|
Homology
BLAST of mRNA_F-serratus_M_contig1024.317.1 vs. uniprot
Match: A0A6H5JRK3_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK3_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 6.740e-10 Identity = 34/62 (54.84%), Postives = 39/62 (62.90%), Query Frame = 2
Query: 1694 CSNGLVGVESEDGEICCVADCGMCGGVGCATAGELTGDECCTQRIFSMGELCDVAGEAPCII 1879
C+NG+ GVES GE+CC A CG CGGVGC G DECCT I G+ C V G APC +
Sbjct: 674 CTNGVAGVESTMGEVCCPASCGHCGGVGCDERGAA--DECCTTEIMDYGQPCSVTGTAPCYL 733
BLAST of mRNA_F-serratus_M_contig1024.317.1 vs. uniprot
Match: D8LG71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG71_ECTSI) HSP 1 Score: 73.2 bits (178), Expect = 1.130e-9 Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 3
Query: 909 TSTDVTVIDYLPCSNGVDGIEADDGSVCCVTECGQCGGSGCASAGGLTGDECCTGSIVSAGQSCEVTGEAPCIID 1133
T V V D + CSNG GIE +D +VCC C CGGS C + GLTG +CCTG+I++ + C G APC++D
Sbjct: 160 TQVAVAVADSV-CSNGFPGIENEDATVCCDPACVVCGGSTCGNVAGLTGADCCTGTIIANDELCSEKGSAPCVVD 233
BLAST of mRNA_F-serratus_M_contig1024.317.1 vs. uniprot
Match: D7FHN6_ECTSI (Glycin-rich protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN6_ECTSI) HSP 1 Score: 73.9 bits (180), Expect = 1.500e-9 Identity = 34/62 (54.84%), Postives = 39/62 (62.90%), Query Frame = 2
Query: 1694 CSNGLVGVESEDGEICCVADCGMCGGVGCATAGELTGDECCTQRIFSMGELCDVAGEAPCII 1879
C+NG+ GVES GE+CC A CG CGGVGC G DECCT I G+ C V G APC +
Sbjct: 1177 CTNGVPGVESTMGEVCCPASCGHCGGVGCDERGAA--DECCTTEIMDYGQPCSVTGTAPCYL 1236
BLAST of mRNA_F-serratus_M_contig1024.317.1 vs. uniprot
Match: A0A6H5K5M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5M2_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 6.900e-9 Identity = 35/62 (56.45%), Postives = 44/62 (70.97%), Query Frame = 3
Query: 945 CSNGVDGIEADDGSVCCVTECGQCGGSGCASAG---GLTGDECCTGSIVSAGQSCEVTGEAP 1121
CS+G++GI+ + G+VCC CGQCGG+GC SAG GL CC GSI S+G C+ TGEAP
Sbjct: 82 CSDGIEGIDGN-GAVCCPLGCGQCGGTGCTSAGAANGLDSGSCCGGSIKSSGNYCDDTGEAP 142
BLAST of mRNA_F-serratus_M_contig1024.317.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 68.6 bits (166), Expect = 7.120e-8 Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 3
Query: 933 DYLPCSNGVDGIEADDGSVCCVTECGQCGGSGCASAG--GLTGDECCTGSIVSAGQSCEVTGEAPCIIDMDAAEDTPAP 1163
+ + CS G+ GIE+ DG+VCC C QCGG GC++ G + CC + SAG SC V+ EAPC++D D T P
Sbjct: 672 EVIVCSTGIPGIESSDGTVCCPINCTQCGGEGCSTVGLPEYGAESCCELDVQSAGVSCSVSEEAPCVLD-DVLSPTETP 749
BLAST of mRNA_F-serratus_M_contig1024.317.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 9.390e-8 Identity = 35/65 (53.85%), Postives = 42/65 (64.62%), Query Frame = 3
Query: 945 CSNGVDGIEADDGSVCCVTECGQCGGSGCASAG---GLTGDECCTGSIVSAGQSCEVTGEAPCII 1130
CSNG++GI+ G VCC CGQCGGSGC SAG GL G CC+ +++ CE T APCII
Sbjct: 683 CSNGIEGID-HKGEVCCPLACGQCGGSGCGSAGSANGLDGASCCSSEVLAGNVYCEDTNAAPCII 746
BLAST of mRNA_F-serratus_M_contig1024.317.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 2.090e-7 Identity = 34/69 (49.28%), Postives = 43/69 (62.32%), Query Frame = 3
Query: 933 DYLPCSNGVDGIEADDGSVCCVTECGQCGGSGCASAGG---LTGDECCTGSIVSAGQSCEVTGEAPCII 1130
