mRNA_F-serratus_M_contig1022.307.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1022.307.1 vs. uniprot
Match: G8YTB0_PICSO (Piso0_000184 protein n=2 Tax=Pichia sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC 10061 / NRRL Y-12695) TaxID=559304 RepID=G8YTB0_PICSO) HSP 1 Score: 192 bits (488), Expect = 5.670e-50 Identity = 133/428 (31.07%), Postives = 202/428 (47.20%), Query Frame = 3 Query: 552 KAPIRGVNIGALFVLERWILPT-FTNWG---NETGI-IDQHSFSAKCGDLGICDSLKDHWKNWYDANDFKKMKEAGLNTVRLPVGWWYFAPKFAVSPQPYILPDEDLYDRHHPITDVIGWAKDAGLQVILDLHGAPGSQNGLDNSGLTSPNPNNLVWGESWMYSPANYRNTVRTLAAMAEYINHIEDAFELDNIMALELLNEPW-AFLDLGRVRDFYATSIETVRLVRPLMPIILHDAFR-GPMWSTLLKDFPYKDVVMDTHIYHGFN--AADASSDTAVGDRQKMYVHERMACSYSSMLRYQTCASLPVFVGEWSLAIDNCMPWLDS--KFENY-GQCDN----------LEERESKSWWTGHTRSFAMRQLDMYERELGWAFWTWKLENQLEKNEGAAKYWSFRLAVDHGFI-----DTDYPDNAC 1754 K +R VN+G FVLE +I P+ F W N++ + +D++ + K G L+ HW W +DFK++ +AG+N VR+P+G+W + A PY+ ++ ++ + WAK+ + V++DLHGA GSQNG DNSGL Y NT T A+++ I+ D ++ +ELLNEP + L++ ++ +Y + +R + +++HDAF+ W+ L D P + ++D H Y F+ A + S D H + AC + R T FVGEWS A+ +C WL+ K Y G DN L+ SW+ + R F QLD YE GW FWTWK E+ +E WS + + GF D YP N C Sbjct: 43 KGKLRAVNLGGWFVLEPFITPSLFDQWSKPNNDSQVPVDEYHYCEKLGKEVCQQRLEAHWSTWITEDDFKQISDAGMNAVRIPIGYWAY---LARDEDPYVQGQDEYLEK------ALSWAKEYNISVLIDLHGAVGSQNGFDNSGLRDH------------YDFQKDNNTQLTFEALSKIISKYNVPEYYDVVLGIELLNEPLGSILNMDDLKQYYTEGYDKIRESGSVQNVVIHDAFQQSGYWNDFL-DLPAWNAIVDHHHYEVFSPEALEKSIDQ----------HIQTACGWG---RNSTQEYHWNFVGEWSAALTDCARWLNGVGKGARYSGDLDNSPYIDSCSKYLDYSSWPSWYKTNVRKFVEAQLDAYELSAGWIFWTWKTEDAVE--------WSMQRLLAGGFFPQPLSDRQYP-NQC 426
BLAST of mRNA_F-serratus_M_contig1022.307.1 vs. uniprot
Match: A0A8H3I9Z6_9LECA (Exo-1,3-beta-glucanase n=1 Tax=Heterodermia speciosa TaxID=116794 RepID=A0A8H3I9Z6_9LECA) HSP 1 Score: 192 bits (487), Expect = 6.570e-50 Identity = 129/397 (32.49%), Postives = 180/397 (45.34%), Query Frame = 3 Query: 540 YDRIKAPIRGVNIGALFVLERWILPT-FTNWGNETGIIDQHSFSAKCGDLGICDSLKDHWKNWYDANDFKKMKEAGLNTVRLPVGWWYFAPKFAVSPQPYILPDEDLYDRHHPITDVIGWAKDAGLQVILDLHGAPGSQNGLDNSGLTSPNPNNLVWGESWMYSPANYRNTVRTLAAMAEYINHIEDAFELDNIMALELLNEPWA-FLDLGRVRDFYATSIETVRLVRPLMPIILHDAFRG--PMWSTLLKDFPYKDVVMDTHIYHGFNAADASSDTAVGDRQKMYVHERMACSYSSMLRYQTCASLPVFVGEWSLAIDNCMPWLDS--KFENY----------GQCDNLEERESKSWWTG---HTRSFAMRQLDMYERELGWAFWTWKLENQLEKN 