mRNA_F-serratus_M_contig1026.322.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5K408_9PHAE (Uncharacterized protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K408_9PHAE) HSP 1 Score: 134 bits (337), Expect = 8.240e-34 Identity = 66/137 (48.18%), Postives = 101/137 (73.72%), Query Frame = 3 Query: 612 VYREEPTAHCCKTVRGAITTWLNVEDDLAVLEAEIDMEIQAVENNFANLEV-DSASSEDEDGDGRSESCIAPSLTEADVRSRLKEVCYYLYPNGKNGEYRKTLYLPSRSVHSFIHKSRAKRKAREGRETQATLRDLW 1019 ++ E + + V+ A++TWL+VEDD VL E+++E++ V N + + V D SSE+ED DGR ESC+ +++EA+VRSRL++V YLY NG++GEY +T+YL S++VHSF H+++ KR+ +EG E QATLRD+W Sbjct: 109 LFVESTSGRTEQEVQSAVSTWLSVEDDEEVLREEVELEMEEVTENMSRVHVEDDVSSEEEDQDGRQESCMTSTISEAEVRSRLEDVRSYLYANGRDGEYSETVYLLSKTVHSFTHETQVKRRTKEGGEVQATLRDVW 245
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5KQT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQT9_9PHAE) HSP 1 Score: 134 bits (338), Expect = 9.040e-34 Identity = 65/124 (52.42%), Postives = 96/124 (77.42%), Query Frame = 3 Query: 651 VRGAITTWLNVEDDLAVLEAEIDMEIQAVENNFANLEV-DSASSEDEDGDGRSESCIAPSLTEADVRSRLKEVCYYLYPNGKNGEYRKTLYLPSRSVHSFIHKSRAKRKAREGRETQATLRDLW 1019 VRGA++TWL+VEDD + E+++E++ V N + + V D SSE+ED DGR ESC+ +++EA+VRSRL++V YLY NG++GEY +T+YL S++VHSF H+++ KR+ +EG E QATLRD+W Sbjct: 139 VRGAVSTWLSVEDDEELFREEVELEMEEVTENMSRVHVEDDVSSEEEDQDGRQESCMTSTISEAEVRSRLEDVRSYLYANGRDGEYSETVYLLSKTVHSFTHETQVKRRTKEGGEVQATLRDVW 262
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5L464_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L464_9PHAE) HSP 1 Score: 132 bits (333), Expect = 1.040e-33 Identity = 65/124 (52.42%), Postives = 95/124 (76.61%), Query Frame = 3 Query: 651 VRGAITTWLNVEDDLAVLEAEIDMEIQAVENNFANLEV-DSASSEDEDGDGRSESCIAPSLTEADVRSRLKEVCYYLYPNGKNGEYRKTLYLPSRSVHSFIHKSRAKRKAREGRETQATLRDLW 1019 VR A++TWL VED+ VL E+++E++ V N + + V D SSE+ED DGR ESC+ +++EA+VRSRL++V YLY NG++GEY +T+YL S++VHSF H+++ KR+ +EG E QATLRD+W Sbjct: 80 VRSAVSTWLRVEDNEEVLREEVELEMEEVTENMSRVHVEDDVSSEEEDQDGRQESCMTSTISEAEVRSRLEDVRSYLYANGRDGEYSETVYLLSKTVHSFTHETQVKRRTKEGGEVQATLRDVW 203
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5L2W8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W8_9PHAE) HSP 1 Score: 131 bits (330), Expect = 4.190e-33 Identity = 68/118 (57.63%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 223 YQTEMVANLAELIEDWDTVHVRRFRSGCRGLSDAGQAIMLEVTEILPKKRGGFSTQTVIRCWLKAGIFSSNHENALRRKDMQPDREDKEDTAIIDSTATIDDLCNLVAKITMPTSITD 576 Y+TEMVA LAELIEDWDTV R+ + GCRGLSDAGQA ML VTEI +K QTVIRCWLKAGI N L+ D + DREDK+D A+ID LC++V+K++MP +TD Sbjct: 15 YKTEMVARLAELIEDWDTVRARKVQRGCRGLSDAGQATMLNVTEICSQKWRRLDVQTVIRCWLKAGILPREDCNVLKGMDTRLDREDKDDAAVIDG------LCDMVSKMSMPAIVTD 126
