mRNA_F-serratus_M_contig1044.450.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1044.450.1 vs. uniprot
Match: UPI001E43DD08 (hypothetical protein n=2 Tax=Roseiconus lacunae TaxID=2605694 RepID=UPI001E43DD08) HSP 1 Score: 100 bits (249), Expect = 1.100e-23 Identity = 56/133 (42.11%), Postives = 81/133 (60.90%), Query Frame = 1
Query: 1 IYADNFFDLFLNGELVSSDT-RFLPHTAFQPTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSNSEWKCRTVFYGPINPE----HVTRAA----WMYIDYDDSHWDQAIEFPEVTV 369
+YADN+F+L++NGEL + D+ RF+PH ++ + P + +AV +DNAD T LEY +GDGGF + + D V+ WK ++VF+GPIN + V R+ WM +D+DDS W A EF E TV
Sbjct: 55 VYADNWFELYINGELTAVDSIRFMPHNVV--SVDVFPKYPMTIAVMAKDNADAKTALEYNHTQIGDGGFILK-MGDGTVTGKHWKAKSVFHGPINRDMRNPQVRRSDIPENWMTVDFDDSEWSAACEFSEQTV 184
BLAST of mRNA_F-serratus_M_contig1044.450.1 vs. uniprot
Match: A0A5C6AVH0_9BACT (Uncharacterized protein n=1 Tax=Rhodopirellula pilleata TaxID=2714738 RepID=A0A5C6AVH0_9BACT) HSP 1 Score: 99.4 bits (246), Expect = 3.410e-23 Identity = 56/135 (41.48%), Postives = 83/135 (61.48%), Query Frame = 1
Query: 1 IYADNFFDLFLNGELVSSDT-RFLPHTAFQPTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSNSEWKCRTVFYGPI-----NPEHVTRAA----WMYIDYDDSHWDQAIEFPEVTVG 372
+YADN+F L++NGEL++ D+ RF+PH ++ + P + +AV +DNAD T +EY + +GDGGF + + D VS + WK +++F+GPI NP+ V R W +D+DDS W A EF E TVG
Sbjct: 59 VYADNWFSLYINGELIAVDSIRFMPHNVI--SVDVFPSYPMTIAVIAKDNADPITAMEYNNTQIGDGGFILK-MADGTVSGTHWKAKSIFHGPIDRDTRNPK-VRREEMPVNWTAVDFDDSDWQSAKEFDEQTVG 189
BLAST of mRNA_F-serratus_M_contig1044.450.1 vs. uniprot
Match: A0A5B9QMI6_9BACT (Uncharacterized protein n=1 Tax=Roseimaritima ulvae TaxID=980254 RepID=A0A5B9QMI6_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 9.120e-23 Identity = 55/133 (41.35%), Postives = 80/133 (60.15%), Query Frame = 1
Query: 1 IYADNFFDLFLNGELVSSDT-RFLPHTAFQPTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSNSEWKCRTVFYGPI-----NPEHVTRAA---WMYIDYDDSHWDQAIEFPEVTV 369
+YADN+F L++NG+LV+ D+ RF+PH ++ + P + +AV +DNAD T +EY + +GDGGF + + D V+ WK +VF+GPI NP + R WM +D+DDS W A EF E TV
Sbjct: 57 VYADNWFSLYINGQLVAVDSIRFMPHNVI--SVDVFPKYPMTIAVIAKDNADAKTAMEYNNTQIGDGGFILK-MGDGTVTGKHWKALSVFHGPIDRDTKNPRVIHREIPENWMAVDFDDSDWQAAKEFDEKTV 186
BLAST of mRNA_F-serratus_M_contig1044.450.1 vs. uniprot
Match: A0A517NXY6_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium K23_9 TaxID=1930275 RepID=A0A517NXY6_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 9.120e-23 Identity = 57/133 (42.86%), Postives = 79/133 (59.40%), Query Frame = 1
Query: 1 IYADNFFDLFLNGELVSSDT-RFLPHTAFQPTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSNSEWKCRTVFYGPI-----NPE---HVTRAAWMYIDYDDSHWDQAIEFPEVTV 369
+YADN+F L++NGELV+ D+ RF+PH ++ + P + +AV +DNAD TG+EY + +GDGGF + L D VS W+ ++V GPI NP V W +D+DDS WD A EF E TV
