mRNA_F-serratus_M_contig1039.400.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1039.400.1 vs. uniprot
Match: A0A7S2BK70_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BK70_9STRA) HSP 1 Score: 341 bits (875), Expect = 1.980e-99 Identity = 206/568 (36.27%), Postives = 305/568 (53.70%), Query Frame = 1
Query: 580 WPRLAEPFRETTLVATSSEGDPSSDLFFFTVWDGDGDAGGTVLQGREVKFTFKHLGRQRVTISQIVTSTGNVNHLDTDVMVKYVRREIRQLTDDDREAFFHAVETLYRLPTSRGSLLYGDDYKGIEFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLLFEQMLQLVNPMVTVPYWEYTIEGEWFQSLGYSWYGESEVFATDWFGDANPENAFHTMDRGRFAFLPILESA-TDYIHNAYGLLRTPWNLDSTPFVTRHNVTNNSAET--SMVSCTEYRICFDSPDLATLNNCLNGGTHGPVHILIGGEWNNPEEEFAQKTSYPELVPLVTKYLWRKGYLRLPEACTRKDDGAGDASTCRASCPVELYESRGMTPYDVLVDVKALFWVARFTGGVIKYVSEEDRFVVAG-HEDDPEFEEVFWKKMLHSFCDPGHVGDLFTSSAPYDPLFWVIHPTAERFMNWRRMIAREYPDRFPLLEKWGYAHE-HIVGETGTICDWSDVREGSLDMPTCIKGICGGHKANDLLPFKINIKGEMRMMTNLEWLDFIYPTNEELPYVYNEYS-WDHCSD 2265
W LAE R T + A+++ D L+ +T D G T G +V+ F+ +G +++ ++ VMVKYVRREIR L + DR FF + T Y G YG ++ I+ V HL GA K+CDHWHDDAGIMTHH+ +TL EQ LQ ++ VT+PYW+YT + + +S++F WFG A+P + H + GR+A++ + + A TD + N YGLLR+PWN + TP++ RH + + ++ CT++ + L + LNG HGPVHI+IGG+W T+ + + L +K+LWR+GY+R PE C+ DD D TC SCP EL +R +D LF + G+ S+ F G D F+ V + + C GH G++FTS+APYDP FW IH A+R+++ +R+ A E + L + W Y+H+ + +T +CDWS V + ++ +P C G C GH+A DLLP N TN E+ F+ P NEELPY+Y+ ++ W C+D
Sbjct: 73 WGHLAEIHRSTRVEASTTVDDC---LYGWTKVDTYGTETFTGY-GDQVEMIFESVGWNGISL--LIKCPSTEQTATYPVMVKYVRREIRLLNESDRSTFFDTLYTTYTTEQVDGERAYGKKFRSIKRLVSEHLLGAADKECDHWHDDAGIMTHHIAFTLEMEQSLQSIDKTVTIPYWDYTQDAYELDD-----WTDSDIFNPAWFGMASPSSKDHVITEGRWAYMSVGKQADTDGVRNPYGLLRSPWNTNPTPYILRHRYVYDEKDGGWTLPGCTDFSSAWSYNSLGEYFDELNGELHGPVHIMIGGQWWVNRTMNFSATNGGDFL-LASKFLWRQGYVRCPELCS--DDTPDDRCTC--SCPDEL--TRYFRTSRDFLDQTGLF---NLSDGLF---SDWSNFATTGCMTPDDCFDTV-----VKALCHVGHAGEMFTSAAPYDPTFWPIHGLADRYLSLKRIQAHE--NETILSQMWSYSHDGNSPSDTRRVCDWSKVGD-TMGLPDCYVGDCAGHRAQDLLPMG-NFLDRNESYTNEEFYKFMNPRNEELPYIYDSFTQWPACTD 607
BLAST of mRNA_F-serratus_M_contig1039.400.1 vs. uniprot
Match: F0XYV7_AURAN (GRIP domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYV7_AURAN) HSP 1 Score: 358 bits (920), Expect = 3.050e-99 Identity = 205/529 (38.75%), Postives = 287/529 (54.25%), Query Frame = 1
Query: 721 VKFTFKHLGRQRVTISQIVTSTGNVNHLDTDVMVKYVRREIRQLTDDDREAFFHAVETLYRLPTSRGSLLYGDDYKGIEFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLLFEQMLQLVNPMVTVPYWEYTIEGEWFQSLGYSWYGESEVFATDWFGDANPENAFHTMDRGRFAFLPI----LESATDYIHNAYGLLRTPWNLDSTPFVTRHN--VTNNSAETSMVSCTEYRICFDSPDLATLNNCLNGGTHGPVHILIGGEWNNPEEEFA-----QKTSYPE---LVPLVTKYLWRKGYLRLPEACTRKDDGAGDASTCRASCPVELYESRGMTPYDVLVDVKALFWVARFTGGVIKYVSEEDRFVVAGHEDDPEFEEVFWKKMLHSFCDPGHVGDLFTSSAPYDPLFWVIHPTAERFMNWRRMIAREYPDRFPLLEKWGYAHEH-IVGETGTICDWSDVREGSLDMPTCIKGICGGHKANDLLPFKINIKGEMRMMTNLEWLDFIYPTNEELPYVYNEYS-WDHC 2259
