mRNA_F-serratus_M_contig1029.327.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1029.327.1
Unique NamemRNA_F-serratus_M_contig1029.327.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1029.327.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 3.960e-65
Identity = 128/334 (38.32%), Postives = 192/334 (57.49%), Query Frame = 1
Query:    1 GARYNQADPCVFR---RKQVVVIIVVYVDDLLVLSETKQDEHQTLEDLRSGFPIKDLREISYYLACHITRDRKARTVTFDQQRYTQTITERFDIRKTSVIPVPTGKAPLSKADGPQNDTGIAEMYDIPYRETVGALIWVPNMTRPDLAYTAHTLAKFGNNPGPEHWKAVMKALQYLKRTASQGVTYR-GATEDMKLSAWVDADHASCPDTRHSVSRGAVMLV*GAISWFSRVQRIIATAMSESEYAALVEIVNELRFIRQVKASMVPPID-YNIRVHEDNEGATKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREQHADVLTKAI 987
            G   + +DPCV R     +V+ I  ++VDD+L    TK+     +E L    P K+L E+ ++L C I+RDR+A T+   Q+ Y + + ERF+I +TS IP     +P + +     D    E  D+P+RE VG L+W+ N TRP+ +    T+A+  + P    WKA  K L YLK TA   + Y+   T D+    +VDAD AS    R SVS   V++V   +SWFS  Q+ ++ + SE+EY A+ + V E  F+  +   + P      I V EDNEGA  +AEN  SS +++HIDV+HH +R+  + G++ V +V S+EQHAD+LTKA+
Sbjct:   43 GFEQSLSDPCVLRFMMGDEVMGIFAIHVDDILYAG-TKRLAEVIVEALGDSLPTKNLGEVRFFLGCEISRDREAGTIEISQESYIRNVLERFNICRTSSIPA----SPANDSRSVMEDE---EAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVVGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEAFFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 368          
BLAST of mRNA_F-serratus_M_contig1029.327.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 7.180e-63
Identity = 118/328 (35.98%), Postives = 193/328 (58.84%), Query Frame = 1
Query:   19 ADPCVFRRKQ---VVVIIVVYVDDLLVLSETKQDEHQTLEDLRSGFPIKDLREISYYLACHITRDRKARTVTFDQQRYTQTITERFDIRKTSVIPVPTGKAPLSKADGPQNDTGIAEMYDIPYRETVGALIWVPNMTRPDLAYTAHTLAKFGNNPGPEHWKAVMKALQYLKRTASQGVTY-RGATEDMKLSAWVDADHASCPDTRHSVSRGAVMLV*GAISWFSRVQRIIATAMSESEYAALVEIVNELRFIRQVKASMVPPIDYN-IRVHEDNEGATKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREQHADVLTKAI 987
            AD CVFR  +   V++IIVV+VDD+  + + ++ + +  EDL    P+K+L E+ +Y AC   RD +   +   QQR+ + +   + I     +P+P     +   D  +N+       D+P+RE VG+L+W+   TRPD+A     +A++  +P   HWKA +  L Y++RT+  G+T+ RG    M +  +VDAD+AS    R SVS G VM   G ++WFSR Q+ +  + +E+EY A+ +++ E+ F+RQV   M+P      I V EDN+GA ++  N  ++  ++HIDV+HH +R+ V+   + + +V ++ QHAD LTKAI
Sbjct:   41 ADACVFRLMEEGRVIMIIVVHVDDIFAVGQKERCD-KFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVS---VKLTDFDENEASA----DVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAI 360          
BLAST of mRNA_F-serratus_M_contig1029.327.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 1.820e-62
Identity = 119/328 (36.28%), Postives = 193/328 (58.84%), Query Frame = 1
Query:   19 ADPCVFRRKQ---VVVIIVVYVDDLLVLSETKQDEHQTLEDLRSGFPIKDLREISYYLACHITRDRKARTVTFDQQRYTQTITERFDIRKTSVIPVPTGKAPLSKADGPQNDTGIAEMYDIPYRETVGALIWVPNMTRPDLAYTAHTLAKFGNNPGPEHWKAVMKALQYLKRTASQGVTY-RGATEDMKLSAWVDADHASCPDTRHSVSRGAVMLV*GAISWFSRVQRIIATAMSESEYAALVEIVNELRFIRQVKASMVPPIDYN-IRVHEDNEGATKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREQHADVLTKAI 987