Sbjct: 57 VYADNWFSLWINGELVAVDSIRFMPHNVI--SVDVFPEYPMTIAVMAKDNADAKTGMEYNNTQIGDGGFILK-LADGTVSGKHWRAKSVSRGPIDRDTRNPRVENDVVPEGWFEVDFDDSSWDAAKEFSEQTV 186
BLAST of mRNA_F-serratus_M_contig1044.450.1 vs. uniprot
Match: Q7UEA9_RHOBA (Uncharacterized protein n=1 Tax=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) TaxID=243090 RepID=Q7UEA9_RHOBA) HSP 1 Score: 98.2 bits (243), Expect = 9.310e-23 Identity = 55/135 (40.74%), Postives = 82/135 (60.74%), Query Frame = 1
Query: 1 IYADNFFDLFLNGELVSSDT-RFLPHTAFQPTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSNSEWKCRTVFYGPI-----NPEHVTRAA----WMYIDYDDSHWDQAIEFPEVTVG 372
+YADN+F L++NGEL++ D+ RF+PH ++ + P + +AV +DNAD T +EY + +GDGGF + D ++ N WK +++F+GPI NP+ V R W +D+DDS W A EF E TVG
Sbjct: 58 VYADNWFSLYINGELIAVDSIRFMPHNVI--SVDVFPSYPMTIAVIAKDNADPITAMEYNNTQIGDGGFILKMADGTVTGN-HWKAKSIFHGPIDRDTRNPK-VRREEMPENWTAVDFDDSDWQSAKEFDEQTVG 188
BLAST of mRNA_F-serratus_M_contig1044.450.1 vs. uniprot
Match: A0A518J282_9BACT (Uncharacterized protein n=4 Tax=Rosistilla TaxID=2795779 RepID=A0A518J282_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 7.080e-22 Identity = 57/133 (42.86%), Postives = 78/133 (58.65%), Query Frame = 1
Query: 1 IYADNFFDLFLNGELVSSDT-RFLPHTAFQPTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSNSEWKCRTVFYGPI-----NPEHVTRAA---WMYIDYDDSHWDQAIEFPEVTV 369
+YADN+F L++NGELV+ D+ RF+PH ++ + P + LAV +DNAD TG+EY + +GDGGF + L D V+ WK ++V YGPI NP V W ID+DDS W A + E TV
Sbjct: 57 VYADNWFSLYINGELVAVDSIRFMPHNVI--SVDVFPKYPMTLAVIAKDNADAKTGMEYNNTQIGDGGFILK-LADGTVTGPHWKAKSVSYGPIDRDTRNPRVVHEELPENWFAIDFDDSSWQAAKVYDEQTV 186
BLAST of mRNA_F-serratus_M_contig1044.450.1 vs. uniprot
Match: A0A1C3EP84_9PLAN (Uncharacterized protein n=2 Tax=Planctopirus hydrillae TaxID=1841610 RepID=A0A1C3EP84_9PLAN) HSP 1 Score: 94.7 bits (234), Expect = 1.480e-21 Identity = 53/133 (39.85%), Postives = 79/133 (59.40%), Query Frame = 1
Query: 1 IYADNFFDLFLNGELVSSDT-RFLPHTAFQPTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSNSEWKCRTVFYGPINPEHVTRAA--------WMYIDYDDSHWDQAIEFPEVTV 369
+YADN+F L++NGELV+ D+ +F+PH ++ +LP + +AV RDNAD TG+EY + +GD GF + D V+N +WK + +GPIN + W I++DDS+WD A E+PE V
Sbjct: 32 VYADNWFMLYINGELVAVDSIKFIPHNVV--SVDILPSYPMTIAVMARDNADPKTGMEYANTNIGDAGFVLK-FGDGTVTNGKWKAKRYSWGPINRDTRNPRVENLPIPEDWYAINFDDSNWDLAKEYPEDVV 161
BLAST of mRNA_F-serratus_M_contig1044.450.1 vs. uniprot
Match: A0A4P5XZ77_9BACT (Uncharacterized protein n=1 Tax=Planctomycetia bacterium TaxID=2052181 RepID=A0A4P5XZ77_9BACT) HSP 1 Score: 94.0 bits (232), Expect = 4.380e-21 Identity = 53/134 (39.55%), Postives = 78/134 (58.21%), Query Frame = 1
Query: 1 IYADNFFDLFLNGELVSSDT-RFLPHTAFQPTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSNSEWKCRTVFYGPINPEHVTRAA--------WMYIDYDDSHWDQAIEFPEVTVG 372