1673 YD +K +RGVN+G FVLE WI P+ F+ W + T ++D++++SA G L DHW W +DF + AGLN VR+P+G+W AP + PY+ + D+ IGWA+ AGL+V++DLHGAPGSQNG DNSG W + A Y+N + D + ++LLNEP LDL ++DFY VR P + HDAF +W+ K+ ++DTH Y F+ + + H AC+ L VGEW+ A +C WL+ K Y G CD + + + R F QLD YE+ GW FWTW E+ E N Sbjct: 39 YDNVK--VRGVNLGGWFVLEPWIKPSLFSEWADSTTVVDEYTYSAALGKDEALSRLSDHWNTWITQDDFNAIAAAGLNHVRIPIGYWAVAP---IDGDPYVQGQLPILDQ------AIGWARSAGLKVMIDLHGAPGSQNGFDNSGKYG--------SVGWQQGDTVAQTITAITNIAARYVN------DNDVVTIIQLLNEPLGPVLDLDGIKDFYNQGYVAVRDSEPNTVVCFHDAFEDFVSVWNGFTAG--PKNNMLDTHQYQIFSPDQVAMSPSD--------HISAACALGPKL---ASTDKWTVVGEWTGAQTDCAKWLNGLGKGARYDGTLAGSYVVGSCDGKYTGSVSALSSDDKYNLRHFIEAQLDAYEQHTGWFFWTWVTESAPEWN 397
BLAST of mRNA_F-serratus_M_contig1022.307.1 vs. uniprot
Match: A0A8H5CHI0_9AGAR (Cellulase domain-containing protein n=2 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H5CHI0_9AGAR) HSP 1 Score: 194 bits (492), Expect = 6.770e-50 Identity = 143/425 (33.65%), Postives = 198/425 (46.59%), Query Frame = 3 Query: 540 YDRIKAPIRGVNIGALFVLERWILPTFTNWGNETGIIDQHSFSAKCGDLGICDSLKDHWKNWYDANDFKKMKEAGLNTVRLPVGWWYFA-----PKFAVSPQPYILPDEDLYDRHHPITDVIGWAKDAGLQVILDLHGAPGSQNGLDNSGLTSPNPNNLVWGESWMYSPANYRNTVRTLAAMAEYINHIEDAFELDNIMALELLNEPWAFLDLGRVRDFYATSIETVRLVR-PLMPIILHDAFRGP-MWSTLLKDFPYKDVVMDTHIYHGFNAADASSDTAVGDRQKMYVHERMACSYSSMLRYQTCASLPVFVGEWSLAIDNCMPWLD-----SKFENYGQCDNLEERESKSWWTGHTRSFA------MR-----QLDMYERELGWAFWTWKLENQLEKNEGAAKYWSFRLAVDHGFIDTDYPD 1745 Y R K IRGVN+G VLE WI P+F IID+++ D LK HW++W +DF MK AGLN VR+P+G+W ++ SP PYI P Y + + WAK G+ VI+DLHGAPGSQNG DNSG + NP W N TV TL +A + D EL N A + WA +R F+ + + VR M +++ DAF G W+ L DV+MD H Y F+ D D + D H R AC Y+ +L ++ VGEWS A+ +C WL+ ++++N S S +TG +F+ +R Q+++ ER GW FWTWK E A WS++ ++ G+I D D Sbjct: 96 YSRDK--IRGVNLGGWLVLEPWITPSFFERTGNKDIIDEYTLGQLLDHGTAQDMLKQHWESWITEDDFIAMKAAGLNHVRIPLGYWSVPMTSDDTAYSTSPDPYI-PGAWTY-----LLRGLNWAKKHGIHVIVDLHGAPGSQNGYDNSGQRTGNP-------QWALGGDNVARTVDTLRFIAANAGGLIDVLELLN-EAAGFRGDDWA----AAIRKFWLDAYDAVRAAAGDGMKVMIGDAFLGVNSWTNFLVPPRGHDVLMDFHEYQIFS--DGELDRSTDD------HIRFACQYNDVLPAFAGGNIWTVVGEWSNAVTDCARWLNGRNVGARWDNTYSTTGGRYHGSCSGYTGSYTNFSDAYKEVLRRYFEVQIEIGERVQGWVFWTWKAEE--------ADEWSYQKGLEGGWIPRDPTD 484
