|
Homology
BLAST of mRNA_F-serratus_M_contig105.494.1 vs. uniprot
Match: K3WMX5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMX5_GLOUD) HSP 1 Score: 166 bits (419), Expect = 4.490e-43 Identity = 121/379 (31.93%), Postives = 172/379 (45.38%), Query Frame = 1
Query: 121 AGAASGAVVRWVTAPLDVAKIRFQLDYGATP-------RYGSLLETMRSIYAEEGLVSLWRGNVPAIYLWATFGGVQFGMYEHLQRVDFLRANAVSRTRDRGRAHERYRDGRESDGRGGRARGVWDEDGDRASGGLPTAVSNFVYGAVAGCTATVASYPFDITRTALASQGVPKRYTGVTAFLTHTVREAGPRGLYRGLFPAIAMIAPQVGVGFAVYEVIKGNPPTWLMEDLSRGSRSAPVEYTASTMGGGADSDSGGTGNIGRLGGRETKVSIRRAGSDMRDERQSRLEKMWPLVAGATAGMTSKLVVFPLDTIKKRLQAQVMLQRDVSYGILPKYAGSMDALRTILRQEGPPALFRGSMPAILKSGLATGLTFVVFE 1236
AGA +G R + APLD+ KIRFQ+ +Y +LL++++SI++EEGL S WRGN+ A LW ++ +QFG Y L + W E G + ++ GA AG AT +YP D+ RT ASQGVPK++ V + HT G G Y GL + IAP +G+ F +Y + N T DL +GSRS+ R G VS + GA AG+ SKL V+PLDT+KKR+Q + + R SYG++P YA S + R I+R+EG L++G+ P++LKS + TF +E
Sbjct: 17 AGAIAGGATRLLAAPLDLVKIRFQVQQAPISTSAAHKAKYVTLLQSLQSIHSEEGLKSFWRGNLAATGLWVSYSAIQFGCYRGLHAL-------------------------------------WSEPFAAQHGATVSTIN----GAAAGVVATAVTYPLDLFRTIFASQGVPKQFPTVATLVAHTWHTRGLAGFYSGLSATLFQIAPYMGLSFGIYSSL--NTLTASRLDL-QGSRSSE-----------------------RYGNLALAVSY--------------------VGTGAVAGLLSKLAVYPLDTLKKRMQMR-QVPRCESYGVIPHYATSWECFRDIMRREGVRGLYKGTAPSLLKSVVTHSSTFATYE 307
BLAST of mRNA_F-serratus_M_contig105.494.1 vs. uniprot
Match: A0A2I0VJX7_9ASPA (Mitochondrial adenine nucleotide transporter ADNT1 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VJX7_9ASPA) HSP 1 Score: 164 bits (415), Expect = 2.260e-42 Identity = 124/397 (31.23%), Postives = 173/397 (43.58%), Query Frame = 1
Query: 112 DGFAGAASGAVVRWVTAPLDVAKIRFQLDYGATP------------RYGSLLETMRSIYAEEGLVSLWRGNVPAIYLWATFGGVQFGMYEHLQRVDFLRANAVSRTRDRGRAHERYRDGRESDGRGGRARGVWDEDGDRASGGLPTAVSNFVYGAVAGCTATVASYPFDITRTALASQGVPKRYTGVTAFLTHTVREAGPRGLYRGLFPAIAMIAPQVGVGFAVYEVIKGNPPTWLMEDLSRGSRSAPVEYTASTMGGGADSDSGGTGNIGRLGGRETKVSIRRAGSDMRDERQSRLEKMWPLVAGATAGMTSKLVVFPLDTIKKRLQAQVM------LQRDVSYGILPK---YAGSMDALRTILRQEGPPALFRGSMPAILKSGLATGLTFVVFEW 1239
D AGA SGA+ R +T+PLDV KIRFQ+ T +Y +++ + I+ EEGL WRGNVPA+ ++ + +QF + L+ + A+ S+T D H R + ++V G++AGC ATV SYPFD+ RT LASQG PK Y + + H V+ G RGLY GL P + I P G+ F Y+ K TW LS S + + +S + G AG ++K V PLD +KKR Q LQRD+ YG + Y DALR ILR EG L++G P+++KS A +TFV +E+
Sbjct: 13 DAAAGAISGAISRTLTSPLDVIKIRFQVQLEPTSWVLLRREMSKPAKYTGIMQASKDIFREEGLPGFWRGNVPALLMYMPYTAIQFTVLHKLKTL----ASGSSKTDD----HLRL-----------------------------SPYLSYVSGSLAGCAATVGSYPFDLLRTILASQGEPKIYPNMRSAFLHIVQTRGIRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWMMTWNRFRLSNASSANQGDSLSSFQ---------------------------------------------LFLCGFAAGTSAKAVCHPLDVVKKRFQLSSNALQIEGLQRDLKYGARVENSTYRNMNDALRQILRTEGFAGLYKGIYPSLIKSAPAGAVTFVAYEY 327
BLAST of mRNA_F-serratus_M_contig105.494.1 vs. uniprot
Match: A0A7I8L8T7_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8L8T7_SPIIN) HSP 1 Score: 162 bits (411), Expect = 7.240e-42 Identity = 128/411 (31.14%), Postives = 180/411 (43.80%), Query Frame = 1
