLHRVVKRRAHRXXXXXXXXXVLAGAALENPRGDEGGGPKAEDFLPCSGAFLAVGHKPMTSFLRSSHAAGALKEEGSPVEQRAMIELDEDGFIVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAEE 1364
            ++++  II+GSGPAGYTA LY+ARA + PLM AG   GGQL LTSDVENFPGY + + GP++M +++ QAERFG E+  ++V  VD+S+RPF V V   +F A SLII TGAEAIWLGAEGEEE KGRG+STCATCDGAF+  +E IV GGGDSAMEEA+FLT+FASKVT+IHRR  F+ASK+M ER  +HPKIEI+  R VK+              L GA LE+PR        +E+ + CSGAF+A+GHKP+TSFL                     +E D +G+IVHKE+TMT+V GVFA GDVVD+RYRQAI+AAGMGCQAAID E+WL E+
Sbjct:    3 EDVKSVIIVGSGPAGYTAGLYSARALLSPLMFAGYMSGGQLMLTSDVENFPGYPKGIGGPEMMVEMREQAERFGLEVQDKNVERVDLSQRPFSVWVEGEEFKAESLIICTGAEAIWLGAEGEEEQKGRGISTCATCDGAFFRDEEIIVVGGGDSAMEEAIFLTRFASKVTVIHRREVFKASKVMYERAAEHPKIEIKTFRQVKK-------WIAGDQGLIGAVLEDPRDG------SEEEISCSGAFIAIGHKPITSFLDDQ------------------LETDSEGYIVHKENTMTAVPGVFAAGDVVDKRYRQAITAAGMGCQAAIDAEKWLEEQ 308
[Close]
BLAST of mRNA_F-serratus_M_contig105.500.1 vs. uniprot
Match: A0A2E0PQV3_9EURY (Thioredoxin-disulfide reductase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E0PQV3_9EURY)

HSP 1 Score: 375 bits (962), Expect = 3.440e-125
Identity = 200/336 (59.52%), Postives = 246/336 (73.21%), Query Frame = 3 
Query:  360 NLRDTIIIGSGPAGYTAALYAARAQMKPLMIAGVQWGGQLQLTSDVENFPGYAEAVSGPDLMEDLKRQAERFGTEMLYRDVTSVDVSKRPFRVSVRKRDFLARSLIIATGAEAIWLGAEGEEEVKGRGVSTCATCDGAFYEGKEAIV-GGGDSAMEEALFLTKFASKVTLIHRRAGFRASKIMLERVQDHPKIEIRLHRVVKRRAHRXXXXXXXXXVLAGAALENPRGDEGGGPKAEDFLPCSGAFLAVGHKPMTSFLRSSHAAGALKEEGSPVEQRAMIELDEDGFIVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAEE 1364
            ++R+ II+GSGPAGYTA LY+ARA ++PLM AG   GGQL LTSDVENFPGY + + GP++M D++ QAERFG E+  ++V  VD+SKRPF V V   ++ A+SLII TGAEAIWLGA+GE+E KGRG+STCATCDGAF++ +E IV GGGDSAMEEA FLT+FASKVT+IHRR  FRASK+M ER  DHPKIEI+ HR VK               L GA LE+PR       K E+ + C+GAF+A+GHKP+T+FL           EG        +E D+ G+I+ +EHTMTSVEGVFA GDVVD RYRQAI+AAGMGCQAAID ERWL ++
Sbjct:    4 DVRNVIIVGSGPAGYTAGLYSARALLEPLMFAGYMSGGQLMLTSDVENFPGYPKGIGGPEMMIDMREQAERFGLEIQDKNVERVDLSKRPFTVWVEGEEYRAQSLIICTGAEAIWLGADGEDEQKGRGISTCATCDGAFFKDEEIIVVGGGDSAMEEATFLTRFASKVTIIHRRDVFRASKVMYERAADHPKIEIKTHRQVK-------SWVAGENGLEGAILEDPRDG-----KIEE-ITCTGAFIAIGHKPITAFL-----------EGQ-------LETDDSGYILPQEHTMTSVEGVFAAGDVVDTRYRQAITAAGMGCQAAIDAERWLEDQ 308
[Close]
BLAST of mRNA_F-serratus_M_contig105.500.1 vs. uniprot
Match: A0A327GYD5_9EURY (Thioredoxin-disulfide reductase n=3 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A327GYD5_9EURY)

HSP 1 Score: 374 bits (960), Expect = 6.910e-125
Identity = 197/334 (58.98%), Postives = 238/334 (71.26%), Query Frame = 3 
Query:  366 RDTIIIGSGPAGYTAALYAARAQMKPLMIAGVQWGGQLQLTSDVENFPGYAEAVSGPDLMEDLKRQAERFGTEMLYRDVTSVDVSKRPFRVSVRKRDFLARSLIIATGAEAIWLGAEGEEEVKGRGVSTCATCDGAFYEGKEAIV-GGGDSAMEEALFLTKFASKVTLIHRRAGFRASKIMLERVQDHPKIEIRLHRVVKRRAHRXXXXXXXXXVLAGAALENPRGDEGGGPKAEDFLPCSGAFLAVGHKPMTSFLRSSHAAGALKEEGSPVEQRAMIELDEDGFIVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAEE 1364
            R  IIIGSGPAGYTA LY ARA + PLM AG   GGQL LTSDVENFPGY + + GP++M D++ QAERFG E+  ++V  VDVSKRPFRV V  ++F A SLII TGAEAIWLGA+GEE  KGRG+STCATCDGAF+  +E IV GGGDSAMEEA FLT+FASKVT+IHRR  F+ASK+M ER  +HPKIEI+  R V+               L+GA LE+PR        +E+ + C+GAF+A+GHKP+T FL                     +E D DG++VHKE+TMTSV G+FA GDVVD+RYRQAI+AAGMGCQAAID ERWL ++
Sbjct:    6 RGVIIIGSGPAGYTAGLYTARALLNPLMFAGYMSGGQLMLTSDVENFPGYPQGIGGPEMMVDMREQAERFGLEVQDKNVERVDVSKRPFRVWVEGQEFSAESLIICTGAEAIWLGAKGEEGQKGRGISTCATCDGAFFRDEEIIVVGGGDSAMEEATFLTRFASKVTIIHRREVFKASKVMYERALNHPKIEIKTFRQVRE-------WVADDSGLSGALLEDPRDG------SEELINCTGAFIAIGHKPITGFLDGQ------------------LETDSDGYLVHKENTMTSVPGIFAAGDVVDKRYRQAITAAGMGCQAAIDAERWLEDQ 308
[Close]
BLAST of mRNA_F-serratus_M_contig105.500.1 vs. uniprot
Match: A0A822X8T3_9ARCH (Thioredoxin-disulfide reductase n=17 Tax=Archaea TaxID=2157 RepID=A0A822X8T3_9ARCH)

