mRNA_F-serratus_M_contig105.497.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig105.497.1
Unique NamemRNA_F-serratus_M_contig105.497.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig105.497.1 vs. uniprot
Match: D8LKE4_ECTSI (Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKE4_ECTSI)

HSP 1 Score: 409 bits (1051), Expect = 6.780e-130
Identity = 235/402 (58.46%), Postives = 277/402 (68.91%), Query Frame = 1 
Query:  244 GSLAKVNQYVVIRDLGQGSSAEVRLCR-----------RMRND-GESKTSNNLEDVAAAG----------------------EGESGQAERATQADMAQSF---VEGD--DGSGLYAMKIYNRAKMMKRGARFARGRERRPDGVSLEGAQRPEKFVKVQEEIAIMKKLLHPNIVQLIEVMDDPLASSLIIVMGYVERGSIMHCVEPERGRY-ASPIT--GSCFDAPTAARYFADILNGLEFLHLQLIAHRDLKPENVLLGNDDRAKIADFGASQYFADDAQRTPKSARSLARSSSRAQIFEAEGTWGFWAPEMCGAGGEGAAFNAYAADAWAAGVTFWCFLYGTVPFFSSNPVELFQAITTDPAPIPDEADGTLRGFLEHLLDKSPEMRLTVTEALEHPWIR 1323
            GS+AKVN+YVV+RDLG+GSSAEV+LCR           R  ND G S T  ++ D    G                       G++ + ER  + +  Q      E D  DG  LYA+KI++RA++M+RGARFAR R R PDG  L     PE ++KVQ EIAIMKKL+HPN+VQL+EV+D P   SL +VM YVERG++M CVE E GRY  SP    G C DA TAARYFAD+L GLE+LHLQLIAHRDLKPENVL+GNDDRAKIADFG SQYF DD  RT KSARSLARS+SRAQ+   EGTW FW+PEMCG  GEGAAFNAYA+DAWAAGVT WC LYGTVPFFS NP++LF +I  DPAP+PD AD TL+  L  LL K P  RLTV EA +H W++
Sbjct:   57 GSVAKVNEYVVVRDLGRGSSAEVKLCRLLMPPDRVIDNRHTNDNGLSATRESIADTVGGGXXXXXXXXXXXXXXXXXXXXXARGDTYK-ERVERQEGGQDHGRDQERDELDGGDLYAVKIFDRAELMRRGARFARPRARGPDGALLPAKATPENYIKVQREIAIMKKLVHPNVVQLVEVIDAPRDRSLYMVMEYVERGAVMCCVEQEMGRYECSPSVSEGGCLDARTAARYFADVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFHDDEPRTLKSARSLARSTSRAQMSSTEGTWCFWSPEMCGERGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPDGADMTLKDLLNRLLTKDPGKRLTVPEARDHCWVQ 457
[Close]
BLAST of mRNA_F-serratus_M_contig105.497.1 vs. uniprot
Match: A0A6H5JDN4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN4_9PHAE)

HSP 1 Score: 395 bits (1016), Expect = 1.780e-123
Identity = 227/423 (53.66%), Postives = 274/423 (64.78%), Query Frame = 1 
Query:  244 GSLAKVNQYVVIRDLGQGSSAEVRLCRRM---------RNDGESKTSNNLEDVA--------------AAGEGESGQAERATQADMAQSFVEGD---------------DGSGLY----------------------AMKIYNRAKMMKRGARFARGRERRPDGVSLEGAQRPEKFVKVQEEIAIMKKLLHPNIVQLIEVMDDPLASSLIIVMGYVERGSIMHCVEPERGRY-ASPIT--GSCFDAPTAARYFADILNGLEFLHLQLIAHRDLKPENVLLGNDDRAKIADFGASQYFADDAQRTPKSARSLARSSSRAQIFEAEGTWGFWAPEMCGAGGEGAAFNAYAADAWAAGVTFWCFLYGTVPFFSSNPVELFQAITTDPAPIPDEADGTLRGFLEHLLDKSPEMRLTVTEALEHPWIR 1323
            GS+ KVN+YVV+RDLG+GSSAEV+LCR +         ++  +   S N E +               ++G G  G+      A   +  VEG                DG  LY                      A+KI++RA++M+RGARFAR R R PDG  L      + ++KVQ EIAIMKKL+HPN+VQL+EV+D P   SL +VM YVERG++M+CVE   GRY  SP    GSC DA TAARYF+D+L GLE+LHLQLIAHRDLKPENVL+GNDDRAKIADFG SQYF DD  RTPKSARSLARS+SRAQ+   EGTW FW+PEMCG  GEGAAFNAYA+DAWAAGVT WC LYGTVPFFS NP++LF +I  DPAP+PD AD  L+  L  LL K P  RLTV EA +H W++
Sbjct:  104 GSVTKVNEYVVVRDLGRGSSAEVKLCRLLMPPDRVFDNQHTSDIGLSANRESIVDTVGGGXXXESRSGSSGFGGEGRRRHRASAGTYKERVEGQEGGQDHGRDQERDGLDGGDLYVCSGGEACVGVENVDVRDTPLVAVKIFDRAELMRRGARFARPRARGPDGALLPAKATSDNYIKVQREIAIMKKLVHPNVVQLVEVIDAPRDRSLYMVMEYVERGAVMYCVEQGMGRYECSPSVNEGSCLDARTAARYFSDVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFNDDEPRTPKSARSLARSTSRAQMSSTEGTWCFWSPEMCGEWGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPDGADTPLKDLLNRLLTKDPGKRLTVPEARDHRWLQ 526
[Close]
BLAST of mRNA_F-serratus_M_contig105.497.1 vs. uniprot
Match: A0A4D9D4E9_9STRA (Protein kinase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4E9_9STRA)

HSP 1 Score: 210 bits (535), Expect = 3.970e-55
Identity = 156/424 (36.79%), Postives = 220/424 (51.89%), Query Frame = 1 
Query:  244 GSLAKVNQYVVIRDLGQGSSAEVRLCRRMRNDGESKTSNNLEDVAAAGEGE---------SGQAER-----------ATQADMAQSFV--------EGD-DGSGLYAMKIYNRAKMMKRGARFARGRERRPDGVSLEGAQRPEKFVKVQEEIAIMKKLLHPNIVQLIEVMDDPLASSLIIVMGYVERGSIMHCVEPERGRYASPITGS---CFDAPTAARYFADILNGLEFLHLQLIAHRDLKPENVLLGNDDRAKIADFGASQYFADDAQR---------------------TPKSARS-------LARSSSRAQIFEAEGTWGFWAPEMCGAGGEGAAFNAYAADAWAAGVTFWCFLYGTVPFFSSNPVELFQAITTDPAPIPDE---ADGTLRGFLEHLLDKSPEMRLTVTEALEHPWIRM 1326