Query: 94 LPEFLRDGFAGAASGAVVRWVTAPLDVAKIRFQL-------------DYGATPRYGSLLETMRSIYAEEGLVSLWRGNVPAIYLWATFGGVQFGMYEHLQRVDFLRANAVSRTRDRGRAHERYRDGRESDGRGGRARGVWDEDGDRASGGLPTAVSNFVYGAVAGCTATVASYPFDITRTALASQGVPKRYTGVTAFLTHTVREAGPRGLYRGLFPAIAMIAPQVGVGFAVYEVIKGNPPTWLMEDLSRGSRSAPVEYTASTMGGGADSDSGGTGNIGRLGGRETKVSIRRAGSDMRDERQSRLEKMWPLVAGATAGMTSKLVVFPLDTIKKRLQAQVMLQRDVSYGILPK---YAGSMDALRTILRQEGPPALFRGSMPAILKSGLATGLTFVVFEWFRAMKTD*LAGVL 1278
L L D AGA SG + R VT+PLDV KIRFQ+ D+ +Y +L+ + I+ EEGL WRGNVPA+ + + +QF + ++ + A+ S+T D R+ ++ ++V G +AGC ATV SYPFD+ RT LASQG PK Y + + L V+ G RGLY GL P + I P G+ F Y+ K W SR A V+ KV + L + G +G +K V PLD +KKR Q + L+R YG + Y DALR I+R+EGP L++G P+I+K+ A +TFV +E+ +D L VL
Sbjct: 7 LKRALIDATAGAISGGISRSVTSPLDVIKIRFQVQLEPTSSWAFPRGDFYRPSKYTGILQATKDIFREEGLPGFWRGNVPALLMVMPYTAIQFPVLHLVKTL----ASGSSKTEDHLRS---------------------------------SSYLSYVSGGLAGCAATVGSYPFDLLRTILASQGEPKVYLNMRSALVDIVKNRGIRGLYAGLTPTLIEIIPYAGLQFGTYDTFKRWSMAW------NKSRYADVDTV--------------------------KVDVS-------------LSSFQLFICGLASGSCAKAVCHPLDVVKKRFQIEG-LRRHPKYGESLESHAYRNMYDALRQIIRREGPAGLYKGIYPSIIKAAPAGAVTFVAYEY----SSDWLESVL 330
BLAST of mRNA_F-serratus_M_contig105.494.1 vs. uniprot
Match: UPI0018AE4E69 (mitochondrial thiamine diphosphate carrier 2-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AE4E69) HSP 1 Score: 162 bits (411), Expect = 7.240e-42 Identity = 125/398 (31.41%), Postives = 172/398 (43.22%), Query Frame = 1
Query: 94 LPEFLRDGFAGAASGAVVRWVTAPLDVAKIRFQLDYGATP-------------RYGSLLETMRSIYAEEGLVSLWRGNVPAIYLWATFGGVQFGMYEHLQRVDFLRANAVSRTRDRGRAHERYRDGRESDGRGGRARGVWDEDGDRASGGLPTAVSNFVYGAVAGCTATVASYPFDITRTALASQGVPKRYTGVTAFLTHTVREAGPRGLYRGLFPAIAMIAPQVGVGFAVYEVIKGNPPTWLMEDLSRGSRSAPVEYTASTMGGGADSDSGGTGNIGRLGGRETKVSIRRAGSDMRDERQSRLEKMWPLVAGATAGMTSKLVVFPLDTIKKRLQAQVMLQRDVSYGILPK---YAGSMDALRTILRQEGPPALFRGSMPAILKSGLATGLTFVVFEW 1239
L L + AGA +GA+ R VT+PLDV KIRFQ+ T +Y +L+ R IY EEGL WRGNVPA+ ++ + +QF + L+ A S+T D H + + +++ GA+AGC ATV SYPFD+ RT LASQG PK Y+ + + ++ G RGLY GL P + I P G+ F Y+ K +W LS S S + L + G AG SK V PLD +KKR Q + LQR YG + Y DA++ ILR+EG P L++G P+I+KS A +TFV +E+
Sbjct: 7 LKRALTEATAGAIAGAISRTVTSPLDVIKIRFQVQLEPTSSWTLLQRELYKPSKYTGILQAARDIYLEEGLPGFWRGNVPALLMYMPYTAIQFMVLHKLKSF----AAGSSKTED----HLQL-----------------------------SPYLSYLSGALAGCAATVGSYPFDLLRTILASQGEPKVYSSMRSAFVDIIKTRGARGLYAGLGPTLVEIIPYAGLQFGTYDTCKRWMMSWNRYRLSNLSSSRS---------------------------------------------NNSLSSFQLFLCGFAAGTFSKAVCHPLDVVKKRFQIEG-LQRHPKYGARLENRSYKNMFDAVKQILRKEGWPGLYKGLYPSIIKSAPAGAVTFVAYEY 321
BLAST of mRNA_F-serratus_M_contig105.494.1 vs. uniprot
Match: A0A067CVE4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVE4_SAPPC) HSP 1 Score: 162 bits (410), Expect = 1.220e-41 Identity = 123/376 (32.71%), Postives = 173/376 (46.01%), Query Frame = 1