HSP 1 Score: 374 bits (959), Expect = 9.800e-125
Identity = 192/336 (57.14%), Postives = 238/336 (70.83%), Query Frame = 3 
Query:  351 LEDNLRDTIIIGSGPAGYTAALYAARAQMKPLMIAGVQWGGQLQLTSDVENFPGYAEAVSGPDLMEDLKRQAERFGTEMLYRDVTSVDVSKRPFRVSVRKRDFLARSLIIATGAEAIWLGAEGEEEVKGRGVSTCATCDGAFYEGKEAIV-GGGDSAMEEALFLTKFASKVTLIHRRAGFRASKIMLERVQDHPKIEIRLHRVVKRRAHRXXXXXXXXXVLAGAALENPRGDEGGGPKAEDFLPCSGAFLAVGHKPMTSFLRSSHAAGALKEEGSPVEQRAMIELDEDGFIVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWL 1355
            +   + + IIIGSGPAGYTA LY+ARA MKP+M AG   GGQL LTSD+ENFPGY + + GP++M DL+ QAERFG E++ ++V  VD S RPF++ V   +F A ++II TGAEAIWLGAEGE+E KGRG+STCATCDGAF+ G E IV GGGDSAMEEA FLT+FA KVT++HRR  FRASK+MLER ++HPKIEI+ HR VK               L GA LE+ R        + + + C+GAF+A+GH+P+T FL                     +E+D++G+I+H EHTMTSV GVFA GDVVD RYRQAI+AAGMGCQAAID ERWL
Sbjct:    1 MSQTVHNVIIIGSGPAGYTAGLYSARAMMKPMMFAGYMSGGQLMLTSDIENFPGYPKGIGGPEMMIDLRSQAERFGLEVIDKNVEKVDFSSRPFKIWVEGEEFRAETVIICTGAEAIWLGAEGEQEQKGRGISTCATCDGAFFRGDEVIVVGGGDSAMEEATFLTRFAEKVTIVHRRDVFRASKVMLERAKNHPKIEIKTHRQVKE-------WLSDDKGLTGAVLEDSRDG------SLEEIECAGAFIAIGHRPITEFLGGQ------------------VEMDKEGYILHSEHTMTSVPGVFAAGDVVDTRYRQAITAAGMGCQAAIDAERWL 305
[Close]
BLAST of mRNA_F-serratus_M_contig105.500.1 vs. uniprot
Match: A0A7C7ZC26_9ARCH (Thioredoxin-disulfide reductase n=5 Tax=root TaxID=1 RepID=A0A7C7ZC26_9ARCH)

HSP 1 Score: 374 bits (959), Expect = 9.800e-125
Identity = 194/339 (57.23%), Postives = 235/339 (69.32%), Query Frame = 3 
Query:  351 LEDNLRDTIIIGSGPAGYTAALYAARAQMKPLMIAGVQWGGQLQLTSDVENFPGYAEAVSGPDLMEDLKRQAERFGTEMLYRDVTSVDVSKRPFRVSVRKRDFLARSLIIATGAEAIWLGAEGEEEVKGRGVSTCATCDGAFYEGKEAIV-GGGDSAMEEALFLTKFASKVTLIHRRAGFRASKIMLERVQDHPKIEIRLHRVVKRRAHRXXXXXXXXXVLAGAALENPRGDEGGGPKAEDFLPCSGAFLAVGHKPMTSFLRSSHAAGALKEEGSPVEQRAMIELDEDGFIVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAEE 1364
            ++D + + IIIGSGPAGYTA LYAARA + PLM AG   GGQL LTSDVENFPGY   + GPD+M  ++ QAERFG E+  ++V  VD S+RPF + V   ++   S+II TGAEAIWLG EGEE  KGRG+STCATCDGAF+  +E IV GGGDSAMEEA FLT+FASKVT+IHRR GFRASK+M ER   HPKI+I  HR +KR              L+GA LE+PR        +E  + C+GAF+A+GHKPMT FL                     +E+DE G+I+H EHTMTS  GVFA GDVVD+RYRQAI+AAGMGCQAA+D E+WL E+
Sbjct:    1 MDDGVHNVIIIGSGPAGYTAGLYAARAMLDPLMFAGYMSGGQLMLTSDVENFPGYPSGIGGPDMMVHMREQAERFGLEIQDKNVERVDFSERPFGIWVEGEEYRTESVIICTGAEAIWLGVEGEEAQKGRGISTCATCDGAFFRDQEVIVVGGGDSAMEEATFLTRFASKVTIIHRREGFRASKVMYERAVSHPKIDIMTHRHIKR-------WLSDENGLSGAILEDPRDG------SEQEIACTGAFIAIGHKPMTGFLDGE------------------VEMDESGYILHSEHTMTSTPGVFAAGDVVDKRYRQAITAAGMGCQAAMDVEKWLEEQ 308
[Close]
BLAST of mRNA_F-serratus_M_contig105.500.1 vs. uniprot
Match: A0A2D5KJQ5_9EURY (Thioredoxin-disulfide reductase n=3 Tax=Archaea TaxID=2157 RepID=A0A2D5KJQ5_9EURY)

HSP 1 Score: 373 bits (958), Expect = 1.390e-124
Identity = 197/339 (58.11%), Postives = 242/339 (71.39%), Query Frame = 3 
Query:  351 LEDNLRDTIIIGSGPAGYTAALYAARAQMKPLMIAGVQWGGQLQLTSDVENFPGYAEAVSGPDLMEDLKRQAERFGTEMLYRDVTSVDVSKRPFRVSVRKRDFLARSLIIATGAEAIWLGAEGEEEVKGRGVSTCATCDGAFYEGKEAIV-GGGDSAMEEALFLTKFASKVTLIHRRAGFRASKIMLERVQDHPKIEIRLHRVVKRRAHRXXXXXXXXXVLAGAALENPRGDEGGGPKAEDFLPCSGAFLAVGHKPMTSFLRSSHAAGALKEEGSPVEQRAMIELDEDGFIVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAEE 1364
            + D++R+TIIIGSGPAGYTA LY ARA ++PLM AG   GGQL LTSD+ENFPGY + + GP++M  L+ QAERFG E+  R+V  VDVS+RPF+V V   +FLA +LII TGAEAIWLGAEGE+  KGRG+STCATCDGAF+  +E IV GGGDSAMEEA FLT+FASKVT+IHRR  FRASK+M +R  +HPKIEI+  R VK+              L GA LE+ R        + + + C+GAF+A+GHKP+T+FL +                   IE D+ G+IV KEHTMTS+ GVFA GDVVD RYRQAI+AAGMGCQAAID ERWL ++