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5JLK3_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK3_9PHAE) HSP 1 Score: 133 bits (335), Expect = 9.730e-32 Identity = 73/130 (56.15%), Postives = 89/130 (68.46%), Query Frame = 1 Query: 223 YQTEMVANLAELIEDWDTVHVRRFRSGCRGLSDAGQAIMLEVTEILPKKRGGFSTQTVIRCWLKAGIFSSNHENALRRKDMQPDREDKEDTAIIDSTATIDDLCNLVAKITMPTSITD--AISMPRILTD 606 Y+TEMV LA LIEDWDT R+ R+GCRGL+DAGQ ML+VTE+L +K FS QTVIRCWLKA I HE+AL+ D + DRED TA+ DDLC++V K++MP S D A S PR+LTD Sbjct: 213 YKTEMVMRLAALIEDWDTARARQIRTGCRGLNDAGQPTMLDVTEVLSQKWESFSDQTVIRCWLKATIRPGEHESALKDNDTRLDREDPGATAL-------DDLCDMVEKMSMPESAKDLDARSKPRVLTD 335
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5KSV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV5_9PHAE) HSP 1 Score: 123 bits (308), Expect = 2.230e-30 Identity = 71/145 (48.97%), Postives = 91/145 (62.76%), Query Frame = 1 Query: 223 YQTEMVANLAELIEDWDTVHVRRFRSGCRGLSDAGQAIMLEVTEILPKKRGGFSTQTVIRCWLKAGIFSSNHENALRRKDMQPDREDKEDTAIIDSTATIDDLCNLVAKITMPTSITD--AISMPRILTDILCIEKNPQLTAAKL 651 Y+TEMV LA LIEDWDT + R G RGL+DAGQ ML+VTEI +K S QTVIRCWLKA I HE+AL+ KD + D+ED A++DDLC++V K++M S D A S PR+LT+ L +E LT ++ Sbjct: 13 YKTEMVMRLAALIEDWDTARALKIRRGYRGLNDAGQPTMLDVTEIPSQKWESVSDQTVIRCWLKATILPGEHESALKDKDTRLDQEDP-------GAASLDDLCDMVEKMSMAESAKDLDARSQPRVLTENLFVESASGLTGEEV 150
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5JEK6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK6_9PHAE) HSP 1 Score: 127 bits (320), Expect = 3.930e-29 Identity = 65/118 (55.08%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 223 YQTEMVANLAELIEDWDTVHVRRFRSGCRGLSDAGQAIMLEVTEILPKKRGGFSTQTVIRCWLKAGIFSSNHENALRRKDMQPDREDKEDTAIIDSTATIDDLCNLVAKITMPTSITD 576 Y+ E +A LA+LIEDWDTV R+ + GC+G SDAGQA +L+VTEI +K F QTVIRCWLKAGI + H N + D + DREDK D AIID LC++V+K++MP SITD Sbjct: 463 YRNEKMARLADLIEDWDTVRARKIQRGCQGFSDAGQATVLDVTEICSQKWRSFDVQTVIRCWLKAGILPTEHCNVPKGMDTRLDREDKGDVAIIDG------LCDMVSKMSMPASITD 574
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5KII5_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII5_9PHAE) HSP 1 Score: 124 bits (310), Expect = 9.720e-29 Identity = 68/137 (49.64%), Postives = 87/137 (63.50%), Query Frame = 1 Query: 223 YQTEMVANLAELIEDWDTVHVRRFRSGCRGLSDAGQAIMLEVTEILPKKRGGFSTQTVIRCWLKAGIFSSNHENALRRKDMQPDREDK-------EDTAIIDSTATIDDLCNLVAKITMPTSI--TDAISMPRILTD 606 Y+TEMV L+ +IEDWDTV R +GCRGLSDAGQA ML+V E+L +K FS QTV+RCWLKA I S HE+ L+RKD + +D +D LC+LVAK++MP S+ TDA +P +LTD Sbjct: 236 YKTEMVVRLSGVIEDWDTVRARNIPTGCRGLSDAGQATMLDVAEVLTQKWESFSDQTVVRCWLKATILSEEHEDVLKRKDTRLAGKDNGKXXXXXXXXXXXXXRGLVDGLCDLVAKLSMPDSVDVTDARKIPGVLTD 372