Query: 121 AGAASGAVVRWVTAPLDVAKIRFQLDYG-ATPR-YGS-LLETMRSIYAEEGLVSLWRGNVPAIYLWATFGGVQFGMYEHLQRVDFLRANAVSRTRDRGRAHERYRDGRESDGRGGRARGVWDEDGDRASGGLPTAVSNFVYGAVAGCTATVASYPFDITRTALASQGVPKRYTGVTAFLTHTVREAGPRGLYRGLFPAIAMIAPQVGVGFAVYEVIKGNPPTWLMEDLSRGSRSAPVEYTASTMGGGADSDSGGTGNIGRLGGRETKVSIRRAGSDMRDERQSRLEKMWPLVAGATAGMTSKLVVFPLDTIKKRLQAQVMLQRDVSYGI-LPKYAGSMDALRTILRQEGPPALFRGSMPAILKSGLATGLTFVVFE 1236
AGA +G R + APLD+ KIRFQ+ +TP G+ LL + IY EEG+ + WRGNV A LW ++ +QF Y+ LQ + +S VW SG GA+AG ATVA+YP D+ RT LASQGVPK + + +F +H GPRG ++GL P + IAP +G+ F +Y + DLS + PV + IG GA AG SKL+V+PLDT+KKR+Q Q + R +YG +P+YA S I+R+EG L++G++P+++KSG+ TF V+E
Sbjct: 57 AGAVAGGATRVLAAPLDLLKIRFQVHAAPSTPHDLGTRLLRAVAHIYGEEGVRTFWRGNVAATGLWVSYAAIQFACYQALQNSVVRHDHTLS--------------------------WVW------YSGS----------GAIAGVVATVATYPLDLCRTVLASQGVPKVFPNMRSFASHMYANQGPRGFFQGLSPTVLQIAPYMGLSFGIYSTLA---------DLST---THPVLHA-----------------IGN---------------------------------GAIAGFVSKLIVYPLDTVKKRMQMQG-IPRPAAYGASIPRYASSWRCGLDIVRREGIAGLYKGTVPSLIKSGVTHSCTFTVYE 327
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 246.1 |
Seed ortholog evalue | 2.8e-62 |
Seed eggNOG ortholog | 2880.D8LK96 |
KEGG ko | ko:K15108 |
KEGG TC | 2.A.29.16,2.A.29.28 |
Hectar predicted targeting category | other localisation |
EggNOG free text desc. | mitochondrial transport |
EggNOG OGs | KOG0752@1,KOG0752@2759 |
Ec32 ortholog description | Mitochondrial carrier domain |
Ec32 ortholog | Ec-16_002560.1 |
COG Functional cat. | U |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko02000 |
Exons | 6 |
Model size | 1641 |
Cds size | 1233 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928873.0041084-UTR-F-serratus_M_contig105:9966..9996 | 1622928873.0041084-UTR-F-serratus_M_contig105:9966..9996 | Fucus serratus male | UTR | F-serratus_M_contig105 9967..9996 + |
1690962609.297362-UTR-F-serratus_M_contig105:9966..9996 | 1690962609.297362-UTR-F-serratus_M_contig105:9966..9996 | Fucus serratus male | UTR | F-serratus_M_contig105 9967..9996 + |
1622928873.0886655-UTR-F-serratus_M_contig105:18416..18794 | 1622928873.0886655-UTR-F-serratus_M_contig105:18416..18794 | Fucus serratus male | UTR | F-serratus_M_contig105 18417..18794 + |
1690962609.3727362-UTR-F-serratus_M_contig105:18416..18794 | 1690962609.3727362-UTR-F-serratus_M_contig105:18416..18794 | Fucus serratus male | UTR | F-serratus_M_contig105 18417..18794 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928873.0161417-CDS-F-serratus_M_contig105:9996..10105 | 1622928873.0161417-CDS-F-serratus_M_contig105:9996..10105 | Fucus serratus male | CDS | F-serratus_M_contig105 9997..10105 + |
1690962609.3090544-CDS-F-serratus_M_contig105:9996..10105 | 1690962609.3090544-CDS-F-serratus_M_contig105:9996..10105 | Fucus serratus male | CDS | F-serratus_M_contig105 9997..10105 + |
1622928873.0278974-CDS-F-serratus_M_contig105:15211..15257 | 1622928873.0278974-CDS-F-serratus_M_contig105:15211..15257 | Fucus serratus male | CDS | F-serratus_M_contig105 15212..15257 + |
