mRNA_F-serratus_M_contig1022.308.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Match: L1J9T3_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J9T3_GUITC) HSP 1 Score: 80.1 bits (196), Expect = 3.180e-12 Identity = 82/315 (26.03%), Postives = 121/315 (38.41%), Query Frame = 1 Query: 655 YAGSTSKRIYTVDTRDPMSVTAKWDCGSFVNSLHVYSDGSKVLSADASGKIMTWDVR--TGRVVDSYSLEGPIHISHIEASPPDAG------RQDEEGLLLAANCFDNTLRVFHRRFYNDPLRHAAADTTGASTTAYAGGVTPSSPQAPTVSVSVSPSGDAGKGARGAGIGERTVTGGTREKQPSLQLMHALRGHTVQNWPIRCAFFRGLHHRPPRVRLGMFGGXXXXXXXGIRGTEGMGYSDLGKDWQHSLVLATGSADGSIHVFDLSQGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTVRIWLPNRK 1575 +AG++ + +D R + + G +N L D +K+ S D+ G I WD+R DS + HIE++ P + Q +E LLAAN +DN LRVF R G ER G+RE SL+++H+L+GH +N+PIR +FFRG + V + + G ++ V D S F G+ Q L GH DRVY A FH +P +V+ SAD ++IW P + Sbjct: 195 WAGTSQNQACLIDKRSSTFASVLQNDG-MMNGLCFTPDCNKLFSGDSKGCIKAWDLRMMNESACDSVAF-------HIESNKPISDLHFATLSQSQEISLLAANSYDNILRVFSRA--------------------------------------------------NVGSHERDQMPGSRE---SLRMIHSLQGHKNKNFPIRSSFFRGKLYNYANVSICTSTQQLASSTSRSTTLDKSLLVATGSVDKYCYVY-----DISNPSF------GEFFQKLEGHADRVYCASFHHEKPLIVTASADSKMKIWGPRER 437
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Match: A0A2P6MV32_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MV32_9EUKA) HSP 1 Score: 79.3 bits (194), Expect = 8.520e-12 Identity = 43/127 (33.86%), Postives = 66/127 (51.97%), Query Frame = 1 Query: 1186 LQLMHALRGHTVQNWPIRCAFFRGLHHRPPRVRLGMFGGXXXXXXXGIRGTEGMGYSDLGKDWQHSLVLATGSADGSIHVFDLSQGQGDE--MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVRIW 1560 + L+H++ + +N+PI +FF G +H E + + K S +LATGSAD +++F++S +G +Q L GH D+VYS +FHP +P L S SAD TVR+W Sbjct: 443 MDLLHSMSHYKNKNYPITSSFFIGKNHSDSNCE------------------EDEAFEE--KTVDDSFLLATGSADSQVYIFNVSGVEGSHILLQRLEGHTDKVYSVNFHPFDPILASASADGTVRLW 549
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Match: A0A433D2F6_9FUNG (Uncharacterized protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D2F6_9FUNG) HSP 1 Score: 72.4 bits (176), Expect = 6.750e-11 Identity = 51/172 (29.65%), Postives = 70/172 (40.70%), Query Frame = 1 Query: 1189 QLMHALRGHTVQNWPIRCAFFRGL-----------------HHRPPRVRLGMFGGXXXXXXXGIRGTEGMGYSDLGKDW-------------------------QHSLVLATGSADGSIHVFDLSQGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTVRIWLPNRKR 1578 +L+HAL+G +NWPI+ +F+ G H + P+ R + R + G +D G Q V + G I F +Q + MQ L GH DRVY+ FHPTEP L SCSAD TV+IW P +K+ Sbjct: 25 RLLHALKGFKNKNWPIKSSFYCGKECESRSTDARLISLPPSHSKKPQPRSSL--DPTAPDPGARRVLQRRGRADCGGGHGREGGPARAQRPACYGQRRSVCLFVQRGRVFSLGGGTNQIK-FTPNQNSAELMQRLEGHTDRVYAVHFHPTEPILASCSADFTVKIWGPTKKK 193
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Match: A0A1Y1VSD7_9FUNG (WD40 repeat-like protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1VSD7_9FUNG) HSP 1 Score: 72.8 bits (177), Expect = 6.950e-10 Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = 1 Query: 649 VAYAGSTSKRIYTVDTRDPMSVTAKWDCGSFVNSLHVYSDGSKVLSADASGKIMTWDVRTGRVVDSYSLEGPIH-ISHIEASPPDAGRQDEEGLLLAANCFDNTLRVFHRRF 981 + +AG+T K + D R S + ++ S +N+L+VY+DG+ +L+ D+ G + TWDVRTG+ V+S E +SHI S DEE L+ N +DN +RV+ R F Sbjct: 199 IFFAGTTKKLVIMKDVRKS-SESFVFENNSMINTLYVYNDGTYILTGDSLGYLKTWDVRTGKCVNSILNEQRGQPVSHIAVSKRII--DDEEPRYLSVNSYDNIIRVYDRGF 307
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Match: A0A7S1ELM2_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1ELM2_HEMAN) HSP 1 Score: 65.9 bits (159), Expect = 3.310e-9 Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 1 Query: 1375 QHSLVLATGSADGSIHVFDLSQGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTVRIWL 1563 Q VL TGS DGS+ V D G D +Q + GH DRV A HP P L+SCS D+T+R+W+ Sbjct: 76 QSGEVLFTGSFDGSVAVSDAESG--DLLQRMEGHSDRVVQAAPHPERPWLLSCSVDKTLRLWM 136 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1022.308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1022.308.1 >prot_F-serratus_M_contig1022.308.1 ID=prot_F-serratus_M_contig1022.308.1|Name=mRNA_F-serratus_M_contig1022.308.1|organism=Fucus serratus male|type=polypeptide|length=514bp MKGRHSSSSSESYFRAQYESVCKERDVLLGTIEAQERDIDDLKKSVYELSback to top mRNA from alignment at F-serratus_M_contig1022:270629..294107- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1022.308.1 ID=mRNA_F-serratus_M_contig1022.308.1|Name=mRNA_F-serratus_M_contig1022.308.1|organism=Fucus serratus male|type=mRNA|length=23479bp|location=Sequence derived from alignment at F-serratus_M_contig1022:270629..294107- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1022:270629..294107- >mRNA_F-serratus_M_contig1022.308.1 ID=mRNA_F-serratus_M_contig1022.308.1|Name=mRNA_F-serratus_M_contig1022.308.1|organism=Fucus serratus male|type=CDS|length=3084bp|location=Sequence derived from alignment at F-serratus_M_contig1022:270629..294107- (Fucus serratus male)back to top |