BLAST of mRNA_F-serratus_M_contig1022.307.1 vs. uniprot
Match: W4JT06_HETIT (Glycoside hydrolase family 5 protein n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4JT06_HETIT) HSP 1 Score: 192 bits (488), Expect = 1.380e-49 Identity = 137/428 (32.01%), Postives = 195/428 (45.56%), Query Frame = 3 Query: 534 PWYDRIKAPIRGVNIGALFVLERWILPTFTNWGNETGIIDQHSFSAKCGDLGICDSLKDHWKNWYDANDFKKMKEAGLNTVRLPVGWWYFAPKFAVSP-----QPYILPDEDLYDRHHPITDVIGWAKDAGLQVILDLHGAPGSQNGLDNSGLTSPNPNNLVWGESWMYSPANYRNTVRTLAAMAEYINHIEDAFELDNIMALELLNEPWAFLD---LGRVRDFYATSIETVR-LVRPLMPIILHDAFRGPM-WSTLLKDFPYKDVVMDTHIYHGFNAADASSDTAVGDRQKMYVHERMACSYSSMLRYQTCASLPVFVGEWSLAIDNCMPWL---------DSKFEN---YGQCDNLEERESK--SWWTGHTRSFAMRQLDMYERELGWAFWTWKLENQLEKNEGAAKYWSFRLAVDHGFIDTDYPD 1745 P + KAP+RGVN+G FVLE WI P+ N N T I+D+++F L+DHW W +DF + AGL VR+PVG+W +V+P PY+L + WA+ + VILDLHGAPGSQNG DNSG + NP VWG +P N T+ L+ +A + + D +ELLNE F +R F+ VR P + +++ DAF G W+ L + V+MD H Y F+ + S + H AC+ L+ ++L GEWS AI +C WL D +++ G CD S S + R + Q+++ E GWA+WTWK EN A WS++ ++ G+I D D Sbjct: 70 PPFQYGKAPVRGVNLGGWFVLEPWITPSIFNNTNNTAIVDEYTFGQYLEGNVALQILQDHWNTWITESDFIAINAAGLTHVRIPVGYWSVPTGVSVAPFISGAWPYLL-------------RALQWARKHSIYVILDLHGAPGSQNGYDNSGQRTSNP---VWG----VNPENVTRTLNVLSVIASEVGGMVDI--------IELLNEAAGFTGGSWPATIRSFWQDGYVVVRNATGPNVKVMIGDAFLGVQSWTDFLTYPSAQGVLMDYHDYQIFSVPELS--------RSQDQHVAFACTLLPGLQSFANSNLWTLTGEWSTAITDCALWLNGRGVGSRWDGTYDSTPALGSCDGFTGDSSSFSSSYKAFLRKYWEVQVEIGESLQGWAYWTWKAEN--------ADEWSYQKGLEGGWIPMDPSD 453
BLAST of mRNA_F-serratus_M_contig1022.307.1 vs. uniprot
Match: A3LX35_PICST (Glucan 1,3-beta-glucosidase (Exo-1,3-beta-glucanase) n=1 Tax=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) TaxID=322104 RepID=A3LX35_PICST) HSP 1 Score: 191 bits (485), Expect = 1.830e-49 Identity = 125/394 (31.73%), Postives = 194/394 (49.24%), Query Frame = 3 Query: 561 