mRNA_F-serratus_M_contig1023.315.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1023.315.1 vs. uniprot
Match: A0A7S2ME85_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ME85_9STRA) HSP 1 Score: 343 bits (880), Expect = 1.280e-106 Identity = 220/617 (35.66%), Postives = 314/617 (50.89%), Query Frame = 1
Query: 25 DLSPSSHDDADTILGFTCSNEYPAVTHTK------WTHLAEPYKETTLTASSKIGDPTNDVFVWRVWD------DKNTVLEGRELTYVFKTVGRQRVTLSQTVVTTGNTYYMEAYVMVKYVRREIRQLTGKDREAFLNAMEAIYRLPTAQGRAIYGKEYRGIEYFVQMHLDGAGVIECDHWHDDAGIMTHHVGFTLLFEQGLQVVDPSVSIPYWSYTIESALGYDSYGESEIFAPDWFGDASPDNALHTVDNGRFAYLPVLEHAEEYDYIHNAYGLLRTPWNLDSTPFVTRNNATNG--EVTTDMVTCEIYSTSFDTSTLKTMNTWLNGGTHGPVHILLGGAWNNPEELFLQS---------SDISGIAVLMAKYLWRKGYLRLPAACNKEVNSAGDASTCRATCPAELYESRGMTPYDVLMDVHALMWAAVEKVVVSYIMTSDRFYVVGHEDDEDFQTAF---WAKMLKSLCDPGHVGDMFTSAAPYDPIFWVIHPEADRYLSWRRILGRKGIEGYEFD-----ETWGYYHGKYTTGDTGTVCDWSAVRPDTLDMPSCLKK-TCGGHYATDTLPFEIKIKGEVRKMTNIQWLEFIYPETEDLPYLYNEY-QWDHCA 1776
DL+ S DD I+ SN Y K W H A+ Y++T + +S D D F R WD G + +F G V L++T T +Y E VM K+VR EIR L+ +DR AF NA+ A+Y G A YG ++R IEY V+ HL GA +CDHWHDDAGI+THH+ FTL EQGLQ + P+++IPYW YTI+S + S IF WFG ASPDN H + GR+AY VL++A++Y ++HN YG+LR+PWN + F+TR+ T G + + C ++ + + + LNG HGP+HI++GG W + + S S +S +L +K+LWR+GY+R P C+ + ++ + C + P+E+ +K + + ++ F +G + F A + +L L GH G+MFTSAAPYDP FW +H A+R++ RI YEFD ETWGY H + DT VCDW + +MP C+K TC GH + D LP G TN+++ EF P +DLPY Y+ + W C+
Sbjct: 10 DLAFDSTDDVPAII---VSNAYERAKGHKVGDGIFWQHFAQRYRDTRIETTST-NDCAADNFGQR-WDIIRPDSTYGGTFYGSPVEVMFADHGHHTVKLTETCGDTTTSY--EYDVMSKHVRYEIRSLSNEDRNAFFNALHAVYNTNQKDGVAKYGAKFRSIEYLVREHLYGAASKDCDHWHDDAGILTHHMAFTLELEQGLQTIQPNITIPYWDYTIDS-YSVSDFVNSPIFYDSWFGAASPDNDEHIITKGRWAYQSVLKNAQDYSHVHNPYGVLRSPWNTNPIGFITRSRYTLGVKDGGWTIPACMDFNEVSNFDWIGDYFSALNGELHGPIHIMIGGHWFYDDHSYNISKGLAATSSGSQLSDGFLLASKFLWRQGYIRCPDFCSADTST----TDCSCSIPSEIQG---------------------DKDAYTILESTGIFNSIGTFEQPAFLNAMGTTYQGLLDFLGHVGHPGEMFTSAAPYDPTFWPLHGVAERFMGMARIAS------YEFDIIDLNETWGYRHSDVMS-DTHVVCDWDGLTG--TEMPDCVKGVTCSGHKSDDLLPMG-DFLGSGETYTNMEFYEFSAPWNDDLPYTYDTFFDWPACS 583
BLAST of mRNA_F-serratus_M_contig1023.315.1 vs. uniprot
