mRNA_F-serratus_M_contig1022.310.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1022.310.1
Unique NamemRNA_F-serratus_M_contig1022.310.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1022.310.1 vs. uniprot
Match: A0A3M1WRI4_9BACT (M28 family peptidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M1WRI4_9BACT)

HSP 1 Score: 493 bits (1268), Expect = 4.070e-156
Identity = 278/604 (46.03%), Postives = 356/604 (58.94%), Query Frame = 1
Query:    1 YSPSGNVSAAFVYANYGRPEDFDALEAVGVSVEGKIVITRYGKCFRGLKAMNAQNRGAVGTIIYSDPQQDGFTKGPAYPDGAWRPASSVQRGSVQFNSLCAGDPSRAASDKTVE-EVCGFSQDELVPLIPVMPISYGDAEPFLRALGGPAGPEGFQGGLDFSYTVGPSSAVARMMVENEKHVGPIWNVVGTISGTLPEAEDRPVVLGNHRDAWVYGAVDPNSGTAALIELARGLGVLLGGGWRPLRTIILCSWSGEELGMIGSTAWGEANAEGILAKAAAYLNVDSAVSGSYLSIKATPTLAGLIEGALGDVEDPASGGTLLDAW-----------------SGQLQMLGSGSDYAVFLDRLGIASVDFSFKQNAAGYAVYHSVYDSFSWVENYGDPGFRYFQASARFWGLMALRLASPEVLPFDPRRQATALEEYLAALTPPPPSDGERGASLSLSEDDLAPLARAIAAFRTAADEIGRSIAAAVLEGIPVEAAKEARAVMLRGAGGVTGRKEGDRAGATGLTAEDLNERLAMTERRFLSPEGLPGRPWYRHVLQAPGLYLGYAAEPFPGITQALRDGDKALARAQVLVAAGCVTDAADFLSG 1758
            Y+ SG+V+A  VY NYG PED++ L+ + + V GKIV+ RYG  FRG+KAM A+  GA+G ++YSDP  DG+ KG  YP G WRPASSVQRGSVQ+ S+  GDP       T E +     + + +P IPV P+SY DA+P LRALGG + P+G+QGGL F+Y  GP  AV  +  E E  V PIWNV+G I G      DR V+LGNHRDAWV+GAVDPNSG+AAL+E+ARG G LL  GWRP RTIIL SW GEE G++GST W E +A+ + A+A AY+N+DSA SG      A+P+LA LI     +V DPA+G ++ +AW                   ++  LGSGSDY  FL  LGIA+ D  F+ +   Y VYHS+YDSF W+E +GDP F Y +A+A+ WGL+ LRLA   +LPFD       L+  L  L  P     E          D+APL RAI  F  AA  +   +                              +   R+  T      LN+RL +TER F+  EGLP RPWY+HV+ APGLY GYAA  FPG+ +AL D +   ARA +   A  + DAA  L G
Sbjct:  536 YAASGDVTAELVYVNYGLPEDYETLKKLDIDVHGKIVMARYGHSFRGIKAMVAEQHGAIGLLLYSDPADDGYVKGDVYPQGPWRPASSVQRGSVQYLSIYPGDPLTPGVAATTEAKRLAVEEAKNIPHIPVQPLSYRDAQPLLRALGGHSAPQGWQGGLPFTYHTGPGPAVVHLETEMEFQVRPIWNVIGRIEGQ--REPDRLVILGNHRDAWVFGAVDPNSGSAALLEVARGFGELLKRGWRPRRTIILASWDGEEFGLLGSTEWVEHHAQMLRAQAVAYINLDSATSGHRFGASASPSLARLIRDVTREVTDPATGKSVYEAWRQAQRTSRSQEATTDLTEPRVGPLGSGSDYTPFLQHLGIAAADIRFRGD---YGVYHSIYDSFHWMEKFGDPTFAYHRAAAQIWGLIVLRLADSPILPFDYTEYGRELKRALQGLNLPADEHHEL---------DVAPLRRAIDLFEAAAMIVQAEV------------------------------RRATRSSTTEQMRRSLNDRLMLTERAFIDTEGLPRRPWYKHVVYAPGLYAGYAARVFPGLAEALEDRNWPEARAHINRLARLIEDAALTLVG 1095          
BLAST of mRNA_F-serratus_M_contig1022.310.1 vs. uniprot
Match: A0A7S3LRD1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRD1_9STRA)

HSP 1 Score: 473 bits (1218), Expect = 1.890e-154
Identity = 259/574 (45.12%), Postives = 329/574 (57.32%), Query Frame = 1
Query:    1 YSPSGNV-SAAFVYANYGRPEDFDALEAVGVSVEGKIVITRYGKCFRGLKAMNAQNRGAVGTIIYSDPQQDGFTKGPAYPDGAWRPASSVQRGSVQFNSLCAGDPSRAASDKTVEEVCGFSQDELVPLIPVMPISYGDAEPFLRALGGPAGPEGFQGGLD--FSYTVGPSSAVARMMVENEKHVGPIWNVVGTISGTLPEAEDRPVVLGNHRDAWVYGAVDPNSGTAALIELARGLGVLLGGGWRPLRTIILCSWSGEELGMIGSTAWGEANAEGILAKAAAYLNVDSAVSGSYLSIKATPTLAGLIEGALGDVEDPASGGTLLDAWSGQLQMLGSGSDYAVFLDRLGIASVDFSFKQ-NAAGYAVYHSVYDSFSWVENYGDPGFRYFQASARFWGLMALRLASPEVLPFDPRRQATALEEYLAALTPPPPSDGERGASLSLSEDDLAPLARAIAAFRTAADEIGRSIAAAVLEGIPVEAAKEARAVMLRGAGGVTGRKEGDRAGATGLTAEDLNERLAMTERRFLSPEGLPGRPWYRHVLQAPGLYLGYAAEPFPGITQALRDGDKALARAQV 1710
            Y+PSG V +   VYANYG+PEDFD LE+ G+ V GK+VI RYGKCFRGLK MNAQ RGA+G ++YSDP  DG+  G  YPDG WRP +SVQRGS QFNSLC GDP RA S+ T E++CG+  +E++P IP +PISY DA P L +L G   P  + GGL     Y  GPS     +   N   V PIWNV+ TI GTLP+  D+PVVLGNHRDAWVYGA DPNSG+  ++E+ R  G L+  GW+P RTII+ SWSGEE G++GST WGE  A  +L  A  Y+NVD  VSG   +  AT +L   +    G V+DP +   L D W  QL  LGSGSDY VFLD LGIAS D  F   N   Y  YHS+YDS++W+E   DP   Y    ++  GL+AL  A  +VLP + + +A A+ +Y+                                      DE         LEG+ +    E R  +             D      +  +  N  L + ER  L  EGLP R W++H+LQAPGLYLGY  E FPGI QA  + +  + + ++
Sbjct:   72 YTPSGEVLNKKLVYANYGKPEDFDVLESEGIDVMGKVVIVRYGKCFRGLKIMNAQRRGAIGLLLYSDPLDDGYRVGKVYPDGPWRPETSVQRGSAQFNSLCPGDPQRAHSEATTEQLCGYKPNEVIPSIPAIPISYHDAIPLLLSLQGDEVPPDWVGGLTDKLVYRFGPSKGTVSLGTNNTFKVTPIWNVITTIKGTLPKELDQPVVLGNHRDAWVYGAADPNSGSTVMLEVGRAFGKLVQSGWKPKRTIIIASWSGEEYGLVGSTGWGEEYANTLLKNATVYINVDVGVSGKTFASAATHSLGRELLKVAGKVKDPETQKPLSDVWDKQLGTLGSGSDYTVFLDNLGIASYDLRFMPFNKQPYGTYHSIYDSYTWIETQADPTLEYHVLLSQVVGLLALDFADLDVLPIELQDEAQAISQYV--------------------------------------DE---------LEGMHIHGLDELRKAVKELEKSAVAFARNDE-----VDNQQKNRILGLFERNLLDKEGLPKRKWFKHILQAPGLYLGYEPEVFPGIQQAFSEKNNTMLQQEI 593          
BLAST of mRNA_F-serratus_M_contig1022.310.1 vs. uniprot
Match: A0A2V8TMK1_9BACT (Aminopeptidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8TMK1_9BACT)

HSP 1 Score: 462 bits (1190), Expect = 1.120e-147
Identity = 271/595 (45.55%), Postives = 334/595 (56.13%), Query Frame = 1