D CSNG++GI+ G VCC CGQCGG+GC SAG L G+ CC+ +++ CE T APCII
Sbjct: 656 DTQTCSNGIEGID-HKGEVCCPLACGQCGGTGCGSAGSAFELDGESCCSSQVLAGNVYCEDTNAAPCII 723
BLAST of mRNA_F-serratus_M_contig1024.317.1 vs. uniprot
Match: D8LDU6_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU6_ECTSI) HSP 1 Score: 64.7 bits (156), Expect = 7.890e-7 Identity = 34/67 (50.75%), Postives = 40/67 (59.70%), Query Frame = 3
Query: 948 SNGVDGIEADDGSVCCVTECGQCGGSGCASAG---GLTGDECCTGSIVSAGQSCEVTGEAPCIIDMD 1139
S+GV GIE+ + VCC CG CGG GC+ G GL CC +I G+SC VTG APC ID D
Sbjct: 196 SHGVVGIESSNKKVCCDLRCGTCGGVGCSKFGEAYGLGESSCCASTITDDGESCAVTGMAPCFIDSD 262
BLAST of mRNA_F-serratus_M_contig1024.317.1 vs. uniprot
Match: D7FZM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM0_ECTSI) HSP 1 Score: 59.3 bits (142), Expect = 1.370e-6 Identity = 29/75 (38.67%), Postives = 41/75 (54.67%), Query Frame = 2
Query: 1466 CSNGVVGLESEDGEVCCVTECGQCGGRGCASAGGLTN-DECCTGQIVSVGELCEVTGEAPCVIGIAGSPTPSDTM 1687
CSNG+ G + DG+ CC+ CG CGG GC S G +CC I++ +C APC+I +PTP+ +
Sbjct: 7 CSNGLPGYQ--DGQACCLMNCGLCGGDGCGSVNGTAGASDCCPSTIINSARVCGGDIVAPCIIPATPAPTPAPAL 79
BLAST of mRNA_F-serratus_M_contig1024.317.1 vs. uniprot
Match: D8LJ42_ECTSI (FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ42_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 1.620e-5 Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 2
Query: 1502 GEVCCVTECGQCGGRGCASAG-GLTNDECCTGQIVSVGELCEVTGEAPCVI 1651
G+ CC CG+CGG GC++ G GL D+CC I G +C VTG+APC+I
Sbjct: 640 GDFCCSAGCGECGGDGCSNRGEGLDGDDCCQSDIKDNGNMCSVTGKAPCMI 690
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 131.3 |
Seed ortholog evalue | 1e-27 |
Seed eggNOG ortholog | 2880.D7FJ68 |
Preferred name | MTPAP |
KEGG ko | ko:K08342,ko:K16462,ko:K17478,ko:K18060 |
KEGG Pathway | ko04136,ko04138,ko04140,map04136,map04138,map04140 |
Hectar predicted targeting category | other localisation |
EggNOG free text desc. | importin-alpha family protein binding |
EggNOG OGs | COG0086@1,KOG0260@2759,KOG4725@1,KOG4725@2759 |
EC | 2.7.7.19 |
COG Functional cat. | S |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000,ko01002,ko01009,ko03029,ko03036,ko03110,ko04131,ko04812 |
Exons | 10 |
Model size | 3068 |
Cds size | 1257 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928829.8273726-UTR-F-serratus_M_contig1024:232144..232577 | 1622928829.8273726-UTR-F-serratus_M_contig1024:232144..232577 | Fucus serratus male | UTR | F-serratus_M_contig1024 232145..232577 - |
1690962591.8954341-UTR-F-serratus_M_contig1024:232144..232577 | 1690962591.8954341-UTR-F-serratus_M_contig1024:232144..232577 | Fucus serratus male | UTR | F-serratus_M_contig1024 232145..232577 - |
1622928829.9098332-UTR-F-serratus_M_contig1024:235756..235933 | 1622928829.9098332-UTR-F-serratus_M_contig1024:235756..235933 | Fucus serratus male | UTR | F-serratus_M_contig1024 235757..235933 - |
1690962591.954441-UTR-F-serratus_M_contig1024:235756..235933 | 1690962591.954441-UTR-F-serratus_M_contig1024:235756..235933 | Fucus serratus male | UTR | F-serratus_M_contig1024 235757..235933 - |