Match: F0Y635_AURAN (Myb-like domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y635_AURAN) HSP 1 Score: 344 bits (883), Expect = 1.590e-103 Identity = 209/551 (37.93%), Postives = 298/551 (54.08%), Query Frame = 1
Query: 232 GRELTYVFKTVGRQRVTLSQTVVTTGNT---YYMEAYVMVKYVRREIRQLTGKDREAFLNAMEAIYRLPTAQGRAIYGKEYRGIEYFVQMHLDGAGVIECDHWHDDAGIMTHHVGFTLLFEQGLQVVDPSVSIPYWSYTIES--------ALGYDSYG----ESEIFAPDWFGDASPDNALHTVDNG-RFAYLPVL---EHAEEYDYIHNAYGLLRTPWNLDSTPFVTRNNATNG-EVTTDMVTCEIYSTSF-DTSTLKTMNTWLNGGTHGPVHILLGGAWNNPEEL------FLQSSDISGIA------VLMAKYLWRKGYLRLPAACNKEVNSAGDAS-TCRATCPAELYESRGMTPYDVLMDVHALMWAAVEKVVVSYIMTSDRFYVVGHEDDEDFQTAFWAK--MLKSLCDPGHVGDMFTSAAPYDPIFWVIHPEADRYLSWRRILGRKGIEGYEFDETWGYYHGKYTTGDTGTVCDWSAVRPDTLDMPSCLKKTCGGHYATDTLPFEIKIKGEVRKMTNIQWLEFIYPETEDLPYLYNEY-QWDHC 1773
G +T +F+T G + VT+S V TT +++E V V+YVR EIR L+ DR FL+A+ A+Y G+++YG ++R Y V+ HL G G ECDHWHDDAGI+THH+ FTL EQ LQ VD SVS+PYW Y+ ++ G D G ES I+ DWFG ++ + VD G RF+YLPV+ + A +Y I N+YG+LR+PWN + P+++R+ A G + TT + C + +F DT+T+ + NG HGPVHIL GG W + ++ ++D IA +L +K+LWR+GYLR P +C A DA+ +C +CP EL S+ + + G + A W + +L ++C GHVGD +TSAAP DPIFWV+H ++R++ ++RIL +G DETW Y+H DT VCDWS V D++++P+C TC GH D LPF G TN Q+ +FI P +LPY Y+ + W C
Sbjct: 437 GSRVTMIFETHGTRNVTVSMRVATTRGEELGFHVELAVTVRYVRHEIRSLSVDDRSRFLDALSAVYATGDDLGKSVYGDKFRSSHYLVRKHLLGGGGKECDHWHDDAGIVTHHIAFTLELEQSLQSVDASVSVPYWDYSYDAYYYNASKQTCGADCIGGDWTESIIWDDDWFGPIPNASSNYVVDGGGRFSYLPVMTASQGARDYSTITNSYGMLRSPWNQNPVPYLSRSRAIFGVDDTTSLPDCSAFYWAFNDTTTIGRLFEQFNGQLHGPVHILTGGIWGFDAQFETSIQKWMANAD-GAIAKQSLQSILSSKWLWRQGYLRCPDSC------AADATESCTCSCPEELR---------------------------SHWTVEEFWNATGLDAVAGADLASWPRETLLDAICHVGHVGDSWTSAAPLDPIFWVLHGLSERFVGFKRILAHEGYT--HLDETWKYHHSMDVPSDTHYVCDWSGVG-DSMELPTCTPGTCAGHKEDDLLPFG-DFLGVGDTYTNRQFWDFISPYNTELPYTYDSFTNWPAC 949
BLAST of mRNA_F-serratus_M_contig1023.315.1 vs. uniprot
Match: F0XYV7_AURAN (GRIP domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYV7_AURAN) HSP 1 Score: 348 bits (894), Expect = 1.250e-102 Identity = 209/540 (38.70%), Postives = 284/540 (52.59%), Query Frame = 1