IRGVNIGALFVLERWILPT----FTNWGNETGI-IDQHSFSAKCGDLGICDSLKDHWKNWYDANDFKKMKEAGLNTVRLPVGWWYFAPKFAVSPQPYILPDEDLYDRHHPITDVIGWAKDAGLQVILDLHGAPGSQNGLDNSGLTSPNPNNLVWGESWMYS-PANYRNTVRTLAAMAEYINHIEDAFELDNIMALELLNEPWAFL-DLGRVRDFYATSIETVRLVRPLMPIILHDAFRGP-MWSTLL--KDFPYKDVVMDTHIYHGFNAADASSDTAVGDRQKMYVHERMACSYS--SMLRYQTCASLPVFVGEWSLAIDNCMPWLDS---------KFENYGQCDNLEERESKSWWTG----HTRSFAMRQLDMYERELGWAFWTWKLENQLE 1667 IRGVN+G FVLE +I P+ + NWG+++ + +D++ ++ K G L L HWK WY DF + AGLN VR+P+G+W F + PY+ + D+ +GWA GL+V +DLHGAPGSQNG DNSGL ++ Y P N + T+ L + E + E + + ++ +ELLNEP + D+ +++F +R + P+I+HDAF+ P W L ++ Y VV+D H Y F+ + + D + H +AC+++ S Y + GEWS A+ +C WL+ +++N + WT + R + QLD +E+ GW FW WK EN +E Sbjct: 53 IRGVNLGGWFVLEPYITPSLFEQWENWGDDSQVPVDEYHYTQKLGKLVAGQRLDTHWKTWYTEQDFSDIAAAGLNFVRIPIGYWAFQ---LLDNDPYVQGQVEYLDQ------ALGWANKYGLKVWIDLHGAPGSQNGFDNSGLR----------DTVQYQQPNNVQVTLNVLEQIFEKYGNGEYS---NYVIGIELLNEPLGPVSDMNNLKNFLTQGYNNLRQTGSVTPVIIHDAFQAPGYWDNFLTVENGDYWSVVIDHHHYQVFSYGELARD--------IDQHISVACNWAWDSKKEYHWNVA-----GEWSAALTDCAKWLNGVGRGARYAGQYDNSAYIGDCTPYLDLGTWTQDYKTNVRKYIEAQLDGFEQTGGWVFWNWKTENAVE 411 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1022.307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1022.307.1 >prot_F-serratus_M_contig1022.307.1 ID=prot_F-serratus_M_contig1022.307.1|Name=mRNA_F-serratus_M_contig1022.307.1|organism=Fucus serratus male|type=polypeptide|length=715bp MMALTMALLAAGATRTLCSHFQQPAGLEDRSPGNLGNAGADPKTFRCELDback to top mRNA from alignment at F-serratus_M_contig1022:181691..213240+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1022.307.1 ID=mRNA_F-serratus_M_contig1022.307.1|Name=mRNA_F-serratus_M_contig1022.307.1|organism=Fucus serratus male|type=mRNA|length=31550bp|location=Sequence derived from alignment at F-serratus_M_contig1022:181691..213240+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1022:181691..213240+ >mRNA_F-serratus_M_contig1022.307.1 ID=mRNA_F-serratus_M_contig1022.307.1|Name=mRNA_F-serratus_M_contig1022.307.1|organism=Fucus serratus male|type=CDS|length=4290bp|location=Sequence derived from alignment at F-serratus_M_contig1022:181691..213240+ (Fucus serratus male)back to top |