Query:    1 YSPSGNVSAAFVYANYGRPEDFDALEAVGVSVEGKIVITRYGKCFRGLKAMNAQNRGAVGTIIYSDPQQDGFTKGPAYPDGAWRPASSVQRGSVQFNSLCAGDPSRAASDKTVEEV-CGFSQDELVPLIPVMPISYGDAEPFLRALGGPAGPEGFQGGLDFSYTVGPSSAVARMMVENEKHVGPIWNVVGTISGTLPEAEDRPVVLGNHRDAWVYGAVDPNSGTAALIELARGLGVLLGGGWRPLRTIILCSWSGEELGMIGSTAWGEANAEGILAKAAAYLNVDSAVSGSYLSIKATPTLAGLIEGALGDVEDPASGGTLLDAWSGQ-----------------------LQMLGSGSDYAVFLDRLGIASVDFSFKQNAAGYAVYHSVYDSFSWVENYGDPGFRYFQASARFWGLMALRLASPEVLPFDPRRQATALEEYLAALTPPPPSDGERGASLSLSED-------DLAPLARAIAAFRTAADEIGRSIAAAVLEGIPVEAAKEARAVMLRGAGGVTGRKEGDRAGATGLTAEDLNERLAMTERRFLSPEGLPGRPWYRHVLQAPGLYLGYAAEPFPGITQALRDGDKA 1692
            Y  SG  S   VYANYGR EDF+ LE +GV+V G+IV+ RYG+ FRGLK   AQ RGA G I+YSDP  DG+ KG  YP+G WRP S++QRGSVQF S+  GDP       T   V     + E +P IP +PISYG+A P L++L G   P G+QGGL F+Y +GP  A   M VE +  V PIWNV+ TI G   E  DR VV GNHRDAW YGAVDPNSGTA ++E+ARGLG  L  GW+P R +IL SW GEE G++GST W E  AE + AK  AY+NVDSAVSG        PTL  LI      +E+P  G  LL+ W  +                       L  +GSGSDY  FLD  GI   D  F   +  Y VYHS++D   W+E +GDP F Y   +A+  GLMA+RL+  E+LPF     A  +E YL  L         R A  SL++        D  PL  AIAAFRTAA+ +  ++     EG P++AA+  R                            +N+ LA  ER FL P GL GR W+RH+L APGL  GYA  PFPGI QA+ + D A
Sbjct:  232 YGASGRASGQVVYANYGRKEDFEKLEEMGVAVRGRIVLARYGENFRGLKVREAQQRGAAGVILYSDPADDGYAKGDVYPEGPWRPESAIQRGSVQFLSIGPGDPQTPGRASTKSAVRIPIEKLETIPRIPSLPISYGEAAPVLKSLAGQNAPSGWQGGLPFAYHIGPGPAQIEMAVEMDYAVRPIWNVITTIPGA--EEPDRWVVFGNHRDAWTYGAVDPNSGTAVMLEMARGLGEALKAGWKPRRKLILASWDGEEYGLVGSTEWVENLAEELGAKGVAYINVDSAVSGPDFGAAGVPTLRDLIVSVASCLEEPRKGRPLLEIWRSKRQEEWAEQEPLCTDAQAPAFYLNLDPVGSGSDYTAFLDFAGIPVADLHF---SGSYGVYHSMFDDLYWMEKFGDPEFLYHTLAAKICGLMAMRLSGAEILPFRFSPYARGMETYLRELQRLV-LKRLRAAEASLNKPEKPPINPDFKPLGSAIAAFRTAAEALDAALDRLEAEGRPLDAARRGR----------------------------INDSLAGVERSFLDPAGLQGRTWFRHLLFAPGLNTGYAPWPFPGIRQAVEEKDPA 792          
BLAST of mRNA_F-serratus_M_contig1022.310.1 vs. uniprot
Match: A0A2V8SES7_9BACT (Aminopeptidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8SES7_9BACT)

HSP 1 Score: 459 bits (1182), Expect = 6.100e-147
Identity = 271/620 (43.71%), Postives = 353/620 (56.94%), Query Frame = 1
Query:    1 YSPSGNVSAAFVYANYGRPEDFDALEAVGVSVEGKIVITRYGKCFRGLKAMNAQNRGAVGTIIYSDPQQDGFTKGPAYPDGAWRPASSVQRGSVQFNSLCAGDPSRAASDKTV-------EEVCGFSQDELVPLIPVMPISYGDAEPFLRALGGPAGPEGFQGGLDFSYTVGPSSAVARMMVENEKHVGPIWNVVGTISGTLPEAEDRPVVLGNHRDAWVYGAVDPNSGTAALIELARGLGVLLGGGWRPLRTIILCSWSGEELGMIGSTAWGEANAEGILAKAAAYLNVDSAVSGSYLSIKATPTLAGLIEGALGDVEDPASGGTLLDAWSG-----------------------QLQMLGSGSDYAVFLDRLGIASVDFSFKQNAAGYAVYHSVYDSFSWVENYGDPGFRYFQASARFWGLMALRLASPEVLPFDPRRQATALEEYLAAL-------------TPPPPSDGERGASLSLSE-------DDLAPLARAIAAFRTAADEIGRSIAAAVLEGIPVEAAKEARAVMLRGAGGVTGRKEGDRAGATGLTAEDLNERLAMTERRFLSPEGLPGRPWYRHVLQAPGLYLGYAAEPFPGITQALRDGDKALARAQV 1710
            Y  SG  S   VY N+G  EDF+ L+++GVSVEG+I + RYGK FRGLK   AQ  GA G IIYSDP  DG+ KG  YPDG  RPASS+QRGSVQF S+  GDPS      T        EE+ G      +P IP +P+S+G+A   L+ LGG   P+ +QGGL F+Y +GP ++   M V+ +  +  IW+V+ TI G+     DR V+LGNHRDAW YGAVDPNSG+A+ +E ARGL   L GGW+P RTI+L SW  EE G++GST W E     + A A AYLN+DS+V+G  L +   P+L  L+    GD+ +P  GGT+LDAW                         QL+ LGSGSDY  F D  GIAS+DF+F+ +   Y VYHSVYD   W+E +GDP F Y   ++R +GL+A+RLA+ E++P        AL + L+ L                 P   E G+S S+          +  PLA+AIAAF  AA  +  ++   + EG P        AV   GAGG          GA  L    LN+ L   ER FL  +GLPGRPW+RH L APG+  GYA+ PFPG+ QAL++ D  L  +Q+
Sbjct:  166 YGASGKASGQVVYVNHGTHEDFERLDSLGVSVEGRIALVRYGKVFRGLKVKEAQAHGARGVIIYSDPADDGYMKGDVYPDGPMRPASSLQRGSVQFLSMGPGDPSTPGYPSTKGAKRVPREEMSG------IPKIPSLPLSWGEAAKILKGLGGDRVPDDWQGGLPFAYHLGPGASEVEMSVDMDYALRTIWDVIATIPGSTEP--DRQVILGNHRDAWTYGAVDPNSGSASFLETARGLAAALKGGWKPRRTILLASWDAEEYGLVGSTEWVEERLASLQANAVAYLNLDSSVTGGDLEVSGIPSLRDLVVEVAGDLAEPRRGGTVLDAWRSRRHRDWAKSEPPCPAEADVSFDLQLEALGSGSDYTAFADHAGIASLDFTFEGD---YGVYHSVYDDLFWMEKFGDPEFLYHTVASRLYGLLAMRLAAAEIVPLRYASYGRALTQELSLLRRDTLHERRIWEAATAEPGAAEPGSSASVEARKRPALVPEFTPLAKAIAAFGAAAASLDAALGR-LEEGPPA-------AVQAAGAGGF---------GAGDLAR--LNDALTQIERTFLDAKGLPGRPWFRHALYAPGVTTGYASWPFPGVVQALKERDPKLLESQM 755          
BLAST of mRNA_F-serratus_M_contig1022.310.1 vs. uniprot
Match: A0A0D2WKR6_CAPO3 (Prostate-specific membrane antigen n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WKR6_CAPO3)

HSP 1 Score: 450 bits (1157), Expect = 8.380e-145
Identity = 255/585 (43.59%), Postives = 329/585 (56.24%), Query Frame = 1
Query:    1 YSPSGNVSAAFVYANYGRPEDFDALEAVGVSVEGKIVITRYGKCFRGLKAMNAQNRGAVGTIIYSDPQQDGFTKGPAYPDGAWRPASSVQRGSVQFNSLCAGDPSRAASDKTVEEVCGFSQDELVPLIPVMPISYGDAEPFLRALGGPAGPEGFQGGLDFSYTVGPSSAVARMMVENEKHVGPIWNVVGTISGTLPEAEDRPVVLGNHRDAWVYGAVDPNSGTAALIELARGLGVLLGGGWRPLRTIILCSWSGEELGMIGSTAWGEANAEGILAKAAAYLNVDSAVSGSYLSIKATPTLAGLIEGALGDVEDPASGGTLLDAWSGQLQMLGSGSDYAVFLDRLGIASVDFSFKQNAAGYAVYHSVYDSFSWVENYGDPGFRYFQASARFWGLMALRLASPEVLPFDPRRQATALEEYLAALTPPPPSDGERGASLSLSEDDLAPLARAIAAFRTAADEIGRSIAAAVLEGIPVEAAKEARAVMLRGAGGVTGRKEGDRAGATGLTAEDLNERLAMTERRFLSPEGLPGRPWYRHVLQAPGLYLGYAAEPFPGITQALRDGDKALARAQVLVAAGCVTDAADFLS 1755