1690962609.3194191-CDS-F-serratus_M_contig105:15211..15257 | 1690962609.3194191-CDS-F-serratus_M_contig105:15211..15257 | Fucus serratus male | CDS | F-serratus_M_contig105 15212..15257 + |
1622928873.0430567-CDS-F-serratus_M_contig105:16238..16334 | 1622928873.0430567-CDS-F-serratus_M_contig105:16238..16334 | Fucus serratus male | CDS | F-serratus_M_contig105 16239..16334 + |
1690962609.3291745-CDS-F-serratus_M_contig105:16238..16334 | 1690962609.3291745-CDS-F-serratus_M_contig105:16238..16334 | Fucus serratus male | CDS | F-serratus_M_contig105 16239..16334 + |
1622928873.05407-CDS-F-serratus_M_contig105:16704..17032 | 1622928873.05407-CDS-F-serratus_M_contig105:16704..17032 | Fucus serratus male | CDS | F-serratus_M_contig105 16705..17032 + |
1690962609.3406892-CDS-F-serratus_M_contig105:16704..17032 | 1690962609.3406892-CDS-F-serratus_M_contig105:16704..17032 | Fucus serratus male | CDS | F-serratus_M_contig105 16705..17032 + |
1622928873.0661168-CDS-F-serratus_M_contig105:17337..17793 | 1622928873.0661168-CDS-F-serratus_M_contig105:17337..17793 | Fucus serratus male | CDS | F-serratus_M_contig105 17338..17793 + |
1690962609.353308-CDS-F-serratus_M_contig105:17337..17793 | 1690962609.353308-CDS-F-serratus_M_contig105:17337..17793 | Fucus serratus male | CDS | F-serratus_M_contig105 17338..17793 + |
1622928873.0779696-CDS-F-serratus_M_contig105:18218..18416 | 1622928873.0779696-CDS-F-serratus_M_contig105:18218..18416 | Fucus serratus male | CDS | F-serratus_M_contig105 18219..18416 + |
1690962609.3652437-CDS-F-serratus_M_contig105:18218..18416 | 1690962609.3652437-CDS-F-serratus_M_contig105:18218..18416 | Fucus serratus male | CDS | F-serratus_M_contig105 18219..18416 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig105.494.1 >prot_F-serratus_M_contig105.494.1 ID=prot_F-serratus_M_contig105.494.1|Name=mRNA_F-serratus_M_contig105.494.1|organism=Fucus serratus male|type=polypeptide|length=411bp
MPTDQSRDGEVRSTKSTIHLLLPEFLRDGFAGAASGAVVRWVTAPLDVAK IRFQLDYGATPRYGSLLETMRSIYAEEGLVSLWRGNVPAIYLWATFGGVQ FGMYEHLQRVDFLRANAVSRTRDRGRAHERYRDGRESDGRGGRARGVWDE DGDRASGGLPTAVSNFVYGAVAGCTATVASYPFDITRTALASQGVPKRYT GVTAFLTHTVREAGPRGLYRGLFPAIAMIAPQVGVGFAVYEVIKGNPPTW LMEDLSRGSRSAPVEYTASTMGGGADSDSGGTGNIGRLGGRETKVSIRRA GSDMRDERQSRLEKMWPLVAGATAGMTSKLVVFPLDTIKKRLQAQVMLQR DVSYGILPKYAGSMDALRTILRQEGPPALFRGSMPAILKSGLATGLTFVV FEWFRAMKTD* back to topmRNA from alignment at F-serratus_M_contig105:9967..18794+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig105.494.1 ID=mRNA_F-serratus_M_contig105.494.1|Name=mRNA_F-serratus_M_contig105.494.1|organism=Fucus serratus male|type=mRNA|length=8828bp|location=Sequence derived from alignment at F-serratus_M_contig105:9967..18794+ (Fucus serratus male) GCTCGCACAGCGCAACCGGCCGTAGATTCAATGCCTACCGATCAGAGCCG
CGATGGGGAAGTTAGGTCGACAAAGTCTACTATTCATCTATTACTGCCCG
AATTCCTGCGGGATGGATTTGCTGGAGCAGCTTCTGGAGGTGAGATCGAT
AGCAAATCCGCAGCCTCATCAGCGCTGCCAACAAAAGAGGTACCTTGAAT
GTTTTTTGATCCGCGTTGAAGGTCAGGTGCCCTAACCGCTGGGCTCCCTG
