mRNA_F-serratus_M_contig1021.289.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1021.289.1
Unique NamemRNA_F-serratus_M_contig1021.289.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1021.289.1 vs. uniprot
Match: A0A6H5JGZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ7_9PHAE)

HSP 1 Score: 591 bits (1524), Expect = 1.830e-201
Identity = 302/564 (53.55%), Postives = 394/564 (69.86%), Query Frame = 1
Query:    1 QEHDYLEEYEAKHTADGEGLSRAMAGEAASFTIRVAREE-GESPAV-DSWN-VDDGTFFYVWIANEDQIFTAEVVNNG--DGTLVATYESAFPGEYLVYVEAVVISNHDEGVPIKGSPFSLTITGD-PAVDIDTLPTC---EIGNGNGEDFFWNTGTWVSSNIASAEHGVTRDGWVFQPKTCVYDTFSYDDLMLLASLS-EPTWVLILGGSVQRGLYLMLVDMILAQGQKDDFGSSSIQKCWGYADITVGNLRVTYQDMRLWRVGSGKESVECNNEKLVTGSSTAYIRSSKQLLQSTVFRYGYPMPTVIVAPSFL---RSGDDSPEITVLKDALPSTWHGTLFMLQHMSGLGTYWQFNNPTRTAWQDVGIKYHGSAPLDDAGLRKMESYREQDPRVVFMSTFPMYQAKLFENQNTRDGKRSYGGSQHYHYVVA-SSEPVTYNGSKMVHSSILEMISHIIIATTVEGKAAFLEKVAATPD-IGRQTSAVRRTFELCTDCPAGLLPFHVKSVPEPVCKRAMSLPGNASTGEVWNNELCPDWCLATEPVDQTPTESGLVDVRICELK 1647
            Q H Y     A HTA G+GL +A  G  ASFTI++  +  G+   +  +W  +    F YVWIANEDQI TAEVV+ G  DGTL ATY+S FPG Y V++E V +S   EGVPI GSPFSLTI GD P +++++LP C   E  N +  D FW  GTW+SSN+ASA HGV R+GWVFQPK+CV+DTFSY+DLMLLAS+  EPTW+L+LGGSV+RG++L L+DM+LA GQK    SS + KCWGYAD+ VGNLR+TYQDMRL+R     +SV CNNEKL + S++A + S+ Q L STVF+ G   PT+++A S L   R+      + VL DA+P +W G LF + HM+GLG YW   NPT TA ++VGI +   +P DD GL KM+ Y+ +DPRV FMS FPMYQAKLFEN+ +R+G R + GSQH+HY+   +S P T NG+ MVHS+I EM++++I+   VE KA+   K AA+ D I + +S V ++F++C DCP  LLPFHVK +PEPVC+   SLPG A  G+VW+  LCPDWC+  EPV Q  T+S +VDVR+C  +
Sbjct:   49 QAHSYRSHERAPHTASGDGLHKATVGMPASFTIQLVGDNLGDFHVLLPNWERIRSRRFIYVWIANEDQILTAEVVDGGRKDGTLTATYKSDFPGNYSVHIEEVQLSKKGEGVPILGSPFSLTIAGDAPTLNVNSLPVCSSDEDANTDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASIGGEPTWLLVLGGSVERGVFLTLIDMVLAAGQKQGIRSSVLNKCWGYADVRVGNLRLTYQDMRLFRFTISTDSVACNNEKLTSESTSALVHSAGQFLASTVFQDGGQWPTMMMAASRLIPTRAEHTQFSVEVLMDAMPPSWEGKLFFVDHMAGLGNYWTEENPTMTALKNVGIWFDRMSPDDDNGLGKMDGYQTRDPRVSFMSVFPMYQAKLFENEGSRNGIRRFAGSQHFHYISKETSAPETRNGTIMVHSTITEMLANVILGRAVETKASLHAKAAASKDEIQKLSSEVGKSFQVCWDCPGTLLPFHVKPIPEPVCEILESLPGGAKMGDVWSGSLCPDWCMKQEPVSQKNTQSDVVDVRMCSAR 612          
BLAST of mRNA_F-serratus_M_contig1021.289.1 vs. uniprot
Match: D7FXE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE0_ECTSI)

HSP 1 Score: 581 bits (1498), Expect = 1.710e-198
Identity = 293/547 (53.56%), Postives = 383/547 (70.02%), Query Frame = 1
Query:   43 ADGEGLSRAMAGEAASFTIRVAREE-GESPAVDSWNVDDG-TFFYVWIANEDQIFTAEVVNNG--DGTLVATYESAFPGEYLVYVEAVVISNHDEGVPIKGSPFSLTITGD-PAVDIDTLPTC---EIGNGNGEDFFWNTGTWVSSNIASAEHGVTRDGWVFQPKTCVYDTFSYDDLMLLASLS-EPTWVLILGGSVQRGLYLMLVDMILAQGQKDDFGSSSIQKCWGYADITVGNLRVTYQDMRLWRVGSGKESVECNNEKLVTGSSTAYIRSSKQLLQSTVFRYGYPMPTVIVAPSFLRSGDD-SPEITVLKDALPSTWHGTLFMLQHMSGLGTYWQFNNPTRTAWQDVGIKYHGSAPLDDAGLRKMESYREQDPRVVFMSTFPMYQAKLFENQNTRDGKRSYGGSQHYHYVVAS-SEPVTYNGSKMVHSSILEMISHIIIATTVEGKAAFLEKVAATPDIGRQTSA-VRRTFELCTDCPAGLLPFHVKSVPEPVCKRAMSLPGNASTGEVWNNELCPDWCLATEPVDQTPTESGLVDVRICELK 1647
            A G+GL +A  G +ASFTI++  +E G   ++  W  +    F YVWI+++DQI  AEVV +G  +GTL ATY+S FPG+YLV+VE V  S   EG+PI GSPFSL I GD P +D+ +LP C   + G+ +  D FW  GTW+S+N+ASA HGV R GWVFQPK+CV+DTFSY DLMLLAS   EPTW++++GGSVQRG++L LVDM LA GQKDD  +S ++KCWGYAD+ VGNLR+TYQDMRL++V    +SV CNNEKL +GS++A++ S+K  L STVFR G   P  I+APS+L    + +  I VL D+LP +W G L  + HM+G   +W   NPTR A +DV I   G  P DD  LRKM+ Y+ QDPRV FMS FPMYQAKLFEN+ +R G R YG S HYHY+ ++ S+P  +NG+ MVHS++ EM+++I++   VE KA    K AA+     Q  A V ++F++C+DCP  +LP HVK +PEPVC+   SLPGNA TGEVW+ ELCPDWC+   PV Q  T+SG VDVR C ++