V+ F G +T+S V+ G V T V YVRREIR LTD REAF A+ET Y++ G LYG YK + V++HL GA K CDHWHDDAGI+THH+G+TL EQ LQ ++ V +PYW+YT + + LG +S++F DW G +P+ H +D GR+A+ + +S D I N YGLLR+PWN D TPF+TR+ + S+ C++++ + + + LNG HGPVHI+IGG+W+ F +++ PE L +K+LWR+G++R PE C+ D G D C +CP E+ E+ PY+V+ L + + S+ D WK M H C GH G++FTS+APYDP FW +H AERF++++R+ A L E WGY H + +T +CDW+ V EG + +PTC + C GHK +DLLPF N + TN E+ F PTNE+LPY Y+ S W C
Sbjct: 125 VEVVFTAPGLHTLTLSSRVS--GEVLETKT-VKATYVRREIRTLTDAAREAFLSALETTYKVDQKDGERLYGSKYKSMASLVELHLQGAASKTCDHWHDDAGILTHHMGFTLQLEQSLQAIDNTVAMPYWDYTADAYY---LGIDEIHKSQIFQPDWLGAISPKGEDHVVDEGRWAYTAVHKYPKDSDRDLIRNPYGLLRSPWNTDKTPFITRYKDVLGVRGGGFSVPGCSDFKTTYKKDWIGDFFSDLNGALHGPVHIIIGGQWDFDASRFNLTMLDEESGMPEASGFFLLSSKFLWRQGFVRCPEFCS-DDTGNQD---CECTCPREITEN--WKPYEVMQATGQLDLNNGWLEPLYLLYSDMD-----------------WKDMWHILCHVGHAGEMFTSAAPYDPTFWPLHGLAERFLSYKRVQAAA--GETTLNETWGYTHMGALASDTDVVCDWTGV-EG-MGLPTCTRQTCAGHKKDDLLPFG-NFLDKNETYTNEEFYRFTAPTNEDLPYAYDSLSSWPAC 619
BLAST of mRNA_F-serratus_M_contig1039.400.1 vs. uniprot
Match: A0A835Z8Z2_9STRA (Tyrosinase-like protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z2_9STRA) HSP 1 Score: 337 bits (864), Expect = 1.030e-97 Identity = 205/588 (34.86%), Postives = 303/588 (51.53%), Query Frame = 1
Query: 577 PWPRLAEPFRETTLVATSSEGDPSSDLFFFTVWDGDGDAGGTVLQGREVKFTFKHLGRQRVTISQ----IVTSTGNVNHLDTDVMVKYVRREIRQLTDDDREAFFHAVETLYRLPTSRGSLLYGDDYKGIEFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLLFEQMLQLVNPMVTVPYWEYTIEGEWFQSLGYSWYGESEVFATDWFGDANPENAFHTMDRGRFAFLPILESATDY--IHNAYGLLRTPWNLDSTPFVTR----HNVTNNSAETSMVSCTEYRICFDSPDLATLNNCLNGGTHGPVHILIGGEWNNP--EEEFAQKTSYPELVPL----VTKYLWRKGYLRLPEACTRKDDGAGDASTCRASCPVELYESRGMTPYDVLVDVKALFWVARF-TGGVI--KYVSE--EDRFVVAGHEDDPEFEEVFWKKMLHSFCDPGHVGDLFTSSAPYDPLFWVIHPTAERFMNWRRMI-AREYPDRFPLLEKWGYAHEHIVGETGTICDWSDVREGSLDMPTCIKGICGGHKANDLLPFKI---NIKGEMR-MMTNLEWLDFIYPTNEELPYVYNEYSWDHCS 2262
PW +AEP++ TT + SSD + W DG G G+ + F +G +T+ + + + V+VKYVRREIRQL D DREAFF AV L R+PT G LYG DY ++ V+MHL G DCDHWH G +T H+ YTL+FE+ LQ VNP V+VPYW++T+E +++ + +S VF+ DWFG+A+P+N HT ++GRFA++P + +A ++ ++N+YGLLR PWN D TPF+TR + + NN + C EY + L LN HG +H +GG WN+ E A T Y + ++K +WR GYL + C D + ASTC C + + G PYDVL++ L F T G + +V+E E + + G+ ++ V ++ +L + C+PGH+GD+F +++ D FWV+HPT +R ++ R+ A Y ET W D C GH D+ PFK + G R TN E D ++P ++ +PYVY +++WDHC+