            AD CVFR  +   V++IIVV+VDD+  + + ++ + +  EDL    P+K+L E+ +Y AC   RD +   +   QQR+ + +   + I     +P+P     +   D  +N+       D+P+RE VG+L+W+   TRPD+A     +A++  +P   HWKA +  L Y++RT+  G+T+ RG    M +  +VDAD+AS    R SVS G VM   G ++WFSR Q+ +  + +E+EY A+ +++ E+ F+RQV   M+P      I V EDN+GA ++A N  ++  ++HIDV+HH +R+ V+   + + +V +  QHAD LTKAI
Sbjct:  103 ADACVFRLMEEGRVIMIIVVHVDDIFAVGQKERCD-KFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVS---VKLTDFDENEA----CADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAI 422          
BLAST of mRNA_F-serratus_M_contig1029.327.1 vs. uniprot
Match: A0A6H5JRZ9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ9_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 2.430e-62
Identity = 126/329 (38.30%), Postives = 196/329 (59.57%), Query Frame = 1
Query:   19 ADPCVFR---RKQVVVIIVVYVDDLLVLSETKQDEHQTLEDLRSGFPIKDLREISYYLACHITRDRKARTVTFDQQRYTQTITERFDIRKTSVIPVPTG-KAPLSKADGPQNDTGIAEMYDIPYRETVGALIWVPNMTRPDLAYTAHTLAKFGNNPGPEHWKAVMKALQYLKRTASQGVTYR-GATEDMKLSAWVDADHASCPDTRHSVSRGAVMLV*GAISWFSRVQRIIATAMSESEYAALVEIVNELRFIRQVKASMVPP-IDYNIRVHEDNEGATKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREQHADVLTKAI 987
            AD CVFR     +VV+++VV+VDD+  +  TK+   Q  +DL    P+K L E+ +Y  C+  RDR+A  +T  QQ YT+ + ER+ +     IP+PT  K     AD P          + P+R  VG+L+W+  +TRPD+A +   +A++   P   HWKA +  L Y  RT+S G++++ G      L  +V+AD+AS    R SVS G VM   GAI+WFS+ Q+ +  + +++EY A+ ++  E+ F+RQV   M+P  +   I ++EDNEGA ++A++  S+  ++HIDV+HH +R  VD   V + +V S+ QHAD LTKA+
Sbjct:  101 ADSCVFRFVEEGEVVLLLVVHVDDIFAVG-TKERCDQFGKDLGEYVPVKSLGELKWYSGCYYERDREAGRLTISQQTYTEELGERYGVEWGGGIPLPTTWKLWDFDADEPS--------VEHPFRALVGSLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSILGYAVRTSSFGISFQSGTVSGFSLITFVNADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLRQVWRFMLPKELRPCIPLYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQYQHADFLTKAL 420          
BLAST of mRNA_F-serratus_M_contig1029.327.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 7.660e-62
Identity = 131/335 (39.10%), Postives = 196/335 (58.51%), Query Frame = 1
Query:    1 GARYNQADPCVFR---RKQVVVIIVVYVDDLLVLSETKQDEHQTLEDLRSGFPIKDLREISYYLACHITRDRKARTVTFDQQRYTQTITERFDIRKTSVIPVPTGKAPLSKADGPQNDTGIAEMYDIPYRETVGALIWVPNMTRPDLAYTAHTLAKFGNNPGPEHWKAVMKALQYLKRTASQGVTYR-GATEDMKLSAWVDADHASCPDTRHSVSRGAVMLV*GA-ISWFSRVQRIIATAMSESEYAALVEIVNELRFIRQVKASMVPPID-YNIRVHEDNEGATKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREQHADVLTKAI 987
            G   + +DPCV R     +V+ II ++VDD+L    TK+     +E L    P K+L E+ ++L C  +RDR+A T+   Q+ Y +++ ERF+I +TS IP     +P + +     D    E  D+P+RE VG L+W+ N TRP+ +    T+A+  + P    WKA  K L YLK TA   + Y+   T D+    +VDAD AS    R SVS GA++LV G  +SWFS  Q+ ++ + SE+EY A+ + V E  F+  +   + P      I V EDNEGA  +AEN  SS +++HIDV+HH +R+  + G++ V +V S+EQHAD+LTKA+