Sbjct:    2 ASGDGLHQATVGISASFTIQLVGDEVGGGGSLPDWEPNSSFRFIYVWISSKDQILIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSERGEGLPIVGSPFSLKIAGDFPTLDVHSLPVCGSQDDGSTDIADTFWRPGTWLSANVASAAHGVMRTGWVFQPKSCVFDTFSYQDLMLLASPDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLEKCWGYADLRVGNLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTVFRDGTQWPATILAPSYLVPEKNVNHMIEVLMDSLPPSWEGKLLFVDHMAGFSIHWTQGNPTRAALKDVRITATGRTPTDDVALRKMDGYQTQDPRVSFMSAFPMYQAKLFENERSRQGIRHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIMLGQAVETKAELYAKAAASTGGSEQERADVGKSFQVCSDCPRQMLPVHVKPIPEPVCEIVESLPGNAETGEVWDGELCPDWCMKQAPVSQKETQSGPVDVRECSIE 548          
BLAST of mRNA_F-serratus_M_contig1021.289.1 vs. uniprot
Match: D8LJ62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ62_ECTSI)

HSP 1 Score: 576 bits (1484), Expect = 3.630e-195
Identity = 291/559 (52.06%), Postives = 373/559 (66.73%), Query Frame = 1
Query:   31 AKHTADGEGLSRAMAGEAASFTIRVA---------REEGESPAVDSWNVDDGTFFYVWIANEDQIFTAEVVNNGDGTLVATYESAFPGEYLVYVEAVVISNHDE---GVPIKGSPFSLTITGDPAVDIDTLPTCEIGNGNGEDF---FWNTGTWVSSNIASAEHGVTRDGWVFQPKTCVYDTFSYDDLMLLASLSEPTWVLILGGSVQRGLYLMLVDMILAQGQKDDFGSSSIQKCWGYADITVGNLRVTYQDMRLWRVGSGKESVECNNEKLVTGSSTAYIRSSKQLLQSTVFRYGYPMPTVIVAPSFLRSGDDSP--EITVLKDALPSTWHGTLFMLQHMSGLGTYWQFNNPTRTAWQDVGIKYHGSAPLDDAGLRKMESYREQDPRVVFMSTFPMYQAKLFENQNTRDGKRSYGGSQHYHYVVAS-SEPVTYNGSKMVHSSILEMISHIIIATTVEGKAAFLEKVAA-TPDI---GRQTSAVRRTFELCTDCPAGLLPFHVKSVPEPVCKRAMSLPGNASTGEVWNNELCPDWCLATEPVDQTPTESGLVDVRICE 1641
            A HTA G GL  A  G  ASFTIR+A          ++GE      +NVD   F YVW+A+ED +F A V NNG+GTL A YES+FPG+YLV+VE V +   D    G PI GSPFSLT++GDPAVD+D LP C  G G  ED    +W TG+WVSSNIA+  HGV RDGWVFQPKTCVY+ FSYDDLMLLA L EP W+L LG S+ RG++L ++DM LAQGQKD+F +S ++KCWG+ DI +GNLR++YQD+RL+ V S  ++  CN+EKL +GS+ AY+ S++  LQ T+FR   P P+VI APS +   D++P  +I+VL DALPS+W GTL ML  + G G  W   NPT      V      S    D+GL +ME YR++DPRV FMS FPMYQ +LFEN+ +R G+R YG S HYHYV    + P  Y G+KMVHS++ EM+++++I   V  KAA  E+    + D+     +  A  RTFELCTDCPA L+P HVK  P   C    +LPGNA+ G+ W++E CPDWC+A EP  Q    +GLVDVR+CE
Sbjct:   68 APHTAAGPGLRSASTGVPASFTIRLAGVDASGARPEQQGEKNPDWDYNVDKKRFIYVWVASEDNVFVAGVRNNGNGTLTAAYESSFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGDPAVDVDALPVCG-GEGEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLDEPAWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFIDIRIGNLRISYQDLRLYTVSSVDDATVCNDEKLASGSTAAYVSSAELFLQDTIFRENKPWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPMYQGRLFENEESRIGERCYGCSIHYHYVSDDPNSPEAYGGAKMVHSAVTEMLANVLITRAVGTKAALRERAGTHSSDVTSTAEERQADTRTFELCTDCPATLIPLHVKPSPLLKCDTVSALPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVCE 625          
BLAST of mRNA_F-serratus_M_contig1021.289.1 vs. uniprot
Match: A0A6H5K8P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P1_9PHAE)

HSP 1 Score: 531 bits (1368), Expect = 9.150e-178
Identity = 290/624 (46.47%), Postives = 374/624 (59.94%), Query Frame = 1
Query:   88 SFTIRVAREE-GESPAVDSWNVDDG-TFFYVWIANEDQIFTAEVVNNG--DGTLVATYESAFPGEYLVYVEAVVISNHDEGVPIKGSPFSLTITGD-PAVDIDTLPTC---EIGNGNGEDFFWNTGTWVSSNIASAEHGVTRDGWVFQPKTCVYDTFSYDDLMLLASLS-EPTWVLILGGSVQRGLYLMLVDMILAQGQKDDFGSSSIQKCWGYADITVGNLRVTYQDMRLWRVGSGKESVECNNEKLVTGSSTAYIRSSKQLLQSTVFRYGYPMPTVIVAPSFLRSGDDSPEIT-------------VLKDALPSTWHGTLFMLQHMSGLGTYWQFNNPTRTAWQDVGIKYHGSAPLDDAGLRKMESYREQDPRVVFMSTFPMYQAK--LFENQNTRDGKRSYGGSQHYHYVVAS-SEPVTYNGSKMVHSSILEMI------------------------------------------------------------------------------SHIIIATTVEGKAAFLEKVAATPDIGRQTSA-VRRTFELCTDCPAGLLPFHVKSVPEPVCKRAMSLPGNASTGEVWNNELCPDWCLATEPVDQTPTESGLVDVRICELK 1647