CGAGAAATTCTTCGACTGATTTTCACTTTCGGTGCACCTGGGCCTCCCGT
GGCGCCCAGGCCGTTTTGTTGTTTTGGCGTGCCGTGACTTATGCGGCATA
ACAACCACGCATACGTCATGTAGTCTTCACTACATCACTGTAACGGTCAC
GAATACTCTTCAGATGCAATGCATCCTTTACTTTCGAGTACAACAGCATC
GACAATTTACTGAACGACGATTCAGTAGCACTTCCGATACACACCCAAGT
AGTTCTGACCATTTGTGTTGGCCTCGTCAGTCCTCTCTCCTGCGGTGATC
TTCGAAAATCGCTCATCCTCTACATCGAAGTTCTTGTTGTCCTTTTCTCT
CGACAAATACCCCGTACGGTATTCCTTGCGGTACGGAAACTATCTGGGCA
CTAAATACATAAATGGACGCCGCGGCGGAACTCGGGAGGAATCCCGTAAG
TAAGCACCAGATTGACCCTAAATATGGAGATGAGCAGGCTGACGCGGGAC
GGAACTGCGAAAACCGTCTCGCGACACCAAATTATCAGGCGCGAACGCGG
ACAGGGAAATATTCATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGAC
AACCTTACCCGGTTGATCCTTACTCTTTTTTTTTTTTTTTTGCTATGTAG
ATCGCCGTTACTTTCAACATGCCCACTTCATACCAATAGTGGGTGTGGGA
AAGAGAGGCGTAGATTGATTGGTCCATAGTGACCTGCTAAGGCAGCACTC
GTTCGGAACTACCTTGAGGTTTACTGGCCCTGTGCCGACGGACTCTCGGC
AGTGAACGCCATCGGTACGCAATTGCATGACCCAATAAACTCGGGACCTA
CCTGATGGCGTATGGCGGTTTGATATAAATATATGGTCGCCGCCGCGGAA
CTCGGGAGGAATCCCGTAAGTAAGCACCATATTCAGTCTGAGTATGGAGA
TGAGTAGGCTGACGCGGGACGGGACTGCCGAAACCGTCTCGCGAGACCAA
ATTCTCAGGCACGAACGCGGACAGGGGAATCTTCTTTTTCCTGTTCAGCT
GACCACGAGCAGGATTGGCAACCTTACCCGGTTGATCAAAAATCTTGCTA
TATGTGTGACCATACATACATACATACCAGGTATGTGACGATTCATATAC
ACGAACTAGAACGTGCCCTCGTCGCCCAAGTGGTCTATTAATAGTCGATA
ACCTGCACACCGTAAGTAAGCACCAGATTCAGCCTGAGTATGGAGATGAA
CAGGCTGACGCGGGACGGGACTGCCCAAACCGTCTCGCGAGACCAAATTC
TCAGGCGCGAACGCGGACAGGGGAATATTATTTTCCCTGTTCAGCTGACC
ACGAGCAGGATTGGCAACCTTACCAGGTTCATCCATACTCTTGCTATATG
TGTGACTATACATACATACGCCCGCTATTGATTATTATTAGTGTAGAAGT
TGTGAGTTCGAATCTGGTTACCAGAATTTGTGTTCTTTCTTCCGTAGCGG
AAAGCGTGAGAACCTGAGTAAGTAAAATTCGAATGCTGAACTAAACACAA
AATAAAAAGTCGATTAAAAGTGGTAAAAGCGTGGACCGGGGGTAGAGGGG
AAGATCTTTATTAATTTAATAGTGACCACAGTATAGGCAGGATAGCAACG
TCGAGGCCCATCGTCTTAGGATTAGACACACACACACACACACACACACA
AGTGGCATAGAATGACTAGGATGACAGGGCCGGATTGCGTGGTTATGTGC
AATTTAATAAATACACACACACACACACACACATGATCCCCCCTCGGGAG
GATCAATGCGAGTGGCATAGAATGACTAGGATGACAGGGCCGGATTGCGT
GGTTATGTGCAATTTAATAAATACACACACACACACACACACACACACAT
CAGACAGTATTCCAGACAGTAGAAATTGTCTTTCCTACCGTGATAAGTCC
GATTTTGTCGGGTGGTTGGGCGTGGCAAGGGTTTTGTCGCGATTTGGATC
CCTGCTGGTTTGAGTACCGGGTTGTCACCATAATGTGACCCGTTGACCTT
CCTGACGTACGGTACCTCTTTGTGCGTTGTGTCACCGTAGTTTCTTCAGT
TGTAAGGACAATACGCTGGATGTGTGAATCAACAACAACGAACATGTAGC
AAAGATTTAATTTGTTGAACCATTCTTCGCTAAATAATATGGTAATATAA
GTTTCCTTAATTTCTACTATTAATAGTATGGTACACCAAACAAATAAGTA
CCGCAGGATAAAAAAAATAGTTATTGGACAATTTTCTATTATACTCCGTA
ATTAATAATTTCTACTTCCTCCATGACTTGAATATGTCCTTCATCGACAC
CCATCCGATCCTATTTAAATACTGTAGACAAGATGCAACAAATTGAGCTC
TCATCCAAGCTCATCGGGAATTTTGTCTTTGTTTTGTCTGGTGTCCCTGC
ATGGCGATTAGGATTAGGTTAATGTAAGTCTACAGTATGATAGTCTATAA
CGGTGGGGTGGGCTTCTCTCCGGTACCAGGTATTATACTGCCTGTTGACC
CAATGTTACCACCATCGGGGAAACCGTTAAAGTGCCACGAAGAGGCTTTC
TTTGTCTTTGCGGCCTATGATCCCACCTAAACGTTATCTTTTTAATAGCA
TTTTTCCCCCTGACTGGAGGATGATGATGCTCAGAAGGGTCTAGATGCGT
TCGGATCTTTTTTTAAACAACTATTAATAGACTATTAATAACCCCTTTCT
TCTCTACTAGACTATTATCTTAGTACTATAATACTGTACTTCTCCGTACA
GTACTTGTATACTGTATACTGTATACTATTAATACAGCTAAACGTTATAT