Sbjct:  383 GFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAG-TKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPA----SPANDSRSVMEDE---EAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVS-GALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 708          
BLAST of mRNA_F-serratus_M_contig1029.327.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 9.850e-62
Identity = 124/334 (37.13%), Postives = 195/334 (58.38%), Query Frame = 1
Query:    1 GARYNQADPCVFRRKQ---VVVIIVVYVDDLLVLSETKQDEHQTLEDLRSGFPIKDLREISYYLACHITRDRKARTVTFDQQRYTQTITERFDIRKTSVIPVPTGKAPLSKADGPQNDTGIAEMYDIPYRETVGALIWVPNMTRPDLAYTAHTLAKFGNNPGPEHWKAVMKALQYLKRTASQGVTY-RGATEDMKLSAWVDADHASCPDTRHSVSRGAVMLV*GAISWFSRVQRIIATAMSESEYAALVEIVNELRFIRQVKASMVPP-IDYNIRVHEDNEGATKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREQHADVLTKAI 987
            G     AD CVFR  +   VV+I+VV+VDD+  +  TK+   Q  +DL    P+K L E+ +Y  C+  RDR+A  +T  Q+ YT+ + ER  +     IP+PT        D   N+  +    + P+R  +G+L+WV  +TRPD+A     +A++ + P   HW+A +  L Y  RT+S G+++ RG      L  + DAD+AS    R SVS G VM   GAI+WFS+ Q+ +  + +++EY A+ ++  E+ F+R+V   M+P  +   I ++EDNEGA ++A++  S+  ++HIDV+HH +R  VD   V + +V S+ QHAD LTKA+
Sbjct:   43 GFEQCMADSCVFRLVEDGEVVLILVVHVDDIFAVG-TKERCDQFGKDLGEYVPVKSLGELQWYSGCYYERDREAGRLTISQETYTKELGERHGVEWGGGIPLPTT---WRLWDSDVNEPSV----EYPFRALIGSLLWVALLTRPDIANAVRAVARYCSEPKLIHWRAALGILGYAVRTSSFGISFQRGTVSGFSLITFADADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLREVWRFMLPKELRPCIPLYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQYQHADFLTKAL 368          
BLAST of mRNA_F-serratus_M_contig1029.327.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 1.000e-61
Identity = 122/328 (37.20%), Postives = 194/328 (59.15%), Query Frame = 1
Query:   19 ADPCVFR---RKQVVVIIVVYVDDLLVLSETKQDEHQTLEDLRSGFPIKDLREISYYLACHITRDRKARTVTFDQQRYTQTITERFDIRKTSVIPVPTGKAPLSKADGPQNDTGIAEMYDIPYRETVGALIWVPNMTRPDLAYTAHTLAKFGNNPGPEHWKAVMKALQYLKRTASQGVTYR-GATEDMKLSAWVDADHASCPDTRHSVSRGAVMLV*GAISWFSRVQRIIATAMSESEYAALVEIVNELRFIRQVKASMVPPIDYN-IRVHEDNEGATKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREQHADVLTKAI 987
            AD CVFR     +VVV +VV+VDD+  + E ++ + Q   DL +  P+K+L ++ +Y  C   RD  A T+   QQ Y + +   F +     IP+P G   L  ++  Q++    E+   P+RE +G+L+W+   TRPD+A     +A++  +P   HW+A +  L Y+ RT+  G+T+R G+   + +  +VDAD+AS    R SVS G VM   G ISWFSR Q+ +  + +E+EY +L +++ E+ F+RQV   M+P      I V EDN+GA ++A+N  S+  ++HIDV+HH +R+ V    + + +V+S  QHAD LTKA+
Sbjct:  103 ADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCD-QFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVG---LKLSEFDQDE----EVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 422          
BLAST of mRNA_F-serratus_M_contig1029.327.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 4.160e-60