            SFTI +  +E G   ++  W  +    F YVWI ++DQI  AEVV +G  +GTL ATY+S FPG+YLV+VE V  S   EG+PI GSPFSLTITGD P +D+D+LP C   + G+ +  D FW  GTW+SSN+ASA HGV R+GWVFQPK+CV+DTFSY DLMLLASL  EPTW++++GGSVQRG++L LVDM LA GQKDD  +S +QKCWGYAD+ VGNLR+TYQDMRL++V    +SV CNNEKL +GS+ A++ S+K+ L ST FR G   P  I+APS+L   ++  ++              VL D+LP +W G L  + HM+G   +W   NPTRTA  DV I   G  P DD  LRKM+ Y+ QDPRV F+S FP+  A+  LFEN+ +R G R YG S HYHYV ++ S+P  +NG+ MVHS++ EM+                                                                              S I+I   VE KA    K AA+ +   Q S  V ++F++C+DCP  LLP HVK +PEPVC+   SLPGNA TGEVW+ ELCPDWC+   PV Q  T+SG VDVR C ++
Sbjct:    2 SFTIELVGDEIGGGGSLPDWEPNSSFRFIYVWICSKDQILIAEVVGDGSNNGTLTATYQSDFPGDYLVHVEEVQPSKRGEGLPIVGSPFSLTITGDGPTLDVDSLPVCGSQDDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLQKCWGYADLRVGNLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTAAFVHSAKEFLASTAFRDGTQWPATILAPSYLVPENNVNQMIEAYIRPASCAHAQVLMDSLPPSWEGKLLFVDHMAGFRIHWTQGNPTRTALMDVRITATGRTPTDDFALRKMDGYQTQDPRVSFISAFPVSFAERNLFENERSRQGIRHYGASIHYHYVSSTTSDPEAHNGTTMVHSTMTEMLANVSRRRVLTGTKAVSPRHFFVVSGFRDQQRKAGIEGEMLLVSKRTCWDRLQCPCTAEPKPPDAPFVFCRATFLYKSYSQIMIGRAVETKAELHAKAAASTEGSEQQSVDVGKSFQVCSDCPRQLLPAHVKPIPEPVCETVESLPGNAETGEVWDGELCPDWCMKQAPVSQKETQSGPVDVRECSME 625          
BLAST of mRNA_F-serratus_M_contig1021.289.1 vs. uniprot
Match: D8LHZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ4_ECTSI)

HSP 1 Score: 512 bits (1318), Expect = 1.640e-171
Identity = 278/560 (49.64%), Postives = 350/560 (62.50%), Query Frame = 1
Query:    1 QEHDYLEEYEAKHTADGEGLSRAMAGEAASFTIRVAREE-GESPAVDSWNVDDGT-FFYVWIANEDQIFTAEVVNNG--DGTLVATYESAFPGEYLVYVEAVVISNHDEGVPIKGSPFSLTITGD-PAVDIDTLPTC---EIGNGNGEDFFWNTGTWVSSNIASAEHGVTRDGWVFQPKTCVYDTFSYDDLMLLASLS-EPTWVLILGGSVQRGLYLMLVDMILAQGQKDDFGSSSIQKCWGYADITVGNLRVTYQDMRLWRVGSGKESVECNNEKLVTGSSTAYIRSSKQLLQSTVFRYGYPMPTVIVAPSFLRSGDDSPEITVLKDALPSTWHGTLFMLQHMSGLGTYWQFNNPTRTAWQDVGIKYHGSAPLDDAGLRKMESYREQDPRVVFMSTFPMYQAKLFENQNTRDG---KRSYGGSQHYHYVVA-SSEPVTYNGSKMVHSSILEMISHIIIATTVEGKAAFLEKVAATPDIGRQTSA-VRRTFELCTDCPAGLLPFHVKSVPEPVCKRAMSLPGNASTGEVWNNELCPDWCLATEPVDQTPTESGLVDVRIC 1638
            Q H Y     A HTA G+GL +A  G  ASFTI++  ++ G  P    W  +  T F YVWIAN+DQI  AEVV+ G  +GTL ATY+S FPG+YLVY++ V  S  DEGVPI GSPFSLTI GD P +DI++LP C   E  N +  D FW +GTW+SSN+ASA HGV R+GWVFQPK+CV+DTFSY+DLMLLASL  EPTW+L+LGGSVQRG++L LVDM+LA GQK D  SS IQKCWGYAD+ VGN R+TYQ                                                                    VL  ALP +W G L  + HM+G    W+ +NPT T  +DV I + GS+P DD GL KME Y  +DPRV FMS FPMYQAKLFEN+ + +G    R +  S H+HYV + +S P T NG+ MVHS+I EM+++++I   VE KA    K AA+ D  R+ SA V ++F++C+DCP+ LLPFHVK++PE VC+   SLPG+A TGEVW   LCPDWC+   P+ Q+ TESG+V+VR C
Sbjct:   46 QAHSYRSHERAPHTASGDGLHKATVGRPASFTIQLVGDQLGSLP---DWKPNTSTRFIYVWIANKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFSLTIAGDAPTLDINSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIRSSVIQKCWGYADVRVGNFRLTYQ--------------------------------------------------------------------VLMGALPPSWEGKLSFVDHMAGFEILWKEDNPTMTDLEDVRIWHLGSSPDDDNGLGKMEGYETRDPRVSFMSVFPMYQAKLFENEESNNGINGVRRFAASHHFHYVSSDASAPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMSAEVGKSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWAGSLCPDWCMKQAPMSQSKTESGVVEVRRC 534          
BLAST of mRNA_F-serratus_M_contig1021.289.1 vs. uniprot
Match: A0A6H5K539_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K539_9PHAE)

HSP 1 Score: 495 bits (1274), Expect = 2.430e-165