            G L  VNQY +I++LG+G+ AEV+LC+R        T  ++    A G GE         S +A R           +  ++ ++S+         E D D   LYA+K+++++ +++R   F R RE R   +SL          KVQ EIAIMKKL+HP++V L EV+DD    +L +V+ YV  G IM     ER RY    +       +   AAR  +D+L GL +LH+  IAHRDLKPENVL+G   R KIADFG + YF ++A R                     T  S  S       L RSSSR  + +++GTW FWAPEMC    +GA F+ Y+ D WAAGV  W F++G +PF   +P  LF+AI       P E       ++  L+  L K P  R+TV +AL+HPW+++
Sbjct:   16 GGLMNVNQYAIIKELGRGAFAEVKLCKRQYPSIPDPTFQSM----ATGSGEYHSLVSGTGSPKARREEASPSPPRGVSPTSEESRSYTPSPIPMDEEADKDAKDLYAIKVFSKSLLLRR-KNFGRNREGR---MSL-----TTDLDKVQREIAIMKKLIHPHLVSLYEVIDDASQDALYLVLEYVPGGPIMDFDAEER-RYVCTRSSDGMGVLNEVHAARVLSDMLAGLVYLHVHHIAHRDLKPENVLVGRGGRCKIADFGVAHYFEEEAARILALDDQAGAGASREGLATGTTSPSVSSHEHQLHYLYRSSSRGLLHKSDGTWSFWAPEMCE---QGATFSGYSCDVWAAGVCLWAFMFGKLPFQEDSPEVLFEAIRDKELDFPLEERQVSSEVQDLLQSFLQKLPRERITVGQALDHPWVQL 422
[Close]
BLAST of mRNA_F-serratus_M_contig105.497.1 vs. uniprot
Match: A0A7S2RI55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RI55_9STRA)

HSP 1 Score: 201 bits (511), Expect = 6.030e-54
Identity = 137/372 (36.83%), Postives = 190/372 (51.08%), Query Frame = 1 
Query:  244 GSLAKVNQYVVIRDLGQGSSAEVRLCRRMRNDGESKTSNNLEDVAAAGEGESGQAERATQADMAQSFVEGDDGSGLYAMKIYNRAKMMKRGARFARGRERRPDGVSLEGAQRPEKFVKVQEEIAIMKKLLHPNIVQLIEVMDDPLASSLIIVMGYVERGSIMHCVEPERGRYASPIT-----------GSCFDAPTAARYFADILNGLEFLHLQLIAHRDLKPENVLLGNDDRAKIADFGASQYFADDAQRTPKSARSLARSSSRAQIFEAEGTWGFWAPEMCGAGGEGAAFNAYAADAWAAGVTFWCFLYGTVPFFSSNPVELFQAITTDPAPIPDEADGTLRGFLEHLLDKSPEMRLTVTEALEHPWIRM 1326
            G +  VN+Y +I  +G GS+A   LC R                   GE                           +A+K++ ++ M+ R    +RG ER    VS    Q       V  EIA+MKKL H N+V+L EV+DD     + +V+ +VE G+I+    PE  R+  P++            + +    AA Y  DIL GL+FLH   IAHRDLKPENVL+  D  AKIADFG + YF D+  +  +   +LARS S+ Q+ + EGT+ FWAPEMC    +G AFN YAAD WA GV  +C ++G +PF  S+  +LF AI T+    P         FL  LL+K P+ RL++ EA+ HPW+ M
Sbjct:   58 GEVTDVNEYHIIELIGTGSTASAYLCERR-----------------GGE------------------------HSRFALKVFEKS-MLSRRRTMSRG-ERGNMIVSSALDQ-------VSREIAVMKKLEHINLVRLFEVIDDENEDQMFMVLEFVEGGTILDW-NPEEERFNLPVSQLKGPKRSGAASAMYAEEEAAAYTVDILRGLKFLHQNHIAHRDLKPENVLITGDGHAKIADFGVAHYFQDEEDKPLRP--NLARSHSQGQLTKTEGTYYFWAPEMC----DGLAFNGYAADLWALGVCVFCMVFGALPFSGSSATDLFDAIQTENLTFPSPVSEDCADFLSGLLNKDPDQRLSLEEAVAHPWLEM 372
[Close]
BLAST of mRNA_F-serratus_M_contig105.497.1 vs. uniprot
Match: A0A7S4E3P3_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3P3_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.890e-53
Identity = 129/361 (35.73%), Postives = 194/361 (53.74%), Query Frame = 1 
Query:  244 GSLAKVNQYVVIRDLGQGSSAEVRLCRRMRNDGESKTSNNLEDVAAAGEGESGQAERATQADMAQSFVEGDDGSGLYAMKIYNRAKMMKRGARFARGRERRPDGVSLEGAQRPEKFVKVQEEIAIMKKLLHPNIVQLIEVMDDPLASSLIIVMGYVERGSIMHCVEPERGRYASPITGSCFDAPTAARYFADILNGLEFLHLQLIAHRDLKPENVLLGNDDRAKIADFGASQYFADD-AQRTPKSARSLARSSSRAQIFEAEGTWGFWAPEMCGAGGEGAAFNAYAADAWAAGVTFWCFLYGTVPFFSSNPVELFQAITTDPAPIPDEADGTLRGFLEHLLDKSPEMRLTVTEALEHPWIR 1323
            G++ ++ QY ++  LGQGS AEV L +                                 +D+ +++          A K+++++ +          R +R    ++EG +   +  KV +EI IMKKL+HPN+V+L+EV+DD   + L ++M +VE G +M   + E  ++ S +TG   +   A +Y  DI +GL +LHL  IAHRDLKP+NVLLG   R KIADFG + YF +D A     S RSL RS SRAQI + +GT+ FWAPEM     +   FNAY+ D WAAGV ++ F+ G +PF++ +PVE+F  I      IP+      R  +  LL  + + RLTV +    PW++
Sbjct:   17 GTVRRIKQYTLLTRLGQGSFAEVFLAK---------------------------------SDVDETYC---------AAKVFDKSLL----------RRKRTISRTVEGFKIHSELDKVDKEIGIMKKLVHPNLVRLLEVIDDKKDNQLFLLMEFVELGPVMK-YDRETNKFTSTVTGGLCEERLAGQYLLDIASGLGYLHLHHIAHRDLKPDNVLLGKLGRCKIADFGVAHYFEEDHANDKTLSVRSLERSHSRAQIRDTQGTYCFWAPEMIQGDKK---FNAYSCDMWAAGVCYFIFVTGKLPFYAESPVEMFDFIAQASPVIPNTLSNHSRRVIFGLLATNIDTRLTVQDLQSDPWLK 321
[Close]
BLAST of mRNA_F-serratus_M_contig105.497.1 vs. uniprot
Match: A0A7S3Y6M6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6M6_HETAK)

HSP 1 Score: 195 bits (495), Expect = 2.240e-52
Identity = 109/243 (44.86%), Postives = 143/243 (58.85%), Query Frame = 1 
Query:  595 KVQEEIAIMKKLLHPNIVQLIEVMDDPLASSLIIVMGYVERGSIMHCVEPERGRYASPITGSCFDAPTAARYFADILNGLEFLHLQLIAHRDLKPENVLLGNDDRAKIADFGASQYFADDAQRTPKSARSLARSSSRAQIFEAEGTWGFWAPEMCGAGGEGAAFNAYAADAWAAGVTFWCFLYGTVPFFSSNPVELFQAITTDPAPIPDEADGT--LRGFLEHLLDKSPEMRLTVTEALEHPW 1317