1622928829.9264574-UTR-F-serratus_M_contig1024:236027..236085 | 1622928829.9264574-UTR-F-serratus_M_contig1024:236027..236085 | Fucus serratus male | UTR | F-serratus_M_contig1024 236028..236085 - |
1690962591.9628258-UTR-F-serratus_M_contig1024:236027..236085 | 1690962591.9628258-UTR-F-serratus_M_contig1024:236027..236085 | Fucus serratus male | UTR | F-serratus_M_contig1024 236028..236085 - |
1622928829.9450324-UTR-F-serratus_M_contig1024:237022..237409 | 1622928829.9450324-UTR-F-serratus_M_contig1024:237022..237409 | Fucus serratus male | UTR | F-serratus_M_contig1024 237023..237409 - |
1690962591.9714742-UTR-F-serratus_M_contig1024:237022..237409 | 1690962591.9714742-UTR-F-serratus_M_contig1024:237022..237409 | Fucus serratus male | UTR | F-serratus_M_contig1024 237023..237409 - |
1622928829.960618-UTR-F-serratus_M_contig1024:238230..238348 | 1622928829.960618-UTR-F-serratus_M_contig1024:238230..238348 | Fucus serratus male | UTR | F-serratus_M_contig1024 238231..238348 - |
1690962591.9803994-UTR-F-serratus_M_contig1024:238230..238348 | 1690962591.9803994-UTR-F-serratus_M_contig1024:238230..238348 | Fucus serratus male | UTR | F-serratus_M_contig1024 238231..238348 - |
1622928829.9711347-UTR-F-serratus_M_contig1024:239059..239381 | 1622928829.9711347-UTR-F-serratus_M_contig1024:239059..239381 | Fucus serratus male | UTR | F-serratus_M_contig1024 239060..239381 - |
1690962591.9888742-UTR-F-serratus_M_contig1024:239059..239381 | 1690962591.9888742-UTR-F-serratus_M_contig1024:239059..239381 | Fucus serratus male | UTR | F-serratus_M_contig1024 239060..239381 - |
1622928829.9816525-UTR-F-serratus_M_contig1024:239574..239692 | 1622928829.9816525-UTR-F-serratus_M_contig1024:239574..239692 | Fucus serratus male | UTR | F-serratus_M_contig1024 239575..239692 - |
1690962591.9975188-UTR-F-serratus_M_contig1024:239574..239692 | 1690962591.9975188-UTR-F-serratus_M_contig1024:239574..239692 | Fucus serratus male | UTR | F-serratus_M_contig1024 239575..239692 - |
1622928830.0311935-UTR-F-serratus_M_contig1024:241858..242056 | 1622928830.0311935-UTR-F-serratus_M_contig1024:241858..242056 | Fucus serratus male | UTR | F-serratus_M_contig1024 241859..242056 - |
1690962592.005983-UTR-F-serratus_M_contig1024:241858..242056 | 1690962592.005983-UTR-F-serratus_M_contig1024:241858..242056 | Fucus serratus male | UTR | F-serratus_M_contig1024 241859..242056 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928829.8445618-CDS-F-serratus_M_contig1024:232577..233224 | 1622928829.8445618-CDS-F-serratus_M_contig1024:232577..233224 | Fucus serratus male | CDS | F-serratus_M_contig1024 232578..233224 - |
1690962591.9072146-CDS-F-serratus_M_contig1024:232577..233224 | 1690962591.9072146-CDS-F-serratus_M_contig1024:232577..233224 | Fucus serratus male | CDS | F-serratus_M_contig1024 232578..233224 - |
1622928829.8629398-CDS-F-serratus_M_contig1024:233446..233548 | 1622928829.8629398-CDS-F-serratus_M_contig1024:233446..233548 | Fucus serratus male | CDS | F-serratus_M_contig1024 233447..233548 - |