Sbjct: 90 PWDYIAEPYKVTTFELVDEDLPDSSDSLDYR-WILDGHLQGV---GKSTQAVFTTIGNYTMTVEAFWPGVDADLATLLSTNITVVVKYVRREIRQLIDQDREAFFSAVSVLQRVPTRVGQRLYGSDYYSKDYLVRMHLYFGGTADCDHWHQGPGFVTSHMAYTLMFEKALQAVNPSVSVPYWDFTLESTFYEPATWR---DSPVFSGDWFGEASPDNDLHTPNKGRFAYVPTMNNAREFSKVYNSYGLLRAPWNADPTPFMTRSKKVYGLDNNMKPSG---CLEYAKVIRMGNWMDLARQLNSAAHGHIHETVGGSWNHAFGSEVNASDTIYSFAHQIQASALSKDVWRAGYLLCADGC----DPSLPASTCECECSEDSMQ--GQDPYDVLLNSGVLATALYFDTNGTLISSFVAEDGEVHYQLEGYTEEES--AVIYQDLLTTLCNPGHIGDMFQATSSNDITFWVLHPTMDRLWHYVRLTNASSY------------------NET-----WEDT------------ATCYGHNPTDIQPFKGLFGDSDGSGRDYYTNAELYDALHPASDAMPYVYADFNWDHCT 624
BLAST of mRNA_F-serratus_M_contig1039.400.1 vs. uniprot
Match: A0A7S2AXN9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AXN9_9STRA) HSP 1 Score: 321 bits (823), Expect = 1.560e-94 Identity = 175/421 (41.57%), Postives = 240/421 (57.01%), Query Frame = 1
Query: 1072 LQLVNPMVTVPYWEYTI-------EGEWFQ--SLGYSWYG----ESEVFATDWFGDANPENAFHTMDRGRFAFLPILESATDY--IHNAYGLLRTPWNLDSTPF-VTRHNVTNNSAETSMVSCTEYRICFDSPDLATLNNCLNGGTHGPVHILIGGEW-------NNPEEEFAQKTSYPELVPLVTKYLWRKGYLRLPEACTRKDDGAGDASTCRASCPVELYESRGMTPYDVLVD-VKALFWVARFTGGVIKYVSEEDRFVVAGHEDDPEFEEVFWKKMLHSFCDPGHVGDLFTSSAPYDPLFWVIHPTAERFMNWRRMIAREYPDRFPLLEKWGYAHEHIVGETGTICDWSDVREGSLDMPTCIKGICGGHKANDLLPFKINIKGEMRMMTNLEWLDFIYPTNEELPYVYNEYSWDHCS 2262
+QLV+P V++P+W+YT+ E E+F SLG W +S++F DWFG +PE H + RGR+ +L+ A +Y I N YGLLR+PWN D T + RH+ N MVSC ++ CFDS DLA++N CLNG THGP+HILIGG+W N F + +L L+ K LWRKGYLR PE C++ A C SCP+E G TPY++LVD + + WV + G I Y ED + + E EV W ++L C+PGH G+++TS+APYDP FW+IHP+AER ++WRRM+ ++ + WGY+H+ + G IC+W DV + L P C C GH A D PF + I E TN E ++ P NEELPY+Y+ Y W HC+
Sbjct: 2 MQLVDPSVSIPFWDYTLDAYRYCHENEYFMVGSLG-CWRASVIKKSQIFFDDWFGAGSPETPDHAVHRGRWGNTTVLQDAREYSSITNPYGLLRSPWNTDPTAHALRRHSQVLNQNLDPMVSCERWQDCFDSVDLASMNTCLNGATHGPIHILIGGQWFLNSALLENDHMVFQGGLAGDQL--LLAKILWRKGYLRCPETCSKDTP----AEKCLCSCPMEY--RHGATPYEILVDKAEVMHWVVETSRGGIYYNKTEDHYHIMNKTLAEE--EVLWNEILLVLCNPGHPGEMYTSAAPYDPTFWLIHPSAERMLSWRRML--DHLSVHTFNQTWGYSHQGDPSDMGQICEWDDVSDFGL--PFCYDSTCPGHNAADTTPF-MGIVEEGEFPTNEEIYAYVAPWNEELPYMYDTYYWPHCN 406
BLAST of mRNA_F-serratus_M_contig1039.400.1 vs. uniprot
Match: A0A6C0HC93_9ZZZZ (Tyrosinase_Cu-bd domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HC93_9ZZZZ) HSP 1 Score: 325 bits (834), Expect = 5.640e-93 Identity = 213/614 (34.69%), Postives = 305/614 (49.67%), Query Frame = 1