            YSP+G+ +   VY NYG  EDF+ L A GV++ G I I RYG  FRGLKA+NAQ  G  G IIYSDP  DG+ +G  YP+G WRP S +QRGSV FNSLC GDP R   DK     CG   ++L+P IPV+P+ YGDA  FL  + G   P  +QG L F Y +GP  A AR+   N ++   IWNVV  I+GT P   +  V+LGNHRDAWVYGAVDPNSGTAAL+E+AR  GVLL GGW+P R ++L SW GEE G++GSTA+GE  A+ ++  A AYLN+D+AV G  L +   P+L          V+DP +G  L   W G   ++GSGSDY VFLD LG+AS D  F      Y VYHSV+DSF+W+E  GDP F+Y +A A+ +GL+ LRLA   +LPF+    A A+  +        P   +      L  D  A L  A   F + A +I   +  A                                         DLN RL + ER+F  P G+  R W++H + AP    GY A  FPGI   +R G+  LA+  +  AA  +++   FLS
Sbjct:  125 YSPTGSAAGPLVYVNYGSTEDFEYLVAQGVNLTGAIAIARYGSIFRGLKALNAQTHGMAGLIIYSDPSDDGYAQGQLYPNGPWRPESGIQRGSVVFNSLCGGDPGRGV-DK-----CGIPLEDLIPSIPVLPMGYGDAVQFLSHIVGAPAPASWQGALPFQYNIGPG-AFARIATNNTQYTTDIWNVVAYINGTDPVEGEDYVILGNHRDAWVYGAVDPNSGTAALLEIARAYGVLLQGGWQPKRGLVLTSWDGEEYGLLGSTAFGERFADDLILHAVAYLNIDTAVMGPQLWVTLVPSLLTHFRQTAALVKDPVTGNPLSVEWDGSYDIMGSGSDYTVFLDALGVASGDLLF---GGAYGVYHSVFDSFNWMETQGDPTFQYHEACAQIFGLVGLRLADARILPFNYTEYAYAISTFYL------PQVQQLATDAKLPVDFTA-LTNAAQQFASGASKIMSRVEQAYNN--------------------------------PNYNVVDLNSRLFLAERQFTDPNGIINRKWFKHTVFAPDRENGYDASSFPGIVDMIRTGNATLAQQAITSAATALSNVGTFLS 660          
BLAST of mRNA_F-serratus_M_contig1022.310.1 vs. uniprot
Match: A0A2V8U2Q9_9BACT (Aminopeptidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8U2Q9_9BACT)

HSP 1 Score: 449 bits (1156), Expect = 3.530e-143
Identity = 271/603 (44.94%), Postives = 341/603 (56.55%), Query Frame = 1
Query:    1 YSPSGNVSAAFVYANYGRPEDFDALEAVGVSVEGKIVITRYGKCFRGLKAMNAQNRGAVGTIIYSDPQQDGFTKGPAYPDGAWRPASSVQRGSVQFNSLCAGDPSRA--ASDKTVEEVCGFSQDELVPLIPVMPISYGDAEPFLRALGGPAGPEGFQGGLDFSYTVGPSSAVARMMVENEKHVGPIWNVVGTISGTLPEAEDRPVVLGNHRDAWVYGAVDPNSGTAALIELARGLGVLLGGGWRPLRTIILCSWSGEELGMIGSTAWGEANAEGILAKAAAYLNVDSAVSGSYLSIKATPTLAGLIEGALGDVEDPASGGTLLDAWSGQLQM----------------------LGSGSDYAVFLDRLGIASVDFSFKQNAAGYAVYHSVYDSFSWVENYGDPGFRYFQASARFWGLMALRLASPEVLPFDPRRQATALEEYLAALTPPPPSDGERGASLSLSEDDLAPLARAIAAFRTAADEIGRSIAAAVLEGIPVEAAKEARAVMLRGAGGVTGRKEGDR-------AGATGLTAEDLNERLAMTERRFLSPEGLPGRPWYRHVLQAPGLYLGYAAEPFPGITQALRDGDKALARAQVLV 1716
            Y  SG  S   +Y NYG  EDF+ LE++G+ VEG+IVI RYGK FRGLK   AQ RGA   IIYSDP  DG+ KG  YPDG  RPASS+QRGSVQF S   GDPS    AS K  + V G  Q   +P IP +P+SYG+A   L+AL G   P+ +QGGL F+Y +GP  A A M VE +  V P+++V+ TI GT     DR VVLGNHRDAW YGAVDPNSGTA+ +E ARGL   L  GW+P RTI+L SW GEE G++GST W E     +     AY+N+DS+V+G  L +   P+L  LI  A GDV+DP  GGT+L+AW  + Q                       LGSGSDY  F D  GIAS DF+F+     Y VYHS+YD   W+E++GDP F Y  A++R +GL+A+RL + +++P        AL   L  L      D     +       + P ++A            R   A V +  PV      +A+    AGG+      DR       A A   T   LN+ L   ER FL   GLPGRPW++H L APGL  GYA+ PFPGI QAL+D D    +AQ+ V
Sbjct:  169 YGASGKASGKVIYVNYGTHEDFERLESLGLPVEGRIVIVRYGKVFRGLKVKEAQTRGAKAVIIYSDPADDGYMKGDIYPDGPMRPASSLQRGSVQFLSSGPGDPSTPGYASTKNAKRV-GREQMSGIPKIPSLPLSYGEAAKILKALAGDRVPDDWQGGLPFAYHLGPGPAEAEMSVEMDYAVQPLYDVIATIPGTAEP--DRLVVLGNHRDAWTYGAVDPNSGTASFLETARGLAAALKTGWKPRRTILLASWDGEEYGLLGSTEWVEDRTPALQQNGVAYINLDSSVTGGDLDVSGMPSLRDLILEAAGDVDDPRHGGTVLEAWRSRKQRDWAKTEPACPRDETTFELHLNPLGSGSDYTAFADHAGIASADFTFE---GPYGVYHSIYDDLFWMEHFGDPEFLYHTAASRLYGLLAMRLGAADIVPLRYGAYGRALSRELELLRREAVRDRRVWEAARTEPRSVEPGSQAAVE--------ARKKPALVPDLSPVT-----QAIDRLTAGGIDLDAVLDRLQENPAAASAEPQTLARLNDALVQVERAFLDKRGLPGRPWFQHTLYAPGLTTGYASWPFPGIVQALKDRDSDEMQAQIRV 752          
BLAST of mRNA_F-serratus_M_contig1022.310.1 vs. uniprot
Match: A0A2V8VLQ1_9BACT (Aminopeptidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8VLQ1_9BACT)

HSP 1 Score: 448 bits (1152), Expect = 1.040e-142
Identity = 261/599 (43.57%), Postives = 337/599 (56.26%), Query Frame = 1
Query:    1 YSPSGNVSAAFVYANYGRPEDFDALEAVGVSVEGKIVITRYGKCFRGLKAMNAQNRGAVGTIIYSDPQQDGFTKGPAYPDGAWRPASSVQRGSVQFNSLCAGDPSRA--ASDKTVEEVCGFSQDELVPLIPVMPISYGDAEPFLRALGGPAGPEGFQGGLDFSYTVGPSSAVARMMVENEKHVGPIWNVVGTISGTLPEAEDRPVVLGNHRDAWVYGAVDPNSGTAALIELARGLGVLLGGGWRPLRTIILCSWSGEELGMIGSTAWGEANAEGILAKAAAYLNVDSAVSGSYLSIKATPTLAGLIEGALGDVEDPASGGTLLDAWSGQ----------------------LQMLGSGSDYAVFLDRLGIASVDFSFKQNAAGYAVYHSVYDSFSWVENYGDPGFRYFQASARFWGLMALRLASPEVLPF-------------DPRRQATALEEYLAALTPPPPSDGERGASLSLSEDDLAPLARAIAAFRTAADEIGRSIAAAVLEGIPVEAAKEARAVMLRGAGGVTGRKEGDRAGATGLTAEDLNERLAMTERRFLSPEGLPGRPWYRHVLQAPGLYLGYAAEPFPGITQALRDGD 1686
            Y  SG  +   VY N+G  EDF+ LE++G+SVEG+I I RYGK FRGLK   AQ RGA G IIYSDP  DG+ KG  YPDG  RP S++QRGSVQF S   GDPS    AS K  + V G  Q   +P IP +P+SYG+A   L+AL G   P+ +QGGL F+Y +GP  A   M VE +  + P+++V+ TI GT     DR VVLGNHRDAW YGAVDPNSGTA+ +E ARGL   L GGW+P RTI+L SW GEE G++GST W E   E +   A AY+N+DS+V+G  L++   P+L  L+  A GD++DP  GGT+LDAW  +                      L  LGSGSDY  F D +G+AS+DFSF+     Y VYHSVYD F W+E++GDP F Y   ++R +GL+A+RL S E++P              +  R+ T  E  +       P   E G   ++       L    ++   A D  G              AA E  A++ R        +E   A         +N+ L   ER FL   GLPGR W+RH + APGL  GYA+ PFP + QAL+D D