Identity = 122/328 (37.20%), Postives = 194/328 (59.15%), Query Frame = 1
Query:   19 ADPCVFR---RKQVVVIIVVYVDDLLVLSETKQDEHQTLEDLRSGFPIKDLREISYYLACHITRDRKARTVTFDQQRYTQTITERFDIRKTSVIPVPTGKAPLSKADGPQNDTGIAEMYDIPYRETVGALIWVPNMTRPDLAYTAHTLAKFGNNPGPEHWKAVMKALQYLKRTASQGVTYR-GATEDMKLSAWVDADHASCPDTRHSVSRGAVMLV*GAISWFSRVQRIIATAMSESEYAALVEIVNELRFIRQVKASMVPPIDYN-IRVHEDNEGATKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREQHADVLTKAI 987
            AD CVFR     +VVV +VV+VDD+  + E ++ + Q   DL +  P+K+L ++ +Y  C   RD  A T+   QQ Y + +   F +     IP+P G   L  ++  Q++    E+   P+RE +G+L+W+   TRPD+A     +A++  +P   HW+A +  L Y+ RT+  G+T+R G+   + +  +VDAD+AS    R SVS G VM   G ISWFSR Q+ +  + +E+EY +L +++ E+ F+RQV   M+P      I V EDN+GA ++A+N  S+  ++HIDV+HH +R+ V    + + +V+S  QHAD LTKA+
Sbjct:  277 ADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCD-QFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVG---LKLSEFDQDE----EVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 596          
BLAST of mRNA_F-serratus_M_contig1029.327.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 1.450e-59
Identity = 121/329 (36.78%), Postives = 191/329 (58.05%), Query Frame = 1
Query:   19 ADPCVFR---RKQVVVIIVVYVDDLLVLSETKQDEHQTLEDLRSGFPIKDLREISYYLACHITRDRKARTVTFDQQRYTQTITERFDIRKTSVIPVPTGKAPLSKADGPQNDTGIAEMYDIPYRETVGALIWVPNMTRPDLAYTAHTLAKFGNNPGPEHWKAVMKALQYLKRTASQGVTYR-GATEDMKLSAWVDADHASCPDTRHSVSRGAVMLV*GAISWFSRVQRIIATAMSESEYAALVEIVNELRFIRQVKASMVPPIDYN-IRVHEDNEGATKMAENRFSSRQTRHIDVKHHMVRDAVDGGI-VRVEYVKSREQHADVLTKAI 987
            AD CVFR     +VVV +VV+VDD+  + E ++ + Q   DL +   +K+L ++ +Y  C   RD  A T+   QQ Y + +   F +     IP+P G   LS+ D  +      E+   P+RE +G+L+W+   TRPD+A     +A++  +P   HW+A +  L Y+ RT+  G+T+R G+   + +  + DAD+AS    R SVS G VM   G ISWFSR Q+ +  + +E+EY +L +++ E+ F+RQV   M+P      I V EDN+GA ++A+N  S+   +HIDV+HH +R+ V G   + + +V+S  QHAD LT+A+
Sbjct:    2 ADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERYD-QFGRDLNTMVRVKNLGDLIWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGMK-LSEFDQDE------EVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRELVVGRKEISIFHVESAYQHADFLTRAL 322          
BLAST of mRNA_F-serratus_M_contig1029.327.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 6.670e-59
Identity = 111/313 (35.46%), Postives = 183/313 (58.47%), Query Frame = 1
Query:   55 VIIVVYVDDLLVLSETKQDEHQTLEDLRSGFPIKDLREISYYLACHITRDRKARTVTFDQQRYTQTITERFDIRKTSVIPVPTGKAPLSKADGPQNDTGIAEMYDIPYRETVGALIWVPNMTRPDLAYTAHTLAKFGNNPGPEHWKAVMKALQYLKRTASQGVTY-RGATEDMKLSAWVDADHASCPDTRHSVSRGAVMLV*GAISWFSRVQRIIATAMSESEYAALVEIVNELRFIRQVKASMVPPIDYN-IRVHEDNEGATKMAENRFSSRQTRHIDVKHHMVRDAVDGGIVRVEYVKSREQHADVLTKAI 987