Sbjct:    1 MSDDVRNTIIIGSGPAGYTAGLYTARAMLEPLMFAGYASGGQLMLTSDIENFPGYPQGIGGPEMMMQLREQAERFGLEVHDRNVEKVDVSERPFKVWVEGEEFLAETLIICTGAEAIWLGAEGEDAQKGRGISTCATCDGAFFRDEEIIVVGGGDSAMEEATFLTRFASKVTVIHRRDVFRASKVMYDRAANHPKIEIKTFRSVKK-------WLSDEKGLTGAVLEDTRDG------STEEISCTGAFIAIGHKPITTFLDNQ------------------IETDDSGYIVPKEHTMTSIPGVFAAGDVVDTRYRQAITAAGMGCQAAIDAERWLEDQ 308
[Close]
BLAST of mRNA_F-serratus_M_contig105.500.1 vs. uniprot
Match: A0A2E4JVE5_9EURY (Thioredoxin-disulfide reductase n=5 Tax=unclassified Euryarchaeota TaxID=115531 RepID=A0A2E4JVE5_9EURY)

HSP 1 Score: 373 bits (958), Expect = 1.440e-124
Identity = 194/341 (56.89%), Postives = 246/341 (72.14%), Query Frame = 3 
Query:  351 LEDNLRDTIIIGSGPAGYTAALYAARAQMKPLMIAGVQWGGQLQLTSDVENFPGYAEAVSGPDLMEDLKRQAERFGTEMLYRDVTSVDVSKRPFRVSVRKRDFLARSLIIATGAEAIWLGAEGEEEVKGRGVSTCATCDGAFYEGKEAIV-GGGDSAMEEALFLTKFASKVTLIHRRAGFRASKIMLERVQDHPKIEIRLHRVVKRRAHRXXXXXXXXXVLAGAALENPRGDEGGGPKAEDFLPCSGAFLAVGHKPMTSFLRSSHAAGALKEEGSPVEQRAMIELDEDGFIVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAEEGQ 1370
            + D  R+ II+GSGPAGYTA LYAARA ++PLM AG   GGQL LTSDVENFPGY + + GP++M D++ QAERFG E+  ++V  +D+S+RPF+V V   +F + SLII TGAEAIWLGA+GEE+ KGRG+STCATCDGAF+  +E IV GGGDSAMEEA FLT+FASKVT+IHRR  F+ASK+M+ER + HPKIEI+  + +K               L GA LE+PR        +E+ + C+GAF+A+GHKP+T FL           EG        +E DE+G++VH E+TMT++ GVFA GDVVD+RYRQAI+AAGMGCQAAID ERWL E+ Q
Sbjct:    1 MRDGARNVIIVGSGPAGYTAGLYAARALLEPLMFAGYMSGGQLMLTSDVENFPGYPKGIGGPEMMVDMREQAERFGLEVHDKNVERLDLSERPFKVWVEGEEFRSESLIICTGAEAIWLGAKGEEDQKGRGISTCATCDGAFFRDEEIIVIGGGDSAMEEATFLTRFASKVTIIHRRDVFKASKVMIERAESHPKIEIKTFKQIKE-------WLSDENGLTGAILEDPRDG------SEESIRCAGAFIAIGHKPITGFL-----------EGQ-------LETDEEGYLVHIENTMTAISGVFAAGDVVDKRYRQAITAAGMGCQAAIDAERWLEEQHQ 310
[Close]
BLAST of mRNA_F-serratus_M_contig105.500.1 vs. uniprot
Match: A0A367I1M9_9ARCH (Thioredoxin-disulfide reductase n=4 Tax=Archaea TaxID=2157 RepID=A0A367I1M9_9ARCH)

HSP 1 Score: 372 bits (955), Expect = 3.950e-124
Identity = 196/339 (57.82%), Postives = 242/339 (71.39%), Query Frame = 3 
Query:  351 LEDNLRDTIIIGSGPAGYTAALYAARAQMKPLMIAGVQWGGQLQLTSDVENFPGYAEAVSGPDLMEDLKRQAERFGTEMLYRDVTSVDVSKRPFRVSVRKRDFLARSLIIATGAEAIWLGAEGEEEVKGRGVSTCATCDGAFYEGKEAIV-GGGDSAMEEALFLTKFASKVTLIHRRAGFRASKIMLERVQDHPKIEIRLHRVVKRRAHRXXXXXXXXXVLAGAALENPRGDEGGGPKAEDFLPCSGAFLAVGHKPMTSFLRSSHAAGALKEEGSPVEQRAMIELDEDGFIVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAEE 1364
            + D +R+ IIIGSGPAGYTA LY+ARA ++PLM AG   GGQL LTSDVENFPGY + + GPD+M  L+ QAERFG E+  ++V  VDVS+RPF+V V   +F A++LII TGAEAIWLG EGE+  KGRG+STCATCDGAF+  +E IV GGGDSAMEEA FLT+FASKVT++HRR  FRASK+M +R  +HPKIEI+  R VK+              L GA LE+PR        + + + C+GAF+A+GH P+TSFL           EG        +E+DE G+I+H EHTMTSV GVFA GDVVD RYRQA++AAGMGCQAAID ERWL ++
Sbjct:    1 MSDEVRNAIIIGSGPAGYTAGLYSARAMLEPLMFAGYASGGQLMLTSDVENFPGYPQGIGGPDMMIQLREQAERFGLEVHDKNVERVDVSERPFKVWVEGEEFRAQTLIICTGAEAIWLGVEGEDAQKGRGISTCATCDGAFFRDEEIIVVGGGDSAMEEATFLTRFASKVTIVHRRDVFRASKVMYDRAAEHPKIEIKTFRSVKQ-------WLSDENGLTGALLEDPRDG------STEEIACNGAFIAIGHTPITSFL-----------EGQ-------VEIDESGYILHHEHTMTSVPGVFAAGDVVDTRYRQAVTAAGMGCQAAIDAERWLEDQ 308
[Close]
BLAST of mRNA_F-serratus_M_contig105.500.1 vs. uniprot
Match: A0A367I9L2_9ARCH (Thioredoxin-disulfide reductase n=13 Tax=Archaea TaxID=2157 RepID=A0A367I9L2_9ARCH)

HSP 1 Score: 371 bits (952), Expect = 1.200e-123
Identity = 195/336 (58.04%), Postives = 239/336 (71.13%), Query Frame = 3 
Query:  357 DNLRDTIIIGSGPAGYTAALYAARAQMKPLMIAGVQWGGQLQLTSDVENFPGYAEAVSGPDLMEDLKRQAERFGTEMLYRDVTSVDVSKRPFRVSVRKRDFLARSLIIATGAEAIWLGAEGEEEVKGRGVSTCATCDGAFYEGKEAIV-GGGDSAMEEALFLTKFASKVTLIHRRAGFRASKIMLERVQDHPKIEIRLHRVVKRRAHRXXXXXXXXXVLAGAALENPRGDEGGGPKAEDFLPCSGAFLAVGHKPMTSFLRSSHAAGALKEEGSPVEQRAMIELDEDGFIVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAE 1361