Sbjct:  160 YGASGKAAGQVVYVNHGTHEDFERLESLGLSVEGRIAIVRYGKVFRGLKVKEAQLRGARGVIIYSDPADDGYMKGDIYPDGPMRPPSAIQRGSVQFLSSGPGDPSTPGYASTKGAKRV-GREQMTGIPKIPSLPLSYGEASKILKALAGERVPDEWQGGLPFAYHLGPGPAEVEMSVEMDYAIRPLYDVIATIPGTAEP--DRLVVLGNHRDAWTYGAVDPNSGTASFLETARGLAAALRGGWKPRRTILLASWDGEEYGLLGSTEWVEERVEALKQNAVAYVNLDSSVTGGDLTVSGIPSLRDLVVEAAGDIDDPRRGGTVLDAWKSREQREWAKSEPACGPDGARFDLMLNPLGSGSDYTAFADHVGVASLDFSFE---GPYGVYHSVYDDFFWMEHFGDPEFLYHTVASRLYGLLAMRLGSAEMVPLRYGAYGRALSRELELLRRETVRERRIWEAAKAGPRAAEPGTQAAVEARKKPALQPDFSSVTQAIDRFGG-------------AANELDALLDRA-------QENASASPDPAALGRINDALVQVERAFLDKNGLPGRAWFRHTIYAPGLTTGYASWPFPAVVQALKDRD 732          
BLAST of mRNA_F-serratus_M_contig1022.310.1 vs. uniprot
Match: A0A7S1EJY8_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EJY8_HEMAN)

HSP 1 Score: 427 bits (1098), Expect = 1.400e-139
Identity = 214/388 (55.15%), Postives = 269/388 (69.33%), Query Frame = 1
Query:  112 ITRYGKCFRGLKAMNAQNRGAVGTIIYSDPQQDGFTKGPAYPDGAWRPASSVQRGSVQFNSLCAGDPSRAASDKTVEEVCGFSQDELVPLIPVMPISYGDAEPFLRALGGPAGPEGFQGGLDFSYTVGPSSAVARMMVENEKHVGPIWNVVGTISGTLPEAED-RPVVLGNHRDAWVYGAVDPNSGTAALIELARGLGVLLGGGWRPLRTIILCSWSGEELGMIGSTAWGEANAEGILAKAAAYLNVDSAVSGSYLSIKATPTLAGLIEGALGDVEDPASGGTLLDAWSGQLQMLGSGSDYAVFLDRLGIASVDFSFKQNAAG--YAVYHSVYDSFSWVENYGDPGFRYFQASARFWGLMALRLASPEVLPFDPRRQATALEEYLAAL 1266
            + RYG+CFRGLK MNA+ RGA   IIYSDP  DGFT+G  YPDG WRP + VQRGS QF SLCAGD +R  S  +  ++CG++ ++LVP IPV+P+S+GDAEP LR LGG   P GFQGGLDF Y +GP  +V R+MVE+      IWNV   + G     ED R V+LGNHRDAWV+GA DPNSGT+A+IE+A+G+G LL  GWRP RT+ +CSW GEE G++GSTAWGE   E + AKA +Y N+D AV+G+ L + A+P+L  L+  A   + DP SG  LL+AW G ++ LG+GSDY VFLDR+GI SVD +FK   +   Y +YHSVYDSFSW+E  GDP F Y   +AR WGL+A+R A   V+   P   A  L  YL  L
Sbjct:    1 MVRYGRCFRGLKVMNAERRGAAAVIIYSDPADDGFTQGKVYPDGPWRPRTGVQRGSAQFASLCAGDVARIYSKASALDLCGYATEDLVPKIPVLPMSWGDAEPILRRLGGADAPGGFQGGLDFPYKLGPGPSVVRVMVESTMKARAIWNVCAVVPGKHYGTEDDRMVLLGNHRDAWVFGASDPNSGTSAMIEVAKGIGRLLRKGWRPHRTMKICSWDGEEYGLLGSTAWGETYEEELRAKAVSYFNMDVAVAGTELVVGASPSLEKLVREAAASLTDPVSGKPLLEAWGGLIRTLGTGSDYTVFLDRIGIPSVDLAFKPQGSNSSYGLYHSVYDSFSWMERVGDPAFEYHALAARLWGLLAIRAAGRSVVEVHPPTVAGRLALYLEEL 388          
BLAST of mRNA_F-serratus_M_contig1022.310.1 vs. uniprot
Match: A0A7W0HGH3_9BACT (M28 family peptidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W0HGH3_9BACT)

HSP 1 Score: 435 bits (1119), Expect = 2.560e-138
Identity = 263/600 (43.83%), Postives = 329/600 (54.83%), Query Frame = 1
Query:    1 YSPSGNVSAAFVYANYGRPEDFDALEAVGVSVEGKIVITRYGKCFRGLKAMNAQNRGAVGTIIYSDPQQDGFTKGPAYPDGAWRPASSVQRGSVQFNSLCAGDPSRAASDKTV-EEVCGFSQDELVPLIPVMPISYGDAEPFLRALGGPAGPEGFQGGLDFSYTVGPSSAVARMMVENEKHVGPIWNVVGTISGTLPEAEDRPVVLGNHRDAWVYGAVDPNSGTAALIELARGLGVLLGGGWRPLRTIILCSWSGEELGMIGSTAWGEANAEGILAKAAAYLNVDSAVSGSYLSIKATPTLAGLIEGALGDVEDPASGGTLLDAWSGQ------------------------LQMLGSGSDYAVFLDRLGIASVDFSFKQNAAGYAVYHSVYDSFSWVENYGDPGFRYFQASARFWGLMALRLASPEVLPFDPRRQATALEEYLAALTPPP------PSDGERGASLSLSEDDLAPLARAIAAFRTAADEIGRSIAAAVLEGIPVEAAKEARAVMLRGAGGVTGRKEGDRAGATGLTAEDLNERLAMTERRFLSPEGLPGRPWYRHVLQAPGLYLGYAAEPFPGITQALRDGDKALARAQ 1707
            Y  SG      VY NYG P DF  LE +G+SV GKI I RYG  FRGLK   +Q+RGAVG IIYSDP  DG+ +G  YPDG  RPAS++QRGSV F S   GDPS      T   +     Q   VP IP +PI+Y +AE  LR LGGP  P+ +QGGL FSY VGP +A   M V+ ++ + PI+NV+  I G++    D+ V+LGNHRDAW +GAVDPNSGTAA +E+ARG G  L  GW P RTII+ SW  EE G++GST W E +A  +   A AYLN D AV+G  L +   P+L  L   A  DV DP  GG++   W  +                        L  LGSGSDY  F+D LG+ S DF F   + GY VYHSVYD+F W++ YGDP F Y  A+A+ WGLMA+RLAS +V+P      A  L+  L +L          P D   GA   ++ D  + +  A+   RTA +   R+  A                          G K GD A         +NE L   ER FL  +GLP RPW+RH+L APGL  GYA  PFP + +AL   D A+  AQ
Sbjct:  144 YGASGAAEGEIVYVNYGSPADFARLEGMGISVAGKITIVRYGGAFRGLKVKESQDRGAVGVIIYSDPADDGYMRGDVYPDGPMRPASAIQRGSVLFLSHVPGDPSTPGWPSTTGAKRLTREQMTNVPKIPSLPIAYAEAEKILRRLGGPRVPDDWQGGLPFSYHVGPGAARVAMDVQMDEGLKPIYNVIARIKGSVEP--DKLVILGNHRDAWNHGAVDPNSGTAAQLEVARGFGAALKSGWTPKRTIIIASWDAEEYGLVGSTEWAEEHAADLSNNAIAYLNCDVAVTGPNLGMSGVPSLFALALQAARDVPDPKLGGSIGAGWESRQRAAWNMATPIELNAQQDAQFAPRLSPLGSGSDYTAFIDHLGVPSFDFGF---SGGYGVYHSVYDNFHWMQKYGDPEFLYHAAAAKLWGLMAMRLASADVVPLRFGTYANDLQADLDSLRRDALRRARTPVDASSGAKPPITPD-FSEVLGALQELRTAGESADRTADA--------------------------GLKSGDAA-----RIRRINEALVDVERAFLDTKGLPNRPWFRHLLIAPGLTTGYAPWPFPALQEALDAKDAAMFSAQ 706          
BLAST of mRNA_F-serratus_M_contig1022.310.1 vs. uniprot
Match: A0A7W1DNK0_9BACT (M28 family peptidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W1DNK0_9BACT)

HSP 1 Score: 433 bits (1113), Expect = 1.830e-137