Identity = 268/562 (47.69%), Postives = 346/562 (61.57%), Query Frame = 1
Query:    1 QEHDYLEEYEAKHTADGEGLSRAMAGEAASFTIRVAREE-GESPAVDSWNVDDGT-FFYVWIANEDQ--IFTAEVVNNG--DGTLVATYESAFPGEYLVYVEAVVISNHDEGVPIKGSPFSLTITGD-PAVDIDTLPTC---EIGNGNGEDFFWNTGTWVSSNIASAEHGVTRDGWVFQPKTCVYDTFSYDDLMLLASLS-EPTWVLILGGSVQRGLYLMLVDMILAQGQKDDFGSSSIQKCWGYADITVGNLRVTYQDMRLWRVGSGKESVECNNEKLVTGSSTAYIRSSKQLLQSTVFRYGYPMPTVIVAPSFLRSGDDSPEITVLKDALPSTWHGTLFMLQHMSGLGTYWQFNNPTRTAWQDVGIKYHGSAPLDDAGLRKMESYREQDPRVVFMSTFPMYQAKLFENQNTRDGKRSYGGSQHYHYVVA-SSEPVTYNGSKMVHSSILEMISHIIIATTVEGKAAFLEKVAATPD-IGRQTSAVRRTFELCTDCPAGLLPFHVKSVPEPVCKRAMSLPGNASTGEVWNNELCPDWCLATEPVDQTPTESGLVDVRICELK 1647
            Q H Y     A HTA G+GL +A  G +ASFTI++  ++ G  P    W  +  T F YVWIAN+DQ  I  AEV + G  +GTL ATY+S FPG+YLVY++ V  S  DEGVPI GSPFSLTI GD P +D+++LP C   E  N +  D FW +GTW+SSN+ASA HGV R+GWVFQPK+CV+DTFSY+DLMLLASL  EPTW+L+LGGSVQRG++L L+DM+LA GQK D  SS +QKCWGYAD+ VGNLR+TYQ                                                                    VL DALP +W G L  + HM+G G  W+  NPT TA +DV + Y  S+P DD GL KM++Y  +DPR        MYQAKLFEN+ +++G R +  SQH+HYV + +S P T NG+ MVHS+I EM+++++I   VE KA    K AA+ D I +  +   + F++C+DCP+ LLPFHVK++PE VC+   SLPG+A TGE W   LCPDWC+   PV Q+ T+SG+V+VR C  K
Sbjct:   27 QAHSYRSLERASHTASGDGLHKATVGRSASFTIQLVGDQLGSLP---DWKPNSSTRFIYVWIANKDQDEILIAEVADGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFSLTIAGDAPTLDVNSLPVCSTHEDTNKDIPDTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKHDIQSSVVQKCWGYADVRVGNLRLTYQ--------------------------------------------------------------------VLMDALPPSWEGKLSFVDHMAGFGIMWEEENPTMTALEDVRMWYLSSSPDDDNGLGKMDAYETRDPR--------MYQAKLFENEQSKNGIRRFAVSQHFHYVSSDASGPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMNAEFGKAFQVCSDCPSALLPFHVKAIPESVCEIVQSLPGDAKTGEAWPGSLCPDWCMKQAPVSQSTTQSGVVEVRWCRRK 509          
BLAST of mRNA_F-serratus_M_contig1021.289.1 vs. uniprot
Match: A0A6H5JGW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW9_9PHAE)

HSP 1 Score: 496 bits (1276), Expect = 4.800e-165
Identity = 265/552 (48.01%), Postives = 351/552 (63.59%), Query Frame = 1
Query:  193 QIFTAEVVNNG--DGTLVATYESAFPGEYLVYVEAVVISNHDEGVPIKGSPFSLTITGD-PAVDIDTLPTCEI---GNGNGEDFFWNTGTWVSSNIASAEHGVTRDGWVFQPKTCVYDTFSYDDLMLLASLS-EPTWVLILGGSVQRGLYLMLVDMILAQGQKDDFGSSSIQKCWGYADITVGNLRVTYQDMRL-------------WR-------------------------------VGSGKESVECNNEKLVTGSSTAYIRSSKQLLQSTVFRYGYPMPTVIVAPSFLRSGDDSPEITVLKDALPSTWHGTLFMLQHMSGLGTYWQFNNPTRTAWQDVGIKYHGSAPLDDAGLRKMESYREQDPRVVFMSTFPMYQAKLFENQNTRDGKRSYGGSQHYHYVVA-SSEPVTYNGSKMVHSSILEMISHIIIATTVEGKAAFLEKVAATPD-IGRQTSAVRRTFE-----------------LCTDCPAGLLPFHVKSVPEPVCKRAMSLPGNASTGEVWNNELCPDWCLATEPVDQTPTESGLVDVRIC 1638
            QI  AEV ++G  +GTL ATY+S FPG+YLVY++ V  S  DEGVPI GSPFSLTI GD P +D+++LP C      N N  D FW +GTW+SS++ASA HGV R+GWVFQPK+CV+DTFSY+DLMLLASL  EPTW+L+LGGSVQRG++L L+DM+LA GQK+D  SS +QKCWGYAD+ VGNLR+TYQ+                WR                               + +  +S+ CNNEKL++GS+ A+I S++Q L ST+FR G P PTV++APS L               +PS   GT F ++ +      W+  NPT TA +DV + Y   +P DD GL KM+ Y  +DPRV FMS FPMYQAKLFEN+ +++G R +  SQH+HYV + +S P T NG+ MVHS+I EM+++++I   VE KA    K AA+ D I +  + V ++F+                 +C+DCP+ LLPFHVK++PE VC+   SLPG+A TGE W  +LCPDWC+   PV Q+ TESG+V+VR C
Sbjct:   13 QILIAEVADDGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFSLTIAGDAPTLDVNSLPVCSTHDDANKNIADTFWRSGTWLSSSVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIQSSVVQKCWGYADVRVGNLRLTYQEAVTDGLGRELAISALEWRQFHRELCWLRQLLFHNEAETNIMLLFFTNAGLSNSVDSLVCNNEKLMSGSTAAFIHSAEQFLASTIFREGGPWPTVVMAPSNL---------------IPSNNEGTQFSVEEV-----LWKEENPTMTALEDVRMSYLSRSPDDDNGLGKMDGYETRDPRVSFMSVFPMYQAKLFENEQSKNGIRRFAVSQHFHYVSSDASGPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMNAEVGKSFQAKAGTRRNGQFQREFVTVCSDCPSSLLPFHVKAIPESVCEIVESLPGHAKTGEAWPGDLCPDWCMKQAPVSQSKTESGVVEVRRC 544          
