mRNA_F-serratus_M_contig1040.428.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1040.428.1
Unique NamemRNA_F-serratus_M_contig1040.428.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1040.428.1 vs. uniprot
Match: A0A6U5KJH5_9STRA (Palmitoyltransferase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5KJH5_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.780e-57
Identity = 98/200 (49.00%), Postives = 127/200 (63.50%), Query Frame = 3 
Query:  786 PLRSRHCRMCGRCVATFDHHCVAIGTCIGERNHCRFWWFILFQTLSLAVAVHITSSGFQGVAEGEAGTHAISG----WLSRNALALLTSALLWPWLIVAVVLLGTHSWMAASNITSYECLKGSQSLSYLEDTRIFDLPFSEGLVGNLRGFCCSRDGTCWWWSWRRGGKWRPRRWKPPGRVVRDSEDWRSNLWENKYWSCC 1373
            PLR+ HC+ C RCVATFDHHC  IGTCIGERNHCRFWWF+ FQ L     + I +S   G   G+     +      + +   L ++ S  LW  +I A+++  THS+ A SN TS+EC KG   + YL  T+  D+PFS+G+  N+RGFCC RD   W +  R   +W P  WKPPG+VVRDSEDW ++ WENKY+SCC
Sbjct:  224 PLRAHHCKHCDRCVATFDHHCFLIGTCIGERNHCRFWWFLTFQLLGFMTCISILNSRVDGYRGGDDTQEYVKEDRFFFFNDQLLVIVVSIYLWALMITAMIMWVTHSFFAISNYTSFECGKGPAYIDYLAGTKNCDMPFSKGIDANVRGFCCFRD-RAWDFLVRNNERWIPILWKPPGKVVRDSEDWWNHPWENKYYSCC 422
[Close]
BLAST of mRNA_F-serratus_M_contig1040.428.1 vs. uniprot
Match: A0A6G0W546_9STRA (Palmitoyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W546_9STRA)

HSP 1 Score: 194 bits (494), Expect = 9.780e-53
Identity = 94/209 (44.98%), Postives = 126/209 (60.29%), Query Frame = 3 
Query:  753 TTCSYCGG--MQVPLRSRHCRMCGRCVATFDHHCVAIGTCIGERNHCRFWWFILFQTLSLAVAVHITSSGFQGVAEGEAGTHAISGWLSRNALALLTSALLWPWLIVAVVLLGTHSWMAASNITSYECLKGSQSLSYLEDTRIFDLPFSEGLVGNLRGFCCSRDGTCWWWSWRRGGKWRPRRWKPPGRVVRDSEDWRSNLWENKYWSCC 1373
            TT  +C    ++ PLR+ HC  C RCVATFDHHC  IGTCIGE+NHCRFWWF+   ++ +   + I  SG+Q           +S WL+ N+LAL+ +   W +   A  L G H+++  +N T+ E  KG + L+YL  TR  DLPFS G++ NL GFCC R G       RR   W P  WKP G++ R++E+   NLWENKY+SCC
Sbjct:  151 TTMEFCTTCILEPPLRAYHCGYCNRCVATFDHHCFCIGTCIGEKNHCRFWWFLFLTSIEVYTCIGIVHSGYQSAPT-------LSAWLNANSLALVATLFFWCFAFTAYSLFGFHTFLMLTNSTTRELGKGPEKLAYLRGTRECDLPFSNGVLRNLSGFCCIRAGC------RR--PWAPEAWKPVGKIERNAENICDNLWENKYYSCC 344
[Close]
BLAST of mRNA_F-serratus_M_contig1040.428.1 vs. uniprot
Match: A0A485K8G1_9STRA (Palmitoyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K8G1_9STRA)

HSP 1 Score: 185 bits (470), Expect = 4.590e-49
Identity = 96/222 (43.24%), Postives = 121/222 (54.50%), Query Frame = 3 
Query:  759 CSYCGGMQVPLRSRHCRMCGRCVATFDHHCVAIGTCIGERNHCRFWWFILFQTLSLAVAVHITSSGFQGVAEGEAGTHAISGWLSRNALALLTSALLWPWLIVAVVLLGTHS-----------------WMAASNITSYECLKGSQSLSYLEDTRIFDLPFSEGLVGNLRGFCCSRDGTCWWWSWRRGGKWRPRRWKPPGRVVRDSEDWRSNLWENKYWSCC 1373
            C+ C  ++ PLR+ HC  C RCVATFDHHC  IGTC+GERNHCRFWWF+L  ++ +   + I  SGF            I  WL  N +AL+     W +   A  L G HS                 ++  +N T+ E  KG + L+YL  TR  DLPFS GL GNL GFCC R G       R    W P++WKP GR+ R+S+    NLWENKY+SCC
Sbjct:  160 CTTCN-LEPPLRAYHCAFCQRCVATFDHHCFCIGTCVGERNHCRFWWFLLLTSIEIYTCLGIVHSGFHTAPT-------IQVWLKANCMALVGVVFFWCFAFSAYSLFGFHSTFCSWSECLVYANTIVAFLMLTNSTTRELGKGPEKLAYLRGTRECDLPFSNGLCGNLGGFCCVRAGL------RHPKDWTPQQWKPVGRIDRNSDRICDNLWENKYYSCC 367
[Close]
BLAST of mRNA_F-serratus_M_contig1040.428.1 vs. uniprot
Match: A0A024TQD3_9STRA (Palmitoyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQD3_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.620e-43
Identity = 88/219 (40.18%), Postives = 117/219 (53.42%), Query Frame = 3 
Query:  717 GASEGTSRRPDFTTCSYCGGMQVPLRSRHCRMCGRCVATFDHHCVAIGTCIGERNHCRFWWFILFQTLSLAVAVHITSSGFQGVAEGEAGTHAISGWLSRNALALLTSALLWPWLIVAVVLLGTHSWMAASNITSYECLKGSQSLSYLEDTRIFDLPFSEGLVGNLRGFCCSRDGTCWWWSWRRGGKWRPRRWKPPGRVVRDSEDWRSNLWENKYWSCC 1373
            GA   T   P    C+ C  +Q PLR+ HC  C RCVATFD           E+NHCRFWWF+L  +L +   + +  SGF            + GWL  N++AL+     + +   A  L G H+++  +N T+ E  KG  +L+YL  TR  DLPFS GLV NL GFCC R G     +  R   W P  WKP G++ R+S +   NLWEN+Y+SCC
Sbjct:   43 GAPVDTLPAPTMEFCTVCQ-LQPPLRAYHCAFCNRCVATFDXXXXXXXXXXXEKNHCRFWWFLLLTSLEVYSCLGVVHSGFHSATS-------LQGWLQLNSIALVAVLFFYTFAATAYSLCGFHTFLMLTNSTTRELGKGPDNLAYLRGTRECDLPFSNGLVRNLGGFCCLRAGCP---TILRRQPWSPAAWKPVGKIERNSANICDNLWENQYYSCC 250
[Close]
BLAST of mRNA_F-serratus_M_contig1040.428.1 vs. uniprot