TAATATTAATAGCTGGACGACCCGAACCCTTACCTTGGGATAGAAGCGTA
GACTAAATAATTACCCATTATAATCATAATATCGTACCATCTCCGATACT
TTCAATATGCTACAACTATTAATGTAACCACTTCATACCAATAGTAGAGG
GTGTGGGCAAAGAGAGACGCACATCAATTGGCCCATGGTGGCCTGCAAAG
GCAGTACCCTTTGCTGGAACTACCTTGAGGACTACTGGTCCTGTGTCGGC
GGACTCTGCAGTGAACGCCATCGGTATTCGGTACCTGGTATGCAATAGCG
TGACCGGATAAACTCGGGACTGACCCGATGGCGTGTGGCGGTTTGGTTGC
TGGTTTTGTTGTTGTTGCTGTTGTTGTTGTTGTTGTTTTTTAATCACACT
TATAGCCTGGACCTCTAATTGCCATCCTGCCTGTGGTCACAAAGGATCTT
CCCATCTCTCCCCGGTTCACGCATTATAATTTTTATCGCGATGCAAATTC
AGCACTCTTACAACTCGTCAACCAATGGTTGAATTTTACTTACTCACGTT
CCCACGCTTTCCGTTACGGAAGAAAGAACACAAATTCTGATTAAGCTAAG
AATCGAACTCACGACTTCCGCACTAGCAGGTATGCAGGTTACCTACTAGA
CCACTCGGGCGACGAATGCTGGTATAGATAAATCAATGCATGGACGCCGC
TGCGGAAATCGGGAGGAATCCCGTGGGTGAGTAAGCGCCAGATTCAGCCT
GAGTGTGGATAACAAACAGACTGACGCCGTACAGGGCGGCCGAACCCGTC
TCGCGAGACCAACTCTCAGGCGCGAGCGGTTACAGGGAAATGAGCATTTT
TCCCTATTCAGCTGACCACGATCAGGATTGGTAACCTTACGCGATTGATC
TACACTCTGCTCCATGTGATGGCATGCACGGGCCTGGGAAACAGAGCCGC
TGAAAGATGAAATCGTCAACCGGGCGTCCGATTTCAGGACGGCAGAAGAG
CCATCATCTGGGCGACTTGAAAATGAAATTGGTGGTGTAGTGAAGCTATG
ATGCCGAAGGAGACAACCTGCCAGCACCTGCCACCCAGAGCACCTGACAC
CCGGCGGTGTCTTCAGAACCGGATGGATAGAAAACATACTTTGTCGGAAT
GCCTGGTCACATAGCAGCGCCTTGGCACGGAGCATTCAACGCCACACACT
TCGCCGAGATTGTGACAATCACAACCCAATCTCGTGTGAGCCGGTGGTTG
TCAACTATTATAATAGATTAATACCTAGATTAGAATTAATGGTGTCGTTG
ACTCTCGTGATGGTCAGAAAGCACCTATTAATATTGAATAAGGCTATTAA
TATTGAATAAGGCTATTAATACTCGTATTAAACAAGGCTACGGACGGTTC
CTGGAGTGACTGATCTTTCTCTCGTAGCCTTTGCTTGCTTGGGGGATGCT
TGTTGATTGATGCTAACAACTGATGTTCCCAACTATTTAATAAACATTTC
GACACAAATGCCCCTGACGGTTTGGATGCGTTGGTTCAGATTAATTTGTC
ATTAAACAGCAGCAGTAGGGTTAGCTCTAGTGCATGTACGATCGCAACAA
CCACAGCGAATGTAATGACAACTTGATCTGTACCGCCAGTTCTAGAAAAT
GGGGGATCGCTCCTATCGAATGGGATTTAGCTCTCGCATGAAGCTGCGCC
ACTCGTCTCAGGCGCCAAAGTTAGAACTGCTGTGCGGGGACGCGGGCCAT
GTCCATATCCCCGTGCCCCCCGCGCGCGACACACTGCAGCATTCGAACAA
CCCTTAGCTCTAGGAAGAGCCACAAGCACTATCTGGCAGTCGACCAAAAA
CCACAAGATAATAATAAACAGTTTGCCTGCCATCCTTGAAAGGCCCTTCA
ACTCGCTGAGTGATGGCTCTGTCTGTCACGTTTGCGCCTACTATTAATAA
TATAATAGGTAGTAATAGGTAGGCATCACTGCCGTCACCGCACTATTATA
ACAACAATCATAATGGTGTACTGGTACCTTATATTCAACATTCAACATTT
CACGCGCTTCAAGTCGAGCTCACGTCCTCGCATCGCCTCCACCGGTTGCT
GCCCGCGCACCCGATGTTGTTTCTCACCCCGGCTCGCGTGCGCAGCGGTG
GTTCGCTGGGTCACCGCCCCGTTGGACGTGGCGAAAATCAGGTACGACAG
CAGCCGTACGGCAAGGATTTGCTCATCTCATGTGGTACAGCAGCCGCACA
CATTGCCTGATTGATGTCTTGACACAAAACTCGAAACTGTTCGTTGATAT
GCTGTTTTTAAGAAGAGACTCTGCAACGCGTCGCGGCGCCGCTGCATGCA
TCGTATCGGTAGTGCTTACAGGCAGCGGGCCGGTGCATGCGGAACCGGTT
GATGGTAATCGGTCGGGACGTCGTGTCCCCGCGGGGGCAGTCTATCCGTG
GACGCTAGTGTGCCCTGTACGAGGCTACCTCTTGCTGACGTCAGCCGAAC
AGTTCTAGACGCTAAAATGGGCAAGACGCACTCGATGTTGTTAAATAATC
TCAGGGGAATCGTAAACACATCTAATTAATGCGTGTGTCCAACTTTTCGA
CCCAACTCGGGAAGGTTGCCTCTTTTATCACCTTTTTTATGAAAAAGTAA
GGACGGACGAGACGTTCCAAACTCCCACCCCCCTTAACATTAACATCATC
ATTAACATTAACCTTAACATTAACAGCGATTAGACTACAATAGGCAATGG
CGCTGGCAGCCCCGGGTTTTATCTGCCGAACAACGTTGCTCTATTGAATC
AAAAAGTACCACAAACCTGGTGTCAAATATGAGTATAAAACATTTCGGGA