1690962591.9304225-CDS-F-serratus_M_contig1024:233446..233548 | 1690962591.9304225-CDS-F-serratus_M_contig1024:233446..233548 | Fucus serratus male | CDS | F-serratus_M_contig1024 233447..233548 - |
1622928829.882019-CDS-F-serratus_M_contig1024:234072..234297 | 1622928829.882019-CDS-F-serratus_M_contig1024:234072..234297 | Fucus serratus male | CDS | F-serratus_M_contig1024 234073..234297 - |
1690962591.9390588-CDS-F-serratus_M_contig1024:234072..234297 | 1690962591.9390588-CDS-F-serratus_M_contig1024:234072..234297 | Fucus serratus male | CDS | F-serratus_M_contig1024 234073..234297 - |
1622928829.8945851-CDS-F-serratus_M_contig1024:235473..235756 | 1622928829.8945851-CDS-F-serratus_M_contig1024:235473..235756 | Fucus serratus male | CDS | F-serratus_M_contig1024 235474..235756 - |
1690962591.9465678-CDS-F-serratus_M_contig1024:235473..235756 | 1690962591.9465678-CDS-F-serratus_M_contig1024:235473..235756 | Fucus serratus male | CDS | F-serratus_M_contig1024 235474..235756 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1024.317.1 >prot_F-serratus_M_contig1024.317.1 ID=prot_F-serratus_M_contig1024.317.1|Name=mRNA_F-serratus_M_contig1024.317.1|organism=Fucus serratus male|type=polypeptide|length=419bp
MTTTMRTVMPATESQSMPTSSTSTSTSTACSNGVVGLESEDGEVCCVTEC GQCGGRGCASAGGLTNDECCTGQIVSVGELCEVTGEAPCVIGIAGSPTPS DTMPTCSNGLVGVESEDGEICCVADCGMCGGVGCATAGELTGDECCTQRI FSMGELCDVAGEAPCIITFDTTGSPTMSPTMSPTMSPTVSSASPTFSPSA APTDMTETPTITPPMWSTTPSAAPTGDRSTAPTFFLYTFSTVEAIGITPS PQQPVPMATVAPSPSPTGTSHLGVGVGSWSMLNPTSTDSASITTVSAIMS PSPTGDSTSDGLRDILGRSASPSAGPTGGPTAGPTAGPTAGPTAGPTAAP SAAPSAAPSAASSAAPSAAPSSFGAEIDSPNQTAPENSSSRGISSAAGWP MVSAFSAAFGAFFIAAWW* back to topmRNA from alignment at F-serratus_M_contig1024:232145..242056- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1024.317.1 ID=mRNA_F-serratus_M_contig1024.317.1|Name=mRNA_F-serratus_M_contig1024.317.1|organism=Fucus serratus male|type=mRNA|length=9912bp|location=Sequence derived from alignment at F-serratus_M_contig1024:232145..242056- (Fucus serratus male) GTCAAAGCGCCCGACGACGCGACGGTCGCAGCACGCGAATTGCAGGATGC
GTGCGGCGCCACCGAGCCCATCGAGATAGTATCCCCGGCGTTCTCTGACT
TGGAGGGATGTTTTTTCGTCACGGACTCCGCGACAGACACCCTGTACTTC
TCCACCGACTTCGCCTCCGCCGTGGGCATCATTGAGGGCCAAGGGAGTGT
GAGAAGCGAGACCGTGACCAAGTATATAGGCTCATGAGCGTTTCTTTTTT
CTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCAACCCTTTTTT
GCTTTGCTTGTTCTTTTACACTGCTAATAATATGTACCTGGTATCAGGTA
TGAGCGTCAAGCCTATACTGCCGCCGATTCCTGTCGCTTCTCTCTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTCTTAACCATTATTTTCGTGAGATAGTT
TATAACCAACCAGAGCCTCCTTGGCACAACAAGCAGTTTGTATATGATAA
GGTGTGATGTGATTAAAGCTGTTCGTTGGTCTAACACAAGAGTGCCAGAC
TTATTATTGCGAGTAAACAAAGACCGTTGAGCGTTGACTATTGAAGCCAT
CGATGGCGGCATTGTAGGCATTTTTTTTTTTTTTCTAATCACACTCATAG
CCGATGGAGCTCTAATTACCATCCTGCCTGTGGCCACAAAGGATCTTCCC
ATCTCTCCCCGGTTCACGCCTTACAATTTTTATCGCGATGCAAGTTCAGC
ACTCTTACAACTCGTCAACCAATGGTTGAATTTTACTTACTCACGTTCCC
ACGCTTTCCGTTACGAAAGAAAGAACACAAATCCTACGCTGGTAAGAATC
GAACTCACGACTTCCGCACGAGCAGGTATGCCTGGTTATACCTACCTACT
AGACCACTCGTTGTAATGCCAAAAGCACCAACTTTGATTTATGTGAGCTC