Match: A0A5A8D737_CAFRO (Palmitoyltransferase n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D737_CAFRO)

HSP 1 Score: 172 bits (435), Expect = 2.520e-43
Identity = 84/197 (42.64%), Postives = 114/197 (57.87%), Query Frame = 3 
Query:  783 VPLRSRHCRMCGRCVATFDHHCVAIGTCIGERNHCRFWWFILFQTLSLAVAVHITSSGFQGVAEGEAGTHAISGWLSRNALALLTSALLWPWLIVAVVLLGTHSWMAASNITSYECLKGSQSLSYLEDTRIFDLPFSEGLVGNLRGFCCSRDGTCWWWSWRRGGKWRPRRWKPPGRVVRDSEDWRSNLWENKYWSCC 1373
            +P+R+  C++  R V  FDH+C  + T +GERNHCRFWWF+L Q+ ++  A+ IT S FQ            +GW S N      +  LW  L  A  +L  HSW+A +  TSYE  KG + + YL  T++ D PFS+G  GNL+ FCC  D  C       G +WR + W  PGR+VRDS+D   + WEN+YWSCC
Sbjct:  266 LPVRAHFCKVSQRYVHGFDHYCGVLATPVGERNHCRFWWFLLAQSATIGAALGITHSAFQF-------QPTYTGWWSANGGVFALALTLWILLAFAGGMLLLHSWLAITGSTSYELFKGPRRVWYLRHTKMCDYPFSKGPAGNLQAFCCLSDAAC---VALYGRRWRAQAWAVPGRIVRDSDDVIEHCWENRYWSCC 452
[Close]
BLAST of mRNA_F-serratus_M_contig1040.428.1 vs. uniprot
Match: A0A6H5KZD6_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZD6_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 9.750e-43
Identity = 98/193 (50.78%), Postives = 108/193 (55.96%), Query Frame = 3 
Query:  648 PESTGTPPRGQHVGSEDGDNPVPGASEGTSRRPDFTTCSYCGGMQVPLRSRHCRMCGRCVATFDHHCVAIGTCIGERNHCRFWWFILFQTLSLAVAVHITSSGFQ----------GVAEGEAG-------THAISGWLSRNALALLTSALLWPWLIVAVVLLGTHSWMAASNITSYECLKGS----QSLSYLE 1163
            P   G P  G    S      V G  EG+  RPDF  C  C  M+VPLRS HCR CGRCVATFD          GERNHCRFWWF+L QT+SLA A+ IT SGF             A GEAG       T A   W SRNALAL  S  LWP   ++VVLL THSWMA S++TSYECL+G      SL YLE
Sbjct:  140 PVEEGQPTEGNEKSSSINTASVVGGFEGSLTRPDFVRCRRCQDMEVPLRSHHCRACGRCVATFDXXXXXXXXXXGERNHCRFWWFLLAQTVSLAEAIRITMSGFSDDGDRYSFTLSPAVGEAGATTPTESTTAEGSWASRNALALACSCCLWPCFALSVVLLVTHSWMAISSLTSYECLRGGGRGPDSLEYLE 332
[Close]
BLAST of mRNA_F-serratus_M_contig1040.428.1 vs. uniprot
Match: W4GRC4_9STRA (Palmitoyltransferase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GRC4_9STRA)

HSP 1 Score: 160 bits (404), Expect = 5.270e-40
Identity = 85/221 (38.46%), Postives = 116/221 (52.49%), Query Frame = 3 
Query:  720 ASEGTSRRPDFTTCSYCGGMQVPLRSRHCRMCGRCVATFDHHCVAIGTCIGERNHCRFWWFILFQTLSLAVAVHITSSGFQGVAEGEAGTHAISGWLSRNALALLTSALLWPWLIVAVVLLGTHSWMAASNITSYECLKGSQSLSYLEDTRIFDLPFSEGLVGNLRGFCCSRDGTCWWWSWRRG---GKWRPRRWKPPGRVVRDSEDWRSNLWENKYWSCC 1373
            AS   S  P    C+ C  +Q PLR+ HC  C RCVATFD           ERNHCRFWWF+   T+ +   + +  SGF            +  W+  N++AL+ +   + +  +A  L G H+++  +N T+ E  KG   L YL  TR  DLPFS GLV N+ GFCC R G        RG    +W P  WKP G++ R++ +   NLWEN+Y+SCC
Sbjct:  145 ASVELSPAPTMDFCTVCQ-LQPPLRAYHCGFCNRCVATFDXXXXXXXXXXXERNHCRFWWFLALTTVEVYACLGVVHSGFHAATS-------VQAWIQLNSIALVAALFFYTFAAMAYSLCGFHTFIMLTNSTTRELGKGPDKLPYLRGTRECDLPFSNGLVRNVGGFCCFRAGC-------RGMNRHEWTPTDWKPVGKIDRNAANICDNLWENQYYSCC 350
[Close]
BLAST of mRNA_F-serratus_M_contig1040.428.1 vs. uniprot
Match: A0A6T7JK16_9STRA (Palmitoyltransferase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7JK16_9STRA)

HSP 1 Score: 162 bits (410), Expect = 5.570e-40
Identity = 82/198 (41.41%), Postives = 111/198 (56.06%), Query Frame = 3 
Query:  786 PLRSRHCRMCGRCVATFDHHCVAIGTCIGERNHCRFWWFILFQTLSLAVAVHIT-SSGFQGVAEGEAGTHAISGWLSRNALALLTSALLWPWLIVAVVLLGTHSWMAASNITSYECLKGSQSLSYLEDTRIFDLPFSEGLVGNLRGFCCSRDGTCWWWSWRRGG-KWRPRRWKPPGRVVRDSEDWRSNLWENKYWSCC 1373
            PLRS HC++C  CVAT            GERNHCRFWWF+  Q L       I  SS +           +   W+  N + +     L+P  ++ ++L   H++ A +N+T++EC + S+ + YLE T   DLPFS G+  NLR FCC RD      S+  G  +W+P  WKPPG++VRDSEDW  N W+NKYWSCC
Sbjct:  248 PLRSHHCKICDTCVATXXXXXXXXXXXXGERNHCRFWWFLSMQMLGFLECCRIVHSSSYGSFHLFHVSKESNVPWM-HNLIVIAGKLYLYPLTLITIMLWIAHTFFATANMTTFECGRSSKHVDYLEGTIETDLPFSAGVDNNLRMFCCFRDSCL---SFLTGEPQWKPIAWKPPGKIVRDSEDWWENPWQNKYWSCC 441
[Close]
BLAST of mRNA_F-serratus_M_contig1040.428.1 vs. uniprot
Match: A0A1V9Z7K6_9STRA (Zinc finger protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z7K6_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.190e-39
Identity = 86/202 (42.57%), Postives = 110/202 (54.46%), Query Frame = 3 