            +++ + IIIGSGPAGYTA LY ARA ++PLM AG   GGQL LTSD+ENFPGY + + GP++M  L+ QAERFG ++  ++V  +D S +P+ V V   +  A +LII TGAEAIWLG EGEEE KGRG+STCATCDGAF+  +E IV GGGDSAMEEA FLT+FASKVTLIHRR  FRASK+MLER ++HPKIEIR  R VK+              L+GA LE+PR        + + + C+GAF+A+GHKP+T FL           EG        IE D+ G+I+HK+HTMTSV GVFA GDVVD RYRQAI+AAGMGCQAAIDCE+WL E
Sbjct:    4 ESIHNVIIIGSGPAGYTAGLYGARAMLEPLMFAGYMSGGQLMLTSDIENFPGYPQGIGGPEMMMQLREQAERFGLKVEDKNVERIDTSSQPYSVWVEGEEHKAHALIICTGAEAIWLGVEGEEEQKGRGISTCATCDGAFFRDEEIIVIGGGDSAMEEATFLTRFASKVTLIHRRDVFRASKVMLERAENHPKIEIRTFRQVKK-------WLSDEKGLSGAILEDPRDG------STEEIACTGAFIAIGHKPITGFL-----------EGQ-------IETDDSGYIIHKDHTMTSVSGVFAAGDVVDTRYRQAITAAGMGCQAAIDCEKWLEE 308
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.500.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKE0_ECTSI3.650e-17275.37Thioredoxin reductase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A3A5V6W3_9ARCH2.430e-12558.16Thioredoxin-disulfide reductase n=12 Tax=Archaea T... [more]
A0A2E0PQV3_9EURY3.440e-12559.52Thioredoxin-disulfide reductase n=1 Tax=Euryarchae... [more]
A0A327GYD5_9EURY6.910e-12558.98Thioredoxin-disulfide reductase n=3 Tax=Euryarchae... [more]
A0A822X8T3_9ARCH9.800e-12557.14Thioredoxin-disulfide reductase n=17 Tax=Archaea T... [more]
A0A7C7ZC26_9ARCH9.800e-12557.23Thioredoxin-disulfide reductase n=5 Tax=root TaxID... [more]
A0A2D5KJQ5_9EURY1.390e-12458.11Thioredoxin-disulfide reductase n=3 Tax=Archaea Ta... [more]
A0A2E4JVE5_9EURY1.440e-12456.89Thioredoxin-disulfide reductase n=5 Tax=unclassifi... [more]
A0A367I1M9_9ARCH3.950e-12457.82Thioredoxin-disulfide reductase n=4 Tax=Archaea Ta... [more]
A0A367I9L2_9ARCH1.200e-12358.04Thioredoxin-disulfide reductase n=13 Tax=Archaea T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig105contigF-serratus_M_contig105:97339..106575 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score497.7
Seed ortholog evalue5.2e-138
Seed eggNOG ortholog2880.D8LKE0
KEGG rclassRC00013,RC02518,RC02873
KEGG koko:K00384
KEGG ReactionR02016,R03596,R09372
KEGG Pathwayko00450,map00450
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.thioredoxin-disulfide reductase activity
EggNOG OGsCOG0492@1,KOG0404@2759
Ec32 ortholog descriptionPyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
Ec32 orthologEc-16_002640.1
EC1.8.1.9
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons7
Model size1373
Cds size1209
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig105.500.1prot_F-serratus_M_contig105.500.1Fucus serratus malepolypeptideF-serratus_M_contig105 97339..106411 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928874.0844455-CDS-F-serratus_M_contig105:97338..977131622928874.0844455-CDS-F-serratus_M_contig105:97338..97713Fucus serratus maleCDSF-serratus_M_contig105 97339..97713 -
1690962609.6601183-CDS-F-serratus_M_contig105:97338..977131690962609.6601183-CDS-F-serratus_M_contig105:97338..97713Fucus serratus maleCDSF-serratus_M_contig105 97339..97713 -
1622928874.0979822-CDS-F-serratus_M_contig105:98188..983291622928874.0979822-CDS-F-serratus_M_contig105:98188..98329Fucus serratus maleCDSF-serratus_M_contig105 98189..98329 -
1690962609.6732163-CDS-F-serratus_M_contig105:98188..983291690962609.6732163-CDS-F-serratus_M_contig105:98188..98329Fucus serratus maleCDSF-serratus_M_contig105 98189..98329 -
1622928874.1116068-CDS-F-serratus_M_contig105:98835..988971622928874.1116068-CDS-F-serratus_M_contig105:98835..98897Fucus serratus maleCDSF-serratus_M_contig105 98836..98897 -
1690962609.6827133-CDS-F-serratus_M_contig105:98835..988971690962609.6827133-CDS-F-serratus_M_contig105:98835..98897Fucus serratus maleCDSF-serratus_M_contig105 98836..98897 -
1622928874.1245508-CDS-F-serratus_M_contig105:99146..992741622928874.1245508-CDS-F-serratus_M_contig105:99146..99274Fucus serratus maleCDSF-serratus_M_contig105 99147..99274 -