BLAST of mRNA_F-serratus_M_contig1021.289.1 vs. uniprot
Match: D7FXD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD9_ECTSI)

HSP 1 Score: 481 bits (1239), Expect = 1.180e-159
Identity = 257/566 (45.41%), Postives = 334/566 (59.01%), Query Frame = 1
Query:    1 QEHDYLEEYEAKHTADGEGLSRAMAGEAASFTIRVAREE---GESPAVDSWNVDDGT-FFYVWIANEDQIFTAEVVNNGD-GTLVATYESAFPGEYLVYVEAVVISNHDEGVPIKGSPFSLTITGD-PAVDIDTLPTC---EIGNGNGEDFFWNTGTWVSSNIASAEHGVTRDGWVFQPKTCVYDTFSYDDLMLLASLS-EPTWVLILGGSVQRGLYLMLVDMILAQGQKDDFGSSSIQKCWGYADITVGNLRVTYQDMRLWRVGSGKESVECNNEKLVTGSSTAYIRSSKQLLQSTVFRYGYPMPTVIVAPSFLRSGDDSPEITVLKDALPSTWHGTLFMLQHMSGLGTYWQFNNPTRTAWQDVGIKYHGSA-----PLDDAGLRKMESYREQDPRVVFMSTFPMYQAKLFENQNTRDGKRSYGGSQHYHYVV-ASSEPVTYNGSKMVHSSILEMISHIIIATTVEGKAAFLEKVAATPDIGRQTSA-VRRTFELCTDCPAGLLPFHVKSVPEPVCKRAMSLPGNASTGEVWNNELCPDWCLATEPVDQTPTESGLVDVRICELK 1647
            Q H Y     A HTA G+GL  A  G +ASFTI++  +        ++ +W  +  + F YVWI+NEDQI  AE+V +G+ GTL ATY+S FPG+YLVYVE V  S   EG+PI GSPFSL I GD P +D+++LP C   E G+ +  D FW  GTW+SSN+ASA HGV R+GWVFQPK+CV+DTFSY DLMLLASL  EPTW++++GGSVQRG++L LVDM+LA GQKDD  +S++ KCWGY D+ VGNLR+TYQD+                                                                                           YW   NPT  A +DV I + G       P D + L KM+ Y+ +D RV FMS FPMYQAK FEN+ ++ G R YGG+ HYHY+  A+S P  +NGS MVHS++ EM+++++I   VE KAA   K AA+ D+ +Q  A V ++F++C+DCP  L+PFHVK +P+P+C+ A SL G+A  GEVWN ELCPDWC+   PV Q  T+SG VDVR C LK
Sbjct:   61 QAHGYSSNESAAHTASGDGLHEATVGISASFTIQLVGDNLGGSGGSSLPNWEPNSSSRFIYVWISNEDQILIAEIVGDGNTGTLTATYKSDFPGDYLVYVEEVQPSEQGEGLPIVGSPFSLKIAGDFPTLDVNSLPVCDSQEDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDIATSTLGKCWGYTDLLVGNLRLTYQDV-------------------------------------------------------------------------------------------YWYEGNPTMAALEDVSIAFTGGRASRRPPFDGSALSKMDGYQARDSRVSFMSAFPMYQAKFFENEGSKQGTRRYGGNIHYHYISSAASNPEAHNGSIMVHSTMTEMLANVMIGRAVETKAALFAKAAASTDVNKQERADVGKSFQVCSDCPRDLMPFHVKPIPDPICETAESLRGDAQVGEVWNGELCPDWCMKQAPVSQLATQSGPVDVRECSLK 535          
BLAST of mRNA_F-serratus_M_contig1021.289.1 vs. uniprot
Match: D7FLN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN2_ECTSI)

HSP 1 Score: 427 bits (1098), Expect = 1.250e-139
Identity = 232/514 (45.14%), Postives = 306/514 (59.53%), Query Frame = 1
Query:  148 VDDGTFFYVWIANEDQIFTAEVVNNGDGTLVATYESAFPGEYLVYVEAVVISNH----------DEGVPIKGSPFSLTITGDPAVDIDTLPTCEIGNG--NGEDFFWNTGTWVSSNIASAEHGVTRDGWVFQPKTCVYDTFSYDDLMLLASLS-EPTWVLILGGSVQRGLYLMLVDMILAQGQKDDFGSSSIQKCWGYADITVGNLRVTYQDMRLWRVGSGKE-SVECNNEKLVTGSSTAYIRSSKQLLQSTVFRYGYPMPTVIVAPSFLRSGDDSPE--ITVLKDALPSTWHGTLFMLQHMSGLGTYWQFNNPTRTAWQDVGIKYHGSAPLD-DAGLRKMESYREQDPRVVFMSTFPMYQAKLFENQNTRDGKRSYGGSQHYHYVVASSEPVTYNGSKMVHSSILEMISHIIIATTVEGKAAFLEKVAATPDIGRQTSAVRRTFELCTDCPAGLLPFHVKSVPEPVCKRAMSLPGNASTGEVWNNELCPDWCLATEPVDQTPTESGLVDVRIC 1638
            +DD  F YVWIA+ D +  A VV+NGDGTL ATYES +PG+YLV+V+ V               +    I  SPF LTI+G+ AVD+D LP C+  +   + ED FW TG+W+SS  ASA+HGV RDGWVFQPKTCV+DTFSYDDLMLLA+ S EPTW+LILG SVQRG++L LVDM+LAQGQK DF +S+IQKCWG+A++ VGNLR+TYQD+RL  VG  ++ S  C+++KL   +   ++ ++++ L+ +VF  G   P+VI+AP F+   D++    ITV+ DALPS W+GTL M++HM+GLG  + ++NPT     +V   +H S  +  D GL +++ Y++QD R  FMSTFP                                                     I+I+  V  KAA  EK  ATP            FE+CTDCPA L+P HVK VP PVC     L G+A+ GE W    CP WC + EPVD       L DVR+C