Query:  753 TTCSYCGGMQVPLRSRHCRMCGRCVATFDHHCVAIGTCIGERNHCRFWWFILFQTLSLAVAVHITSSGFQGVAEGEAGTHAISGWLSRNALALLTSALLWPWLIVAVVLLGTHSWMAASNITSYECLKGSQSLSYLEDTRIFDLPFSEGLVGNLRGFCCSRDGTCWWWSWRRGGKWRPRRWKPPGRVVRDSEDWRSNLWENK 1358
            TT  +C     PLRS HC  C +CVATFDH         GERNHCRFWWFIL   + ++  + I  SGF+   EG      +  WL  N +AL  +   W + ++   L G H+++  +N T+ E  KG + L YL  TR  DLPFS G+ GNLR FCC R G C          W P  WKP G++ RDS++   NLWENK
Sbjct:  137 TTMDFC----TPLRSYHCAYCNKCVATFDHXXXXXXXXXGERNHCRFWWFILLSCIEVSTCLGIIHSGFRS--EGS-----LKLWLKSNGMALAAAMFFWFFALLTYSLCGFHTFLMLTNSTTRELGKGPEKLKYLHGTRECDLPFSHGVCGNLRAFCCLRPGWC-------KADWAPHTWKPVGKIDRDSDNIWDNLWENK 320
[Close]
BLAST of mRNA_F-serratus_M_contig1040.428.1 vs. uniprot
Match: A0A1W0A230_9STRA (Palmitoyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A230_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.030e-37
Identity = 80/205 (39.02%), Postives = 105/205 (51.22%), Query Frame = 3 
Query:  759 CSYCGGMQVPLRSRHCRMCGRCVATFDHHCVAIGTCIGERNHCRFWWFILFQTLSLAVAVHITSSGFQGVAEGEAGTHAISGWLSRNALALLTSALLWPWLIVAVVLLGTHSWMAASNITSYECLKGSQSLSYLEDTRIFDLPFSEGLVGNLRGFCCSRDGTCWWWSWRRGGKWRPRRWKPPGRVVRDSEDWRSNLWENKYWSCC 1373
            CS C  +Q PLR+ HC  C +CVATF                 RFW FI    + +A+ + I  SGF+  +        +  WL  N +AL  +   W +  +   L G H+++  +N T+ E  KG   L YL+ TR  DLPFS GL GNLR  CC   G C         KW PR WKP G++ R+SE+   NLWENKY+SCC
Sbjct:  144 CSVCS-LQPPLRAYHCSYCNKCVATFXXXXXXXXXXXXXXXXGRFWLFIFLSCIEVAMCLSIVHSGFRAEST-------LKIWLKHNGMALAAAMFFWFFAFLTFSLFGFHTFLLLTNTTTRELGKGPDELKYLQGTRECDLPFSNGLCGNLRNVCCIHPGWC-------SNKWTPRVWKPVGKINRESENICENLWENKYYSCC 333
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1040.428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6U5KJH5_9STRA2.780e-5749.00Palmitoyltransferase n=1 Tax=Corethron hystrix Tax... [more]
A0A6G0W546_9STRA9.780e-5344.98Palmitoyltransferase n=1 Tax=Aphanomyces euteiches... [more]
A0A485K8G1_9STRA4.590e-4943.24Palmitoyltransferase n=1 Tax=Aphanomyces stellatus... [more]
A0A024TQD3_9STRA1.620e-4340.18Palmitoyltransferase n=1 Tax=Aphanomyces invadans ... [more]
A0A5A8D737_CAFRO2.520e-4342.64Palmitoyltransferase n=1 Tax=Cafeteria roenbergens... [more]
A0A6H5KZD6_9PHAE9.750e-4350.78Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
W4GRC4_9STRA5.270e-4038.46Palmitoyltransferase n=1 Tax=Aphanomyces astaci Ta... [more]
A0A6T7JK16_9STRA5.570e-4041.41Palmitoyltransferase n=1 Tax=Attheya septentrional... [more]
A0A1V9Z7K6_9STRA1.190e-3942.57Zinc finger protein n=1 Tax=Achlya hypogyna TaxID=... [more]
A0A1W0A230_9STRA2.030e-3739.02Palmitoyltransferase n=1 Tax=Thraustotheca clavata... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1040contigF-serratus_M_contig1040:181775..196790 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score163.3
Seed ortholog evalue1.2e-37
Seed eggNOG ortholog157072.XP_008875030.1
KEGG koko:K18932
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.protein-cysteine S-palmitoyltransferase activity
EggNOG OGsCOG5273@1,KOG1311@2759
EC2.3.1.225
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons8
Model size2010
Cds size600
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1040.428.1prot_F-serratus_M_contig1040.428.1Fucus serratus malepolypeptideF-serratus_M_contig1040 190456..196156 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928855.5155466-UTR-F-serratus_M_contig1040:181774..1821611622928855.5155466-UTR-F-serratus_M_contig1040:181774..182161Fucus serratus maleUTRF-serratus_M_contig1040 181775..182161 +
1690962602.6059759-UTR-F-serratus_M_contig1040:181774..1821611690962602.6059759-UTR-F-serratus_M_contig1040:181774..182161Fucus serratus maleUTRF-serratus_M_contig1040 181775..182161 +
1622928855.5430865-UTR-F-serratus_M_contig1040:182301..1824591622928855.5430865-UTR-F-serratus_M_contig1040:182301..182459Fucus serratus maleUTRF-serratus_M_contig1040 182302..182459 +
1690962602.618685-UTR-F-serratus_M_contig1040:182301..1824591690962602.618685-UTR-F-serratus_M_contig1040:182301..182459Fucus serratus maleUTRF-serratus_M_contig1040 182302..182459 +
1622928855.5605934-UTR-F-serratus_M_contig1040:185961..1861311622928855.5605934-UTR-F-serratus_M_contig1040:185961..186131Fucus serratus maleUTRF-serratus_M_contig1040 185962..186131 +