            +I+VV+VDD+  + + ++ + +  EDL    P+K+L E+ +Y AC   RD +   +   QQR+ + +   + I     +P+P     +   D  +N+       D+P+RE VG+L+W+   TRPD+A     +A++  +P   HWKA +  L Y++RT+  G+T+ RG    M +  +VDAD+AS    R SVS G VM   G ++WFSR Q+ +  + +E+EY A+ +++ E+ F+RQV   M+P      I V EDN+GA ++A N  ++  ++HIDV+HH +R+ V+   + +  V +  QHAD LTKAI
Sbjct:    1 MIMVVHVDDIFAVGQKERCD-KFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVS---VKLTDFDENEA----CADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAI 305          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1029.327.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRE7_9PHAE3.960e-6538.32Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L4G9_9PHAE7.180e-6335.98Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JEF2_9PHAE1.820e-6236.28Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRZ9_9PHAE2.430e-6238.30Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JV80_9PHAE7.660e-6239.10Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWK8_9PHAE9.850e-6237.13Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLN0_9PHAE1.000e-6137.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE4.160e-6037.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KR24_9PHAE1.450e-5936.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE6.670e-5935.46Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1029contigF-serratus_M_contig1029:128425..129411 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score90.5
Seed ortholog evalue4.7e-16
Seed eggNOG ortholog67593.Physo130920
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QH7N@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size987
Cds size297
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1029.327.1prot_F-serratus_M_contig1029.327.1Fucus serratus malepolypeptideF-serratus_M_contig1029 128755..129051 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928832.9481876-UTR-F-serratus_M_contig1029:128424..1287541622928832.9481876-UTR-F-serratus_M_contig1029:128424..128754Fucus serratus maleUTRF-serratus_M_contig1029 128425..128754 -
1690962592.9722927-UTR-F-serratus_M_contig1029:128424..1287541690962592.9722927-UTR-F-serratus_M_contig1029:128424..128754Fucus serratus maleUTRF-serratus_M_contig1029 128425..128754 -
1622928832.968995-UTR-F-serratus_M_contig1029:129051..1294111622928832.968995-UTR-F-serratus_M_contig1029:129051..129411Fucus serratus maleUTRF-serratus_M_contig1029 129052..129411 -
1690962592.9944286-UTR-F-serratus_M_contig1029:129051..1294111690962592.9944286-UTR-F-serratus_M_contig1029:129051..129411Fucus serratus maleUTRF-serratus_M_contig1029 129052..129411 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928832.9604585-CDS-F-serratus_M_contig1029:128754..1290511622928832.9604585-CDS-F-serratus_M_contig1029:128754..129051Fucus serratus maleCDSF-serratus_M_contig1029 128755..129051 -