Sbjct:    1 MDDKHFVYVWIASTDHVLHAAVVDNGDGTLTATYESPYPGDYLVHVQDVCTDMSVVGRGKKRPGERAKAIVDSPFRLTISGEIAVDVDDLPLCDAEHPQEDEEDTFWRTGSWISSKFASAKHGVLRDGWVFQPKTCVHDTFSYDDLMLLATGSKEPTWLLILGTSVQRGVFLTLVDMVLAQGQKSDFATSAIQKCWGFAEVRVGNLRLTYQDLRLHEVGLAQDDSAVCHDDKLAINNVAVFVAAARRFLRRSVFAAGKQWPSVIMAPPFMEDSDEAANLPITVIMDALPSAWNGTLLMMEHMAGLGFTYNYDNPTAATLAEVNPTWHLSKFIGVDNGLGRIKRYQQQDARTKFMSTFP-----------------------------------------------------IVISKAVGSKAALYEK--ATPSTNTHRGGGNEIFEVCTDCPASLIPHHVKPVPVPVCNATSVLAGDAAVGEAWGGRGCPQWC-SKEPVDGV---LNLKDVRVC 455          
BLAST of mRNA_F-serratus_M_contig1021.289.1 vs. uniprot
Match: D7G348_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G348_ECTSI)

HSP 1 Score: 389 bits (1000), Expect = 1.610e-125
Identity = 215/490 (43.88%), Postives = 273/490 (55.71%), Query Frame = 1
Query:  184 NEDQIFTAEVVNNG--DGTLVATYESAFPGEYLVYVEAVVISNHDEGVPIKGSPFSLTITGDPAVDIDTLPTCEIGNGNGEDFFWNTGTWVSSNIASAEHGVTRDGWVFQPKTCVYDTFSYDDLMLLASLS-EPTWVLILGGSVQRGLYLMLVDMILAQGQKDDFGSSSIQKCWGYADITVGNLRVTYQDMRLWRVGSGKESVECNNEKLVTGSSTAYIRSSKQLLQSTVFRYGYPMPTVIVAPSFLRSGDDSPEITVLKDALPSTWHGTLFMLQHMSGLGTYWQFNNPTRTAWQDVGIKYHGSAPLDDAGLRKMESYREQDPRVVFMSTFPMYQAKLFENQNTRDGKRSYGGSQHYHYVVA-SSEPVTYNGSKMVHSSILEMISHIIIATTVEGKAAFLEKVAATPDIGRQTSA-VRRTFELCTDCPAGLLPFHVKSVPEPVCKRAMSLPGNASTGEVWNNELCPDWCLATEPVDQTPTESGLVDVRIC 1638
            + +QI  AEVV++G  +GTL ATY+S FPG Y VY++ V +S  D                               N +  D FW  GTW+SSN+ASA HGV R+GWVFQP +CV DTFSY+DLMLLASL  EPTW+L+LGGSVQRG++L L+DM+LA GQK+D  SS ++KCWGYAD+ VGNLR+TYQ                                                                                           G YW   NPT TA + VGI++ G  P DD GL KM+ Y+ +D RV FMS FPMYQAKLFENQ +R+G R +  SQH+H+V   +S P T NG+ MVHS+I EM++++++   VE KA    K AA+ D  R+ SA V ++F++C+DCP  LLPFHVK +PEPVC    SLPG A TGEVW+ +LCPDWC+   PV QT TES +V VR C
Sbjct:   46 DNEQILIAEVVDDGSKNGTLTATYKSDFPGTYWVYIDEVELSRKD------------------------------ANNDIADTFWRPGTWLSSNVASAAHGVLRNGWVFQPISCVLDTFSYEDLMLLASLDKEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIISSVLRKCWGYADVQVGNLRLTYQ-------------------------------------------------------------------------------------------GCYWTEENPTMTALKGVGIRFGGRWPNDDNGLGKMDGYQTRDSRVSFMSVFPMYQAKLFENQKSRNGLRRFAASQHFHFVSTDASAPETRNGTIMVHSTITEMLANVMVGRAVETKAKLYAKAAASTDEIRKISAEVGKSFQVCSDCPGSLLPFHVKGIPEPVCDIVESLPGQAKTGEVWSGDLCPDWCMKQAPVSQTKTESDVVKVREC 414          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1021.289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JGZ7_9PHAE1.830e-20153.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXE0_ECTSI1.710e-19853.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJ62_ECTSI3.630e-19552.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K8P1_9PHAE9.150e-17846.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHZ4_ECTSI1.640e-17149.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K539_9PHAE2.430e-16547.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGW9_9PHAE4.800e-16548.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXD9_ECTSI1.180e-15945.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FLN2_ECTSI1.250e-13945.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G348_ECTSI1.610e-12543.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1021contigF-serratus_M_contig1021:57051..62981 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score570.9
Seed ortholog evalue6.4e-160
Seed eggNOG ortholog2880.D7FXE0
Hectar predicted targeting categoryother localisation
EggNOG OGs2E5RD@1,2SCI8@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size2199