1690962602.626837-UTR-F-serratus_M_contig1040:185961..1861311690962602.626837-UTR-F-serratus_M_contig1040:185961..186131Fucus serratus maleUTRF-serratus_M_contig1040 185962..186131 +
1622928855.5725663-UTR-F-serratus_M_contig1040:190394..1904551622928855.5725663-UTR-F-serratus_M_contig1040:190394..190455Fucus serratus maleUTRF-serratus_M_contig1040 190395..190455 +
1690962602.6351058-UTR-F-serratus_M_contig1040:190394..1904551690962602.6351058-UTR-F-serratus_M_contig1040:190394..190455Fucus serratus maleUTRF-serratus_M_contig1040 190395..190455 +
1622928855.6451652-UTR-F-serratus_M_contig1040:196156..1967901622928855.6451652-UTR-F-serratus_M_contig1040:196156..196790Fucus serratus maleUTRF-serratus_M_contig1040 196157..196790 +
1690962602.689012-UTR-F-serratus_M_contig1040:196156..1967901690962602.689012-UTR-F-serratus_M_contig1040:196156..196790Fucus serratus maleUTRF-serratus_M_contig1040 196157..196790 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928855.5844674-CDS-F-serratus_M_contig1040:190455..1904611622928855.5844674-CDS-F-serratus_M_contig1040:190455..190461Fucus serratus maleCDSF-serratus_M_contig1040 190456..190461 +
1690962602.6435864-CDS-F-serratus_M_contig1040:190455..1904611690962602.6435864-CDS-F-serratus_M_contig1040:190455..190461Fucus serratus maleCDSF-serratus_M_contig1040 190456..190461 +
1622928855.5960712-CDS-F-serratus_M_contig1040:191533..1916491622928855.5960712-CDS-F-serratus_M_contig1040:191533..191649Fucus serratus maleCDSF-serratus_M_contig1040 191534..191649 +
1690962602.652399-CDS-F-serratus_M_contig1040:191533..1916491690962602.652399-CDS-F-serratus_M_contig1040:191533..191649Fucus serratus maleCDSF-serratus_M_contig1040 191534..191649 +
1622928855.613941-CDS-F-serratus_M_contig1040:192968..1930331622928855.613941-CDS-F-serratus_M_contig1040:192968..193033Fucus serratus maleCDSF-serratus_M_contig1040 192969..193033 +
1690962602.6619637-CDS-F-serratus_M_contig1040:192968..1930331690962602.6619637-CDS-F-serratus_M_contig1040:192968..193033Fucus serratus maleCDSF-serratus_M_contig1040 192969..193033 +
1622928855.6252441-CDS-F-serratus_M_contig1040:194806..1950061622928855.6252441-CDS-F-serratus_M_contig1040:194806..195006Fucus serratus maleCDSF-serratus_M_contig1040 194807..195006 +
1690962602.67113-CDS-F-serratus_M_contig1040:194806..1950061690962602.67113-CDS-F-serratus_M_contig1040:194806..195006Fucus serratus maleCDSF-serratus_M_contig1040 194807..195006 +
1622928855.6354518-CDS-F-serratus_M_contig1040:195943..1961561622928855.6354518-CDS-F-serratus_M_contig1040:195943..196156Fucus serratus maleCDSF-serratus_M_contig1040 195944..196156 +
1690962602.6800249-CDS-F-serratus_M_contig1040:195943..1961561690962602.6800249-CDS-F-serratus_M_contig1040:195943..196156Fucus serratus maleCDSF-serratus_M_contig1040 195944..196156 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1040.428.1

>prot_F-serratus_M_contig1040.428.1 ID=prot_F-serratus_M_contig1040.428.1|Name=mRNA_F-serratus_M_contig1040.428.1|organism=Fucus serratus male|type=polypeptide|length=200bp
MQVPLRSRHCRMCGRCVATFDHHCVAIGTCIGERNHCRFWWFILFQTLSL
AVAVHITSSGFQGVAEGEAGTHAISGWLSRNALALLTSALLWPWLIVAVV
LLGTHSWMAASNITSYECLKGSQSLSYLEDTRIFDLPFSEGLVGNLRGFC
CSRDGTCWWWSWRRGGKWRPRRWKPPGRVVRDSEDWRSNLWENKYWSCC*
back to top

mRNA from alignment at F-serratus_M_contig1040:181775..196790+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1040.428.1 ID=mRNA_F-serratus_M_contig1040.428.1|Name=mRNA_F-serratus_M_contig1040.428.1|organism=Fucus serratus male|type=mRNA|length=15016bp|location=Sequence derived from alignment at F-serratus_M_contig1040:181775..196790+ (Fucus serratus male)
GTATGTATGTATGTATGGTCATCACTTATAGCAGCGTATGGATCAACCGG
GTAAGTTTGCCAATCCTGCTCGTGGTCAGCTGAACAGGGAAAATGAGCAT
TCCCCTGTCCCCGTACGTGCCTGAGAGTTTGGTCTCTCGCGAGACGGGTT
CAGCCGTCCCGTCCCGCGTCAGCCTGCTCGTTCTCCATACTCAGGCTGAA
TGAAAACCTGTGATCAGACGTGTGTGTGCGCGCGTTTGAGCTCATAGCGT
TCATTTGCTCGAGTTTTCCTCGATACCACGCGAACAGGGATCCGACCCGG
GGTACTTGCTCGAGGGTGTTCTAGGAGAGGCGGAAGGCGATTCCGAATGT
GCTGCAGGAAGCTCGCGTGCTTCGGCGCCGGAGTCAAGTGAGAAACAGCA
GTAGCAGTAGCACTCCATGATACCACTATCATAGTTCGCCGGAACTGACC