            KVQ+EIAIMKKL HPN+VQ+ EV+DDP    L +V+ YV  G +M   E     Y S  TG  +    AA +  DI  G+++LH   I HRDLKPEN+LL + +R KIADFG S YF  D Q++P+  R L RS SR Q+   EGTW FWAPEMC  G     ++ YAAD W+ GV  W  L+G +PF +  P ELF AI   P  +P +   +  ++  L+ LL K P  R+ + +     W
Sbjct:    9 KVQQEIAIMKKLCHPNLVQMFEVIDDPDGDQLFMVLEYVPNGIVMEWDETADAFY-SRFTGGVYTEEQAAGHMMDICAGMQYLHQNHICHRDLKPENILLSSQNRCKIADFGVSHYFEQDEQKSPR--RDLYRSESRGQLKNTEGTWSFWAPEMCQPGHGN--YSGYAADMWSMGVVLWVMLFGKLPFSAETPPELFAAIAAAPHEVPADKHPSEEVKEVLDGLLKKDPRERIGLGDLSNSRW 246
[Close]
BLAST of mRNA_F-serratus_M_contig105.497.1 vs. uniprot
Match: F0YAL4_AURAN (Eukaryotic translation initiation factor 3 subunit G n=3 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAL4_AURAN)

HSP 1 Score: 194 bits (492), Expect = 2.050e-49
Identity = 139/364 (38.19%), Postives = 189/364 (51.92%), Query Frame = 1 
Query:  244 GSLAKVNQYVVIRDLGQGSSAEVRLCRRMRNDGESKTSNNLEDVAAAGEGESGQAERATQADMAQSFVEGDDGSGLYAMKIYNRAKMMKRGARFARGRERRPDGVSLEGAQRPEKFVKVQEEIAIMKKLLHPNIVQLIEVMDDPLASSLIIVMGYVERGSIMHCVEPERGRYASPITGSCFDAPTAARYFADILNGLEFLHLQLIAHRDLKPENVLLGNDDRAKIADFGASQYFADDAQRTP-KSARSLARSSSRAQIFEAEGTWGFWAPEMCGAGGEGAAFNAYAADAWAAGVTFWCFLYGTVPFFSSNPVELFQAITTD----PAPIPDEADGTLRGFLEHLLDKSPEMRLTVTEALEHPWI 1320
            GS+ ++NQY + + LG+GS AEV L +                                 AD+A             A K++N++ + ++     R   R  DGV +       +  KVQ EIAIMKKL H  +V+L EV+DD    +L + M +VE+G +M   +P    +A+  TG     P AA Y  D+ +GL +LHL  IAHRDLKP+NVLLG+D   KIADFG +  F +     P KS  SL RS S AQ  E +GT+ FW+PEM    GEG  FNAY+ D WAAGV F+ FL G +PF++   ++LF AI       PA +PD A   L G +E  +DK    RLTV +     W+
Sbjct:   15 GSVRQINQYTLEKKLGRGSFAEVYLAK--------------------------------SADLAAPV----------ACKVFNKSLLRRK-----RTMARTADGVKV-----TTELDKVQTEIAIMKKLEHNRLVRLYEVVDDDECDALYMFMEHVEKGPVM-VHDPSTNTFAAAATGGPCGGPLAAAYLLDVASGLGYLHLHGIAHRDLKPDNVLLGHDGFCKIADFGVAHVFDEQPAGEPQKSLWSLERSHSVAQTGETQGTYSFWSPEMVE--GEGGKFNAYSCDCWAAGVCFYIFLTGRLPFYAEEVMDLFGAIEAAAPDIPADLPDGAKRVLAGLMEKDVDK----RLTVPQLEADEWL 319
[Close]
BLAST of mRNA_F-serratus_M_contig105.497.1 vs. uniprot
Match: A0A7S2CYB8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CYB8_9STRA)

HSP 1 Score: 178 bits (451), Expect = 3.040e-46
Identity = 104/246 (42.28%), Postives = 143/246 (58.13%), Query Frame = 1 
Query:  598 VQEEIAIMKKLLHPNIVQLIEVMDDPLASSLIIVMGYVERGSIMHCVEPERGRYASPITGSCFDAPTAARYFADILNGLEFLHLQLIAHRDLKPENVLLGNDDRAKIADFGASQYFADDAQRTPKSARSLARSSSRAQIFEAEGTWGFWAPEMCGAGGEGAAFNAYAADAWAAGVTFWCFLYGTVPFFSSNPVELFQAITTDPAPIPDEADGTLRGFLEHLLDKSPEMRLTVTEALEHPW-IRMRL 1332
            V  E+AIMKKL HPN+V L EV+DD   S + +V+ +VE G +M   E   G++ S   G  F    AA+   D+++GL +LH+  IAHRDLKPEN+L+G+D   KIADFG S +F  + +     A          Q+ + EGT+ F+APEMC  G     FNAYA D WA G+  W  ++GT+PF   NPVELF  I T     P +    L+  +   LDK P  R+T+ +A EH W ++M+L
Sbjct:    3 VAGEVAIMKKLRHPNLVALHEVIDDHDESMMFMVLDFVEGGELMSWDE-SAGKFTSN-EGGLFTEARAAKATQDVISGLAYLHMNHIAHRDLKPENLLVGSDGEIKIADFGVSHFF--EQEDKTDDATMEKEIEKVGQLTKTEGTYYFFAPEMCTKG----PFNAYACDVWALGICVWAMVFGTLPFKGGNPVELFDLIQTQEIQFPSQMSPELQDIIHAFLDKDPADRITLDDASEHVWFMKMKL 240
[Close]
BLAST of mRNA_F-serratus_M_contig105.497.1 vs. uniprot
Match: A0A7R9U356_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U356_9STRA)

HSP 1 Score: 182 bits (461), Expect = 4.070e-46
Identity = 129/384 (33.59%), Postives = 190/384 (49.48%), Query Frame = 1 
Query:  181 RYVTVPRGVEYCPSFSSLPHKGSLAKVNQYVVIRDLGQGSSAEVRLCRRMRNDGESKTSNNLEDVAAAGEGESGQAERATQADMAQSFVEGDDGSGLYAMKIYNRAKMMKRGARFARGRERRPDGVSLEGAQRPEKFVKVQEEIAIMKKLLHPNIVQLIEVMDDPLASSLIIVMGYVERGSIMHCVEPERGRYASPITGSCFDAPTAARYFADILNGLEFLHLQLIAHRDLKPENVLLGNDDRAKIADFGASQYFADDAQRTPKSARSLARSSSRAQIFEAEGTWGFWAPEMCGAGGEGAAFNAYAADAWAAGVTFWCFLYGTVPFFSSN-PVELFQAITT---DPAPIPDEADGTLRGFLEHLLDKSPEMRLTVTEALEHPWI 1320
            R  +  R  E   +  SL + G L  +N+YVV+R +  GS + V    R           N E V                            G   YA K+ +++ + +R     R  ER+     ++ A        V  E+A+MKKL HP IV L+EV+DD  +  ++++M  +  G IM   + E+     P  G+      AA     +L G+ +LH   +AHRDLKPEN+L  +D R KI+DFG S +F ++  +  +  R+L R  SR Q+ + EGTW FWAPEMC +  +   ++AYAAD WAAGV  W F++GT+PF +S  P +LF  I     +    P E    L  F++ LL K P+ R++V +AL H WI