1690962609.6925852-CDS-F-serratus_M_contig105:99146..992741690962609.6925852-CDS-F-serratus_M_contig105:99146..99274Fucus serratus maleCDSF-serratus_M_contig105 99147..99274 -
1622928874.1374302-CDS-F-serratus_M_contig105:104266..1043641622928874.1374302-CDS-F-serratus_M_contig105:104266..104364Fucus serratus maleCDSF-serratus_M_contig105 104267..104364 -
1690962609.7051392-CDS-F-serratus_M_contig105:104266..1043641690962609.7051392-CDS-F-serratus_M_contig105:104266..104364Fucus serratus maleCDSF-serratus_M_contig105 104267..104364 -
1622928874.1522217-CDS-F-serratus_M_contig105:104699..1047921622928874.1522217-CDS-F-serratus_M_contig105:104699..104792Fucus serratus maleCDSF-serratus_M_contig105 104700..104792 -
1690962609.7156196-CDS-F-serratus_M_contig105:104699..1047921690962609.7156196-CDS-F-serratus_M_contig105:104699..104792Fucus serratus maleCDSF-serratus_M_contig105 104700..104792 -
1622928874.1632075-CDS-F-serratus_M_contig105:106099..1064111622928874.1632075-CDS-F-serratus_M_contig105:106099..106411Fucus serratus maleCDSF-serratus_M_contig105 106100..106411 -
1690962609.7252417-CDS-F-serratus_M_contig105:106099..1064111690962609.7252417-CDS-F-serratus_M_contig105:106099..106411Fucus serratus maleCDSF-serratus_M_contig105 106100..106411 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928874.1759014-UTR-F-serratus_M_contig105:106411..1065751622928874.1759014-UTR-F-serratus_M_contig105:106411..106575Fucus serratus maleUTRF-serratus_M_contig105 106412..106575 -
1690962609.732794-UTR-F-serratus_M_contig105:106411..1065751690962609.732794-UTR-F-serratus_M_contig105:106411..106575Fucus serratus maleUTRF-serratus_M_contig105 106412..106575 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig105.500.1

>prot_F-serratus_M_contig105.500.1 ID=prot_F-serratus_M_contig105.500.1|Name=mRNA_F-serratus_M_contig105.500.1|organism=Fucus serratus male|type=polypeptide|length=403bp
MLRTLSAAGATVAYQFRRPKTLTLNRPGDGNGLAWTIRSSLQLRVCQPRH
RSLSAASTSPNPLEDNLRDTIIIGSGPAGYTAALYAARAQMKPLMIAGVQ
WGGQLQLTSDVENFPGYAEAVSGPDLMEDLKRQAERFGTEMLYRDVTSVD
VSKRPFRVSVRKRDFLARSLIIATGAEAIWLGAEGEEEVKGRGVSTCATC
DGAFYEGKEAIVGGGDSAMEEALFLTKFASKVTLIHRRAGFRASKIMLER
VQDHPKIEIRLHRVVKRRAHRRRGGGRGGGVLAGAALENPRGDEGGGPKA
EDFLPCSGAFLAVGHKPMTSFLRSSHAAGALKEEGSPVEQRAMIELDEDG
FIVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAEE
GQ*
back to top

mRNA from alignment at F-serratus_M_contig105:97339..106575-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig105.500.1 ID=mRNA_F-serratus_M_contig105.500.1|Name=mRNA_F-serratus_M_contig105.500.1|organism=Fucus serratus male|type=mRNA|length=9237bp|location=Sequence derived from alignment at F-serratus_M_contig105:97339..106575- (Fucus serratus male)
TGCCGGTCAGGTTTAGGCAGCAAGTACTCGTACAGAGTGCATTAGTGATA
TGGGAAGTACAAACGGGTTTTGATCATGGTGCAACCTTCATAAATGTGCC
ACGCTGTACGAGTACCAGGTAAAAGTTGGGCTGTTTCGTCTGTGTTTCGC
GACTTCAGCGTACGATGCTTCGAACGCTGTCGGCGGCGGGAGCTACGGTG
GCGTATCAATTTCGGCGACCGAAGACCTTGACGTTGAATAGGCCGGGAGA
TGGGAATGGGTTAGCGTGGACAATTCGCTCATCCCTACAGCTACGTGTAT
GCCAACCCAGACATCGCTCCCTAAGCGCTGCATCAACTTCCCCTAACCCG
CTAGAAGACAACCTCCGCGACACGATCATCATCGGTTCTGGTCCCGCGGG
ATACACGGCAGCACTCTACGCAGCCCGCGCCCAGATGAAGCCCCTAATGA
TCGCTGGAGTGCAGTGGGGTGGACAGGTGTGAAGAGCACAGAGTCAGTAT
GCACAGTACCCGTAGATCATCAGTTCATACAACACTATAGCAGAATTGAC
AGGTACATTCGAAAGCCACACTGCAATGAAGACTAAATGCACTACCGGTA
CAGTACACAGCAGTACCTAACCCGGTCACAACGTTGTAGCTTCCGTCTGT
AAACAGGGCACAGGCAGTTCCTTCTTATATACCATGATGGTGTCTCTATT
GCTGCAGCGAAACAGATTCTCGGAAGCATAAAAGGAGCCCGCTCTCCTAC
ACAAAATAGGGTTCCGATTTCTCCCGCAGGATGGCGCGGGTTTCAGTCGA
TTGGCGTAGTGTACTATTGGGAGTTTTTGATTCGGGACGCGCCCATGATC
CAGCGCACGAGGCCGTTCATGTTTCAGAGTTTACAGCAGTCGTCAACTCC
ATTGCGTCGTCGGCTGCTCAACGCGGAAGTCTTATCTATGTGAAGTCGGC
AGCAACATTTTCCTCGCCGAAACAATCTCCGTTTCACGATGCACGCATTG