GGTTCGTATTCCTTACCATACTACCCCCGTCTGGCGCACGGTTGCTCCCG
CTTGACACCCTCCCTCCTGTATGGCAGGGACAAGATATCGACGTGTTGCG
GCACACCAAGAGAGCAAGGACGCCGGTCCTGGATGGGCGTTCGTAGACCC
TGAGTGGGCTTCTCTGGGAGGGGGAGGCGGCGGACCCTCTGCGCCCGAGG
CGGATGCTCTGGGCACCGAAGGAACGGAGGGCGAGGTGTGTGTGTAGAGT
AGTGTTGTTTTGTTTTTTTGTTGATGGTTGCCTTGGACGCCAAAGTTATG
TTGCTGTGCTGTGTGGTGGGTGACCGTATTGTGTCGATTTAGGGGGTGGG
CGTGGGGGGTTTTCCCGAGGGAATCGTAATCGTAAGGGGCAGAAGTCAAC
TACGCCTCATGCAGCGGTCCCTTCGCGAGACGATAAAATTTACAAAATAA
TTAATGCAGCAGGCGTTACAACCGGTGAGGTACCGACTCCACATTTTTGC
TGTTTTGTTTTTTATTTTTATTTTTTGGGAGGGGGAGAGATTCTTCTCTT
TGAAAAACAACGAACCAATCGGAAGACAAGAAAGTTCGGCTATTATTATG
GGGAGGCGTGGGTTTGTTATAGAATGATATGATTTTACAACAGAGTCAGA
TCAACATTCGAAATACGTATATATATGTATGGTCATCACATATAGCAGAG
TATGGAGCAACCGTGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACA
GGGAAAATGAATATTCCCCTGTCCCCGTGCGTGCCTGAGAATTTGGTCTC
GCGAAACGGGTTCAGCCGTCCCGTCCCGCGTCAGCCTGCTCATTCTCCAT
ACCCAGGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCG
GCGGCGTCCATTTATGAAACCGCCATACGCCATCGGGTCAGTCCCGAGTT
TATCGGGTCACGCAAGAGCGTACCGACGGCGTTCACTGCCGAAAGTCCAC
TGGCACAGGGCCAGTAAACTTCAAGATAGTTTCGAACGGGTGCTGCCTTG
GCAGGTCACCATGGACCAATTAATATGCGCCTCTCTTTCCCACACCCACT
ATTGGTATGAAGTGGGCATGTGGAAAGTACCTATATATACGTAATGCGTG
GGACCGAAATTTTGTAAACCAAAAATAAGTTTTGATTTTCTCTCGGGGGA
CAGAAATACGAAATACCCTCCCCCCCCCTGTTCCCTTTCACGAATTCCTT
CAATTCCTTCAATTCCTTTTTTTTTCTTTACGATCGTGTTTTTTTTTTGT
AAATCTGTGATACGGAACTACTTGTGTAAAAAGCATTAACTCGCCTACTA
GAGCCTATACTGGGGTATACCTGTATAATAAGTACCAGTACTGCATTTCG
TGTAGCCAGTTCGTGGAGTCGAAAATGACTCCAGACCATTTGCTGGTTTG
CCGTTGGTAAATGGTAAAGTTCTATACAGGTTTTATAGGGATACATTAGG
CGGTAAGAGAGGGGGGAGAAATCAATGTCCCTGTCCATCTAGTTATTGTT
TTTTTTAATATAGATGATCATGTCAAGATTGAAAGTAAGTAATTCGCTCA
AGGGGAAGATGGTTCTCTCCCCCAATCTTTTCCTCGGGAAGATGCAGAGA
CTAATCAAATAAAAAATAAATAAAGCATTTTTTTTTAGTGTAGCACCAAG
TACACCCGATCGCTTCATGACGTGTCCATTCTTTTTGATGATCTATCAGC
GCGGGGGATACTCGTACGAATCTGTGCGGGCCAGCCGTAACATTTACACA
TAACACGCCCCGCTTGGCCGTGGGTGTACGGGACCGTAGTGTACTGTAGC
ATAGAGCTTGACTCCCTTGTGTTGTATATAGTGTAGTGTGTACCTGTAGC
ATAGCGTAGTGTACCTGTAGCATAATGTAGTGTACCTGTAGCATAGTGTA
GTGTACCTGTAGCATAGCGTAGTGTGTACCTGTAGCATAGCGTAGTGTGT
AGCGTAGTGTACCTGTAGCATAGTGTAGTGTATCTGTAGCATAGTGTAGC
GTACCTGTAGCATAGTGTAGTGTACCTGTAGCATAGTGTAGTGTACCTGT
AGCATAGTGTTCTGGCCATGTATTAATGTATTAATAGAGCTTGACTCTCT
CGTCATGTATGAAGTGTAGTGTACCTGTAGCATAGGGTGTACCTGTATTG
TGGCGTATAGGGTAGTGTATGTAGTATGGTCATCACACATGTAGCAAGAG
TATGGATCAACCGGGTAAGGTTGCCAATCCTGCTCGTGATCACCTGAACA
GGGAAATGAAGATTTCCATGTCCCTGTTCGCGCCTTAGATTTGGTCTCGC
GAAACGGGTTCAGCCGTCCCGTCCCGCGTTAAGCCCGCTCATCTCCATAC
TCACGCTGAATCTGGTGCTTACTCGCGGGATCCCTCCCGAGTTCCGCAAC
GGCGTCCACATTTACCGTCAACTGACATTGGGTCAGTCCCGAGTTTATCG
GGTCACCCAATTACGTACCGATCGCGTTCACTGCTGAAAGTCCGCCGACG
CAGAGCCAGTAGTCCTCAAGGTGGTTGCAGCAACGGGTTCTGCCATTTTG
AAGGTCACCATGGACCAATTAATGTGCGCCTCTTTTTTCCCACGTCCACT
ATATTATTATTGGTATTATTAGGTTAGTCTATAGCATGTTGTGCGATAGA
GAGAGTATATATCATAGTCTATCATACTCTATCATAGTCTTTTCCCATGT
ACGATGCAGAAAGTACAGTATCGGAGGCGTGTGTGAGGGATACAAGTAAA
CTACTGAGCCACTTCCACGATCAGCGCGAGTGGCTCAGTGGCACCAAGGC
ATAGGTTCGATCCCCGGCTGTCGCGTTTGTTTATTTTTTTATTTTTACAA
GAGTGTGTGTGTGTGTGTGTGTGTGTATCAAGAGATGAGCTCGAATTGTT
TTCCGAGGGAGAAGATGCTATGGCAGTCGGAGAAATAAAACGcCGGCGGA
CAAATTGACGACGACGGGGGGGGGGGCGGACAGTCTTGACTTGTGCCGGT
CGCCACGGTAGTTCAGTTGGTAACCTCGAAACCCTCTGACGTTGGGGCGT
GAGTTCGAATCTCGGCGCAGTCACGCGAACTGGGATTTTTCCTCACGTAA
AAAATGAACCAAGTGGAGAACAATTGGTTCGTGGGTACGCAAAATTCGAC
TTCACGGTGGACGAGGGAAAGTGATGGCTGAATCCTTCTCGCGATAAAAA
TTAAGGCAAACACCGATTAAGGAAGGTGGATGAGAAATCCTGTGTGACCT
TCCTCCTGTGTGACCCCGGCTGGTGCGTCCACAAGTCTGACGTCCAGAAT
AAATGGGGTGATAACACACACATACACCGACTGATGTTAGGCTTTTTGGC
ATCTTTGGGGTTGACGCAGCCTCACAAAATGTCCTTCGCCACTTTAACAG
AGAGTGATACGCTGGATTTCGCGGGCAAGACCCCATGCTACGACAGTTGT
TCACAGCCTCACAAAATTGCTGTGCCTCGCCAGATACGGTTTTCCTCGAA
AAACGGCGTACTCTGATTATTTGCCATTTTGTCAGCAAAATGCCCCAGCA
GTCACACCCATCCGTACACAAAAAACAAAGTCTTCGGGAAAAGCAACCAT
TACCCCTCTTCTTGATATATATAATATATATATATATATGTAATTGTACA
AAACATATCCCCTATCCCCCCTTCTCCCCCCTCCCAGGACAGGGAGACCA
TTTCAACGAGGCTACTGTCGTCACCTCAGGGTGGTGTCAACGGCGTTGCG
AGCGACTATGACGCGACGAGTGTGGCGCGGAAATCCGTTCCCGAGAGCAC
TGGAACTCCTCCGCGCGGGCAGCATGTCGGAAGCGAGGACGGCGACAACC
CGGTGCCGTGAGTTCTCGCGCTGTCTGCTGTGCGTCGGCCAACCCGGACC
TATTGTCTCTTGTCTGTCCGCCGCCTCTAACTTCGCATACAACTCCCATG