Sbjct:   56 RSASASRVEETSQAIVSLDNNGVLESINEYVVVRHIADGSFSNVYEVER-----------NEEGV----------------------------GPVRYAAKVMHKSLLRRR-----RNIERKGRKTVVKTA-----LDNVAREVALMKKLEHPCIVDLVEVIDDVESDLIVMIMELMGNGPIMDYSDQEQRFVYQPTQGT-LPEEDAAWTIKAVLLGIGYLHQNHVAHRDLKPENILRSSDGRVKISDFGVSHFFEEETAKERRPLRTLIRQESRGQLTKTEGTWAFWAPEMCTSTRK-PQWSAYAADLWAAGVCLWVFIFGTLPFDASGGPTDLFDMIERYDDEHVDFPHEVSPDLADFIKRLLRKDPKDRMSVPDALAHRWI 388
[Close]
BLAST of mRNA_F-serratus_M_contig105.497.1 vs. uniprot
Match: A0A7K9HDN3_9AVES (KKCC1 kinase (Fragment) n=1 Tax=Bucco capensis TaxID=135168 RepID=A0A7K9HDN3_9AVES)

HSP 1 Score: 172 bits (437), Expect = 1.860e-44
Identity = 110/299 (36.79%), Postives = 155/299 (51.84%), Query Frame = 1 
Query:  439 SFVEGDDGSGLYAMKIYNRAKMMKRGARFARGRERRPDGVSLEGAQRPEKFV---KVQEEIAIMKKLLHPNIVQLIEVMDDPLASSLIIVMGYVERGSIMHCVEPERGRYASPITGSCFDAPTAARYFADILNGLEFLHLQLIAHRDLKPENVLLGNDDRAKIADFGASQYFADDAQRTPKSARSLARSSSRAQIFEAEGTWGFWAPEMCGAGGEGAAFNAYAADAWAAGVTFWCFLYGTVPFFSSNPVELFQAITTDPAPIPDEAD--GTLRGFLEHLLDKSPEMRLTVTEALEHPWI 1320
            ++ E DD    YAMK+ ++ K++K+   +   R   P G      ++P+      +V +EIAI+KKL H NIV+LIEV+DDP   +L +V   + +G +M     +            F    A RYF DI+ G+E+LH Q I HRD+KP N+LLG+D   KIADFG S  F                  + AQ+    GT  F APE     G+  +F+  A D WA G+T +CF+YG  PF     + L   I T P   P+EA     L+  + H+LDK+PE R+TV E   HPW+
Sbjct:   28 AYNENDD--KYYAMKVLSKKKLLKQ---YGFPRRPPPRGSKASSGEQPKAMAPLDRVYQEIAILKKLDHVNIVKLIEVLDDPAEDNLYMVFDLLRKGPVMEVPSEQP-----------FGEEEARRYFRDIVLGIEYLHYQKIIHRDIKPSNLLLGDDGHVKIADFGVSNQF----------------EGNDAQLSSTAGTPAFMAPEAISDTGK--SFSGKALDVWAMGITLYCFVYGKCPFIDEYILGLHNRIKTKPVEFPEEAQISAELKDLILHMLDKNPETRITVPEIKVHPWL 292
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKE4_ECTSI6.780e-13058.46Ca2+/calmodulin-dependent protein kinase kinase be... [more]
A0A6H5JDN4_9PHAE1.780e-12353.66Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A4D9D4E9_9STRA3.970e-5536.79Protein kinase domain-containing protein n=3 Tax=M... [more]
A0A7S2RI55_9STRA6.030e-5436.83Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4E3P3_9STRA1.890e-5335.73Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A7S3Y6M6_HETAK2.240e-5244.86Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
F0YAL4_AURAN2.050e-4938.19Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2CYB8_9STRA3.040e-4642.28Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7R9U356_9STRA4.070e-4633.59Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7K9HDN3_9AVES1.860e-4436.79KKCC1 kinase (Fragment) n=1 Tax=Bucco capensis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig105contigF-serratus_M_contig105:70529..78957 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score195.7
Seed ortholog evalue4.2e-47
Seed eggNOG ortholog44056.XP_009037349.1
Preferred nameTIF35
KEGG koko:K03248,ko:K05666,ko:K07359,ko:K20304
KEGG TC3.A.1.208.2
KEGG Pathwayko01523,ko01524,ko02010,ko03013,ko04140,ko04152,ko04211,ko04920,ko04921,ko04976,ko05034,map01523,map01524,map02010,map03013,map04140,map04152,map04211,map04920,map04921,map04976,map05034
Hectar predicted targeting categoryother localisation
GOsGO:0001732,GO:0002181,GO:0002183,GO:0002188,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005852,GO:0006412,GO:0006413,GO:0006415,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010494,GO:0016043,GO:0016282,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0032984,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043614,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070993,GO:0071540,GO:0071541,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.translation initiation factor activity
EggNOG OGsKOG0122@1,KOG0122@2759,KOG0585@1,KOG0585@2759
EC2.7.11.17
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko02000,ko03012,ko04131
Exons9
Model size2000
Cds size1206
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928873.2863479-UTR-F-serratus_M_contig105:70528..708551622928873.2863479-UTR-F-serratus_M_contig105:70528..70855Fucus serratus maleUTRF-serratus_M_contig105 70529..70855 +