Query: 211 DKNTVLEGRELTYVFKTVGRQRVTLSQTVVTTGNTYYMEAYVMVKYVRREIRQLTGKDREAFLNAMEAIYRLPTAQGRAIYGKEYRGIEYFVQMHLDGAGVIECDHWHDDAGIMTHHVGFTLLFEQGLQVVDPSVSIPYWSYTIESA-LGYDSYGESEIFAPDWFGDASPDNALHTVDNGRFAYLPVLEHAEEYD--YIHNAYGLLRTPWNLDSTPFVTRNNATNGEVTTDMVT--CEIYSTSFDTSTLKTMNTWLNGGTHGPVHILLGGAWNNPEELFLQSS--------DISGIAVLMAKYLWRKGYLRLPAACNKEVNSAGDASTCRATCPAELYESRGMTPYDVLMDVHALM----WAAVEKVVVSYIMTSDRFYVVGHEDDEDFQTAFWAKMLKSLCDPGHVGDMFTSAAPYDPIFWVIHPEADRYLSWRRILGRKGIEGYEFDETWGYYHGKYTTGDTGTVCDWSAVRPDTLDMPSCLKKTCGGHYATDTLPF-EIKIKGEVRKMTNIQWLEFIYPETEDLPYLYNEYQ-WDHC 1773
D N V G + VF G +TLS V +G + V YVRREIR LT REAFL+A+E Y++ G +YG +Y+ + V++HL GA CDHWHDDAGI+THH+GFTL EQ LQ +D +V++PYW YT ++ LG D +S+IF PDW G SP H VD GR+AY V ++ ++ D I N YGLLR+PWN D TPF+TR G C + T++ + + LNG HGPVHI++GG W+ F + + SG +L +K+LWR+G++R P C+ + + C TCP E+ E+ PY+V+ L W +E + + Y D D W M LC GH G+MFTSAAPYDP FW +H A+R+LS++R+ G +ETWGY H DT VCDW+ V + + +P+C ++TC GH D LPF K E TN ++ F P EDLPY Y+ W C
Sbjct: 116 DANRVGAG-SVEVVFTAPGLHTLTLSSRV--SGEVLETKT-VKATYVRREIRTLTDAAREAFLSALETTYKVDQKDGERLYGSKYKSMASLVELHLQGAASKTCDHWHDDAGILTHHMGFTLQLEQSLQAIDNTVAMPYWDYTADAYYLGIDEIHKSQIFQPDWLGAISPKGEDHVVDEGRWAYTAVHKYPKDSDRDLIRNPYGLLRSPWNTDKTPFITRYKDVLGVRGGGFSVPGCSDFKTTYKKDWIGDFFSDLNGALHGPVHIIIGGQWDFDASRFNLTMLDEESGMPEASGFFLLSSKFLWRQGFVRCPEFCSDDTGN----QDCECTCPREITEN--WKPYEVMQATGQLDLNNGW--LEPLYLLY-------------SDMD-----WKDMWHILCHVGHAGEMFTSAAPYDPTFWPLHGLAERFLSYKRVQAAAGET--TLNETWGYTHMGALASDTDVVCDWTGV--EGMGLPTCTRQTCAGHKKDDLLPFGNFLDKNET--YTNEEFYRFTAPTNEDLPYAYDSLSSWPAC 619
BLAST of mRNA_F-serratus_M_contig1023.315.1 vs. uniprot
Match: A0A835Z8Z2_9STRA (Tyrosinase-like protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z2_9STRA) HSP 1 Score: 324 bits (831), Expect = 2.500e-99 Identity = 197/584 (33.73%), Postives = 298/584 (51.03%), Query Frame = 1
Query: 112 WTHLAEPYKETTLTASSKIGDPTNDVFVWRVWDDKNTVLEGRELTYVFKTVGRQRVTLSQ----------TVVTTGNTYYMEAYVMVKYVRREIRQLTGKDREAFLNAMEAIYRLPTAQGRAIYGKEYRGIEYFVQMHLDGAGVIECDHWHDDAGIMTHHVGFTLLFEQGLQVVDPSVSIPYWSYTIESALGYD--SYGESEIFAPDWFGDASPDNALHTVDNGRFAYLPVLEHAEEYDYIHNAYGLLRTPWNLDSTPFVTRNNATNG-EVTTDMVTCEIYSTSFDTSTLKTMNTWLNGGTHGPVHILLGGAWNNPEELFLQSSDISGI------AVLMAKYLWRKGYLRLPAACNKEVNSAGDASTCRATCPAELYESRGMTPYDVLMDVHALMWAA---VEKVVVSYIMTSD---RFYVVGHEDDEDFQTAFWAKMLKSLCDPGHVGDMFTSAAPYDPIFWVIHPEADRYLSWRRILGRKGIEGYEFDETWGYYHGKYTTGDTGTVCDWSAVRPDTLDMPSCLKKTCGGHYATDTLPFEIKI---KGEVRKM-TNIQWLEFIYPETEDLPYLYNEYQWDHCA 1776