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5KNJ6_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNJ6_9PHAE) HSP 1 Score: 110 bits (275), Expect = 2.340e-26 Identity = 52/84 (61.90%), Postives = 69/84 (82.14%), Query Frame = 3 Query: 774 SSEDEDGDGRSESCIAPSLTEADVRSRLKEVCYYLYPNGKNGEYRKTLYLPSRSVHSFIHKSRAKRKAREGRETQATLRDLWRN 1025 S++DEDG GR ESC+ S+TEA+VR L++VC YLY NGK+GEYR+T YL S+ VHSF H+++ KR+A+EG E QATLRD+WR+ Sbjct: 29 STDDEDGGGRPESCVTSSMTEAEVRGSLEKVCSYLYANGKDGEYRETQYLLSKVVHSFTHETQVKRRAKEGGELQATLRDMWRS 112
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5K0Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y4_9PHAE) HSP 1 Score: 118 bits (295), Expect = 1.070e-25 Identity = 68/139 (48.92%), Postives = 85/139 (61.15%), Query Frame = 1 Query: 223 YQTEMVANLAELIEDWDTVHVRRFRSGCRGLSDAGQAIMLEVTEILPKKRGGFSTQTVIRCWLKAGIFSSNHENALRRKDMQPDREDKEDTAIIDSTATIDDLCNLVAKITMPTSITDAISMPRILTDILCIEKNPQLT 639 Y+TEMVA LA+L+EDWDT A ML+VTEI +K F QTVIRCWLKAGI H N L+ D + DREDK++ AIID LC++V+K++MP S+TD SMPR+LTD L +E LT Sbjct: 404 YKTEMVARLADLMEDWDT------------------ATMLDVTEICSQKWRSFDVQTVIRCWLKAGILPREHCNVLKGMDTRLDREDKDNAAIIDG------LCDMVSKMSMPASVTDHGSMPRVLTDNLFVETGADLT 518 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1026.322.1 >prot_F-serratus_M_contig1026.322.1 ID=prot_F-serratus_M_contig1026.322.1|Name=mRNA_F-serratus_M_contig1026.322.1|organism=Fucus serratus male|type=polypeptide|length=210bp MLAQGRHLFQQSRERPQEEGYATRSRRQGGHGHHRQHGHHRRSLQLGREDback to top mRNA from alignment at F-serratus_M_contig1026:186115..193542+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1026.322.1 ID=mRNA_F-serratus_M_contig1026.322.1|Name=mRNA_F-serratus_M_contig1026.322.1|organism=Fucus serratus male|type=mRNA|length=7428bp|location=Sequence derived from alignment at F-serratus_M_contig1026:186115..193542+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1026:186115..193542+ >mRNA_F-serratus_M_contig1026.322.1 ID=mRNA_F-serratus_M_contig1026.322.1|Name=mRNA_F-serratus_M_contig1026.322.1|organism=Fucus serratus male|type=CDS|length=1260bp|location=Sequence derived from alignment at F-serratus_M_contig1026:186115..193542+ (Fucus serratus male)back to top |