ATGGAAATGTCTAGCTCTATCCGCCCGTCCACCTTTTCTCGATTACGGAG
GGACACCGCAGGCAAAAAAAAAATCAAGCTTAAAGCCTGTCTACCTCGAT
AGTGGATAGCGCCTATACTTTTCAGCTTTATTTTGTGCCGTGTTACAAAG
GATGCTGTAACTATAACTGGATGAGTGCGGCGAAAATTGAACGAGGACAC
AAGTAAAACTACCCCCTCGGGGGGGGGGGCGGGGGGGGGGTTATGTGTTG
TACCCTGTTATGCACGTGAAGTACCATCGCCGTCGTTTTTCCATTATGTT
CCCTCGGTGGGTGCCACGCAAGATTTCAGCTGGATTATGGCGCCACTCCG
CGCTACGGGAGCCTGTTGGAGACGATGCGCAGCATCTACGCGGAGGAGGG
TCTGGTCAGCCTCTGGAGGTGAGGTAGACGCGCGAGCTGAGGGATGACGC
GTTTGGAAAGTCGCTTGGCGTCACTCGTAGGCTGGACTGCGACGATCACT
AGCTTTGAAAATGTACTTGACTTCCCTCCGTGAAGAGCGCTTGTGCGCGC
GTTGGAGATCCATGCTTCCGAATTCGAACGCCCTTTCGAGCATCACGACG
AGTCTTCCCCTTCAACGCAAGCCCAGTCCGACATTCAAAGCTTTGCCCGG
CATTTAGCAGATTTACTTTCGACTTAAACAGTCAGGATGCAATCCCAGGT
CAAAAGGAAACGAAAGCACGCCGTCTTTCCCCCCCCCCCCTACTCCGGTC
GTGCAACGGATACTCTGGGCGCGTAAAAAATCACCTAGGGGTAACGTCCC
GGCGATCTACCTGTGGGCAACCTTCGGGGGAGTTCAGTTCGGCATGTACG
AACATCTCCAGAGAGTCGACTTCCTGCGCGCAAATGCGGTGTCGCGTACA
CGAGATCGGGGCAGGGCGCACGAAAGATATCGCGACGGTCGGGAGTCTGA
TGGACGCGGCGGCCGTGCGAGAGGGGTATGGGACGAAGACGGGGATCGGG
CCTCGGGCGGATTACCGACGGCGGTGTCAAACTTCGTGTACGGAGCGGTC
GCTGGTTGCACGGCGACCGTCGCTTCGTACCCTTTCGACATCACCCGCAC
AGCGCTCGCGTCCCAGGTGAGGATCTCGGAGAAGGGTGGATTTCAGAGGA
GAGTGAACGGAACTTTCCGATGTCTTTAACCATTCAGCGTCGCGCGGGGA
CGTCGGAGGGAAGTCAACCACAGCGCCTCGGTAGGGGCCGAAGATATCGT
GCCGCCCTATGAGCGAGGGGATCTGCACCCTTGTCCCCGTCTTCCTTTCC
TCCGCAAGCCTCTCGCTACACTTTTTAGGCCGGTCCTTGCCTTCCATGCG
TGCGACACCGCGTAATCGTTACTAACCGCCCGCCGCATGGCCTCGGGCGT
GTGTTGCATGTTCTGAAACAGGGAGTTCCAAAACGTTACACGGGCGTTAC
TGCGTTCTTGACCCACACTGTGCGCGAGGCCGGTCCACGGGGTCTCTACC
GAGGTTTATTTCCGGCGATCGCGATGATCGCTCCGCAAGTCGGGGTAGGA
TTTGCCGTGTACGAGGTGATAAAGGGTAACCCACCCACCTGGCTGATGGA
GGACCTTTCCCGAGGCAGTCGTTCAGCGCCTGTGGAATACACGGCTAGCA
CGATGGGGGGCGGGGCGGATAGTGATAGCGGGGGCACCGGTAACATAGGC
AGATTAGGTGGAAGGGAAACGAAAGTGTCAATACGAAGAGCGGGAAGCGA
CATGCGTGACGAACGGCAGTCTCGCCTGGAGAAGATGTGGCCATTGGTGG
CGGGAGCGACCGCCGGGATGACGAGTAAGCTCGTCGTTTTCCCGCTCGAC
ACGATCAAGAAACGGTTGCAAGCGCAGGTTTGTGTGCGTGAGCACGCGCG
CGCGTGTGTGTGTGTGTATGTGTCGGTGTGTGAAGACAGAAATGGACGAA
CGCTTTAAAAGTACCCCGCGCTTGAAATAACATTGGTATCATTAGTTTAG
ATGGACACGAAGAGGGCAAGGAAACTCCTAACAGGTACGTTCTACGAGAG
ATCGCCGACGCACAGCTGCTTCCGTTGCTTTTCCTGTTGCGAGAGATCTA
GCGTGTGCCTGGTGCATAGCCTCACGCCACCCTCTCCGCTCGCCCGAGAA
CGTCACCTCAAACCCAGTGTTCCACAACCTAGTATTCGCAGGAAGCTCGT
CCTGCAACGAAATCGAAACCAGTCATTTTTGCGCCGGCTGTTAACCCCCC
TCCCCGTCTTTCCCTATTTACCCCCCCCCTCCCACGGCAATCTGATTTCC
AGGTCATGCTGCAGCGCGACGTGTCTTACGGGATTCTTCCGAAGTACGCC
GGATCCATGGACGCCCTGAGGACGATTTTACGGCAAGAAGGGCCACCGGC
GCTGTTCAGGGGGAGCATGCCCGCTATTTTGAAGTCAGGGCTGGCGACCG
GGTTGACGTTCGTAGTTTTCGAGTGGTTCAGGGCGATGAAGACTGACTGA
CTCGCGGGCGTCCTTTATATCCATCCCTCACTCTCCCCAGTCTCGTACGG
CCTGTCGTCTTAACGGCGTGTCGTCATAACGGCGTGTCGTCTTAACGACC
TCTCGTGTTAACGATCTGTCGTCTCAACGACTTGTCGCCTGCATTGTCTT
TAGGGAGTCATGTTCGCATAGCTTAAATTTTTAGGAACACACGATAAACT
GCGGGGCCGCTTGTGTATAGCCCGTCAAGTTTACGCCCGGGGCGATGCTA
CCAATACCGAGGAGATACAGCACGCCAGGATTGATCCCGGAGATGCTGAT
TTTCTCCTCTTGGTGGGATAACCACAAACCAGATTCGTTTTGTTGTATGA