Cds size1590
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928825.1484408-UTR-F-serratus_M_contig1021:57050..575901622928825.1484408-UTR-F-serratus_M_contig1021:57050..57590Fucus serratus maleUTRF-serratus_M_contig1021 57051..57590 -
1690962589.6048832-UTR-F-serratus_M_contig1021:57050..575901690962589.6048832-UTR-F-serratus_M_contig1021:57050..57590Fucus serratus maleUTRF-serratus_M_contig1021 57051..57590 -
1622928825.2606103-UTR-F-serratus_M_contig1021:62912..629811622928825.2606103-UTR-F-serratus_M_contig1021:62912..62981Fucus serratus maleUTRF-serratus_M_contig1021 62913..62981 -
1690962589.6790311-UTR-F-serratus_M_contig1021:62912..629811690962589.6790311-UTR-F-serratus_M_contig1021:62912..62981Fucus serratus maleUTRF-serratus_M_contig1021 62913..62981 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928825.1618345-CDS-F-serratus_M_contig1021:57590..578151622928825.1618345-CDS-F-serratus_M_contig1021:57590..57815Fucus serratus maleCDSF-serratus_M_contig1021 57591..57815 -
1690962589.615432-CDS-F-serratus_M_contig1021:57590..578151690962589.615432-CDS-F-serratus_M_contig1021:57590..57815Fucus serratus maleCDSF-serratus_M_contig1021 57591..57815 -
1622928825.1736264-CDS-F-serratus_M_contig1021:58075..581801622928825.1736264-CDS-F-serratus_M_contig1021:58075..58180Fucus serratus maleCDSF-serratus_M_contig1021 58076..58180 -
1690962589.623087-CDS-F-serratus_M_contig1021:58075..581801690962589.623087-CDS-F-serratus_M_contig1021:58075..58180Fucus serratus maleCDSF-serratus_M_contig1021 58076..58180 -
1622928825.1942647-CDS-F-serratus_M_contig1021:59134..592931622928825.1942647-CDS-F-serratus_M_contig1021:59134..59293Fucus serratus maleCDSF-serratus_M_contig1021 59135..59293 -
1690962589.631318-CDS-F-serratus_M_contig1021:59134..592931690962589.631318-CDS-F-serratus_M_contig1021:59134..59293Fucus serratus maleCDSF-serratus_M_contig1021 59135..59293 -
1622928825.2062023-CDS-F-serratus_M_contig1021:60607..607631622928825.2062023-CDS-F-serratus_M_contig1021:60607..60763Fucus serratus maleCDSF-serratus_M_contig1021 60608..60763 -
1690962589.6403482-CDS-F-serratus_M_contig1021:60607..607631690962589.6403482-CDS-F-serratus_M_contig1021:60607..60763Fucus serratus maleCDSF-serratus_M_contig1021 60608..60763 -
1622928825.2202163-CDS-F-serratus_M_contig1021:61302..613711622928825.2202163-CDS-F-serratus_M_contig1021:61302..61371Fucus serratus maleCDSF-serratus_M_contig1021 61303..61371 -
1690962589.6496763-CDS-F-serratus_M_contig1021:61302..613711690962589.6496763-CDS-F-serratus_M_contig1021:61302..61371Fucus serratus maleCDSF-serratus_M_contig1021 61303..61371 -
1622928825.2331197-CDS-F-serratus_M_contig1021:61861..620651622928825.2331197-CDS-F-serratus_M_contig1021:61861..62065Fucus serratus maleCDSF-serratus_M_contig1021 61862..62065 -
1690962589.659821-CDS-F-serratus_M_contig1021:61861..620651690962589.659821-CDS-F-serratus_M_contig1021:61861..62065Fucus serratus maleCDSF-serratus_M_contig1021 61862..62065 -
1622928825.2457256-CDS-F-serratus_M_contig1021:62240..629121622928825.2457256-CDS-F-serratus_M_contig1021:62240..62912Fucus serratus maleCDSF-serratus_M_contig1021 62241..62912 -
1690962589.6695123-CDS-F-serratus_M_contig1021:62240..629121690962589.6695123-CDS-F-serratus_M_contig1021:62240..62912Fucus serratus maleCDSF-serratus_M_contig1021 62241..62912 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1021.289.1prot_F-serratus_M_contig1021.289.1Fucus serratus malepolypeptideF-serratus_M_contig1021 57591..62912 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1021.289.1