AAAAATACTTTGTAGTATGTATCTATGTGTGATCATCACCTATAGCAGAG
TATGGATCAACCGGTTAAGGTTGCCACTCCTTCTCGTGGTCAGCTGAACA
GGGAAAAATTCATTTTCCCTGTCCCCGTTGGCACCTGCTGCTTGAGAATT
TTTTGTTCTTATAAAAATATCCAAAATGGATTTCAAAACATGAAACGGCT
GTGGATGGTCGGGTGCGTCGATTTTTATTTTATTTTTTAAATTGAAAAAT
CTGAGCGCAGGGAAACCTTTCACCTTTTCCGAGCATCCATACGGGCAGAG
GGAAACTGTCAGGGGAATTTGTGTCGAAAACCAATGTTGTTTGGGAACGT
CATCGCGGCAGTTACCACAAAAACTGTACATGGAATCCTGAACGCATCTA
TTTAGTCTCTGAGCATTCACCCGGTAAAGGGGGGGGGGTCCAAACGTTTA
CGGTACCTGCTTCGCTGTATTTAGAGCTAGTTACCGTACTTTGGGGATGG
GAAAAGAGAGGCGCGTAAAAAATCCATCAACTGGCGAAACCTGACAAGGC
AGCACCCGTTACTGGAAAGATACACACATGCATATACCAATAAAGCAGCG
TTCGATCCGCCACGTCCGACCTCCGTCCGCGAAAAAACTCCTATAGCCTC
GTAGCTCCAAACATACGGTTACACGGCCACGGTGTGTGCGCCCGTTCGTT
CACTCGGCCCGCGGCGGTTGCCCCTCTTAGGTTATTTTGTTCTCTGCCGC
CCCTGCTCCACTGTCGCGCGGCTACCGGCGCAGCTCCAGCTGACATCAGA
CGTCGAGAACTTCCCTGGCTACGCGGAGGCGGTTTCGGGCCCCGACTTGA
TGGAGGACCTCAAGAGACAGGCAGAGGTGAGTGCTACAGTCCACCCGCTT
CCTCCTGGCGTAGTCGATCTGCCCACCCAACGATGGTACGGGATACGCAG
CCCACATGCCCACAGGCTTGATGTATACTGTTTCTGTATGTTCAGTCGAA
TCGTGCAGAGTGCGCATTCCCGCCTCCAACCCTTTCCTCCATCTCCAAAA
CGCCCCCCTCCCCCCATCCCACCGCCCGATGAATACTCAATGTGTTTCTC
CTTGAACCTTAAGATTATGATGGGAGAAACTCTCATCCCCCCCGCCCCCA
AGTGCTCATGGTTGCTCTCGCGTGTTGCGTTGAAAATTATCTCGGGTATC
GCTCGTCGCAGCGCTTCGGAACGGAGATGCTGTACAGGGACGTCACGTCC
GTGGACGTGTCAAAGCGACCGTTCAGGGTATCAGTACGGAAGCGGGACTT
CTTGGCGAGGTGGGCGTCGTGTTTGCTGTATCGTGTGATTTCCACTCTAA
ACATTAGTGATGCATGCATGCGCACGCCTCCGCAGCCTTCATTGAGTAGA
CCGTCCCCTTTCCCCGGGAAGGCTGGCTTGTGTTTCATCCTCTCCCTCCG
CGAGTTAGGCACCATGTGACCGCGAGCAGGCCGCGTTTTCGGTGCAACCG
GCACAGACAGACAGACATGATCGATGGTACGGTTATAATATATATATACC
AGGTATAAGAATAACGGCATGGTTTTCCTGCTTTCAATGAGGTAACAATT
GAATAAATGTCCCAAACAGAAAAAAAAAACAGCTGATATCGACGCACCTT
AAAAACGCTACATACGAACTTGCAAAAATCGCGTTGTAACTGTAGTAAGC
AGAAACAAGAATGCACAGCATGACATCGATGAACTTGAAAGATGACTCCC
CCCTTCCGAAAACCCCCAGATCATAACGTAGTACTCCCAAATCACAATGC
TCGCCTGATCCCCATCATCATGGTTTTAACACAACCCACCTCCTGCAGCA
ATTTTTTTATCTTGCCTATGGAGTACGTTCGACTCGATTCGATTGCTACG
ATACTCAGGCGAGGTTTGATACATGTACTCTGTGCAAATTATTTACATTC
AGGGGTCCTACGTCCGCAGCGCAACGATCAAATGAGCTACTACTATCTTG
TATTTCGCCGGTACTTTCACCATGCTCACTTCATACCAATAGTGGGTGTG
GGAAAGAGAGGCGAATATTAATTGGTCCATGGTGACCTGTCAAGGCAGCA
TTCGTTCGGAACTACCTTGAGGTTTACTGGCCCTGTGCTGACGGACTCTC
GGCAGTGAACGCCATCGGTACGCAATTGCGTGACCCGATAAAGTTGGGAC
TTGCCCGATGGCGTATGGCGACTTAATATAAATATATGGACGTCGTCGCG
GAACTCGGGAGGAATCCCGTAAGTAAACACCAGGTTCAGCCTGAGTATGG
AGATGAGCAGGCTGACGCGGGACGGGACTGCCGAAACCGTCTCGCGAGAC
CAAATTCTCAGGCACGAACGCGGACAGGGGAATATCCTTTTCCCTGTTCA
GCTGACCACGAGCAGGATTGGCAAACCTTACCCGGTTGATCCATACTCTT
GCTATATGTGTGTGATCATACATCGTCGGCGGATTGCGCCATGACCAAGT
ACAGTAATGTGGAGGGAACAAGAGGAATCTTGAACTCTATTCTCAAGCTT
TCAGATACACGGGTGTTTCCGGCGCGGTGGCCATAGAAAGATAAGGCGTT
GGCGAAGCCAGCATAGAGAGTTATCTGATCAGTAACCCTGCGATGTGAAC
CACTTTTAAGACATGTAGAGCCTACTACTATTACCGTATCTGGACAAAGG
CGCGCTCCCCGGTTTCAACCGCTTACATACTTGCTGCCCCTACAAGATTA
TCAGCCCTTGAGGTTGCCTCTTGAGATCTGTCTGACCGTGCATGTCCCTT
GGAGGTCTCCGATACCTTCCACCGACGTTTTCGAAAAGTCGCTTTGTTGA
TTAGGCGGTCGCTTCCTTCGTTGCCTTTTTTTTTTTTTTTTTTTTTTGCT
TTTGAAAAAACACTTGAACTCCACCGGCACTATTGTTAAGACAGATCCAC
CCCCTCCATATCACACCAACTCCTTTGCGAGAAAGGAGGGATTTATTTTG
AAGGGCGATCGTTGTCGAAACTATTATTTTGCTTCCCAGCGGAAGACATC
TTGCAGCCGCACCATGTGTACGCGCGGTGCGCTTTGAGTCACAGCGCGCG
CGCCTTGCGTTTCCCCCGATGGCTGCGGTTGTCTCGGCCTTTCCGCTAGG
ATCGGACACCTATACCGGATTCAGCCTGAGTATGGAGATGAGCAGGCTGG
CGCGGGACGGGACTGCCGAAACCGTCTTGCCAGACCAAATTCTCAGGCAG
GAATGCGCACAGGGGAATATTATTTTCCCTGTTCAGCTGACCACGAGCAG
GATTGGCAACCTTACCCGGTTGATCCATACTCTTGCTATCTATGTGTGGC
CATGTAGTAGGTCTTCTCCGACGCGGGATGAACCCCCTCGTTTTGCCGCA
GCCTTGACCCTCTCGTTCGAGGATTTCTGGTAGTGCGGTAGGAATCAAAG
GCGTGATCCGACGGCGGGTTTTTACTTCGTGGGCTGCCTTCTCGGAGCTC
GCTCGCAGAGGGAGGTAGCTAAGTACGTTCGCCCCCGGCACGTCTGCGGT
ACCATCGGCGGCGTCGTATACAACATGCGATCCACACGCACCTTGATCGG
TGAGGGCCGCGGCTAGAGCGCACCTCCGCTTTCTCCAGCCACAAGTCTGC