ATTTGATGTCGCCTCAAGCCTCTGAAATTGAAAAACCTTGTGGTGGCGCT
CTCGATTCGCTTGTTTACACCAGCACCAGCACCGAATCGTGGACTCAAGG
CTTGTGGGGGTAGGGCTGCTGTATACAGTAGCTCTGGGCAGTCAAAAAAC
CGACATGACAACCGTTAGAGAGCTACTGATAGTCATAGTCTAGCTCTATA
GAAGCTAAGAGACTTATTGAGAACAATGGAAACCACAAGGCTAAGGACGA
TTCTTTCCAGCGCCCTTCTTAAGTCTGGGATGCTCCGATGTCGGAATCTC
CACACTACTACGAGTACTGTATGTATATGAAACGCCGTCTGCCTTAGTGG
TGGTGGCTGAGCAGCTGTTCACTGTACCTTGTTCTGTCATCCGAGCAAGG
TACATGCACGCAATACGACAGAATAAGGTATATACTCGTTCATCAACTGA
AAAAAAAAAAAGTTAAATTGTTTTAGTAGTAGAAGTGAGCCTCATTTTTG
AATATATATGTAGACTAGGTAGTCAAGTTATTTGTTTTTCTCTCAAATAT
TTTGTGTCTTCTCCAACCTTTTTGACGGTACGTAGAGCCCGTCAGTCAGC
CAACGTATTGCTGTACCGGTCATCATCCCGAGTAGTATATTATAGTGTCA
TATCTTAGACCACTCTGTCTTCCTTTGGCCCACGACTGCAACGTTTGCGT
GTCAGTCACTGCAGTAGTACTAATACTGATACTATTGAAATAAATCATCA
GACTACACTACTACAGCAGAGAGTGGAGGCTAGAGAGTCTCCGGTAGGGG
TAAATTGTTGTAGTAGTAGAAGTGAGCCTCATTTTTGAATATATATGTAG
ACTAGGTAGTCAAGTTATTTGTTTTTCTCTCAAATATTTTGTGTCTTCTC
CAACCTTTTTGACGGTACGTAGAGCCCGTCAGTCAGCCAACGTATTGCTG
TACCGGTCATCATCGCGAGTAGTATATTATAGTGTCATATCTTAGACCAC
TCTGTCTTCCTTTGGCCCACGACTGCAACGTTTGCGTGTCAGTCACTGCG
GTAGTACTAATACTGATACTATTGAAATAAATCATTAGACTACACTACTA
CAGCAGAGAGTGGAGGCTAGAGAGTCTCCGGTAGGGGGCCCCATCTACAT
CTACCCGGTTCACGTCGGTCCCTTTTGTTTAAGTATTAAAGTACAGTATA
CATGTCGCGGTGCAAGTTCAGCATTGATTTCAAAAACGTCCACACAGACC
TTCCTTGGCCCAAGGCTTCTACCGCAGTAGCACCGTAACGCCTCCATAAT
AACCTATACTACAGTACAGTAAATGATACCAGACCAGTAATTCATACAGT
AACTGATTATACATTTTGTACCGGGTCGTGTCTTTCCGCTGTGCGCGTCG
CACGCTGCATGCAGACATCCTGGGCGGCTTGGTTCTACGCGGACGGCTCC
CCGGAGTCCAACCCCACAATTGTGTGCTACTCCTCAGAGGACGCTGACGT
AGTCGACGCCACCGAAGTGACGGCATGGCTCTGTGAGTACTGTACTGTAT
TAACTGTACTATTAATAGTAATATTGTGAAGAAAACATTATACATACATT
AGTAATTTATTTCGGGATCTCTACTGCGTCGTTCCGTTCGATTTTTGTGT
ATGTCTGCGTTGTTTCCATCTACTCTACATACTTACGGCATTTATTTATT
GGTTTGTTTTTTGTGTGCAATTCAGGCGATTTCGATCTAGACGGCACCTT
CGAAGCGGCCACGGCCTCCGAGTTCACCATCGACTGCGGCTGCAGCTCCG
CGAGCACCACGGACAGCGGGGACGTGATACCCGCGCCTTCCCCCCCTGCC
CCCACGCCTCCCCTGGGAGCGACTCGTGCGGCGACGGAGACGCCTTCACC
ATCATATCCGACGAGTTCCCCGAGACGGAAGGGTGTTACCGCGACTCTGG
GCGGACCGAGGAGGGAGAGCCCGTGTATACCCTGACGGGCACGCCGTTAT
TAGGGCAGCAGACAGTGTTCGCGTCCGTCGAGGACGACACCGACGAGGTG
TGGCGTCTGAAGTATATCACAGCACAGCACAGCAACTTGGACATGACATT
TCTTTCATGCTCGTACTAAACCCACTACTTATAGCTTGGAAGATATCGTA
GTTTTTTTTTTGTTTTTTTTTTTTCTCGTTTTGTGGTGGGGAATTTCGGC
GTTGTTTTTGTGGTTTGGGGGGGGGGACGGAAGGAAAATGATCTCCTCCC
CCCCCCCCCCTCAATAAATAAGTATATATACGGAGTATATACTTTAAATA
TATACCCTGGTATAGCGTTTGGATACAAGCTGCTAAGTTGCTTTTTTTGT
CCCTTTCACGCCCAGGATATTGATGAGTTACGTTTGTTCCGCAAGAGTCT
TGCACCTGAAGTAGCTATGCTCCGGAAAACACATCAATTTTGTCTGTTAC
CTGTCCACCTCTCTTGTTTTCAGCGTTCTGCCGTCCACGTCAACACGCAT
TATTACCAATTGATGTAGTAATTGATTATTATTGAGTGGGATGTAGAGAA
AAGATTACGTAAGAGTTGTTGTCGTTCCTTCCCGCCCTACCGCCCCCGCC
CCCGCCCCCCCCCCCCCCCCTCAAGAAAAAAAATAGACGGTCGCGTCTGC
CTGTGGAATAAAGCTACGACATCATCTCGATCTCGACAACCTACTACATT
CAATATTGGTGCTGCAGTTGTGCCTTTTCCCGCCGTTATGCTATTTTGCG
TTCTGCAGGCATTCTGGGTAGTGGCCTTCGCGGCTCAGGCGACTTCAGCC
TCCAAGGCTGAGACGTACTGCATCTCGGCGGAGGCGGCATCTTCCGTACA
CCCCTCCGAAGTCACAGAATGGGGCTGTGAGTCGACGAAGGCGTTCGTCT
CGGTGCAGACATGGGCCCGAAAGCACATTGCTCTCGCCCTCGAGCTCTGA