AAATAACCTATATTTACAAGTAATATTTTGGTACAGTTAAGTGCTTGTGT
CATACACACCTCCTGACATTCCAGGAGACATGTAGACTCTGTCGGGGGGG
GGGGGGTGTTACTCCTTTCTGTGGGTGAACAAAGATGAAGAGGTTTTGTT
TTTGCAGCCTATGCTCTCACCTAAACGTTTTGACGTTTTCCAcCCTGACT
GGGGAATGCTGGAGGTCAAGATGTGTTGATATTTTTCTTTAAACGCGGGT
TCGGGTTGTCGTCATCTTCGCCCTACTACGGCTGCTTTGGTACATCCACT
ACTGTTCGTTACTTGTTATTTTAGGGTTGAAAGTCTAGCACAACATGTAG
TGGGACATGCAAGTTGTATGTCAGGACAGCAGCATAAAATTATGGTTTAG
TAATACTCAAGTAGTTCAAAGAAAAATCTGAGCGCATCTAGACCTTAAGG
GGGAAAAATAAGTCAAAACGTTTAGGTGGGATCATAGGCTGCAAAAACAA
AACCTCTTCATGGCATTTAATCGGGTTCCCCTATGGTGGTAATATTGGGT
CAACAGTATAATGTCGGGGAGAAACCCACCGTTATACTGTACACTTAGTA
CTGGTATACATTAATCGCCATGCAGAGGGGGATTCAAACAAAATACAGTA
AACATAAGAGACACAATGAGTTTGGATCACAGCTCAATTTGTTACATTGG
ATCTAGGATCGAATGGGTGTCGATGAGGGAAACATTCGAGTCGTGGACGA
TGTAGAAATGATGATGGGTTTTGTTTTAGTTTGTCAGCATATTAGTAAAC
GTACATAATGATGAATAATGCAAGTACGACTGAATAGTCTTATACCAGGG
TAGCATATACGGTATTACATGCTTATATACTTTACCTACATCGTAGAAGT
GCAGCTGGCCAAAGAGGTATGAGAGAAAGTACAGTACCTTCGAGCTTCCG
CTACGGTGGTAGCATATTGACTGGTCCATGGTGACCTGCCAAGGCAGCAC
TCGTTCGGAACTAACTTGATATTTACTGGCCCTGTGCCGGTGGACTCTCG
GCAGTGAACGCCATCGGTACGCAATTGCGTCACCTGATAAACTTGGGACT
GACCCGATGGCGTATGGCGGTTCTAAATATATAAATGGACGCCGCCGCGG
AACTCCGGAGGAATCCCGTAAGTAAGCACCAGATTCAGCCTGTGTATGGA
GATGAACAGGCTAGGGGAACGGGACGGCCGAACCCGTCTCGCGAGACCTA
ATTTTAGGCGCGAACGCGGACAAGGAAAATTTTCAGCTGACCACGTGCAG
GATCGGCAACCTTACCCGGTTGGTTCATACTCTTGCTATATGTGTGACAA
TACATACATACTGCTATACTTTCAACATGTCCACTTCATACCAATAGTAA
GTGTGAGAAAGAGAGGCGAATATTAATTGATCCATGGTGACCTGCTGAGG
CAGCACTCGTTCGGAACCACCTTGAGGTTTACTGGCCCCGTGCTGGCGGA
CTCTCGGCAGTGAACGCTATCGGTACGCAATTGCGTGACCCGATAAACCC
GGGACTGACCCGATGGCGTATGCCAGTCTAATATAAATGTATGGACGCCG
CCGCGGAGCTCGGGAGGAATCCCGTAAGTAAGCACCAGATTCGGCCTGAG
TATGGAGATGAGCAGGCTGACGCGGGACGGAACTGCCGAACCCGTCTCGC
GATACCAAATTTTCAGGCACGAACGCGGACAGGGGAATACTAATTTTCCC
TGTTCAGCTGACCACGAGCAGGATTGGCAGCCTTACCCGGTTGATCCATA
CTCTTGCTATATGTGTGACCATACATACATATATACATACATACATACAT
ATATACTTTACCTACATCGTAGAAATGCAGCTGACTAGAGAGGCATGGAA
GAAAGTACAGTACCTTCGAGCTTCCGGTACGGCTGTAGCTGTGAGAAACG
GCAACGTCCGTCGAGTCCTTGGTGGCCACATACTGCAACTGTAGGGGTTG
TTCGGTAGGTGGCACACAGGATATTCGAATATTATCTGATACAGTCTAAA
TACAGTATCGTAACAGTTTTATTATTTAGCACTTCGTACTCCGGGGTCTA
TGATATATTGGCATATTTCGTAGCATGAAGTGCATACCAATGGTGGGTAT
GGGAAAGAGAGGCACATATTAATTGGTCCATGGTGACCTGCCAAGGCAGC
ACCCGTTTGGAACCACCTTGAGGTTAACTGGCCCTGTGCGGGCGGACTCT
CGGCGGTGAAGGCATCGGTACGCAATTGCTGACCCGTAAGCGTTCAGATT
TTTTTTTAACTCGATAAAGACCCAATGGCGTATTGCAGCTCAAATAGATA
AATAAACGCCGCAGCAGAGCTCGGGAGGAATCCCGTAAGCACCAGATTCA
GCCTGAGTATGGAGATGAGCAGGCTGGTGCGGAACGGGACTGCCGAACCC
GTCTCGCGAGACCAACTTCTTAGGCGCGAACGGGGACAGGGAAATATCCA
TTTTCCCTGTTCAGCTGACCACGAGCAGGGTTGGAAACCTTACCCGGTTG
ATGCATACTCTCGCTATATGTGTGACCATACATACATGTACTCGCACGTA
GCAGTAGTGATAGTTTTGTACTTATTATACAGTACTATACAGTATTATAT
AGTATTACACAGTGTGTCTGTTTTCTTCCCATTTATTCTGACATCAAGTT
CGTTGGACGTACCAGCTGGGGTCACGCAGGAGGAAGGTCACACAGGATTT
CTCATCCACCTTCCTTCTGCGGTGCGTGCCTTCATTTTTCTCGCGAGAAA
GATTCAGCCATTTCTTTCCCTCGTCGACCGTGAAGTCGAAGTTTGTGTAC
TAACAATTTTTAATCGTTCTCCACTCGTTGGGCATTTTTATTTTGTTTTT
AGCTTTAAGTGAGAAAATCCCGTTTGCGGGGATCGAACTCACGTCCCAAC
GTGTCATAAGGTAACGTGGTTACCTCTGAGCTACCGTATTATACAGAATT
ATACCAGTATAGTATTATACAGTATTATATAGTATTACACAGCATTATAT
AGTATTATACAGCATTATATAGTATTATACAGTATTATACAGTAATATAT
ACCGTAGTATTATACAGTATTATACTTCGAAGTATAATATTATACAGCAT
TATATAGTACTATACATCATTATATAGTATTATACAGCATTATATTGTAT
TATACAATATTATATAGTACCTGGTTTCTATACTGTATTTTTTCTTTTTT
TCTTTTTTTAATCACACTTACAGCCTATGTACCTCATAATTACCATCCTG
CCTGTGGCCACAAAGGATCTTCCCATCTCTCCCCGGTTCACGCCTTACAA
TTTTTATCGCGATACAAGTTCAGCACTCTTACAACTCGACAACCAATGGT
TAAATTTGTATAGGAGTACTGTATTATATAGTACCATACAGTATTTTATA
CTGGTAGTATTATACAGTAATATATACTGGTGGTACTTAACTCGCCATTC
GGCCTCTACTTTCTAGTCTACTTGACTGTACGATTCCCACAACCAAACTA
TCTCTACTGAATAACCACACTCTCCGACAGCATAATAACTATTAATAGTT
TACACTGCGATAGTTGCACTCTAGACTTAATACAGTAATATAATAGTAAT
TGGTCACACGTATAGTGCCGCTTTGGGGGGAAAAATCGCCTGGTGAAATG
TTGTCAAGATTCCATTATTGATTGAATAAATTGGCCGTCTAGGGGTCGCT
GTAGTGATGCCCTTCCTGTCCTGTAGTGAAGACGCTGCAAGCCCCCCCCC
CCCCACAGGCCTATTGGTCTATTGGTCTATTGGTCTATTGGTCTATGAAT
AGCTACAGGACTTCACACCGCGTACGCATTCTGTGCAGCAAAAAGCTTTT
ATCACGAAAAAACTCTTACGAAAAAAACTCTTGTACAATTCCGCTGTTGC
CAGACTCGGGCAGGCTTTGAGGCAGGCGTTAGAGGACTTCCGTGCTACTG
TACTATTGCGTACCAGTGCTACTATGTGGGCGCGGTGTACAGAGAGGGAG