Query: 511 GATSDDVLSLL-----TANEYKPVERAPWPRLAEPFRETTL-VATSSEGDPSSDLFFFTVWDGDGDAGGTVLQGREVKFTFKHLGRQRVTISQIVTSTGNVNHLDTDVMVKYVRREIRQLTDDDREAFFHAVETLYRLPTSRGSLLYGDDYKGIEFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLLFEQMLQLVNPMVTVPYWEYTIEGEWFQSLGYSWYGESEVFATDWFGDANPENAFHTMDRGRFAFLPILESATDYIH-------------NAYGLLRTPWNLDSTPFVTRHNVTNNSAE-TSMVSCTEYRICFDSPDLATLNNCLNGGTHGPVHILIGGEWNNP---EEEFAQKTSYPELVPLVTKYLWRKGYLRLPEACTRKDDGAGDASTCRASCPVELYESRGMTPYDVLVDVKALFWVARFTGGVIKYVSEEDRFVVAGHEDDPEFEEVFWKKMLHSFCDPGHVGDLFTSSAPYDPLFWVIHPTAERFMNWRR-MIAREYPDRFPLLEKWGYAHEHIVGETGT---ICDWSDVR-EGSLDMPTC-IKGICGGHKANDLLPFKINIKGEMRMMTNLEWLDFIYPTNEELPYVYNEYSWDHCSD 2265
G TS D + T E + +E PW LAEP+++ V + D S DL + V D V + V + VTIS + T +V + + VKYVRREIR LTD+DRE+FF A+E LY L + G LYG + E+F HL GAG DCDHWHD AGI+THH+ +TL FEQ LQ +NP +T PYWEY ++ S Y + +S +F DWFG ++P N H +D G ++ DY N +G +R+PWN + + RHN T + + +M C+ + CF S LA LN+C NG THGPVHILIGG W + +E P+ + L K LWR GY R P+ CT + C+ S P + ++ G +V Y + E++ A E + K+L + DPG G++F+S+A +DP FW +H ER + +R MI++ F E W + + +CDWS+V G L +PTC + IC GH +D+L F N TN ++ +FI+P +E+LPY Y+ + +D+C+D
Sbjct: 77 GTTSSDYFIRIKVEDPTYGEIQTLEDLPWDALAEPYKKQYFYVDEFTIADKSIDLSSYIVSWTIADQYNFVGNDQFVMLNNTGVYDASVTISSKLP-TNSVYTYEFTLAVKYVRREIRSLTDEDRESFFSALELLYSLSETEGQRLYGSKFHTAEYFSYKHLTGAGTTDCDHWHDGAGIITHHMAFTLEFEQSLQSINPALTNPYWEYGMD-----SYLYDHWADSPIFDEDWFGMSSPTNPEHKIDDGGRWDNLLVPDGDDYTEWSIQDTGSLNPYINGFGHMRSPWNNNPFQQLGRHNKTYSMTQYETMPDCSILQSCFKSDSLADLNDCSNGETHGPVHILIGGAWGDGGLFNDEDVTMVQKPDKL-LFFKVLWRMGYTRCPDTCTY-------GTPCKCSVPQQYIDAYGAETILKATNV---------------YYALENQLKNADDE--------LFLKVLRAVEDPGIAGEMFSSAAAFDPTFWPLHGQLERLLGAKRIMISQGTITNFD--ETWAFTEYNKASGAAYLNGVCDWSNVAGAGDLTLPTCTLDVICDGHNEDDVLEFS-NFLDLDEEYTNADFYEFIHPWSEDLPYTYDTWDFDYCAD 650 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1039.400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1039.400.1 >prot_F-serratus_M_contig1039.400.1 ID=prot_F-serratus_M_contig1039.400.1|Name=mRNA_F-serratus_M_contig1039.400.1|organism=Fucus serratus male|type=polypeptide|length=708bp MEGLPSPPPSVLGWKSKPMVRGAALVALLFPVVSAGGIGSSRAVVGDPDDback to top mRNA from alignment at F-serratus_M_contig1039:67008..124368- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1039.400.1 ID=mRNA_F-serratus_M_contig1039.400.1|Name=mRNA_F-serratus_M_contig1039.400.1|organism=Fucus serratus male|type=mRNA|length=57361bp|location=Sequence derived from alignment at F-serratus_M_contig1039:67008..124368- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1039:67008..124368- >mRNA_F-serratus_M_contig1039.400.1 ID=mRNA_F-serratus_M_contig1039.400.1|Name=mRNA_F-serratus_M_contig1039.400.1|organism=Fucus serratus male|type=CDS|length=4248bp|location=Sequence derived from alignment at F-serratus_M_contig1039:67008..124368- (Fucus serratus male)back to top |