TTACTTGCTGGAATTGTTGCCGAGCCGCAGGCAGCTCACGCGCACCCTTG
CCGCCGAACGGATAATCCAGCGTGTGGAGTAGGCAAGACCCTGGACCGCC
GAACGGGCCACTGCGCTAAGCTCTCCTCCTCGCGACAGGACTACAGAAAC
CCTCCCTGGTTGTTGATGCTTCTCGACAGCCTGGAAAACCACCCCCCCGA
TACCTGTGCACTCTCGAACCTGTGAGGGAAGAGCCTCCGCGCTCACCCTG
GAGCAACCTGTCCCGCGCTCAAAAAAAAGCAAGGGGCAGCAGGTGTCAGA
AACAGGCAGGCAAACAGGTACCGGTAGCTTTTTTTCGTGTCGATCTGGCA
TTTTTTTTGCCCTGGGTCTTGTGGGCGATGGTCTTTGTTGTTGTTTGTTG
TTTCCCATGTTAATCGTATGCGTACGGATGGCGTCCCAACATCTCATTCA
GTTGGAAGGCTGACGCGGGGCACAACAGTAGCTGCTCTTAGGCAACGGGA
GGGGAGCGTTCGGAGACAGCAAAATATCTCCCGACGCAGGAGGTTTGATG
CTGTGAACAAACAAAAACAAAAAAGACACAACCTTCGAAAGGGGAAGCCC
ACCAACGAGTAAGGCTCTAGACGTCCGTTAATAGACTATGGCCGCGCCTT
GCAGACCAAAGACATGATGCTCGAAGGCAGCAGCGAAGTCTGCTGCTAGC
TGTTACAGCTGCCTGCAGCGACTCCAGCACCCGCCCAGATTAGAGCTAGT
GGTGTGATCCATCAATGCTGACGGCGGCTTGCTCCTGTCCTCTTTTTATG
CAAACTACACAAATCCATATCGTCGTTTAGACGACACCCCCATTGTGATA
CGCGACGTTTCCGGACTCGTCCTGGAAAGCGGGGCCTTCACGTATAGGGA
TGCGGCTTGAAGTCGCGGCATGCTGGAGCCGCTCGCGTCTCGGGGTTTCC
ATTCGTTTATGTGTTTCTCCCCCCCCCCTTCCACGTTATTGCTATGAATA
GTATGATGTATTGAGAGCTTAGATTGAGAAAATGGATAGTTTTGTATCGA
AGGAGGCACCACAGGACGGGGGAGAAGTAGCAAGTAACCCACGTGGGGGG
GCGGGGTGCGTCTCACTACGGTGCGCTATGAAAATGACAATATTATCGTA
GAACTGTAAATTATAAACGCTAAGATTCCGAAAGATCTGTGCACCTCTCC
ATTTGACAACCACTTTTATCTATCTAGAGCGATAGCTCTAGCCGGTTCTA
GCTACAGTAGAGGTATTTGTCCGTTGTTAGCCGTGTTTCAATTTTGGACG
CAGTCAGCAATGCTTGGGTTACCATCTACACTCGCCAGTGTATGTTGTAC
CTGACGGGGGCCACCGCTGGTTATATATGATATATTTATATGGCCGTGCG
GCGAACCAAGGCGACGGTAGCCTCTTTTTTTTTTACAGGGGTTTTCATCA
ACATTACTATAGTAGCCGGAGTGAACTCTTTTAGGCTATAATAGTTCAGC
GCTGACTACTGTTGATAGTCTAAATAATATGGCTTGGTTCTGGTTACCAC
TCATAAAAGCTGTTATGGTCATGGGTCCGAAGGGCCTGTGGGACTTTTTC
ACTCCGAGGAGGGCAATTCCCCTTTCCAGCGTATTCTGCTGAAAAAAAAA
ATGCGTCTTCCTCCTCCTTGCAACCTGTCACTCTCGCTTAATACCAGTTT
ACTAGCCTACCATGAGATCCTACCTAGGCCCTAGAGTTATTCCGTAACCC
ATGCTTTACGCCCAAGAAAGAGTATTCAGGGTCTCGGGAAGTATATCCCG
TCTCCCACCCTCTCTGTGCAGGAGTATTTAAAGCCCCTGGGAATGGAGGG
ACATCTCCTGAATTACAGCCTGGTGCTCGAACCCACGTTAAACTTTTATA
GAAGCCGGAAGCCGGAACCAAACCGTTGGACTATTTGGTAATTCCGGCTG
CGATATACACACAGTACCGCAGTTACAGTTCGACGAAATTCTGACAGCCG
CGGTTCCGATTCGGATTCGGATCACGGATGCTAAGAACCACGGTTCCAAA
TCGGGGGTACTACGAGACTCCTTCGATACGTTCCACGGAAATAGTTTGCG
GCTGCGGCTCACGATTCCTAGATCCCGCTCTTCCACAACTACAACACCAA
CCTCAAGCGTTCATTCCACACGGTCATCGCGAGTTGTTGCGTCCCCTCGA
TCCTTCTGGGAATCATCCCCAAGATTGCTTGTACCCAGAGAGCACGAATG
GTGCCCGGAAGTGGGAACGCTTTAAGAGGAACCGGCGATGAACGCACGAG
TCAACTCCACGCCAAAGAACCGCAATGCCAGCGATTTTACGAGGTACGGA
GAAATCGCGAACTTCACGGGGTCCAAAGTGGCGCGGATCAAGGATCTGCC
TGAAAATCAAAGTACAATCCGATATATACTTATATACACTATAGATACTG
TACGGATCTTCACCATGGTGCGCCATCAGTTTCACGGTACGGTGCGAATA
CGATTCCGCGCAACCAGAAAAGCACATAGCCTCAGCGGTGCACGAGTTAA
CAATGGACATGCGTCCGCCGTGGGTTTTAGATCCGTGAAGGTTTTTTTTT
TTTTATGGGGTGGGGGGGCTGTTGTTGTCCCCTCGTGGGCGGGTGCGGCA
GATCCCTCATCATTGCTACGGGGGCGGAAGCGATATGGCTCGGGGCGGAG
GGCGAAGAAGAAGTAAAGGGCAGAGGCGTCAGTACCTGCGCCACCTGTGA
CGGGGCTTTCTACGAAGGGAAAGAGGCGAGTTCGCGAGACAATGAAGACC
ATTGTCTAACCCCTTACCCCCTATCCGGGGGCGCGCGGTGTGGGGGGGAG
GGGGGGAGCCGGCGTGATACGTACTCTCGACAGGTGAAACGTGGGGAGGT
CTGCAGCCCGACAAGTTTGCCGCGGGGTATGTTTCTGAGGCCGTTTGCGG
CGGGAACGTTTTTCTCCGATACTTACCCATCCGCTTCCCCACGGGCCCTA
CAAATGTCGCGTGCCGCGCAGGTAATAGTAGTGGGCGGGGGCGACAGCGC
GATGGAGGAAGCTCTTTTCTTGACCAAGTTCGCTTCCAAGGTGTAAGAGG
AACCCATCTGCCGTGTCGACCGGTGTTGGTTCAAGCGGCAAAGGGGGGCG
TCCTCGATATCTTCTACGACCCTCCCTCCCTCCCCTCGAAGCCCTGTTTT
CTTTTCCGACGCCACTTAAAATTGAAACATCTCGACCGCGTAGCATTGGG
TTGTTGGTTCTGGTTTTTGTTGGGACTGTGTTAAATTGTTGCGTACATGT
TGGATACAGACTAGTTTTCTGACGGATGTACGGCTGAGTGTACGGCTGGA
ACATCTTCTCCGCGAGAGAGAGGTGTGCCCCCAGTCACTTCCCGTGTATT
GAGTCATTCGTGCGGGTCCCCGGCGCGGACATCCACGTGTTACTCCGACG
ACCGAACACGCAGAGGGGAGCGGATAGTAAAATTGTGAAATGTGATGCTG
GTTCAAGCTCCCGCGAACTCGTAAACATGCGCTTCGCATGTGATGCCCCC
TCTCAGTGACGGCTCTAATCTGATATAATTTTCATTTTTTTGTCAGGTAA
CTCTCATCCACCGACGAGCGGGGTTCAGGGCTAGCAAGATCATGCTGGAG
CGGGTGCAGGACCATCCCAAGATTGAGATTCGATTGCACCGGGTAGTGAA