W ++AEPYK TT + ++D +R D + G+ VF T+G +T+ T+++T T V+VKYVRREIRQL +DREAF +A+ + R+PT G+ +YG +Y +Y V+MHL G +CDHWH G +T H+ +TL+FE+ LQ V+PSVS+PYW +T+ES Y+ ++ +S +F+ DWFG+ASPDN LHT + GRFAY+P + +A E+ ++N+YGLLR PWN D TPF+TR+ G + C Y+ + LN HG +H +GG+WN+ + +SD A ++K +WR GYL C+ + ASTC C + +G PYDVL++ L A ++S + D + + G+ ++E + +L +LC+PGH+GDMF + + D FWV+HP DR + R+ ++ETW DT T C GH TD PF+ G R TN + + ++P ++ +PY+Y ++ WDHC
Sbjct: 91 WDYIAEPYKVTTFELVDEDLPDSSDSLDYRWILDGHLQGVGKSTQAVFTTIGNYTMTVEAFWPGVDADLATLLSTNIT------VVVKYVRREIRQLIDQDREAFFSAVSVLQRVPTRVGQRLYGSDYYSKDYLVRMHLYFGGTADCDHWHQGPGFVTSHMAYTLMFEKALQAVNPSVSVPYWDFTLESTF-YEPATWRDSPVFSGDWFGEASPDNDLHTPNKGRFAYVPTMNNAREFSKVYNSYGLLRAPWNADPTPFMTRSKKVYGLDNNMKPSGCLEYAKVIRMGNWMDLARQLNSAAHGHIHETVGGSWNHAFGSEVNASDTIYSFAHQIQASALSKDVWRAGYLLCADGCDPSL----PASTCECECSED--SMQGQDPYDVLLNSGVLATALYFDTNGTLISSFVAEDGEVHYQLEGYTEEES--AVIYQDLLTTLCNPGHIGDMFQATSSNDITFWVLHPTMDRLWHYVRLTNASS-----YNETW---------EDTAT---------------------CYGHNPTDIQPFKGLFGDSDGSGRDYYTNAELYDALHPASDAMPYVYADFNWDHCT 624
BLAST of mRNA_F-serratus_M_contig1023.315.1 vs. uniprot
Match: A0A6C0KH90_9ZZZZ (Tyrosinase_Cu-bd domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KH90_9ZZZZ) HSP 1 Score: 323 bits (829), Expect = 1.270e-98 Identity = 213/622 (34.24%), Postives = 312/622 (50.16%), Query Frame = 1
Query: 40 SHDDADTILGFTCSNEYPAVT---HTKWTHLAEPYKETTLTASS-KIGDPTNDVFVWRV-WDDKNTVLEGRELTYVFKTVGRQRVTLSQT------VVTT------GNTYYMEAYVM-VKYVRREIRQLTGKDREAFLNAMEAIYRLPTAQGRAIYGKEYRGIEYFVQMHLDGAGVIECDHWHDDAGIMTHHVGFTLLFEQGLQVVDPSVSIPYWSYTIESALGYDSYGESEIFAPDWFGDASPDNALHTV-DNGRFAYLPVLEHAEEYD------------YIHNAYGLLRTPWNLDSTPFVTRNNATNGEVTT-DMVTCEIYSTSFDTSTLKTMNTWLNGGTHGPVHILLGGAW------NNPEELFLQSSDISGIAVLMAKYLWRKGYLRLPAACNKEVNSAGDASTCRATCPAELYESRGMTPYDVLMDVHALMWAAVEKVVVSYIMTSDRFYVVGHEDDEDFQTAFWAKMLKSLCDPGHVGDMFTSAAPYDPIFWVIHPEADRYLSWRRILGRKGIEGYEFDETWGYYHGKYTTGDT--GTVCDWSAVRPD-TLDMPSCLKKT-CGGHYATDTLPFEIKIK-GEVRKMTNIQWLEFIYPETEDLPYLYNEYQWDHCA 1776