IYADN+F L++NGELV+ D+ +F+PH ++ +LP + +AV +DNAD TG+EY + +GDGGF + D V+N+ WK + GPIN + W +D+DDS W +A E+ E VG
Sbjct: 52 IYADNWFMLYINGELVAVDSIKFIPHNVI--SVDILPTYPMTIAVMAKDNADPKTGMEYANTNIGDGGFILK-FGDGTVTNANWKAKAFSTGPINRDTKNPRVENIPIPENWYAVDFDDSSWGKAKEYTEEQVG 182
BLAST of mRNA_F-serratus_M_contig1044.450.1 vs. uniprot
Match: A0A518DE21_9BACT (Uncharacterized protein n=1 Tax=Pirellulimonas nuda TaxID=2528009 RepID=A0A518DE21_9BACT) HSP 1 Score: 93.6 bits (231), Expect = 6.280e-21 Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 1
Query: 1 IYADNFFDLFLNGELVSSDT-RFLPHTAFQPTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSNSEWKCRTVFYGPI-----NPEHVTRAA---WMYIDYDDSHWDQAIEFPEVTV 369
+YADN+F L++NGELV+ D+ RF+PH ++ +LP + +AV RDNAD TG+EY + +GD GF + D VSN+ WK + +GP+ NP + A W + +DDS W A EF E V
Sbjct: 46 VYADNWFKLYINGELVAVDSIRFIPHNVV--SVDILPAYPMTIAVMARDNADPETGMEYANTSIGDAGFILK-FGDGTVSNAAWKAKKFSWGPVGADTKNPRVESIAVPKDWYAVGFDDSQWPNAREFTEAQV 175
BLAST of mRNA_F-serratus_M_contig1044.450.1 vs. uniprot
Match: UPI001BB51F0F (Sulfatase-like hydrolase/transferase n=1 Tax=Akkermansiaceae bacterium TaxID=2562705 RepID=UPI001BB51F0F) HSP 1 Score: 95.9 bits (237), Expect = 1.530e-20 Identity = 56/133 (42.11%), Postives = 77/133 (57.89%), Query Frame = 1
Query: 1 IYADNFFDLFLNGELVSSDT-RFLPHTAFQPTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSNSEWKCRTVFYGPINPEHVT---RAA-----WMYIDYDDSHWDQAIEFPEVTV 369
IYADN+F L++NG+LV++D F+PH TL +LP + +AV RDNAD TG+EY + +GDGGF + D V+ + WK + F+GPIN + RA W D+DDS W A EF E +
Sbjct: 44 IYADNWFALYINGQLVATDPIPFIPHNVV--TLDILPEYPMTIAVMARDNADPKTGMEYDNTSIGDGGFILK-FSDGTVTTASWKAKDFFHGPINSDTANPKVRATPIPENWFATDFDDSSWANAKEFTEQEI 173 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1044.450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1044.450.1 >prot_F-serratus_M_contig1044.450.1 ID=prot_F-serratus_M_contig1044.450.1|Name=mRNA_F-serratus_M_contig1044.450.1|organism=Fucus serratus male|type=polypeptide|length=124bp IYADNFFDLFLNGELVSSDTRFLPHTAFQPTLKLLPGDNILAVYLRDNADback to top mRNA from alignment at F-serratus_M_contig1044:103874..104691+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1044.450.1 ID=mRNA_F-serratus_M_contig1044.450.1|Name=mRNA_F-serratus_M_contig1044.450.1|organism=Fucus serratus male|type=mRNA|length=818bp|location=Sequence derived from alignment at F-serratus_M_contig1044:103874..104691+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1044:103874..104691+ >mRNA_F-serratus_M_contig1044.450.1 ID=mRNA_F-serratus_M_contig1044.450.1|Name=mRNA_F-serratus_M_contig1044.450.1|organism=Fucus serratus male|type=CDS|length=744bp|location=Sequence derived from alignment at F-serratus_M_contig1044:103874..104691+ (Fucus serratus male)back to top |