1690962609.476106-UTR-F-serratus_M_contig105:70528..708551690962609.476106-UTR-F-serratus_M_contig105:70528..70855Fucus serratus maleUTRF-serratus_M_contig105 70529..70855 +
1622928873.5171187-UTR-F-serratus_M_contig105:78490..789571622928873.5171187-UTR-F-serratus_M_contig105:78490..78957Fucus serratus maleUTRF-serratus_M_contig105 78491..78957 +
1690962609.5772305-UTR-F-serratus_M_contig105:78490..789571690962609.5772305-UTR-F-serratus_M_contig105:78490..78957Fucus serratus maleUTRF-serratus_M_contig105 78491..78957 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928873.298285-CDS-F-serratus_M_contig105:70855..710021622928873.298285-CDS-F-serratus_M_contig105:70855..71002Fucus serratus maleCDSF-serratus_M_contig105 70856..71002 +
1690962609.4898627-CDS-F-serratus_M_contig105:70855..710021690962609.4898627-CDS-F-serratus_M_contig105:70855..71002Fucus serratus maleCDSF-serratus_M_contig105 70856..71002 +
1622928873.3942966-CDS-F-serratus_M_contig105:71185..713081622928873.3942966-CDS-F-serratus_M_contig105:71185..71308Fucus serratus maleCDSF-serratus_M_contig105 71186..71308 +
1690962609.4978225-CDS-F-serratus_M_contig105:71185..713081690962609.4978225-CDS-F-serratus_M_contig105:71185..71308Fucus serratus maleCDSF-serratus_M_contig105 71186..71308 +
1622928873.439078-CDS-F-serratus_M_contig105:71658..718361622928873.439078-CDS-F-serratus_M_contig105:71658..71836Fucus serratus maleCDSF-serratus_M_contig105 71659..71836 +
1690962609.5059009-CDS-F-serratus_M_contig105:71658..718361690962609.5059009-CDS-F-serratus_M_contig105:71658..71836Fucus serratus maleCDSF-serratus_M_contig105 71659..71836 +
1622928873.4500778-CDS-F-serratus_M_contig105:72085..721921622928873.4500778-CDS-F-serratus_M_contig105:72085..72192Fucus serratus maleCDSF-serratus_M_contig105 72086..72192 +
1690962609.521409-CDS-F-serratus_M_contig105:72085..721921690962609.521409-CDS-F-serratus_M_contig105:72085..72192Fucus serratus maleCDSF-serratus_M_contig105 72086..72192 +
1622928873.4638186-CDS-F-serratus_M_contig105:72665..727751622928873.4638186-CDS-F-serratus_M_contig105:72665..72775Fucus serratus maleCDSF-serratus_M_contig105 72666..72775 +
1690962609.5319026-CDS-F-serratus_M_contig105:72665..727751690962609.5319026-CDS-F-serratus_M_contig105:72665..72775Fucus serratus maleCDSF-serratus_M_contig105 72666..72775 +
1622928873.4733598-CDS-F-serratus_M_contig105:73341..735121622928873.4733598-CDS-F-serratus_M_contig105:73341..73512Fucus serratus maleCDSF-serratus_M_contig105 73342..73512 +
1690962609.5403304-CDS-F-serratus_M_contig105:73341..735121690962609.5403304-CDS-F-serratus_M_contig105:73341..73512Fucus serratus maleCDSF-serratus_M_contig105 73342..73512 +
1622928873.483545-CDS-F-serratus_M_contig105:73691..737521622928873.483545-CDS-F-serratus_M_contig105:73691..73752Fucus serratus maleCDSF-serratus_M_contig105 73692..73752 +
1690962609.5483205-CDS-F-serratus_M_contig105:73691..737521690962609.5483205-CDS-F-serratus_M_contig105:73691..73752Fucus serratus maleCDSF-serratus_M_contig105 73692..73752 +
1622928873.4936047-CDS-F-serratus_M_contig105:77656..779341622928873.4936047-CDS-F-serratus_M_contig105:77656..77934Fucus serratus maleCDSF-serratus_M_contig105 77657..77934 +
1690962609.5576117-CDS-F-serratus_M_contig105:77656..779341690962609.5576117-CDS-F-serratus_M_contig105:77656..77934Fucus serratus maleCDSF-serratus_M_contig105 77657..77934 +
1622928873.5062597-CDS-F-serratus_M_contig105:78459..784901622928873.5062597-CDS-F-serratus_M_contig105:78459..78490Fucus serratus maleCDSF-serratus_M_contig105 78460..78490 +
1690962609.5676184-CDS-F-serratus_M_contig105:78459..784901690962609.5676184-CDS-F-serratus_M_contig105:78459..78490Fucus serratus maleCDSF-serratus_M_contig105 78460..78490 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig105.497.1prot_F-serratus_M_contig105.497.1Fucus serratus malepolypeptideF-serratus_M_contig105 70856..78490 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig105.497.1

>prot_F-serratus_M_contig105.497.1 ID=prot_F-serratus_M_contig105.497.1|Name=mRNA_F-serratus_M_contig105.497.1|organism=Fucus serratus male|type=polypeptide|length=402bp