+ +D TI S +Y +T W + EP++ + S +GD DV ++ V WD G ++ + G T++ T ++ T T Y + + VKYVRREIR LT DRE + +A+E IY L G++IYG ++ EYF HL GAG +CDHWHD AGI+THH+ FTL FEQ LQ V P V+ YW Y +++ L YD++ ES IF DWFG++SP N H + D G++A + V + + Y Y+ NA+G +R+PWN + + R+N T G M TC+ + F + +L +N NG THGPVHIL+GGAW ++P+ +Q D +L K LWR GY R P +C S C+ + P + ++ G YI+ Y ++ E+ + K+L+++ DPG G+MF+SAA DP FW +H + +R L +RI+ +G FDETW + +G VCDWS V L +P+C T C GH A D L F + G+ TN ++ +FI+P T DLPY Y+ + +D+CA
Sbjct: 62 AENDVFTITMSASSPDYGILTTLADLPWDMVLEPHRTQNVAIDSFLLGDKEMDVALYTVTWDFAGQAYSGSDIQVMLNNTGVYNCTITITQNPGRRLINTLSPSLSSPTAYTQTFTAAVKYVRREIRSLTDADRELYFDALEQIYSLDETTGQSIYGSKFHSAEYFSYKHLSGAGTSDCDHWHDGAGIITHHMAFTLEFEQSLQSVHPEVAAAYWEYGMDTYL-YDTWSESPIFWADWFGESSPTNKNHAINDGGKWAGITVPD-GDPYTLWSIPDTGSLNPYV-NAFGHMRSPWNNNPVKALGRHNQTYGMTQYGSMPTCQTLQSCFQSDSLADINDCSNGATHGPVHILIGGAWGDGNLFDDPDISMVQKPD----KLLFFKVLWRMGYTRCPDSCEL-------GSLCKCSVPQQYIDTYG----------------------AEYILKDTNVYYALEKELENADDELFLKVLRAVEDPGIAGEMFSSAAAIDPSFWPLHGQIERLLGAKRIMISQGTI-TNFDETWAFTEYNKASGAAYLNGVCDWSKVAGSGDLTLPTCTMDTICSGHLANDVLEFSGFLNTGDT--YTNQEFYDFIHPWTNDLPYTYDTWDFDYCA 644 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1023.315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1023.315.1 >prot_F-serratus_M_contig1023.315.1 ID=prot_F-serratus_M_contig1023.315.1|Name=mRNA_F-serratus_M_contig1023.315.1|organism=Fucus serratus male|type=polypeptide|length=593bp APRGLENHDLSPSSHDDADTILGFTCSNEYPAVTHTKWTHLAEPYKETTLback to top mRNA from alignment at F-serratus_M_contig1023:290612..297894+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1023.315.1 ID=mRNA_F-serratus_M_contig1023.315.1|Name=mRNA_F-serratus_M_contig1023.315.1|organism=Fucus serratus male|type=mRNA|length=7283bp|location=Sequence derived from alignment at F-serratus_M_contig1023:290612..297894+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1023:290612..297894+ >mRNA_F-serratus_M_contig1023.315.1 ID=mRNA_F-serratus_M_contig1023.315.1|Name=mRNA_F-serratus_M_contig1023.315.1|organism=Fucus serratus male|type=CDS|length=3558bp|location=Sequence derived from alignment at F-serratus_M_contig1023:290612..297894+ (Fucus serratus male)back to top |