AAGGAACCTTTTTCCGTATTGTACATGAAGAGCAAAACCTCCCCCCGCCC
CTTCTCTCTCCCCTTCTCTCTCCCCCCTTCTTCTCTCTTTCCGCGTTTGC
ATTTGCGTTTGAATCTTCAGGGGCGCGTCGGAGGGGACGTCAAGGAGGCC
GGACTTCACCACCTGCTCGTATTGCGGGGGCATGCAGGTGGGCTGTGCGG
TGGCCGATATATTGGTAACCTCGATAACGGTAGCTTGTAAGGTGACCGAT
AGAGGTATCTTGTAAGGAGATCGGTAGATATACTTGTGAGGTGGCCGATG
CGGTGGTGGGATGTATGGCGGCAAACACTTGCCGCGTGACCAGTAAAGGT
TCTTGTGACAAGTACATGGTACCTGAGAAAAGGTACGTGTACAACTGCGG
AATCGGTAAAAAAGGTACCGTGCTTGTAAGACTGTCAAGACAGGGGTACT
GTACTACGAGGGTTTATTTGCCGCGAACAGTAGAGGTCTTAGTACGGTGG
CCGATAGAGGTGTACCCTTTCTTGCACGAGTGGCCCGCAAAGGTAAACTT
GTGCGGTGACCGATAGAGGTACCCTTTCTTGCATGGATGACCTTGTGCGG
TGGCCGATAGAGGTGTACCTTTTCTTGCACGAGTGGCCCGCAAAGGTACA
CTTGTGCGGTGGCCGATAGAGGTACCCTTTCTTGCACGGGTGACCCGCAA
AAGTACCCTTTCCCGTGCGGTGACCCATAAAAGTACCCTTTCCCGTGCGG
TGAGATCCCGAGACGCGTTTTTACTTGTTCACATACCTGTGGTGGACGTG
TTTGAGGGAATTCTTTACGACTAGACCTATGTTACTGAAACAATTTGAAT
CTGTTTAGTCTAAAGAGGCTGGTTATTTGTTTTGCTGCCTCCCGCGCTTT
ACGTGACGTTACCCCGATCCCCCCCCCCCCTCTAGGCCCCTAGACAAGCG
TAGGGTGGACTTGTTAAAGAAAAATAAGAAAATTATCTATATACAATTAA
TAAGTAAACTGTACTGTTGTAGTAGTTTTTTTTTTATGTTTTCGCCTACC
CGTGCCAAATGTTATCACGTGCTGTAGATAAGAGATATCAGCATGCCTCG
GAACGATGCAGAGTACGGTAGATACTGTATCAACTTGTCTTATGTGATAG
CTTGGGGCACTTATATAGTTGTTTCCGTCTTGCCCACGACGCTCCATACG
ATTTGTCCGTCCCCTCCGCCTCGCCCCACTCCATAACGCCTTCCTGCCCG
CCGAGAAAGGTGCCTCTCCGATCTCGGCACTGTCGAATGTGCGGGCGTTG
CGTGGCCACCTTCGACCACCACTGCGTCGCCATCGGAACCTGCATCGGGG
AGAGGAACCACTGCAGATTCTGGTGGTGGGTTGTGTATGGGTGTGTGTGT
GTATTTATTAAATTGTACATTACCGCGCAATCCGACCCTGTCATCCTAGT
CATTCGATGCCACTCGCATTGATCCTCCCGAGGGGGGGTCGATTATACTT
ATTACGAAAACCTCTGATCAGACGCGACAAAGGGGACACACTCTCTCTAG
TTGTACAGTTCTTACTTGAGCCCAGAGTACATTGTGCTCCCCCCCCCTGC
TCCTGGGATCAATGATACTTATTACGAAAACCTCTGATCAGACGCGACAA
AGGGGACAAACTCTCTCTAGTTGTGTGCGTATGTATTTATTAAATTTTTC
CACCGAAGTCTCCCCCGTTTCCCACATGGCGTCTACAAGTCGAGTGCGAT
TTCTTGCGCTTCTTCGCCTTTCCGCCCTCCCCGATCCTATCCTCGTTCCT
GTTCGCACCCTCGTCCCCGTTCCCATCTCCACTATTGCTCTCGTTTCCGT
CCCCGTTCCGGTTCCCATCCTGTGTTCGTCCAGGGGTCGTTACCCCCGCC
TCCGTCCCCGTCCCGGTCCTTGTCATCGTCCCCGCTCCCATCTCCGCTAC
TATTCTCGTTTCCGTCCCCGGCCCCGGCCCCGTTCCCATCCTGTGTTCGT
CTACGGGTCTCCACCCCCGTTCCCGCCCCGTCTCCGCTCCCGTCCCCGTT
CCCATCCTGCGCTCCTTCGTTCGCCCCTATCCCCGCTCCCGCTCCGTCCC
TGTCCCCATGACCGTTCACGTCCCCGTTCCCACCCCCCACCCCGTTACCG
TCTCCGTTTCCGCCCCCGCCGCACAATCCGCCATCCTTGTCATTCTATGT
TACTCGCATTGATCCTCCCAAGGGGTATTAAAGGACCAATGGCACTTGTT
ATGAATACCTATGGTCAGACGCGACAAAGAGGGCATACTCTCTTACCTTT
GTTATTTAACCCTCAGCACCTTGCGTGTGTGTGTCAAATCGTACAGATGC
TTAAACCCCGTTAGAGACATTGGTATTTTTTTACTTGCACCCCAAGACAG
ACGCTTTATAACCCCTTAACCCCTCTCGGGTCTCGAATATCAACACGAAT
AAACGCCACCCTCTTCCTTAGAAACCCACCGCGGAGATCCCGACGTTCAT
TTTCTTTTCTTGCCAGAAGTTTCCACAATCTTGGACCAACTTATTTTCCA
CACGTGATATAACATGTTCCCCCACCTAAACCTTGTGATTCTAGCTGCGT
TCAGATATTTTCTTAACATATGACCCGACGACACGTGCCGTTTGTAATGG
GCATGTGTTGCATTGCCTACCGTCGTTGTGCGACTCTTTGGCAGGTTTAT
CCTGTTCCAGACGCTTTCTCTCGCTGTGGCTGTTCACATCACCTCTTCGG
GGTTCCAAGGTACGGGCCCGATTAATCTCCAACCACACCAGTGTGTGTGT
GTGTGTGTGTTAATCGTTTCTTGTCTCGTGAAATTGTTGAGGCGTTTTAC
AGGCGGGGAGGGGGACGACTCGGTCGCGCGGTGTACGGTGTGCGGGTGGG
TAATGCACCATACGCGTTGATTGGGGTCTGTTTTTGCACCATTGAGTGGT
ATAGGTTGCACATTTCCACTTCACAACTGTATTGATAGTTGATTTGTGCT
GAACTTTCCGACGTCGCTGCATCCACGTATCAACACTCCGAAGATAGGAC
TCGATACGGGGTTCGGTCACTCGTACAGCTGTGCCTGAAGCGCGGCAGAC
GTATACTTGTTTCTACCATTATATACACTAGTTTTGCACACTCTGGTAAC
CGTTCACGTACATAACAATAGTGGACGTGGGAAAGAGAGGCGCATATTAA
TTGGTCCATGGTGACCTGCCAAGGCAGCACTCGTTCGGAACTACCTTGAG
GTTTACTGGCCCTGGGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTAC
GCACTTGCTTGACCCGATAAACTCGGGACTGACCCGATGGCGTATGGCGG
TTTGCATACCCTAGGTCACTGTTACGAAGGCGTCTGGGAAAGAGAGGCGC
ATATTAATTGGTCCATGGTGATGCAAAGGCAGCACCCGTCACTGAAACTA
CCTTGAGGTTTACTGGCCCTGTGTCGGCGGACTCTCGGCAGTGAACGTCA
TCGGTACGCAATTGCTTGACCCGATAAACTCGGGCTGACCCGATGGCGTA
TGTCGGTTTAAATAAATAAATGGACGCCGCCGCGGAAATCGGAAGGGATC
CCATAAGCACCAGATTCAGCCTGAGTGTTGACATATGAGCGAGCCGACGT
GGGACGGGACTGCCGAACCCGTCTCGCGAGACCATCTTCTCAGGAGCGAA
CGGAGACAGGGAAATATCATTTTCCCTGTTCAGCTGGCCACGAACAGGAT
TGGCAACCTTCCCCGGTTGATCCATGCTCTTGCTATATGTGTGACCATAC
ATGCTGAAATAGATATATGTGATGACCATACGTACACCCTAGATGACGGT
TGACATACCCTAGGTGACCGTTCACATACCATGGGTCAACGTTACACACC
TTAACGTTGGTGACTGCTTACACACCCTAGGTGACTGTTACGTACCGTAG
GTGACCGTCACGTACTCTTGGTGAACGTTATATACCCTAGCCTAGGTTAA
TCTTACATATTCTATTGCCTGGTGACGGTTTACATACCCTGGGTGACCGT