Identity = 257/599 (42.90%), Postives = 329/599 (54.92%), Query Frame = 1
Query:    1 YSPSGNVSAAFVYANYGRPEDFDALEAVGVSVEGKIVITRYGKCFRGLKAMNAQNRGAVGTIIYSDPQQDGFTKGPAYPDGAWRPASSVQRGSVQFNSLCAGDPSRAASDKTV-EEVCGFSQDELVPLIPVMPISYGDAEPFLRALGGPAGPEGFQGGLDFSYTVGPSSAVARMMVENEKHVGPIWNVVGTISGTLPEAEDRPVVLGNHRDAWVYGAVDPNSGTAALIELARGLGVLLGGGWRPLRTIILCSWSGEELGMIGSTAWGEANAEGILAKAAAYLNVDSAVSGSYLSIKATPTLAGLIEGALGDVEDPASGGTLLDAW------------------------SGQLQMLGSGSDYAVFLDRLGIASVDFSFKQNAAGYAVYHSVYDSFSWVENYGDPGFRYFQASARFWGLMALRLASPEVLPFDPRRQATALEEYL---------AALTPPPPSDGERGASLSLSEDDLAPLARAIAAFRTAADEIGRSIAAAVLEGIPVEAAKEARAVMLRGAGGVTGRKEGDRAGATGLTAEDLNERLAMTERRFLSPEGLPGRPWYRHVLQAPGLYLGYAAEPFPGITQALRDGDKAL 1695
            Y  SG      VY NYG P DF AL  +G+SVEGKI + RYG  FRGLKA  AQ+ GA G +IYSDP+ DG+  G  YPDG  RP S++QRGSV F S   GDPS      T   +    +Q   VP IP +PISYG+AE  LR LGGP  P G+QGGL F+Y +GP +A   M V+ ++ + PI+NV+ TI G++    ++ V+LGNHRDAW +GAVDPNSG+AA +E+AR L   L  GW+P RTIIL SW  EE G++GST W E +A  +   A AYLN D+ V+G  L +  + +L  L   A  +V DP  GG++   W                        S +L  LGSGSDY VFLD LG+ S DF F     GY VYHSVYD+F W+E YGDP F Y  A AR WGLMA+RLAS +++P      A  L+  L          A T   P + +   +L+    D AP+  A+   R A +   R+  AA+                          K  D A     T + +NE L   E  FL  +GLP RPW+RH+L  PGL  GYA  PFP + +A+   D A+
Sbjct:  139 YGASGRAEGQVVYVNYGSPADFAALSDMGISVEGKIALVRYGGAFRGLKAKEAQDHGARGVLIYSDPRDDGYGAGEVYPDGPMRPESAIQRGSVLFLSHMPGDPSTPGWPSTAGAKRIARAQMTNVPKIPSLPISYGEAEKILRRLGGPVVPRGWQGGLPFTYHIGPGAARVAMEVQMDEGLKPIYNVIATIPGSVEP--EKKVILGNHRDAWTHGAVDPNSGSAAQLEVARALAAALESGWKPKRTIILASWDAEEYGLVGSTEWAEEHAADLQKNAVAYLNGDAVVTGPELEMSGSASLLALAVEAAREVTDPKRGGSVGAGWESRQRAAWATATPIDINAKEDAAFSARLGPLGSGSDYTVFLDHLGVPSWDFGFN---GGYGVYHSVYDNFRWMEKYGDPEFLYHAAGARLWGLMAMRLASADIVPLRYSTYARDLQVDLDNMRRDVIRRARTQAAPGEADAKPALNA---DFAPVLTALDELRAAGEAADRAADAAI--------------------------KSSDAA-----TVKRINEALTSVEAAFLDAKGLPNRPWFRHMLIGPGLTTGYAPWPFPALQEAVEAKDSAM 698          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1022.310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3M1WRI4_9BACT4.070e-15646.03M28 family peptidase n=1 Tax=Acidobacteria bacteri... [more]
A0A7S3LRD1_9STRA1.890e-15445.12Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A2V8TMK1_9BACT1.120e-14745.55Aminopeptidase n=1 Tax=Acidobacteria bacterium Tax... [more]
A0A2V8SES7_9BACT6.100e-14743.71Aminopeptidase n=1 Tax=Acidobacteria bacterium Tax... [more]
A0A0D2WKR6_CAPO38.380e-14543.59Prostate-specific membrane antigen n=1 Tax=Capsasp... [more]
A0A2V8U2Q9_9BACT3.530e-14344.94Aminopeptidase n=1 Tax=Acidobacteria bacterium Tax... [more]
A0A2V8VLQ1_9BACT1.040e-14243.57Aminopeptidase n=1 Tax=Acidobacteria bacterium Tax... [more]
A0A7S1EJY8_HEMAN1.400e-13955.15Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7W0HGH3_9BACT2.560e-13843.83M28 family peptidase n=1 Tax=Acidobacteria bacteri... [more]
A0A7W1DNK0_9BACT1.830e-13742.90M28 family peptidase n=1 Tax=Acidobacteria bacteri... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1022contigF-serratus_M_contig1022:315837..322415 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score714.9
Seed ortholog evalue2.8e-203
Seed eggNOG ortholog2880.D7FIJ9
KEGG koko:K01301
Hectar predicted targeting categoryother localisation
EggNOG free text desc.exopeptidase activity
EggNOG OGsCOG2234@1,KOG2195@2759
Ec32 ortholog descriptionpoly(L-malate)-hydrolase precursor
Ec32 orthologEc-27_000030.1
EC3.4.17.21
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons8
Model size2405
Cds size1611
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1022.310.1prot_F-serratus_M_contig1022.310.1Fucus serratus malepolypeptideF-serratus_M_contig1022 316519..321118 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928828.7159288-UTR-F-serratus_M_contig1022:315836..3160711622928828.7159288-UTR-F-serratus_M_contig1022:315836..316071Fucus serratus maleUTRF-serratus_M_contig1022 315837..316071 -
1690962591.2775962-UTR-F-serratus_M_contig1022:315836..3160711690962591.2775962-UTR-F-serratus_M_contig1022:315836..316071Fucus serratus maleUTRF-serratus_M_contig1022 315837..316071 -
1622928828.7318113-UTR-F-serratus_M_contig1022:316109..3165181622928828.7318113-UTR-F-serratus_M_contig1022:316109..316518Fucus serratus maleUTRF-serratus_M_contig1022 316110..316518 -
1690962591.2874348-UTR-F-serratus_M_contig1022:316109..3165181690962591.2874348-UTR-F-serratus_M_contig1022:316109..316518Fucus serratus maleUTRF-serratus_M_contig1022 316110..316518 -
1622928828.8660336-UTR-F-serratus_M_contig1022:321118..3211441622928828.8660336-UTR-F-serratus_M_contig1022:321118..321144Fucus serratus maleUTRF-serratus_M_contig1022 321119..321144 -
1690962591.3678222-UTR-F-serratus_M_contig1022:321118..3211441690962591.3678222-UTR-F-serratus_M_contig1022:321118..321144Fucus serratus maleUTRF-serratus_M_contig1022 321119..321144 -