GAGGCGAGCTCACCGAAGGCGGGGGGGGGGGAGGGGGGTTATTGCCGTGC
AGGAAGAGAGAGCTGCTGCAGCCCGAGGTCTGGCTTACGTATCAACCCAG
CTGCCGTGCGCTGTTAGCTCCAGGAGCACACTTCGATAACTTTCTCGGCA
ACGGTAGCGTGAACGCTTGGCCTAGCGCGCTATCAATCAATCGCAGCATC
CACTCGCTGCCAGAGGATCTCTTATTACCTTGATGATAGAGCACGATAGA
GCGATATGACTGTCTGCACTAGTAATTGTGCTACGATAGATGTGTTGATA
TATTTACGCGCTGCTATACAATGCATTGTTTTGTTTTTGTACTCTAGTAC
CCTGATATGGTTTAGTATAACTGCGTTTCCGTCTTGAGGTTTACCAGACG
CTAACCTCCTCCCCTCCCTCTCCCCGCTCCCTCTCCGGTTTCTACCTCTT
GAATCCTTACCGCTTGCTGTCACGGTGGTGCCTTGAAATCGCGCGTAAGG
TGGGTCATCGAGGGAGGCGTTCTCGCCGGAGCTGCGTTGGAAAATCCCCG
CGGGGACGAAGGGGGCGGGCCGAAGGCAGAGGACTTTCTGCCGTGCAGCG
GAGCGTTTCTTGCAGTCGGTCACAAGCCGATGACGAGCTTCTTGCGTTCT
TCGCACGCCGCCGGCGCCTTGAAGGAGGAAGGGTCCCCCGTAGAGCAGAG
GGCGATGATAGAGCTAGATGAGGACGGTTTTATTGTACACAAGGAGCACA
CCATGACCAGCGTGGAGGGCGTCTTTGCGTGCGGGGACGTGGTGGATCGT
CGATATCGTCAGGCGATAAGCGCAGCAGGGATGGGTTGCCAGGCTGCGAT
AGATTGTGAGAGATGGCTCGCGGAGGAGGGTCAGTGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig105:97339..106575-

>mRNA_F-serratus_M_contig105.500.1 ID=mRNA_F-serratus_M_contig105.500.1|Name=mRNA_F-serratus_M_contig105.500.1|organism=Fucus serratus male|type=CDS|length=2418bp|location=Sequence derived from alignment at F-serratus_M_contig105:97339..106575- (Fucus serratus male)
ATGCTTCGAACGCTGTCGGCGGCGGGAGCTACGGTGGCGTATCAATTTCG
GCGACCGAAGACCTTGACGTTGAATAGGCCGGGAGATGGGAATGGGTTAG
CGTGGACAATTCGCTCATCCCTACAGCTACGTGTATGCCAACCCAGACAT
CGCTCCCTAAGCGCTGCATCAACTTCCCCTAACCCGCTAGAAGACAACCT
CCGCGACACGATCATCATCGGTTCTGGTCCCGCGGGATACACGGCAGCAC
TCTACGCAGCCCGCGCCCAGATGAAGCCCCTAATGATCGCTGGAGTGCAG
TGGGGTGGACAGATGCTTCGAACGCTGTCGGCGGCGGGAGCTACGGTGGC
GTATCAATTTCGGCGACCGAAGACCTTGACGTTGAATAGGCCGGGAGATG
GGAATGGGTTAGCGTGGACAATTCGCTCATCCCTACAGCTACGTGTATGC
CAACCCAGACATCGCTCCCTAAGCGCTGCATCAACTTCCCCTAACCCGCT
AGAAGACAACCTCCGCGACACGATCATCATCGGTTCTGGTCCCGCGGGAT
ACACGGCAGCACTCTACGCAGCCCGCGCCCAGATGAAGCCCCTAATGATC
GCTGGAGTGCAGTGGGGTGGACAGCTCCAGCTGACATCAGACGTCGAGAA
CTTCCCTGGCTACGCGGAGGCGGTTTCGGGCCCCGACTTGATGGAGGACC
TCAAGAGACAGGCAGAGCTCCAGCTGACATCAGACGTCGAGAACTTCCCT
GGCTACGCGGAGGCGGTTTCGGGCCCCGACTTGATGGAGGACCTCAAGAG
ACAGGCAGAGCGCTTCGGAACGGAGATGCTGTACAGGGACGTCACGTCCG
TGGACGTGTCAAAGCGACCGTTCAGGGTATCAGTACGGAAGCGGGACTTC
TTGGCGAGCGCTTCGGAACGGAGATGCTGTACAGGGACGTCACGTCCGTG
GACGTGTCAAAGCGACCGTTCAGGGTATCAGTACGGAAGCGGGACTTCTT
GGCGAGATCCCTCATCATTGCTACGGGGGCGGAAGCGATATGGCTCGGGG
CGGAGGGCGAAGAAGAAGTAAAGGGCAGAGGCGTCAGTACCTGCGCCACC
TGTGACGGGGCTTTCTACGAAGGGAAAGAGGCGAATCCCTCATCATTGCT
ACGGGGGCGGAAGCGATATGGCTCGGGGCGGAGGGCGAAGAAGAAGTAAA
GGGCAGAGGCGTCAGTACCTGCGCCACCTGTGACGGGGCTTTCTACGAAG
GGAAAGAGGCGATAGTGGGCGGGGGCGACAGCGCGATGGAGGAAGCTCTT
TTCTTGACCAAGTTCGCTTCCAAGTAGTGGGCGGGGGCGACAGCGCGATG
GAGGAAGCTCTTTTCTTGACCAAGTTCGCTTCCAAGGTAACTCTCATCCA
CCGACGAGCGGGGTTCAGGGCTAGCAAGATCATGCTGGAGCGGGTGCAGG
ACCATCCCAAGATTGAGATTCGATTGCACCGGGTAGTGAAGAGGCGAGCT
CACCGAAGGCGGGGGGGGGGGAGGGGGGTAACTCTCATCCACCGACGAGC
GGGGTTCAGGGCTAGCAAGATCATGCTGGAGCGGGTGCAGGACCATCCCA
AGATTGAGATTCGATTGCACCGGGTAGTGAAGAGGCGAGCTCACCGAAGG
CGGGGGGGGGGGAGGGGGGGAGGCGTTCTCGCCGGAGCTGCGTTGGAAAA
TCCCCGCGGGGACGAAGGGGGCGGGCCGAAGGCAGAGGACTTTCTGCCGT
GCAGCGGAGCGTTTCTTGCAGTCGGTCACAAGCCGATGACGAGCTTCTTG
CGTTCTTCGCACGCCGCCGGCGCCTTGAAGGAGGAAGGGTCCCCCGTAGA
GCAGAGGGCGATGATAGAGCTAGATGAGGACGGTTTTATTGTACACAAGG
AGCACACCATGACCAGCGTGGAGGGCGTCTTTGCGTGCGGGGACGTGGTG
GATCGTCGATATCGTCAGGCGATAAGCGCAGCAGGGATGGGTTGCCAGGC
TGCGATAGATTGTGAGAGATGGCTCGCGGAGGAGGGTCAGTGAGGAGGCG
TTCTCGCCGGAGCTGCGTTGGAAAATCCCCGCGGGGACGAAGGGGGCGGG
CCGAAGGCAGAGGACTTTCTGCCGTGCAGCGGAGCGTTTCTTGCAGTCGG
TCACAAGCCGATGACGAGCTTCTTGCGTTCTTCGCACGCCGCCGGCGCCT
TGAAGGAGGAAGGGTCCCCCGTAGAGCAGAGGGCGATGATAGAGCTAGAT
GAGGACGGTTTTATTGTACACAAGGAGCACACCATGACCAGCGTGGAGGG
CGTCTTTGCGTGCGGGGACGTGGTGGATCGTCGATATCGTCAGGCGATAA
GCGCAGCAGGGATGGGTTGCCAGGCTGCGATAGATTGTGAGAGATGGCTC
GCGGAGGAGGGTCAGTGA
back to top