ACCTTGCATTGATTGTGTTGGTTGTTGATACACAGTGCCACACGCTTGAC
GAGCTGAGGTCGAAAGCGTCTGAACGTACAGTAAAGCGTAAAGGACGCGG
CAGCGCTCCCCCCTAACAAGTAATGGAACAAAACATACTCTTTATATATA
TATATATATATTTAGCCTACTGGTATAATCTATTTTTTCAGGCACGTGTG
GTGTACTATCTGAAGGGCGCACAGGCGGGTTGTTTTTTTGTTGAGATGGA
GGGGTTCAAGTTGAACCGTGGGAAGAAATGACTCCTTCAATGCCCACCTT
TGTCTGCCCCTGTTCCCCGCCATCCGTACCACTACTACGAGGTACTTGTT
ACTTGTACAGACACTTGTTACAGAAATAGTATTTTATGATAGTGTACATA
TTCTTAGTATTATGCTGTGTTTCATGCGCACCATGCATCGCATCACGCCA
TACTAAACTAGTATTACTGCGTACCGCGACGCACACACACACACACACAC
ACACACATCACACACACACACACACACAAAACAACAAAATCATCCGCGTC
AAAATATGACGCACACATTGTATTACGACAAAATAGCTCTCTTGCGAGAG
CCCGCCCGATGCACGAAAAACGCGCGCACTCTTGCGAGCTCCTGTAGTAT
ATAGACAGTACTAGAGACGCCTTTTTTACAAAGATACTTTCTTTTTTGAT
CCATCATATCGCTGTTTTCCCTCTACTCTCTCGTGCTGCGTCCACAGGCA
TCATCGACTCGGTCACCGCAACCGCTACCGATGCCGAGTTCAGCGTCGTC
TGCGGGTGCTCCGATTCTGGCACCACGGAAATCGAGACCAGCACAACCAC
GTCAACCACCACTACAGGCACGGGCTCCACGACAACCACCACCTTAATAA
CGAGCACCGATGTCACCGTGATCGACTACCTGCCGTGCAGCAACGGGGTC
GACGGCATCGAGGCGGACGACGGCAGCGTGTGCTGCGTGACCGAGTGCGG
TCAGTGCGGCGGGTCGGGCTGCGCCTCGGCGGGAGGCTTGACGGGGGACG
AGTGCTGCACGGGGTCCATCGTCTCCGCGGGGCAATCGTGCGAGGTGACC
GGAGAGGCTCCTTGCATCATCGACATGGACGCTGGTGAGTTTGTTTAGTG
GGTGGGTCGGTTGATTCGCCGTATGGGTTGGTCTTGGGGAGAGTCCAAGA
CGAGGCAAGACGAAAGACGAGGCACTATAGCGCCCCGAAAGAGTTTGGAC
TTTGATCAAAAGGCCAACAAGCGTTTCCTATGAAACTGCTGCTATAAGCC
TGCAAGAGCATATGCTGTCTAGAACTATATCGTTTATATCTTAATTTTTC
TTACACGTCGGACGGGAAATTGACACCACGTACATTCACTAGACGTAGAA
AAAAAATGCGCAGGACCTACGGTGGCAGCAAGATGGATCGCGGGGGTGTT
GACAGAAGTTCCCCTTGTGCAGTTTGTAACAGGGGGTCTATAAAGACATG
GCCGTTGGCGCCTCTTTTTCGTATCGGCCCGATTAAGTTGAAGTACAGAT
CTGTGACATCCCCCCCCCCCGCCTCCTCCATGTGCCACCCATTTTTTATC
CCCGAGTTGGACACCTCAGTAACCTCAGTAGGAGAGATTGCATTTCATCT
TACACGCCAATGGGTTGGTGTCCATAGATTCGAGGCCAACCCCCTTTTCA
ACTACTGTATAGATGCGATTGACCCTTGCGATTGATTGGGAGGTCTCCTA
TCGTCCCCCGAGTAGAGAGCTGGAGTATGGAATAAAGGGGAGAACTGCTG
TGCGGATATCATTTTCTAGAGCTGTAGGCTCAACTAGAGGTGCACGCAGT
ACGTGCTTACACTTTGTAGCCCCTCGGTGGCACGCGGGATGGGTTGGGAG
GATGTCGATGGATGGCACATGTAGATTATACATAGTATATTTAGAGAAAG
AAAGGAGGGAAAGGGCGAAGGGTCGACTGCATGCTGTCTGGCCGTGTGGT
AAGGAATGGCTAGAGCTAGGGACCTGACAGATTTTGCGCTTTTGTCTCTC
TCTCTTTTCTATCCCTCGCAGCAGAGGACACCCCAGCTCCTGTTGTGCCC
GAGACCCCCGTTCCTGTTGTTCCTGAGACGCCAGTTCCCGTGGTGCCCGA
AACCCCCGTTCCTGTTGTTTCTGAGACGCCAGTTCCCGTGGTACCCGAAA
CCCCAGTTCCTGCTGTTCCCGAGACACCTGTTCCCGTCGTGCCCGAAACC
CCCGTTCCTGTCGTGCTCGAGACCCTGTCTCCCGTGGTATCCGAAACCCC
AGTTCCTGTTGTTCCAGATACGACAGTTCCCGTCGTTTCCGAGACGCCAG
CTCCGAGTGTATCTGGCCGAGGGGATATCTTCACCCCATCGCCCATCGCC
ATGACGACGACGATGCGCACGGTGATGCCCGCCACTGAGTCACAGTCGAT
GCCCACGAGTAGCACCAGCACCAGCACCAGCACGGCGTGCAGCAACGGTG
TGGTCGGTCTCGAGTCGGAGGACGGCGAAGTATGTTGCGTGACCGAGTGC
GGTCAATGCGGCGGGCGGGGCTGCGCCTCGGCGGGAGGCTTGACCAATGA
CGAGTGCTGCACGGGGCAGATCGTCAGCGTGGGAGAGCTCTGTGAGGTCA
CTGGGGAGGCTCCTTGCGTCATCGGCATCGCAGGTACAGTACGCAAGCAT
GTCTCTGCGTGTAGTTTTTTTTTGGGGGAGGGAGGGGGGGGGGGGATAAA
ATGAACCCCTCCTATTTTAATCGAGGGCCTGTACATACTCGCGCGAGTAT
ATAAGAGATGCCACGTGATAACGGGTTGGACTTTGGCATGTTTGCGTGGC
ATAGCCTGAACCTGATGTGAGTTGATGTTCGGAGTAGAGCAACCAGAACC
CATTGAGAGGAAAGAGCATTAAGGGCACATTTGTTTCCTGGAATAGCGGC
ACAGCATGACCGACTCGAGGACCATTCAGTGAGATTCCTGGTCGGTTAAA