1622928828.8810356-UTR-F-serratus_M_contig1022:322291..3224151622928828.8810356-UTR-F-serratus_M_contig1022:322291..322415Fucus serratus maleUTRF-serratus_M_contig1022 322292..322415 -
1690962591.3848696-UTR-F-serratus_M_contig1022:322291..3224151690962591.3848696-UTR-F-serratus_M_contig1022:322291..322415Fucus serratus maleUTRF-serratus_M_contig1022 322292..322415 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928828.7493365-CDS-F-serratus_M_contig1022:316518..3166451622928828.7493365-CDS-F-serratus_M_contig1022:316518..316645Fucus serratus maleCDSF-serratus_M_contig1022 316519..316645 -
1690962591.2956743-CDS-F-serratus_M_contig1022:316518..3166451690962591.2956743-CDS-F-serratus_M_contig1022:316518..316645Fucus serratus maleCDSF-serratus_M_contig1022 316519..316645 -
1622928828.769954-CDS-F-serratus_M_contig1022:317262..3178091622928828.769954-CDS-F-serratus_M_contig1022:317262..317809Fucus serratus maleCDSF-serratus_M_contig1022 317263..317809 -
1690962591.3045788-CDS-F-serratus_M_contig1022:317262..3178091690962591.3045788-CDS-F-serratus_M_contig1022:317262..317809Fucus serratus maleCDSF-serratus_M_contig1022 317263..317809 -
1622928828.7852094-CDS-F-serratus_M_contig1022:318031..3181031622928828.7852094-CDS-F-serratus_M_contig1022:318031..318103Fucus serratus maleCDSF-serratus_M_contig1022 318032..318103 -
1690962591.3214238-CDS-F-serratus_M_contig1022:318031..3181031690962591.3214238-CDS-F-serratus_M_contig1022:318031..318103Fucus serratus maleCDSF-serratus_M_contig1022 318032..318103 -
1622928828.8053763-CDS-F-serratus_M_contig1022:318616..3188181622928828.8053763-CDS-F-serratus_M_contig1022:318616..318818Fucus serratus maleCDSF-serratus_M_contig1022 318617..318818 -
1690962591.3334599-CDS-F-serratus_M_contig1022:318616..3188181690962591.3334599-CDS-F-serratus_M_contig1022:318616..318818Fucus serratus maleCDSF-serratus_M_contig1022 318617..318818 -
1622928828.8220997-CDS-F-serratus_M_contig1022:319266..3194271622928828.8220997-CDS-F-serratus_M_contig1022:319266..319427Fucus serratus maleCDSF-serratus_M_contig1022 319267..319427 -
1690962591.3485317-CDS-F-serratus_M_contig1022:319266..3194271690962591.3485317-CDS-F-serratus_M_contig1022:319266..319427Fucus serratus maleCDSF-serratus_M_contig1022 319267..319427 -
1622928828.849617-CDS-F-serratus_M_contig1022:320616..3211181622928828.849617-CDS-F-serratus_M_contig1022:320616..321118Fucus serratus maleCDSF-serratus_M_contig1022 320617..321118 -
1690962591.3571513-CDS-F-serratus_M_contig1022:320616..3211181690962591.3571513-CDS-F-serratus_M_contig1022:320616..321118Fucus serratus maleCDSF-serratus_M_contig1022 320617..321118 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1022.310.1

>prot_F-serratus_M_contig1022.310.1 ID=prot_F-serratus_M_contig1022.310.1|Name=mRNA_F-serratus_M_contig1022.310.1|organism=Fucus serratus male|type=polypeptide|length=537bp
MNAQNRGAVGTIIYSDPQQDGFTKGPAYPDGAWRPASSVQRGSVQFNSLC
AGDPSRAASDKTVEEVCGFSQDELVPLIPVMPISYGDAEPFLRALGGPAG
PEGFQGGLDFSYTVGPSSAVARMMVENEKHVGPIWNVVGTISGTLPEAED
RPVVLGNHRDAWVYGAVDPNSGTAALIELARGLGVLLGGGWRPLRTIILC
SWSGEELGMIGSTAWGEANAEGILAKAAAYLNVDSAVSGSYLSIKATPTL
AGLIEGALGDVEDPASGGTLLDAWSGQLQMLGSGSDYAVFLDRLGIASVD
FSFKQNAAGYAVYHSVYDSFSWVENYGDPGFRYFQASARFWGLMALRLAS
PEVLPFDPRRQATALEEYLAALTPPPPSDGERGASLSLSEDDLAPLARAI
AAFRTAADEIGRSIAAAVLEGIPVEAAKEARAVMLRGAGGVTGRKEGDRA
GATGLTAEDLNERLAMTERRFLSPEGLPGRPWYRHVLQAPGLYLGYAAEP
FPGITQALRDGDKALARAQVLVAAGCVTDAADFLSG*
back to top

mRNA from alignment at F-serratus_M_contig1022:315837..322415-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1022.310.1 ID=mRNA_F-serratus_M_contig1022.310.1|Name=mRNA_F-serratus_M_contig1022.310.1|organism=Fucus serratus male|type=mRNA|length=6579bp|location=Sequence derived from alignment at F-serratus_M_contig1022:315837..322415- (Fucus serratus male)
TACTCTCCGTCGGGGAACGTGAGCGCCGCCTTCGTGTACGCGAACTACGG GCGCCCCGAGGACTTTGACGCTCTCGAAGCCGTGGGCGTGTCGGTGGAGG GCAAGATCGTGATCACCAGATACGGTGAGAGAATCTACTGTTATAATAGT ATAATATATCAATAGTATAATATTAGACGCACAGACGATCAGAGTATTGT AGTGATGTTAATAATATACAAACTGCAATAGTAATAATACAATACAAAAC GATGCTATTACTATTACTATGATACAGTATTATATTAATACTAGTATTAC CTCACACTGCGTCCTATAAATAATAGCAGTAGTTGTTGTTTTTTGTCGTT TATCTGACATTTAATGATATCAATAGTACTGGTATGTCACTTTTATCACA GAAGCACAGCGTCGGAGTGGTTGGGTTGGGTTTGTTTCTTTTTTCCCCGC CAGGTGGTGACGCCCGCTCGGCCGCCGCGTGTAGGCTTATCAATATCGTC ACTATCGTATTGAAGGGGGCGACAAACAACGGATTCAGACCCATCATACG ACCTGCACGTGATTTTATTTTATTTTTGGAAGGGGGGGGGCAAGTATTCG AGACTTTACGCCACACGCCGCTGCCGCCCCGCGATCGCAGCAGGCGTGGC GGAGCGGTGAGCGACAAACAATGAAAACGCGCCGCCCCGACTCAAGGGTA AAAGAAGAAGAAAGAAAAGAAAAAACGATGGGACAAGGGTGACCGGAATG GCTTGCCTTTCCCTTCGCCCCAAGGCATCTTATTACAGTAAAAAGAAATG AGGGTGCTTACGCGTATCGTCCCGTCTTGTGTCGTATCGAAGAGATGCCC