MRNDGESKTSNNLEDVAAAGEGESGQAERATQADMAQSFVEGDDGSGLYA
MKIYNRAKMMKRGARFARGRERRPDGVSLEGAQRPEKFVKVQEEIAIMKK
LLHPNIVQLIEVMDDPLASSLIIVMGYVERGSIMHCVEPERGRYASPITG
SCFDAPTAARYFADILNGLEFLHLQLIAHRDLKPENVLLGNDDRAKIADF
GASQYFADDAQRTPKSARSLARSSSRAQIFEAEGTWGFWAPEMCGAGGEG
AAFNAYAADAWAAGVTFWCFLYGTVPFFSSNPVELFQAITTDPAPIPDEA
DGTLRGFLEHLLDKSPEMRLTVTEALEHPWIRMRLVDGAGEKACLPSTGD
VGDPGGVSRGIDGGIKDARATAATNSATAERTGDQGWGSSWCSRIRSRTS
R*
back to top

mRNA from alignment at F-serratus_M_contig105:70529..78957+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig105.497.1 ID=mRNA_F-serratus_M_contig105.497.1|Name=mRNA_F-serratus_M_contig105.497.1|organism=Fucus serratus male|type=mRNA|length=8429bp|location=Sequence derived from alignment at F-serratus_M_contig105:70529..78957+ (Fucus serratus male)
CTTCTACCGCCGGTTCTTCTCGAAAACTTACAATGCTACCAAATCTACGA
GTCAGCCGCTCCACATACAACACGATACACGGTCACCTGCAGGCCCGAGG
CGTCACAATCCTCGAGAGCGTCGCCTTCAACACGATCGACTGGAACCTAA
AAAACGCCTCGCGAGGATGCTTCAACCATTCGATACGTAACCGTTCCTCG
TGGGGTTGAATATTGCCCTTCCTTTTCCTCGCTGCCACACAAAGGTTCAC
TTGCAAAGGTGAACCAATACGTTGTTATCCGCGACCTGGGGCAAGGTTCC
TCCGCCGAGGTGAGGCTGTGCAGACGGATGCGAAATGACGGCGAGAGCAA
GACAAGTAACAATCTCGAAGACGTGGCAGCTGCAGGAGAGGGCGAAAGCG
GTCAAGCCGAGAGGGCGACTCAGGCGGACATGGCCCAGAGTTTCGTCGAA
GGCGACGACGGCAGCGGTCTCTACGTAAGTTTGATGGGGAGCTGCCTCGG
TCGGCCGGCCGGCCGTTTGACCTTCTTTTTCATATCTTGACGGCTGGGTC
CACCGACGAGGGGTCTTGACTGCTCAGCTGTCGCCTTTTGAGATCTTCCC
CCCCTCCCCTCCCCTGTGTGCACGCTTTAATTCTTCCCTTTTCCTGTACA
CGGGTAGGCGATGAAGATTTACAACAGAGCGAAGATGATGAAGCGCGGCG
CCCGGTTTGCCCGAGGGCGGGAGCGGCGACCGGACGGGGTTTCACTGGAA
GGCGCTCAACGTCCCGAGAAATTCGTCAAGGTTAGATCGCAATACCATTG
TCGCATGGCTTGATAAGGCCAAAACCAGCAGTTGAGCTAGAGTCGGTTTG
GTTGTGGTAATAATATGCTAAACAAATGATGAACACTGGAAGGACATCAG
TTGCACGTGGCACGTATCGTGTACTTGGGCATGGAGGAGAGATGTAGGGA
AAATGTCGTTGATGCTGTAGAGGCTCTATTCTTAGATTTCTCTCCTCCAA
AACGCCGTGGCCATGGCAAAACACGCGAGGGGATCGAATGGATGAAACAC
CCTTTGTCTCCCGCGGCACTGTCAAAACCGTGTTTCCCTGCTTGGGCACG
GGCAAATAAAAATCTGCGCGTGCTTCTTAGGTTCAGGAAGAGATTGCAAT
CATGAAGAAGCTCTTGCACCCCAATATTGTTCAGCTTATCGAGGTCATGG
ACGATCCTCTCGCCAGCTCTCTCATCATAGTGATGGGTTACGTGGAGCGA
GGGTCCATCATGCACTGTGTCGAGCCGGAGCGGGGACGCTACGCGAGTCC
GATAACCGGTGAGGAAGATCCTTCCGCTACGGCCAGTTTCGGTACTTATG
ATTATTGTTTCCTTTTCTGCACACGCTCTTCGCATACTGTTAAGAAAGTA
GTAGTGGCATCAACGGGGTTGGTACATCAGCCTTGGAAAGGATGCGTAAT
CTGAATAGGCGTACATCCCATTCCCCCGCCCCGGACGTACACCCGTGCCC
TCGCTAGACCAAAAGCCGGGAACCTTCGCTTTACGCCGACATGCGCGTGT
GCCACAGGTAGTTGCTTCGATGCTCCTACTGCGGCTCGCTACTTCGCAGA
TATTCTGAATGGTCTCGAATTCCTGCACCTGCAGCTTATCGCGCACCGAG
ACCTCAAACCTGAGGTAGGTGAGGAAGGTCGAAGTTAAGAGTCTTCATTG
ACATCCTCGACCTCCTGTGTAAAAATCGCAGTCGAACGATCCGACTGCTT
GTACAGATCTCGATCCATTCTTGTCCCAGAAACAGTTTAATTTTCTTCAG
CGTTGTTCTCGTCATCTCTTAACTACTCACACGCTTTGCGACCTACTTGT
CGCCCCAAACCAAATTTTTGAGGCTCATTCAAGCCCGTGCGAGTATTTCC
ACGGCTTAGCCGAGGGCCTATCGCGTCGCAGCAGGCCGGAAGACAACAAA
TTAAAAGGGGCACAGGAATTGTGCATGTTCAGATGAAACATGCTCGCTCT
CCTCGTCACGCTAGACTGGTTACTTCCCGCACGATGCGCTTTTACCCCAG
GAGGCTGATAAATGCCCTTCTTGTCCCTTCTTCGCGCTTCCTCTCTGTCG
TCTGTTTCGCGTGTGCGCTACGTTCGGTCCACAAAAGAACGTGCTGCTCG
GGAATGATGACCGCGCAAAAATAGCAGACTTCGGGGCTTCTCAGTACTTT
GCCGACGACGCACAGCGGACGCCAAAGTCGGCCCGCTCTCTTGCTAGGTC
AGAACCTTTGGATCGTGTCCTGTAAGGCGGACGGAATCCGCCACAACTTC
TCATCGTCTTGTTTAAAATCTAGGACGACGAAAACGCCTCGCCGCTCGAA
ATAGGTTAGAGTACACGCGTGCCTTTCATTGTTTTTTCGTCCCGTATCGA
CGATCGTGGAGGTGCCAAAACCGAGTGTCACGAGCTCTGCTCCGCTGGCG
GCAATCGCCCTGTGCGTGCCGTATTGACGCGAAGAGCTGCGCTTTTGCGC
GACAATACCGATGCTTGGCTTGAGCGCTTTGTTCGAGGCGTTCTACTGAC
TTTGACCAGCTTCAGGTACGTAACGTCGGACACTCTGTAGGAGGTATAGG
TTATTGAGTGTTCCTACAACACCCGAGGGTACCTACTAGTATTTTGCCGC
GCGTGTCGTGCGCTCGGATTTCACGCCGAAATTCACACAAAGTCTAACGG
AATTCAATCTACAATACTCAAGATTTTCTGGGATAGAGCTATTTTTGATC
AATGTCAACTGCCCTGTGTGTTTCCACATTTTGGGTGTGTGGCGGCGGCG
GGGTGGGAGACAGGTCTAGTTCACGAGCCCAGATTTTCGAGGCAGAAGGA
ACGTGGGGTTTCTGGGCGCCCGAGATGTGCGGCGCAGGGGGCGAAGGCGC
GGCGTTCAACGCCTATGCCGCTGACGCCTGGGCCGCAGGGGTGACGTTTT
GGTGCTTCCTATACGGCACGGTTCCATTTTTCAGGTCGGTCAGATTCATC
AGCCCAAATAAATGATCGTAAGGCGAAAAAACTCTTCACCTCACTCCTAC
CACCCACCGCGGGTGCCGTTTTTTTGGTCCTGAGAGTTCAGTGTCGAGTG
AAACATGCATCCGCAAAACTGCCTTCCGCCCCTCTGCCTGATTCTCCCCC