GTGCGTCGACCGATTTTTTCTTTATTATCTAGCTTTACTCTACCCCCCCC
CACCTCACCCCACCCCAGCCCACCCTATAGTTTTGTGAGATACTCTCGGC
GTACTGTCAACAGAGCATCGACAGTCAGTAAGACCACAAATAAATTGATT
GTAGAGGAGAAAATCGCCCCATGATTTGCCGCCCTCACGAAAATCTTTTG
TCCTTGAAAAGAAGCGATCACTTCCGTCGGTCATACCTAGCTATCTATCT
ATCCCTCTTATGTGTACTACTGTAGCTCTAGTAATAGCGAAAACTGACCC
CCCTTTTTTTTTTCAGGGGCTGAAACGGGGACGGGGACGAGGGGCGTACG
TTTTTCTTCCTAGAATAGTGTTCCTTGTACCACCTGTGGCATGACTTATA
GCCTCGTAATTGGGTATCACCTGTGCATGAGTATTAAACATGCTGTGACA
AAATCTAGAAGCAAACGCCCCCCCCCTCACCCCCCCCCCCCCCCCCCCCC
CCTCTCTATTTTCCATTTTCTCCTTGCTTTTTCGTTCTCAATTACGAGAT
TGCCCTTCCTATCTTCTCCACCTTTTCTCGGAGACATACCGAAAGTACGG
TATTCGGTAAATCCTGAAGGCGAGGGGAGGGATCCGTTACGTATACGTGA
CCATATTTTCTCTCTTTTTTTTTTTTTTTTTTTTTGGTATTCATCTCTTC
ATGTACAGGAGAGGAGAGGAGCCGTGTAGGTCTGTCTATATAACAGCCTA
CAACGCAAGCTTTTTGTTTATTTTCCTCTTCTCAATTCATCCAAATAAAA
AATGTTGTCCTCGTGTGGTGCCCTTTGTGCGAAATTGGTGCGGATTTTCC
TGGATCCAGGTTCGCCGACGCCCTCGGACACCATGCCCACGTGCAGCAAC
GGTCTGGTCGGCGTCGAGTCGGAGGACGGCGAGATCTGTTGCGTGGCGGA
CTGCGGGATGTGCGGTGGGGTTGGATGCGCCACGGCTGGGGAACTGACGG
GGGATGAGTGCTGCACGCAGAGGATCTTCAGCATGGGGGAGCTCTGCGAC
GTTGCCGGGGAGGCTCCTTGCATCATCACTTTTGGTGAGCGAACTTGAAG
ACGGCGGATTGATTGTACAGTAAGACGCGAAACGTTCTCCCCTCCCTCCC
CTCCCCTCCCTTGTCATCCAAACTGTCTCCTGCACCTTTCCCTTTTCACA
AATCTTCTGAGCATACGACCCCGCAGAGGGCGTCCCGGGGCAAGATTTTC
CGTCTCGGTTGAGTTTTTTTCTTCTTCGTGAGACCTTTTTCGTTACAGGA
AAGTCCCGGAAGAAAAGACGAAGTACCGGTACATGCGCGCTCTCCCCTTT
CCCCTGCATGCTGCATTTCTCACCCCTCACCCTTCACCCCACACCAACCC
CCTCGCACCCCCCGTTCTAACCTGACCTCAACATTTATTCATGTCTATAT
TGCTTTTTATTTATATTCCTACTTTTTTTTTTTTTTCTTCTTCTTTGATT
CAGTTTCGTGGTTTTTGCTCGTTTACCCTGTCATATTTTTTTGCTCGTTT
GCCCCGCCATACTTACCCCCCCCCCCCTCTCCACCCCTTTATCCCTTCGT
ATCCATAGATACCACGGGGAGCCCCACCATGTCGCCCACCATGTCGCCCA
CCATGTCGCCCACAGTTTCATCTGCGTCTCCTACATTCAGCCCTTCCGCG
GCGCCAACAGGTAACTCGCTACCCCCGCAGATTTCATTGTTCAACACCCT
AATGCCGACCATGCTAGCTAGCGCCATGGGTTTATAGCCCATCGTTGCCC
CCCCCCCCCCTCACCCCCCGCCCGCTCGGCCCCCCACCCGCCCGCCATCG
ACCTGCCCATTCATTTCTTCCCTCCGCCCCCCTCGTTTCTATTGTATATA
CTATATTATATGTTTTATTCTTATATCTACAGACATGACCGAGACCCCTA
CCATTACGCCGCCCATGTGGTCGACCACCCCCTCGGCAGCGCCCACGGGC
GACCGATCCACCGCGCCGACTTTTTTCCTCTACACATTTTCCACGGTCGA
AGCGATCGGCATTACCCCTTCGCCGCAGCAGCCTGTCCCCATGGCGACGG
TTGCTCCTAGCCCCTCCCCGACAGGGACATCACACCTTGGGGTTGGGGTA
GGGAGCTGGTCCATGCTCAACCCGACGTCCACCGACTCCGCATCAATCAC
CACCGTTTCTGCGATCATGTCACCGTCTCCGACTGGAGACTCCACATCGG
ACGGGTTGCGCGACATCTTGGGGCGTTCTGCATCTCCCTCGGCTGGTCCC
ACGGGTGGTCCCACGGCTGGTCCCACGGCTGGTCCCACGGCTGGTCCCAC
GGCTGGTCCCACGGCTGCTCCCTCGGCCGCTCCCTCGGCCGCTCCCTCGG
CCGCTTCCTCGGCCGCTCCCTCGGCCGCGCCCAGTTCGTTTGGCGCCGAG
ATTGATTCGCCGAACCAGACCGCCCCGGAGAACAGCAGCAGCCGCGGAAT
ATCGTCGGCAGCTGGTTGGCCTATGGTTTCGGCGTTCAGTGCTGCCTTTG
GGGCTTTCTTCATCGCCGCGTGGTGGTAATATAAGATGCATAGATGTGAT
GTACATACACAAGTATGAGTGTACGAGAGGCACATTTCCCTCGCTGTTTT
CTTGGCGTCCGTGTGAAGGAAAGCAACATTTTGTGGAATGTCTCGTGTGT
ACGCAGCGCAGCACCACACCACACCCATGCAGTTTTTTGTTTTGTTCTTT
TCTGTTTTGTTTTTCGTCGCCAAAATAGCGTGCGCGAGGGCGATTGACGT
TTTCACATTGCTGTGATCCAGTCGAGGCGCTGATGCCTCGTTTCCTGGCG
ATGAGGATGATGGGAGGGAGTGAAAATCTTAACCATTACTCCGCTTATAT
TTATTTTTCCTTGTTGTTTTTTTTTTTTTTTTTTTCCAAAGCGCATGTTT