CAAGCGAGGCGGGGGTTAAAAATATCGCCTCCCGTATGAAGTAATAGGGA CTGCTAGACCGATAGTTTTGCACTTACCAAGGTTTCTCCTGAGTCGTACG TTGGCATTAATTTGTCCTGGTTGAGTAGTTAGCTCGGGTGCCAAGCATTA TTTGCGTCCCTTTCCCGAGCCTTAGCAGAGCCACGCCCGCCGTGCCGCGA CGCAACGTCTTAAACACACTCACGTTTCAAGTTCCACCGACAACCCCACC GATGAAAAATCGCTGATCGCTAGGCTTGTTGCCCGTACCGGCATTACCAT TCATGAATCAGATTATTATGGGGGTTCGTCGTCCATGCTCTACCACCGCG CCACTGACTCCCCGAATCGCCATGTACGCTTCCGTCTTCTTGTAAACGTC CCACAAAAAATAACAAATAAGGCAAGTGCTTCCGCGGACTAAAGGCGATG AACGCGCAGAACCGCGGCGCCGTGGGCACGATCATCTACTCCGACCCTCA GCAGGACGGGTTCACCAAGGGCCCCGCGTACCCGGATGGCGCTTGGCGCC CGGCCTCGAGCGTCCAGCGGGGCTCCGTGCAGTTCAACTCCCTCTGCGCG GGAGATCCCTCCCGCGCGGCGTCTGACAAGACCGTCGAGGAGGTGTGCGG GTTCTCGCAGGATGAACTGGTGCCGTTGATCCCCGTGATGCCGATCTCGT ACGGTGACGCGGAGCCCTTCCTTCGCGCGCTCGGGGGCCCCGCGGGCCCG GAGGGTTTCCAAGGAGGCCTGGATTTTTCGTACACAGTGGGGCCGAGCAG CGCGGTGGCGAGGATGATGGTGGAGAACGAGAAGCACGTCGGCCCGATAT GGAACGTTGTCGGAACCATCTCGGGGACTCTTCCCGAGGCAGAGGATCGG CCGGTCGTCCTGGGGAATCATCGAGACGCCTGGGTCTACGGCGCCGTCGG TAAGGTTGGTTCAGTAAAATATATTAAAGCCCATTTTGTAACGTACGCCC GGTCACGAGTTGCAACAATTCGAAAATAAAATGGTTGCCGCTCGTGACCC GGTGTCCGCCCGAGATAAACTTTGAGGAACCCTCCCTGTGTTCAACAGGC TCAAATATGTTTTACCCTGATACAAGTATGCTTTGTCCACGCAAGACACC GCTCGCGCCAGAGTATATTTCATACTGCATCACGCTCTACTTGTACACAA TGGTGCCTCTTCTGATGCCTGGCAGTCTCTGATAGTCCCGAGTAGGGCTT AAGATGCTTCGTCTAATGAAAATCATTTCTTCTTACGTAACGCCCTCTGA CAAGTCCATGTACTACTCGTTCCAGATAATAAAAAAAACGTCCCCTCCCC GCTCCGAGCCGACGCGAGACTACCACAGCAGTATAACAGTGCGGCATATC AGAAAGATTGACAAACAGCCGAGAATGATGTTGACGCGAGACAACAAACC TAAATTTCAGATTAAGCACCGATGTCAGTCAAGCGTTTCATCATCCATGC GATTTGGTAACCTGGTCCGACCGCCCTTGGGGACGCACAGAAGACGAACC GAATCTGGAATGACATGCAAATAGACCGCACCCCTTATTACCCGAAGGTT CGAACACCCCGATCTTATTTACCGGGCCCTCACTCGAACTGTCGACTACG CTTTCCAACATCGCCTTGCTCCGGCTCGATTACGCTTTCAAAACGCCACA CAGTAACCTTAGGTCCACAGACCCACAAGCAGCTGGCTTCGCGACCCTCA CGACACCGTCACCGCCATCATAAGGCTCATTCTTCCGTGCACCCCCCCGC CCCCGATTGAGCCGTTGTCCCCATTTGAGATGATCGCCTCCTTTTCACTT CCCACGCGATGCCCTCTGTCAGTGTCAATGTCAATGTCAATGTCAATATC AAGTCCCATGTACTCGTTCCAGCAATGATTAATAACTCTAATTACTGAAG ATGGATGTATCTCGAGCTACCGACGGCACGTGGAGGGCTGGCTGTTTTTC GCGTTGTGATTTTGGTTTTGAAAACCTTTTTCTGCTAACACCCAAGCGTG TAGCAGTTGAGCAGAATAGAGGGGGCAGCGATGGTTGAAAAGCAGACCCC CTCCTACGTGCCGCCGATGTTACAACCAAAAAATGAAGATCCTAACTCGG GCACGGCTGCTCTGATCGAGCTGGCTCGCGGGCTGGGCGTCCTCCTCGGG GGCGGCTGGAGACCCCTCCGAACAATCATCCTTTGCAGCTGGAGCGGCGA AGAGCTCGGCATGATCGGCAGTACGGCCTGGGGGGAGGCAAACGCCGAGG TATGTGACGCACATACGTACATGATGTATGGGGTATGGAGTGTAACAAAA CACGTACGGTACTTTCTCTGTGAAAGCGAAAACTATGAAACCGTTCGTTT TGTCCCGCAGAAGTGCGTATTTTTCGATTAACTGCTTTGGAGTAACAAGT GCTATAACTCTTCCACCATGCAAGATACAAGAGATACATGAAATACATGG CTAGGTATCTTGAAAAGGGACACCTACGCAGAAGTTGTGATCGGCAAGGC AAGAGTCGCTTTTGCCCAGGTATCTTGAAAGACGAACATAATCCATCCCT CCCCCCGCGAGGTTTCCGAAGGAGGCGTTTGCGGTGAGACATGTGTACGA GGACGGCGCTCTCTTGCCCATCTTGCAATTCCCCCTCTGCCCCTTCTTGC CACCCGCGATTCCCTATTAAAAATACGCTCGATTCGGACCTGGTCAGGGC ATCCTGGCGAAGGCCGCAGCCTACCTCAACGTGGACTCTGCGGTCAGTGG GTCGTACCTTAGCATCAAGGCGACGCCGACGCTCGCTGGGCTGATCGAGG GGGCGCTCGGTGACGTGGAGGACCCTGCCTCCGGCGGCACCCTCCTGGAC GCCTGGTCCGGCCAACTGCAGATGCTGGGCTCGGGTTCTGACTATGCGGG TAAGGGTGGGGAAGGAAATTCGCGCTATTGGGTCCCATTTTTCTCGTGTA GAACATTGTACAAGACACTGTGCAGTAGTATTGATAGTTCCACAGTGTAC TTGAGCACCGCAAGTTTCTCGTCGGCGGCGTTGGAGGTAACGAGGGGGGG TTTCGATTCCACGGACGAAGCACTGAGTACCAGAATTTCACGCACATGAG TCCTCCAGGAGGCCTCGTCGATAGACGTGCCCTATGACGTCGGACCCGAG ACTGATTTTTTTCCCTCGGTAGTATAGTATGACACGCCCGCGGGCGGTCC AGCAGTGCTGCTCTGTCTCACGCGATCGGCAAATATCTCGTGCCGTCGGT AAGTGTCCCACACCGTCGGTAAACGTTTAGCCCGTTACTTTTTGTTTACA CATGAAGGTATATCATTGGCAACTAAATTGAACGGTCGACCCCTTCAGCG CCGTTGCCAGTCTCGGCATTTTCTTTTCTTTTCTTTTCCCCATCTGTCTC GTGTACCCGCAGTTTTTCTTGATCGCCTGGGCATTGCCAGCGTGGACTTC TCGTTCAAGCAGAATGCCGCTGGGTACGCCGTGTGTGAGTGTGCTGAGTG CCGCTTCGGGGCGCAAGAAGGGGTGGCTAGAATCAGCGATATCGTGTGTT CGTGCTCGAGAGTGTTGGGGGAGGGCGGGAGGATTCGCTCGACGGCATTG AGAGTGACCCGAAAAAACTTAAAATTGAAAAGTGGAACCGTACAACTATT TTTTCTTCCTGTTATTTTTGTTTTCTTCTTTTTTACGTCCCTTGACTCCG CCCCAGACCATTCCGTCTACGACAGCTTCAGCTGGGTCGAAAACTACGGC GACCCGGGCTTCCGTTACTTCCAGGCGTCGGCCCGGTTTTGGGGGCTGAT GGCCCTCCGCCTCGCCTCGCCCGAAGTTCTTCCCTTCGACCCCAGGCGAC AAGCGACCGCTCTGGAAGAATACCTGGCCGCCCTCACTCCACCGCCCCCC TCCGACGGTGAACGCGGCGCCTCTTTATCTCTCTCGGAGGACGATCTAGC GCCGCTGGCAAGGGCCATAGCGGCCTTCCGAACCGCTGCGGATGAGATTG GACGCTCGATTGCCGCGGCCGTCCTTGAGGGTATTCCAGTGGAGGCGGCT AAAGAGGCGAGGGCGGTGATGCTTCGCGGAGCGGGGGGAGTAACCGGGCG GAAGGAGGGTGACCGGGCCGGGGCGACTGGTTTGACTGCGGAAGATCTGA ACGAGCGCTTGGCGATGACCGAGCGTCGGTTCTTGTCGCCGGAGGGGCTT CCGGGGAGGCCTTGGTATCGCCACGTGCTGCAAGCCCCCGGGCTGTATCT GGGGTGAGTGTGTTTAGGGAGAATTTTCTCCACAACCCCCCTCCCCCCCC GTTGAGTCTTTCCTTCGTTTTTGAGTCTTTCCCCCTTTTTTTAAAGTCAT TTCTTCTGTATCATTCATGGCCTGCACGCCCGGAAAAGGGAGTTGCACAC CCTTATTTGGATGTAATGTACGTGTTCTGACCATGGCCCACACACCCGGA AAAGGGACTGAGAGCTCTAGGCTCACGCTTGGGCTACCTGTTGATGCTTC GGGGACTCCCCCGCTTTTTAAAAGTACCGTCTCAACCAAAGGCGATTATT TTTTGCTTCGAATGCATTTTGACGTCAAAACGTCAAGCCACCAGTAGGAG