CGCCTCCCTCAAGCTCGAATCCCGTGGAGCTATTCCAGGCCATCACGACC
GACCCGGCACCAATACCGGACGAGGTAAGCACCGAGACGTAGTAAGGCTA
TTTTGAAGAAAGATATTCCCGTGCACCCGGTCGAAGTATTTTTGCCGTGA
ACACCCTGATGGGTCAAGGTTTGATGTCGTGGCGACGTGTTTTGCGAACA
AAGTCACCGCAGTCGGGCGCTTGCACTTCCAAGTACGTGCTTTTCGTGTA
CCGCCTTAGAGCAAGGGCGTTCGGATCATTTTTCTGACTTCTCCAAAGAC
GGAAAACGTAGTTCGTCGCCTTTAGTCCCCCGCGTTCGAACATCCTCGCG
CGGGATAATTCGAAAACGTCGTGGCACCGACCTTAAACCATTTTCTTCGG
GTGAAAATATGCTGCTGTGCTCACGAAAGCTTAGAGGAGCCTGCGGCTTC
GCGAGCGCGATCGCACGAAACTTGCGGTATTCGACCTCCGAGCCCATTGC
CCGCTTGATGGAAAGTCTCAGCGTTGACATATCTTACACGGGAGAGTGAT
GCTGTGGGTAGGGTTGATGCATGGTCGAGATGATCACATATCACAGACTA
ATATAGAACTTGTATATTATTATCACTACACCCTAGATAGAAGGGGAGTA
TGAAAGCAGTCCCCCCTATAGTAACGTGAATCGATAAGACCCCAATAATG
CGGTGTTACTCCTGACCAGTAACTCTTTCATCCCCCCTGCTCCATGTTTG
GTCAACATCTAATTTACCAAATATCCGGACTGTCATTTCCCTTTTTTTTA
GACGACAGTCATCAAATGCTTCCATCCTTTTAAATAAAAATAGCATGTTC
GAACTTATACCCAACGTGACTACAAAGTTATTCCGGCTTCCCAAAAGCTT
GATTGCTGCTTCTGATGGTCTCTCAAACATTCATGTCGCTAGTACTAACA
GCAGAATTGGTTCTAACGGATTATACCGCGTACAGTAAGTTCACAAACGT
TCACTTCAGCAATAATCTCTGTGCAGGTAAAAACACCTCAGAAAAACTTT
GCTCCGCTTTTGTCTAGTATTTGGTTGAATCCCCGTGGACTTCAAAGTTA
TCTCCGTAAAACCCCCGACCTACACTAAAACGTACCAGGTACCCTAAAGA
CAGTAGACGAGTCGTATATGGTATTCGCGTATGACATAATCCATGATATG
TTATACTGTAATTGGTATCAATTCAGGTGGTGCCCATTATCGTAGCTCTC
TCTTGTCATTTAGGATAAGAGAAGTCAATTTGACGGAAAAGCTCAGCTTT
ACTGGACTGATATTTCCCTACATTTTCGTTTCAGACTACATAAAAAATGA
TGCATAGTTAACTAAATTACAGAACAGTACTCGAGCAACATTTCCAGACA
AAAAATATACTCTAGTCTTCTGCTGCAGTCTCGAAAAACATTTGAAATAT
AGTGTCATAACTCGAACATTGGGCAAACGAAAAATGCACTAAGCGATACT
GTTTTGAGTATTGTGACAATTTGATATTGCACTACTTGTACCTCTGTTAG
TTTCTTCAACATAATCTCAAGTTGTACGAGAATTACTGTAACACAAAAAT
AACGCGAGTATACCCTCACAAACAACAAGCCGGTTATGGTCTTTGAGGTC
AGCTTGGTATCAGGAAGGTGTTCTTTATCCATCGGGCTCGCACATCCCAT
TCGCGTTTTCCATCATAATCTTTATCTCCTTCTCCGTAGTATTTTTCTTT
CGCCTGCAAAAATACTGAAAGACGAGAAACAGTAAATGAACAAAACAAAC
AAACGCTCAAAACCTAGTCCCCTCGCAGCAGACAGCAGTACAGCCGCTGT
TTGGCGTACGGCGCGTCTATCCATCATCCGCCGGGATCAAACTGCTTGTT
GTATTGTTCGCTCCTCCACTGCACCACCTCTTCTAATCGTTGCCATCCCA
TCGGAAAAATCGCAATTTCTTGAAAGGCGGCCTGTTGTTTGGCTGTTTCC
TCGGGTTTCATCCCAATAACGCCTTGAAGAAAGAATATGACGTCCATTAA
GCCTCGGCTATCGGTGTGCCAACAGCCGCCGACTGTTACTGATCGTATCT
CCCTGTTGGAGAGACGCGGCTGTCCGGACGCTTCCACCCCCGTAACAGCT
CGTGATGATTCGAGCGTTCTCCGGTCAATCTTCATTTTCCCTCCGATCTT
CTCCTAGTGTACATTGAGCGGAATTTCCCCTCGCTTGTCCTGATTACTCC
TCTCGGCTTCATTTTCCCATGCGTCCCCGCCATATATCATCGTCCGCCTG
TGTTTTGAAAAAAAAACGTCGCTCTCGATCTGGTCGTCCCCCAACGACTC
AGGCTCAGCACTAGCCAGCGGTGACGGGGATGTGAAAAGTCTGATGGCGA
CGGGATGAGCGGATGCTGTTTAACTGGCAGCATGTAGTGAGGAGAATAAT
ACCGAGAATAGGCCATGAAATGCCGTTCACACTGTTATTTGCCCTCTCTT
ACACAATGTTTCATTGTAATCAAGAGGGACTGGCAGAGGCATCGGTGAAC
AGTACTGTTATGGATAATTGTTGACGGCAATGATAGAATATTATCAGCTA
GTTTGACTCATCCCTATACACCTTGAGTTCCATCGGCATGGACAGCCTGA
TCCTCATATCGCGCATCCAAGTCAGTTTTCTTTCCTCTTCTGAACAAAAA
GGAACCGTAACACTCTTACCACCAGAACATGTCCCTTCTTCTGGATTCAT
TGTTGCTACCCCGCGTTCGATGAAAGTGATTTTCACCAAATTCTTCTTAT
CACCAGATGAAAACAGAGTGCTCTCGCAACACACGTTCTCGCAGGGCTCC
CTTTCCGCCAGGGTTCCCTCCACTCCTAGGCTAGCGCCCCTCTTGGCGCT
GGCTCTAGGGCTGGTGATCTCCCTAGTGCTACCCCGACCGGTATTTGCCA
AGGTGCTAACACCGGCGCTCTTTGGACCGGTGCTGTTTCTACTGCTCTCC
TTCGGAACATGGTTGCGGGGCTCCCTATCCGTAAGGGTTGCCTTCACTCC
TAGGCTAGCGTCCCTTCTGGCGCTAGCTCTGGTGCTGGCGCTTTCCCTAG
CCCTCTCTCGACCGGTGGTGTCTCTCCTGATCTCCTTAGGCAGGAGACTC
TTCGTCCTAACTTGAACATGTCCTTCAAAGCTTTGCTCTGCTGTACAGTA
CCAGTACTGAAAGGTTAAATTCCAGAAATCCCGAAGTTTCCAAAAACACA
AAACAACAGCCTCCTGATCGTGGCCCTAGCTCCAGATAATCCTGGTATCA
CTAGTTTGACGGAAAATATCAGCGTTGGGGCACGTCTTACACGGGAGAGT
GATGCTGTGGGTAAGGTTGATGCACGCTCGAGATGATAACATATCACAAG
ACGAATGCAGAAGCGGTACATTTTTTCATTTCATTGGTGTCCAGAAAAAA
GTTGGtAACATGACCAACACTGCACTGCACGGGACACTGAAATGGTAGGG
TTCTACACCCTAGATAAAAGGGGAGTGTTAAGCCAGTCCCCTCAGTAACA
ACACAAATCTGGACGGCCCCAATAATTTGGTGCTAGTCTTGACCAGGGTC
ATCTATCCGCATTCTGATCAAAACATCGTTAACTCTTTCACTGCTTGAAC
GATGGAGGGTCTCATGCATCCGATATGTAACAAGCAGCATTCCGCCATTC
AGTCTTGAGAGGCTTTTATGTTTTCCACCAGAGGGGTATTTCATGCTTGT
TTCAGTCACTACTATGGTCATGAGGAGTGAAGGACGAAGCGTGCGTGGAG
AGAAGGCGAACGCTGAGATCCTCTTCTCCACTGTCACTCATATACTTTCC
GCTTCGATCACGAGCGAAATGACAAGTAATAGAAGGAACTCCCCCCATAC
CCCATTCGTCCCTCCCCCCGAACATTCGTGACTCCCTGCCACGCCGGGAT
CGTTCTACTACGACTGACCGTCCGTCAGGCCGATGGCACACTCCGCGGTT
TTCTCGAGCATCTCTTGGACAAAAGCCCCGAAATGCGACTGACCGTAACC