TACATCCCCTTGGGCGAACGTTACATACCCTAGTCTAGGCGACAGTTACA
CGCCGTAAGAGTCAGGGAAATGCCCATCCCGGGGATGTCAATACCCCTCC
CCTCCCTTGTAATATCAAACATAATGGAACACAAGTTAGAGCAGGTAGCA
ACGACACCGCGACGCTAACCCGGTACAAGGCGGTTGTGGCCTTGTTACCC
ATTGATTGATTGATTGATTGAAGACGGTTTCTCTGGCCTTATTGCCCATG
CGTTATCTATAAGAAAAACAACATATTCAGCATACAAATGTGGGCGAAGT
CGAATGCTCATCCCCCCACCCCCTCCAAAAACGCCATCTACCTCAGCGGA
CCCCTTTTGGCCAGGGCAATAGCTGACGCTTTCCTGCTGAAGCCCTGAGC
TAGTGCGTTATCGTCTCTCCACATGTAATTATAATGACAGTCTAGTTATA
ATGATCCAATGATATAATTGCCGTTTGCTTAGGTGTTGCAGAAGGCGAAG
CGGGGACTCACGCGATCAGTGGGTGGCTTTCGCGGAATGCGCTGGCCCTT
CTGACATCCGCTCTGCTGTGGCCCTGGCTGATCGTGGCGGTTGTGCTGCT
GGGCACCCATAGCTGGATGGCCGCGTCAAACATAACGAGCTATGAGTGCC
TCAAGGGATCGCAGTCGTTGAGCTACTTGGAGGTACGGTGTTTCAGAACG
TATTACGGCGATAAAAAAACAAAAACAAAAACATTTCCTCCAGAAAGGAT
TTATAATATAGAGCTGAGTGCCATTGCGCTATATTGGTATAGTGTAGCCC
CTCGTTGCCCGAGTGGTCTAGTATGTAACCTGCGCACCTGTTAGTGCGGA
GGTCGTGAGTTCGATTCTTGGCTAAATAAGGATTTTAATTCTTGCGTCCG
TAACGGAAAGCGTGAAAACGTGAGTAGGTGAAATTCAACCATTGGTTCAC
GAGTTGTAAGAGTGCCGAACTTGCATCGCGATAAAAAGACGTAAGGCGTG
AGCCGGGGAGAGACGGGAAGATCATTAGTGACCACAGGCAGGATGGAATG
AGGTCCATCGGCTGTAAGTGAAATGAACGAAAAAAATTAAACAAAAGTGT
AATGTTTTTTTTTCAAATACAGAGTATTACTATCGATAGGACGGATGTAA
CGCATTCATTTACCACCGTACGCGAAGAGGCACGCCTGCGCGAGAAGATT
GCCAGTTCGAGTCATGTACCACGCAATGGCAATGGGAACGGTGTCACTTG
TTGTCGTGTTTTGGAAAGCAAGCAGAGCGGTTTGAACGGCACCGGTTTTC
TTCGGAGTACTTGGTCCGATCGGGAGATACCCTATTCGGAAAATGCACTC
GGAAAAAGGCATTTGGCACGGTGGAATACCCAATAACCACCGAGCAACCA
ACAACCGAACAAAGTAGTAGTATTTTTATTCGTCGCGGTGGCCTTTACCA
TCTTTTATCGGAGGGGTGTCATAAGCTGAAACGCTTTAAAAACAAATTAC
GATCAGTGTAGTAGAGCTACATGTATTGTGGCATTGGGAGTGGATCGCGC
GAGTCAAGCCCCCCCTCCCACACACACGCCCACTTCAGCATTCAACTCCA
TCTCGAATAACGTTACCAGGACACCCGGATTTTCGATCTACCCTTCAGCG
AGGGTCTCGTGGGCAATCTTCGGGGTTTCTGCTGCTCGAGAGACGGTACG
TGCTGGTGGTGGTCGTGGAGACGTGGCGGGAAGTGGCGGCCAAGGCGTTG
GAAACCTCCCGGGCGCGTCGTGCGTGATTCTGAAGACTGGAGGTCGAATC
TATGGGAGAACAAGTACTGGTCTTGCTGCTGAAAGAACTGCAGCGCCTAT
TGAGTGTTTAGGAACTACAGGAAACACGGCGACGGTATCGTATATCGTGT
ACCGTGGGGGAGGGTGTGTGTGTTTGTGGGGGGTATGGAACTACGTCGAG
AAAACTGCGGGTTCTGACTGTTCCTCAGGTTTTCAGGGAGTGAAGAGGCA
TGAGCGTGTGTGTATGTGTGGTGGGCCAAGGGTAGGTAATTGTAGTATCC
GTACCTTGCTATAGGTCTAATAGGACAGCCAGAGAAGAAAACTAAACTCT
GGAACTGTACGGTATTCAACAGTGTAGTGTGCAAGAGTAGAATATAGCGA
GTGCTTTGTGTTTCGTGTTGAGGTTAAGAGTCTTGAAGAGATGATACGAA
GAACGTATTAATTAGTGGCGTAGCATTAGGAAAGACACAAAGGACGTAAG
TACCACCCAAGGTACACGTCGAAGGGAGACTGGCTACGTAGGGACTACAC
CATACGTGTAGTATCACCCTACAGAAGTGTACAACGGAATAACAAGCCCC
ATTGAAGATCATAAATCATGATTCTCTCCCTGACTCAGTCTAATCTATGT
ACTGTACTCTAACACCCTCCCATAGATTTCACGAGACAAATGCTGCGAGA
AACTACAGAAGAAGAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1040:181775..196790+

>mRNA_F-serratus_M_contig1040.428.1 ID=mRNA_F-serratus_M_contig1040.428.1|Name=mRNA_F-serratus_M_contig1040.428.1|organism=Fucus serratus male|type=CDS|length=1200bp|location=Sequence derived from alignment at F-serratus_M_contig1040:181775..196790+ (Fucus serratus male)
ATGCAGATGCAGGTGCCTCTCCGATCTCGGCACTGTCGAATGTGCGGGCG
TTGCGTGGCCACCTTCGACCACCACTGCGTCGCCATCGGAACCTGCATCG
GGGAGAGGAACCACTGCAGATTCTGGTGGTGCCTCTCCGATCTCGGCACT
GTCGAATGTGCGGGCGTTGCGTGGCCACCTTCGACCACCACTGCGTCGCC
ATCGGAACCTGCATCGGGGAGAGGAACCACTGCAGATTCTGGTGGTTTAT
CCTGTTCCAGACGCTTTCTCTCGCTGTGGCTGTTCACATCACCTCTTCGG
GGTTCCAAGGTTTATCCTGTTCCAGACGCTTTCTCTCGCTGTGGCTGTTC
ACATCACCTCTTCGGGGTTCCAAGGTGTTGCAGAAGGCGAAGCGGGGACT
CACGCGATCAGTGGGTGGCTTTCGCGGAATGCGCTGGCCCTTCTGACATC
CGCTCTGCTGTGGCCCTGGCTGATCGTGGCGGTTGTGCTGCTGGGCACCC
ATAGCTGGATGGCCGCGTCAAACATAACGAGCTATGAGTGCCTCAAGGGA
TCGCAGTCGTTGAGCTACTTGGAGGTGTTGCAGAAGGCGAAGCGGGGACT
CACGCGATCAGTGGGTGGCTTTCGCGGAATGCGCTGGCCCTTCTGACATC
CGCTCTGCTGTGGCCCTGGCTGATCGTGGCGGTTGTGCTGCTGGGCACCC
ATAGCTGGATGGCCGCGTCAAACATAACGAGCTATGAGTGCCTCAAGGGA
TCGCAGTCGTTGAGCTACTTGGAGGACACCCGGATTTTCGATCTACCCTT
CAGCGAGGGTCTCGTGGGCAATCTTCGGGGTTTCTGCTGCTCGAGAGACG
GTACGTGCTGGTGGTGGTCGTGGAGACGTGGCGGGAAGTGGCGGCCAAGG
CGTTGGAAACCTCCCGGGCGCGTCGTGCGTGATTCTGAAGACTGGAGGTC
GAATCTATGGGAGAACAAGTACTGGTCTTGCTGCTGAGACACCCGGATTT
TCGATCTACCCTTCAGCGAGGGTCTCGTGGGCAATCTTCGGGGTTTCTGC
TGCTCGAGAGACGGTACGTGCTGGTGGTGGTCGTGGAGACGTGGCGGGAA
GTGGCGGCCAAGGCGTTGGAAACCTCCCGGGCGCGTCGTGCGTGATTCTG
AAGACTGGAGGTCGAATCTATGGGAGAACAAGTACTGGTCTTGCTGCTGA
back to top