1690962592.984392-CDS-F-serratus_M_contig1029:128754..1290511690962592.984392-CDS-F-serratus_M_contig1029:128754..129051Fucus serratus maleCDSF-serratus_M_contig1029 128755..129051 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1029.327.1

>prot_F-serratus_M_contig1029.327.1 ID=prot_F-serratus_M_contig1029.327.1|Name=mRNA_F-serratus_M_contig1029.327.1|organism=Fucus serratus male|type=polypeptide|length=99bp
MYDIPYRETVGALIWVPNMTRPDLAYTAHTLAKFGNNPGPEHWKAVMKAL
QYLKRTASQGVTYRGATEDMKLSAWVDADHASCPDTRHSVSRGAVMLV*
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mRNA from alignment at F-serratus_M_contig1029:128425..129411-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1029.327.1 ID=mRNA_F-serratus_M_contig1029.327.1|Name=mRNA_F-serratus_M_contig1029.327.1|organism=Fucus serratus male|type=mRNA|length=987bp|location=Sequence derived from alignment at F-serratus_M_contig1029:128425..129411- (Fucus serratus male)
GGAGCTCGCTACAACCAAGCCGATCCCTGCGTGTTCCGGCGGAAGCAGGT CGTCGTCATCATTGTGGTCTACGTTGACGATCTACTGGTGCTGAGTGAAA CGAAGCAGGACGAGCATCAGACGCTGGAAGACCTTCGATCCGGCTTCCCC ATCAAGGATCTAAGGGAGATCTCGTACTACCTGGCATGTCACATTACTCG GGACCGCAAGGCCAGGACGGTGACGTTCGATCAGCAGCGGTACACGCAGA CGATAACCGAGCGATTCGATATTCGAAAGACCAGCGTGATCCCTGTTCCT ACGGGGAAAGCGCCACTTTCGAAGGCAGACGGGCCGCAAAACGACACTGG GATTGCAGAGATGTATGACATCCCGTATCGCGAGACAGTGGGAGCACTAA TATGGGTACCAAACATGACTCGGCCTGACCTAGCTTATACCGCGCACACG CTCGCCAAGTTCGGAAACAACCCCGGGCCCGAGCACTGGAAGGCGGTAAT GAAAGCGCTACAGTACCTGAAACGAACGGCGAGCCAAGGGGTAACATATA GAGGCGCGACGGAGGACATGAAACTATCGGCATGGGTGGACGCCGATCAC GCATCATGCCCTGATACGCGCCATTCGGTATCGAGGGGCGCGGTTATGCT AGTTTGAGGGGCAATCAGTTGGTTTTCGCGGGTGCAGAGGATAATCGCGA CAGCGATGTCCGAATCGGAGTACGCAGCACTAGTGGAGATTGTGAATGAG CTACGTTTCATTCGGCAGGTGAAAGCGTCTATGGTACCTCCAATAGACTA CAACATCCGCGTTCACGAGGACAACGAGGGCGCTACCAAGATGGCAGAGA ACAGGTTTAGCAGTCGACAAACAAGACATATCGACGTGAAACATCATATG GTTCGGGACGCCGTCGATGGGGGAATAGTCCGAGTAGAATATGTCAAGTC CAGAGAACAACATGCGGACGTACTAACTAAGGCGATA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1029:128425..129411-

>mRNA_F-serratus_M_contig1029.327.1 ID=mRNA_F-serratus_M_contig1029.327.1|Name=mRNA_F-serratus_M_contig1029.327.1|organism=Fucus serratus male|type=CDS|length=594bp|location=Sequence derived from alignment at F-serratus_M_contig1029:128425..129411- (Fucus serratus male)
ATGTATGACATCCCGTATCGCGAGACAGTGGGAGCACTAATATGGGTACC
AAACATGACTCGGCCTGACCTAGCTTATACCGCGCACACGCTCGCCAAGT
TCGGAAACAACCCCGGGCCCGAGCACTGGAAGGCGGTAATGAAAGCGCTA
CAGTACCTGAAACGAACGGCGAGCCAAGGGGTAACATATAGAGGCGCGAC
GGAGGACATGAAACTATCGGCATGGGTGGACGCCGATCACGCATCATGCC
CTGATACGCGCCATTCGGTATCGAGGGGCGCGGTTATGCTAGTTTGAATG
TATGACATCCCGTATCGCGAGACAGTGGGAGCACTAATATGGGTACCAAA
CATGACTCGGCCTGACCTAGCTTATACCGCGCACACGCTCGCCAAGTTCG
GAAACAACCCCGGGCCCGAGCACTGGAAGGCGGTAATGAAAGCGCTACAG
TACCTGAAACGAACGGCGAGCCAAGGGGTAACATATAGAGGCGCGACGGA
GGACATGAAACTATCGGCATGGGTGGACGCCGATCACGCATCATGCCCTG
ATACGCGCCATTCGGTATCGAGGGGCGCGGTTATGCTAGTTTGA
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