CATGTGGACAGACTCAAACCATAAAACCCAGAAAGAGGAGTTCCACACAA ACACGCTTTGCATATTCTCACAGTGACCTCACAAGGCAAACGGCCCTTCT GGCACACACATCAATGCCAACATGAACCCCTCGCGCCATATGCCCTTAAT ACTCTCGTTCCGTCAACCAACTAGCTGTCCACCCAACTGACATCCGACCC CTTTCTGACCTGGGTGGGCTGCTGCTTTGCTTCACCGCGCGGGGGCATAC GTGGTCGCCTCGCCGTTCAGGTACGCCGCAGAACCGTTCCCCGGCATCAC TCAAGCGCTTCGCGACGGAGACAAGGCCCTCGCGCGGGCGCAAGTCCTTG TCGCTGCGGGTTGCGTCACAGACGCGGCAGATTTCTTGTCAGGATAAGCA GCGGAGGGAAAGGGGCCTGAGGACGGCGATGATGTTCCAGGGAGAGGAGG ACCGGCACCGGCGGCGGCAGCCGCAGCGACCGTGAAGGCAGAACCTAATA TATATGTATATATATATCTTTGGACATAAAGGGCTGATTCAAATCTCGCT GCCAATTCTAGGATGTTCGTGGAGAGTAGCAGCAGCAGCAGTTTGAGGGG GTAGGGTGGGGGAGAGTTTGCGTGTGCTGTATGGCGTCTCGGCTGGGTTT CTAAAAGCTAGAAGGCGAACAGTGTGCATGTGCCTTTTCGGTGACACATT TTTTACTTTACCAATCACACTTATTTTATGATATTATTCACCGCTGTCGT CTATTAAATAGTTTGTTGTCACGGAAAGGTAAGGCACGTGGCTCTGTAAA TTTTTTGTCACGGAAAAATAAGTGGGGGTGGCTCTGTTCGCTAGTGTTTG TGAGAGGCGTCGCTCGCCCCCGATAACGGACGGGGAAAAAAAAGGTAATT TTAAAGGGCTTGACGTTGCGGTACACACTTAAATCCGATCGCCGAATGGT TCGTTCCGTATCAGCGTACAAAATAAGCTTAAAATAAATAAATAAAAATG AAATGGAACGAAGTACACGAGGGTCAGTCAGTTGGGGAGGACGCATCGCA ACAAGAATATCTTGTTCGAGGCTCTGGCT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1022:315837..322415-

>mRNA_F-serratus_M_contig1022.310.1 ID=mRNA_F-serratus_M_contig1022.310.1|Name=mRNA_F-serratus_M_contig1022.310.1|organism=Fucus serratus male|type=CDS|length=3222bp|location=Sequence derived from alignment at F-serratus_M_contig1022:315837..322415- (Fucus serratus male)
ATGAACGCGCAGAACCGCGGCGCCGTGGGCACGATCATCTACTCCGACCC
TCAGCAGGACGGGTTCACCAAGGGCCCCGCGTACCCGGATGGCGCTTGGC
GCCCGGCCTCGAGCGTCCAGCGGGGCTCCGTGCAGTTCAACTCCCTCTGC
GCGGGAGATCCCTCCCGCGCGGCGTCTGACAAGACCGTCGAGGAGGTGTG
CGGGTTCTCGCAGGATGAACTGGTGCCGTTGATCCCCGTGATGCCGATCT
CGTACGGTGACGCGGAGCCCTTCCTTCGCGCGCTCGGGGGCCCCGCGGGC
CCGGAGGGTTTCCAAGGAGGCCTGGATTTTTCGTACACAGTGGGGCCGAG
CAGCGCGGTGGCGAGGATGATGGTGGAGAACGAGAAGCACGTCGGCCCGA
TATGGAACGTTGTCGGAACCATCTCGGGGACTCTTCCCGAGGCAGAGGAT
CGGCCGGTCGTCCTGGGGAATCATCGAGACGCCTGGGTCTACGGCGCCGT
CGATGAACGCGCAGAACCGCGGCGCCGTGGGCACGATCATCTACTCCGAC
CCTCAGCAGGACGGGTTCACCAAGGGCCCCGCGTACCCGGATGGCGCTTG
GCGCCCGGCCTCGAGCGTCCAGCGGGGCTCCGTGCAGTTCAACTCCCTCT
GCGCGGGAGATCCCTCCCGCGCGGCGTCTGACAAGACCGTCGAGGAGGTG
TGCGGGTTCTCGCAGGATGAACTGGTGCCGTTGATCCCCGTGATGCCGAT
CTCGTACGGTGACGCGGAGCCCTTCCTTCGCGCGCTCGGGGGCCCCGCGG
GCCCGGAGGGTTTCCAAGGAGGCCTGGATTTTTCGTACACAGTGGGGCCG
AGCAGCGCGGTGGCGAGGATGATGGTGGAGAACGAGAAGCACGTCGGCCC
GATATGGAACGTTGTCGGAACCATCTCGGGGACTCTTCCCGAGGCAGAGG
ATCGGCCGGTCGTCCTGGGGAATCATCGAGACGCCTGGGTCTACGGCGCC
GTCGATCCTAACTCGGGCACGGCTGCTCTGATCGAGCTGGCTCGCGGGCT
GGGCGTCCTCCTCGGGGGCGGCTGGAGACCCCTCCGAACAATCATCCTTT
GCAGCTGGAGCGGCGAAGAGCTCGGCATGATCGGCAGTACGGCCTGGGGG
GAGGCAAACGCCGAGATCCTAACTCGGGCACGGCTGCTCTGATCGAGCTG
GCTCGCGGGCTGGGCGTCCTCCTCGGGGGCGGCTGGAGACCCCTCCGAAC
AATCATCCTTTGCAGCTGGAGCGGCGAAGAGCTCGGCATGATCGGCAGTA
CGGCCTGGGGGGAGGCAAACGCCGAGGGCATCCTGGCGAAGGCCGCAGCC
TACCTCAACGTGGACTCTGCGGTCAGTGGGTCGTACCTTAGCATCAAGGC
GACGCCGACGCTCGCTGGGCTGATCGAGGGGGCGCTCGGTGACGTGGAGG
ACCCTGCCTCCGGCGGCACCCTCCTGGACGCCTGGTCCGGCCAACTGCAG
ATGCTGGGCTCGGGTTCTGACTATGCGGGGCATCCTGGCGAAGGCCGCAG
CCTACCTCAACGTGGACTCTGCGGTCAGTGGGTCGTACCTTAGCATCAAG
GCGACGCCGACGCTCGCTGGGCTGATCGAGGGGGCGCTCGGTGACGTGGA
GGACCCTGCCTCCGGCGGCACCCTCCTGGACGCCTGGTCCGGCCAACTGC
AGATGCTGGGCTCGGGTTCTGACTATGCGGTTTTTCTTGATCGCCTGGGC
ATTGCCAGCGTGGACTTCTCGTTCAAGCAGAATGCCGCTGGGTACGCCGT
GTTTTTTCTTGATCGCCTGGGCATTGCCAGCGTGGACTTCTCGTTCAAGC
AGAATGCCGCTGGGTACGCCGTGTACCATTCCGTCTACGACAGCTTCAGC
TGGGTCGAAAACTACGGCGACCCGGGCTTCCGTTACTTCCAGGCGTCGGC
CCGGTTTTGGGGGCTGATGGCCCTCCGCCTCGCCTCGCCCGAAGTTCTTC
CCTTCGACCCCAGGCGACAAGCGACCGCTCTGGAAGAATACCTGGCCGCC
CTCACTCCACCGCCCCCCTCCGACGGTGAACGCGGCGCCTCTTTATCTCT
CTCGGAGGACGATCTAGCGCCGCTGGCAAGGGCCATAGCGGCCTTCCGAA
CCGCTGCGGATGAGATTGGACGCTCGATTGCCGCGGCCGTCCTTGAGGGT
ATTCCAGTGGAGGCGGCTAAAGAGGCGAGGGCGGTGATGCTTCGCGGAGC
GGGGGGAGTAACCGGGCGGAAGGAGGGTGACCGGGCCGGGGCGACTGGTT
TGACTGCGGAAGATCTGAACGAGCGCTTGGCGATGACCGAGCGTCGGTTC
TTGTCGCCGGAGGGGCTTCCGGGGAGGCCTTGGTATCGCCACGTGCTGCA
AGCCCCCGGGCTGTATCTGGGACCATTCCGTCTACGACAGCTTCAGCTGG
GTCGAAAACTACGGCGACCCGGGCTTCCGTTACTTCCAGGCGTCGGCCCG
GTTTTGGGGGCTGATGGCCCTCCGCCTCGCCTCGCCCGAAGTTCTTCCCT
TCGACCCCAGGCGACAAGCGACCGCTCTGGAAGAATACCTGGCCGCCCTC
ACTCCACCGCCCCCCTCCGACGGTGAACGCGGCGCCTCTTTATCTCTCTC
GGAGGACGATCTAGCGCCGCTGGCAAGGGCCATAGCGGCCTTCCGAACCG
CTGCGGATGAGATTGGACGCTCGATTGCCGCGGCCGTCCTTGAGGGTATT
CCAGTGGAGGCGGCTAAAGAGGCGAGGGCGGTGATGCTTCGCGGAGCGGG
GGGAGTAACCGGGCGGAAGGAGGGTGACCGGGCCGGGGCGACTGGTTTGA
CTGCGGAAGATCTGAACGAGCGCTTGGCGATGACCGAGCGTCGGTTCTTG
TCGCCGGAGGGGCTTCCGGGGAGGCCTTGGTATCGCCACGTGCTGCAAGC
CCCCGGGCTGTATCTGGGGTACGCCGCAGAACCGTTCCCCGGCATCACTC
AAGCGCTTCGCGACGGAGACAAGGCCCTCGCGCGGGCGCAAGTCCTTGTC
GCTGCGGGTTGCGTCACAGACGCGGCAGATTTCTTGTCAGGATAAGTACG
CCGCAGAACCGTTCCCCGGCATCACTCAAGCGCTTCGCGACGGAGACAAG
GCCCTCGCGCGGGCGCAAGTCCTTGTCGCTGCGGGTTGCGTCACAGACGC
GGCAGATTTCTTGTCAGGATAA
back to top