GAGGCTCTCGAACACCCCTGGATCCGGATGCGCCTGGTCGACGGCGCCGG
CGAAAAGGCTTGTCTTCCCTCCACGGGCGATGTGGGCGACCCTGGTGGTG
TCAGTCGCGGCATCGATGGTGGCATCAAAGATGCTCGCGCCACTGCCGCT
ACCAATTCCGCTACTGCTGAGCGCACTGGTGACCAAGGGTGGGGCTCGTC
GTGGTGGTGAGAAAAAAAGTGCGGCGTTCGCCAGTTCTTGGGGCGACGCT
TTGACGCTCTTGCCACTACTGTTTTCGGAGACGCATAGTAACAGTGGGAT
AAGCGCCTCAGCCGtTATTTTTTTTTATTGTATCGGGGCGGACGAGACTG
TCGTCTTGCGGTTCTTCGGACCTCCAAAGTTCCTTTTTTGTTTTTGTTTT
TGGGAGGAATTGGGGTGGAGGTGAGTGTGGAACACGGCGCCTGCAGTAGA
AGCGCCTGAGAAATACATCGCCATCGCATTCTCAAGCTCGGGTCGTCCCT
TGCTTGTTGTGAATCAACCGCGGTGTTGCACACTCAGAGCGGCTTGCGGT
GGCTTCCCACTACAGTATACTTTCTTTCATTTACCTCTTCGGGGCGAAGC
ACGATATCTTTGGTGCTGCTCCGAGACGCGACGATCGCCGCCATGATCCT
TGCACTTCAGTTCAGCAAGCCCTCGCCGGTCGATCCCCTCCCATCCCTCA
CCCGTTGTTGCCCACATTTGGCCGAACGAAGCTCAAGGATAAGATCCAGG
ACGTCAAGATGAGGTCAACGCGGGCGTAGAACGCCGTCAGGGCAACAGCG
GCCACCACCGCCACCGCCGTAGCGGCGCTCGGTGGCCTCAGACCACTAGC
TCGGGGAGAGGGAGGAAAATTCTTGACGTGGAACAGCCGCGAAATCCTCT
TCGGCAATCGCCAGGAGTTTGCTGCTCTGCGAGCCAGCGTCCAGCGAATC
TACAAAAGTAGCGAAATATACCGTATCACGAAGACGACAGCGCACGAAGA
CACGGGACTGCGGCGCAGGTAGTTCTTCCTGTGTTTCCTTCCGTCCTCGA
TAAAGTAGCGCCTGTGCGCGATCGATGGCTGCAATATTCGTCGACAAAGC
ACCAGCTGGTCTGTTCTTACCGAGTACGGGTCGATGTTCACTCACAACAA
CGCAGGCGGATATAATCATCCCAGGGTATGTTTGTCCCGAATTTGAGAGA
CCAAATTATTTTTTATTTTGCCCTTGTAC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig105:70529..78957+

>mRNA_F-serratus_M_contig105.497.1 ID=mRNA_F-serratus_M_contig105.497.1|Name=mRNA_F-serratus_M_contig105.497.1|organism=Fucus serratus male|type=CDS|length=2412bp|location=Sequence derived from alignment at F-serratus_M_contig105:70529..78957+ (Fucus serratus male)
ATGCGAAATGACGGCGAGAGCAAGACAAGTAACAATCTCGAAGACGTGGC
AGCTGCAGGAGAGGGCGAAAGCGGTCAAGCCGAGAGGGCGACTCAGGCGG
ACATGGCCCAGAGTTTCGTCGAAGGCGACGACGGCAGCGGTCTCTACATG
CGAAATGACGGCGAGAGCAAGACAAGTAACAATCTCGAAGACGTGGCAGC
TGCAGGAGAGGGCGAAAGCGGTCAAGCCGAGAGGGCGACTCAGGCGGACA
TGGCCCAGAGTTTCGTCGAAGGCGACGACGGCAGCGGTCTCTACGCGATG
AAGATTTACAACAGAGCGAAGATGATGAAGCGCGGCGCCCGGTTTGCCCG
AGGGCGGGAGCGGCGACCGGACGGGGTTTCACTGGAAGGCGCTCAACGTC
CCGAGAAATTCGTCAAGGCGATGAAGATTTACAACAGAGCGAAGATGATG
AAGCGCGGCGCCCGGTTTGCCCGAGGGCGGGAGCGGCGACCGGACGGGGT
TTCACTGGAAGGCGCTCAACGTCCCGAGAAATTCGTCAAGGTTCAGGAAG
AGATTGCAATCATGAAGAAGCTCTTGCACCCCAATATTGTTCAGCTTATC
GAGGTCATGGACGATCCTCTCGCCAGCTCTCTCATCATAGTGATGGGTTA
CGTGGAGCGAGGGTCCATCATGCACTGTGTCGAGCCGGAGCGGGGACGCT
ACGCGAGTCCGATAACCGGTTCAGGAAGAGATTGCAATCATGAAGAAGCT
CTTGCACCCCAATATTGTTCAGCTTATCGAGGTCATGGACGATCCTCTCG
CCAGCTCTCTCATCATAGTGATGGGTTACGTGGAGCGAGGGTCCATCATG
CACTGTGTCGAGCCGGAGCGGGGACGCTACGCGAGTCCGATAACCGGTAG
TTGCTTCGATGCTCCTACTGCGGCTCGCTACTTCGCAGATATTCTGAATG
GTCTCGAATTCCTGCACCTGCAGCTTATCGCGCACCGAGACCTCAAACCT
GAGGTAGTTGCTTCGATGCTCCTACTGCGGCTCGCTACTTCGCAGATATT
CTGAATGGTCTCGAATTCCTGCACCTGCAGCTTATCGCGCACCGAGACCT
CAAACCTGAGAACGTGCTGCTCGGGAATGATGACCGCGCAAAAATAGCAG
ACTTCGGGGCTTCTCAGTACTTTGCCGACGACGCACAGCGGACGCCAAAG
TCGGCCCGCTCTCTTGCTAGAACGTGCTGCTCGGGAATGATGACCGCGCA
AAAATAGCAGACTTCGGGGCTTCTCAGTACTTTGCCGACGACGCACAGCG
GACGCCAAAGTCGGCCCGCTCTCTTGCTAGGTCTAGTTCACGAGCCCAGA
TTTTCGAGGCAGAAGGAACGTGGGGTTTCTGGGCGCCCGAGATGTGCGGC
GCAGGGGGCGAAGGCGCGGCGTTCAACGCCTATGCCGCTGACGCCTGGGC
CGCAGGGGTGACGTTTTGGTGCTTCCTATACGGCACGGTTCCATTTTTCA
GGTCTAGTTCACGAGCCCAGATTTTCGAGGCAGAAGGAACGTGGGGTTTC
TGGGCGCCCGAGATGTGCGGCGCAGGGGGCGAAGGCGCGGCGTTCAACGC
CTATGCCGCTGACGCCTGGGCCGCAGGGGTGACGTTTTGGTGCTTCCTAT
ACGGCACGGTTCCATTTTTCAGCTCGAATCCCGTGGAGCTATTCCAGGCC
ATCACGACCGACCCGGCACCAATACCGGACGAGCTCGAATCCCGTGGAGC
TATTCCAGGCCATCACGACCGACCCGGCACCAATACCGGACGAGGCCGAT
GGCACACTCCGCGGTTTTCTCGAGCATCTCTTGGACAAAAGCCCCGAAAT
GCGACTGACCGTAACCGAGGCTCTCGAACACCCCTGGATCCGGATGCGCC
TGGTCGACGGCGCCGGCGAAAAGGCTTGTCTTCCCTCCACGGGCGATGTG
GGCGACCCTGGTGGTGTCAGTCGCGGCATCGATGGTGGCATCAAAGATGC
TCGCGCCACTGCCGCTACCAATTCCGCTACTGCTGAGCGCACTGGTGACC
AAGGGTGGGGCTCGTCGTGGTGGCCGATGGCACACTCCGCGGTTTTCTCG
AGCATCTCTTGGACAAAAGCCCCGAAATGCGACTGACCGTAACCGAGGCT
CTCGAACACCCCTGGATCCGGATGCGCCTGGTCGACGGCGCCGGCGAAAA
GGCTTGTCTTCCCTCCACGGGCGATGTGGGCGACCCTGGTGGTGTCAGTC
GCGGCATCGATGGTGGCATCAAAGATGCTCGCGCCACTGCCGCTACCAAT
TCCGCTACTGCTGAGCGCACTGGTGACCAAGGGTGGGGCTCGTCGTGGTG
CTCAAGGATAAGATCCAGGACGTCAAGATGACTCAAGGATAAGATCCAGG
ACGTCAAGATGA
back to top