TTCTGCCGGACAAATGATTGGTCCTGCC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig105:9967..18794+ >mRNA_F-serratus_M_contig105.494.1 ID=mRNA_F-serratus_M_contig105.494.1|Name=mRNA_F-serratus_M_contig105.494.1|organism=Fucus serratus male|type=CDS|length=2466bp|location=Sequence derived from alignment at F-serratus_M_contig105:9967..18794+ (Fucus serratus male) ATGCCTACCGATCAGAGCCGCGATGGGGAAGTTAGGTCGACAAAGTCTAC TATTCATCTATTACTGCCCGAATTCCTGCGGGATGGATTTGCTGGAGCAG CTTCTGGAGATGCCTACCGATCAGAGCCGCGATGGGGAAGTTAGGTCGAC AAAGTCTACTATTCATCTATTACTGCCCGAATTCCTGCGGGATGGATTTG CTGGAGCAGCTTCTGGAGCGGTGGTTCGCTGGGTCACCGCCCCGTTGGAC GTGGCGAAAATCAGCGGTGGTTCGCTGGGTCACCGCCCCGTTGGACGTGG CGAAAATCAGATTTCAGCTGGATTATGGCGCCACTCCGCGCTACGGGAGC CTGTTGGAGACGATGCGCAGCATCTACGCGGAGGAGGGTCTGGTCAGCCT CTGGAGATTTCAGCTGGATTATGGCGCCACTCCGCGCTACGGGAGCCTGT TGGAGACGATGCGCAGCATCTACGCGGAGGAGGGTCTGGTCAGCCTCTGG AGGGGTAACGTCCCGGCGATCTACCTGTGGGCAACCTTCGGGGGAGTTCA GTTCGGCATGTACGAACATCTCCAGAGAGTCGACTTCCTGCGCGCAAATG CGGTGTCGCGTACACGAGATCGGGGCAGGGCGCACGAAAGATATCGCGAC GGTCGGGAGTCTGATGGACGCGGCGGCCGTGCGAGAGGGGTATGGGACGA AGACGGGGATCGGGCCTCGGGCGGATTACCGACGGCGGTGTCAAACTTCG TGTACGGAGCGGTCGCTGGTTGCACGGCGACCGTCGCTTCGTACCCTTTC GACATCACCCGCACAGCGCTCGCGTCCCAGGGGTAACGTCCCGGCGATCT ACCTGTGGGCAACCTTCGGGGGAGTTCAGTTCGGCATGTACGAACATCTC CAGAGAGTCGACTTCCTGCGCGCAAATGCGGTGTCGCGTACACGAGATCG GGGCAGGGCGCACGAAAGATATCGCGACGGTCGGGAGTCTGATGGACGCG GCGGCCGTGCGAGAGGGGTATGGGACGAAGACGGGGATCGGGCCTCGGGC GGATTACCGACGGCGGTGTCAAACTTCGTGTACGGAGCGGTCGCTGGTTG CACGGCGACCGTCGCTTCGTACCCTTTCGACATCACCCGCACAGCGCTCG CGTCCCAGGGAGTTCCAAAACGTTACACGGGCGTTACTGCGTTCTTGACC CACACTGTGCGCGAGGCCGGTCCACGGGGTCTCTACCGAGGTTTATTTCC GGCGATCGCGATGATCGCTCCGCAAGTCGGGGTAGGATTTGCCGTGTACG AGGTGATAAAGGGTAACCCACCCACCTGGCTGATGGAGGACCTTTCCCGA GGCAGTCGTTCAGCGCCTGTGGAATACACGGCTAGCACGATGGGGGGCGG GGCGGATAGTGATAGCGGGGGCACCGGTAACATAGGCAGATTAGGTGGAA GGGAAACGAAAGTGTCAATACGAAGAGCGGGAAGCGACATGCGTGACGAA CGGCAGTCTCGCCTGGAGAAGATGTGGCCATTGGTGGCGGGAGCGACCGC CGGGATGACGAGTAAGCTCGTCGTTTTCCCGCTCGACACGATCAAGAAAC GGTTGCAAGCGCAGGGAGTTCCAAAACGTTACACGGGCGTTACTGCGTTC TTGACCCACACTGTGCGCGAGGCCGGTCCACGGGGTCTCTACCGAGGTTT ATTTCCGGCGATCGCGATGATCGCTCCGCAAGTCGGGGTAGGATTTGCCG TGTACGAGGTGATAAAGGGTAACCCACCCACCTGGCTGATGGAGGACCTT TCCCGAGGCAGTCGTTCAGCGCCTGTGGAATACACGGCTAGCACGATGGG GGGCGGGGCGGATAGTGATAGCGGGGGCACCGGTAACATAGGCAGATTAG GTGGAAGGGAAACGAAAGTGTCAATACGAAGAGCGGGAAGCGACATGCGT GACGAACGGCAGTCTCGCCTGGAGAAGATGTGGCCATTGGTGGCGGGAGC GACCGCCGGGATGACGAGTAAGCTCGTCGTTTTCCCGCTCGACACGATCA AGAAACGGTTGCAAGCGCAGGTCATGCTGCAGCGCGACGTGTCTTACGGG ATTCTTCCGAAGTACGCCGGATCCATGGACGCCCTGAGGACGATTTTACG GCAAGAAGGGCCACCGGCGCTGTTCAGGGGGAGCATGCCCGCTATTTTGA AGTCAGGGCTGGCGACCGGGTTGACGTTCGTAGTTTTCGAGTGGTTCAGG GCGATGAAGACTGACTGAGTCATGCTGCAGCGCGACGTGTCTTACGGGAT TCTTCCGAAGTACGCCGGATCCATGGACGCCCTGAGGACGATTTTACGGC AAGAAGGGCCACCGGCGCTGTTCAGGGGGAGCATGCCCGCTATTTTGAAG TCAGGGCTGGCGACCGGGTTGACGTTCGTAGTTTTCGAGTGGTTCAGGGC GATGAAGACTGACTGA back to top
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