TTTGCGCAAATTCATCGGTCGCTGCTCTTCCCCTTTATGCGAAACGGGGT
GATAAACGAGAT back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1024:232145..242056- >mRNA_F-serratus_M_contig1024.317.1 ID=mRNA_F-serratus_M_contig1024.317.1|Name=mRNA_F-serratus_M_contig1024.317.1|organism=Fucus serratus male|type=CDS|length=2514bp|location=Sequence derived from alignment at F-serratus_M_contig1024:232145..242056- (Fucus serratus male) ATGACGACGACGATGCGCACGGTGATGCCCGCCACTGAGTCACAGTCGAT GCCCACGAGTAGCACCAGCACCAGCACCAGCACGGCGTGCAGCAACGGTG TGGTCGGTCTCGAGTCGGAGGACGGCGAAGTATGTTGCGTGACCGAGTGC GGTCAATGCGGCGGGCGGGGCTGCGCCTCGGCGGGAGGCTTGACCAATGA CGAGTGCTGCACGGGGCAGATCGTCAGCGTGGGAGAGCTCTGTGAGGTCA CTGGGGAGGCTCCTTGCGTCATCGGCATCGCAGATGACGACGACGATGCG CACGGTGATGCCCGCCACTGAGTCACAGTCGATGCCCACGAGTAGCACCA GCACCAGCACCAGCACGGCGTGCAGCAACGGTGTGGTCGGTCTCGAGTCG GAGGACGGCGAAGTATGTTGCGTGACCGAGTGCGGTCAATGCGGCGGGCG GGGCTGCGCCTCGGCGGGAGGCTTGACCAATGACGAGTGCTGCACGGGGC AGATCGTCAGCGTGGGAGAGCTCTGTGAGGTCACTGGGGAGGCTCCTTGC GTCATCGGCATCGCAGGTTCGCCGACGCCCTCGGACACCATGCCCACGTG CAGCAACGGTCTGGTCGGCGTCGAGTCGGAGGACGGCGAGATCTGTTGCG TGGCGGACTGCGGGATGTGCGGTGGGGTTGGATGCGCCACGGCTGGGGAA CTGACGGGGGATGAGTGCTGCACGCAGAGGATCTTCAGCATGGGGGAGCT CTGCGACGTTGCCGGGGAGGCTCCTTGCATCATCACTTTTGGTTCGCCGA CGCCCTCGGACACCATGCCCACGTGCAGCAACGGTCTGGTCGGCGTCGAG TCGGAGGACGGCGAGATCTGTTGCGTGGCGGACTGCGGGATGTGCGGTGG GGTTGGATGCGCCACGGCTGGGGAACTGACGGGGGATGAGTGCTGCACGC AGAGGATCTTCAGCATGGGGGAGCTCTGCGACGTTGCCGGGGAGGCTCCT TGCATCATCACTTTTGATACCACGGGGAGCCCCACCATGTCGCCCACCAT GTCGCCCACCATGTCGCCCACAGTTTCATCTGCGTCTCCTACATTCAGCC CTTCCGCGGCGCCAACAGATACCACGGGGAGCCCCACCATGTCGCCCACC ATGTCGCCCACCATGTCGCCCACAGTTTCATCTGCGTCTCCTACATTCAG CCCTTCCGCGGCGCCAACAGACATGACCGAGACCCCTACCATTACGCCGC CCATGTGGTCGACCACCCCCTCGGCAGCGCCCACGGGCGACCGATCCACC GCGCCGACTTTTTTCCTCTACACATTTTCCACGGTCGAAGCGATCGGCAT TACCCCTTCGCCGCAGCAGCCTGTCCCCATGGCGACGGTTGCTCCTAGCC CCTCCCCGACAGGGACATCACACCTTGGGGTTGGGGTAGGGAGCTGGTCC ATGCTCAACCCGACGTCCACCGACTCCGCATCAATCACCACCGTTTCTGC GATCATGTCACCGTCTCCGACTGGAGACTCCACATCGGACGGGTTGCGCG ACATCTTGGGGCGTTCTGCATCTCCCTCGGCTGGTCCCACGGGTGGTCCC ACGGCTGGTCCCACGGCTGGTCCCACGGCTGGTCCCACGGCTGGTCCCAC GGCTGCTCCCTCGGCCGCTCCCTCGGCCGCTCCCTCGGCCGCTTCCTCGG CCGCTCCCTCGGCCGCGCCCAGTTCGTTTGGCGCCGAGATTGATTCGCCG AACCAGACCGCCCCGGAGAACAGCAGCAGCCGCGGAATATCGTCGGCAGC TGGTTGGCCTATGGTTTCGGCGTTCAGTGCTGCCTTTGGGGCTTTCTTCA TCGCCGCGTGGTGGTAAACATGACCGAGACCCCTACCATTACGCCGCCCA TGTGGTCGACCACCCCCTCGGCAGCGCCCACGGGCGACCGATCCACCGCG CCGACTTTTTTCCTCTACACATTTTCCACGGTCGAAGCGATCGGCATTAC CCCTTCGCCGCAGCAGCCTGTCCCCATGGCGACGGTTGCTCCTAGCCCCT CCCCGACAGGGACATCACACCTTGGGGTTGGGGTAGGGAGCTGGTCCATG CTCAACCCGACGTCCACCGACTCCGCATCAATCACCACCGTTTCTGCGAT CATGTCACCGTCTCCGACTGGAGACTCCACATCGGACGGGTTGCGCGACA TCTTGGGGCGTTCTGCATCTCCCTCGGCTGGTCCCACGGGTGGTCCCACG GCTGGTCCCACGGCTGGTCCCACGGCTGGTCCCACGGCTGGTCCCACGGC TGCTCCCTCGGCCGCTCCCTCGGCCGCTCCCTCGGCCGCTTCCTCGGCCG CTCCCTCGGCCGCGCCCAGTTCGTTTGGCGCCGAGATTGATTCGCCGAAC CAGACCGCCCCGGAGAACAGCAGCAGCCGCGGAATATCGTCGGCAGCTGG TTGGCCTATGGTTTCGGCGTTCAGTGCTGCCTTTGGGGCTTTCTTCATCG CCGCGTGGTGGTAA back to top
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