>prot_F-serratus_M_contig1021.289.1 ID=prot_F-serratus_M_contig1021.289.1|Name=mRNA_F-serratus_M_contig1021.289.1|organism=Fucus serratus male|type=polypeptide|length=530bp
MAGEAASFTIRVAREEGESPAVDSWNVDDGTFFYVWIANEDQIFTAEVVN
NGDGTLVATYESAFPGEYLVYVEAVVISNHDEGVPIKGSPFSLTITGDPA
VDIDTLPTCEIGNGNGEDFFWNTGTWVSSNIASAEHGVTRDGWVFQPKTC
VYDTFSYDDLMLLASLSEPTWVLILGGSVQRGLYLMLVDMILAQGQKDDF
GSSSIQKCWGYADITVGNLRVTYQDMRLWRVGSGKESVECNNEKLVTGSS
TAYIRSSKQLLQSTVFRYGYPMPTVIVAPSFLRSGDDSPEITVLKDALPS
TWHGTLFMLQHMSGLGTYWQFNNPTRTAWQDVGIKYHGSAPLDDAGLRKM
ESYREQDPRVVFMSTFPMYQAKLFENQNTRDGKRSYGGSQHYHYVVASSE
PVTYNGSKMVHSSILEMISHIIIATTVEGKAAFLEKVAATPDIGRQTSAV
RRTFELCTDCPAGLLPFHVKSVPEPVCKRAMSLPGNASTGEVWNNELCPD
WCLATEPVDQTPTESGLVDVRICELKDGE*
back to top

mRNA from alignment at F-serratus_M_contig1021:57051..62981-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1021.289.1 ID=mRNA_F-serratus_M_contig1021.289.1|Name=mRNA_F-serratus_M_contig1021.289.1|organism=Fucus serratus male|type=mRNA|length=5931bp|location=Sequence derived from alignment at F-serratus_M_contig1021:57051..62981- (Fucus serratus male)
CAGGAACACGACTACTTGGAAGAATATGAAGCCAAGCACACCGCCGACGG GGAAGGACTCTCGCGAGCCATGGCCGGCGAGGCGGCATCGTTTACGATTC GCGTAGCAAGGGAGGAAGGGGAAAGTCCAGCTGTCGATAGCTGGAATGTG GACGACGGAACATTTTTTTACGTCTGGATAGCCAATGAGGACCAGATTTT TACCGCGGAAGTAGTCAACAACGGGGATGGGACCCTCGTGGCCACTTACG AGAGCGCTTTCCCCGGTGAATACCTAGTGTATGTTGAAGCGGTTGTCATC AGCAACCACGACGAGGGGGTCCCCATCAAGGGCAGTCCGTTCTCACTTAC AATTACTGGAGATCCAGCTGTTGATATCGACACGTTGCCGACGTGCGAAA TTGGGAATGGGAACGGCGAGGACTTTTTCTGGAATACCGGAACGTGGGTT TCTTCGAACATCGCCAGCGCGGAGCACGGTGTCACCAGAGACGGATGGGT GTTCCAGCCGAAGACCTGCGTCTATGACACATTCTCGTACGACGACCTCA TGTTACTAGCCAGCCTGAGCGAGCCAACGTGGGTGTTAATTTTGGGGGGA TCCGTTCAGCGAGGTCTGTACTTGATGTTGGTCGACATGATTCTGGCCCA AGGACAGAAAGACGACTTCGGCAGTAGCTCTATCCAGAAATGCTGGGGTT ACGCCGACATCACAGTAGGGAATCTTCGCGTTACATATCAGGTGGGTACG TCACATTCTTCTCGCGGTTACTCGATTTTACATGGGCTGAGACTCATGAT CAAATTTTGTTTCGAAAGGGGTGCTTTGTTTGGTACCTTCGACGCAGGAG ACGTGGTTGATGTTTTGGTTCGCTCATCTCAACGATGCCGCGTTCGATTG CGTTCCGTCCGCGCAGGATATGCGCCTTTGGAGGGTCGGCAGTGGGAAAG AATCCGTGGAATGCAACAACGAAAAACTTGTCACCGGGAGCTCGACAGCG TACATCCGCTCGTCTAAACAACTTCTTCAGTCGACCGTGTTTCGGTACGG ATATCCGATGCCAACCGTCATCGTCGCTCCCTCCTTCCTTCGAAGTGGCG ATGATTCGCCTGAAATAACTGTCGATGTATGTTAAGACAGTATTGATGTT TGTGAATAAATGTCGATGTTGACTTATTAAGGGTGTCATGGTCTTTCGAA GTAGCATGGTCGCTGTCAACTGCCGTAGGCGAGCCAAACGCACGCTCCCC GCGTGTGCGTGCCCAATCCCTCACAAGACGCCCTACTTAGATATTCACGC CTCAAGACTCCGTGCATGCCATTCACGTCACATTTGGATGAAACTTGTAC CACTATGTCCTGACTAACCTTAAAGGCGGCAACAGCGAATTTCCCGGACC GCCCAAAGAGCTCAACGGGGAAAGCACGACCCTGCTCCACTTCGTTCCTG CGGTATCGATGTGATGTTCGCACCATCATCGATTTATGATGGCTCTACGA AGTCATGTAGTTTCCTCTCGTGGCCGGCCTATTATAGCTCCTTATGAACT CGATGGGTTACGGAAGTTCGACGTACCTTACCACCAGTCGTTTTGGCCGC GTGTCATCAGGTGCTGAAGGATGCGCTGCCCTCCACATGGCATGGAACTC TCTTCATGCTTCAACATATGAGCGGATTGGTGAGTATCGTCCATAACATT GCGGGCGAATCGATTTTGTTATTTTTCTTAATGCATACATACGTCATAGT CTATATGTTTTAACAGAGCAGATTTTTACGTAGGGTCTCACTTACGGCAG ATAGGCCTCAACGTACCAGGTTACCAATCCCACCTACTGTAACGTCGCCA CCTTGCCTGTGGTCACTTAGGATCTTCCCATCTCTCACCAGGTCTCTTCT ATGAGTTTCCATCGCAATGCGAGTTCAGCATTCTTACACCTCGCCAATCA ATGGTTGGATTTTACTTACTCGCGTTCTCAAGCTTTCCGCTTCGGCAACC AGAATTAAAATCTTGATTCTGTCAAGAATCGAACTCGCGACCTCCTCAGT AGTGGTCGATGAGGTTATATATCACTCACTCTACTTGGACGACGACTTGC GGTGTCCCAGTGGGGGTGAAAAAACAGTTATAATCCATAAAGTTGTTTGA GTTATTAATTCGTTACCATGCGGCGCAACGGACGGGGGAAAAAAATATCC ACACTTGGGTGAAAGCAGGGTACTTATTGGCAGTTCAACAATCCCACAAG GACCGCATGGCAAGATGTCGGCATCAAGTACCACGGCAGTGCACCCTTAG ACGATGCTGGGCTTCGGAAAATGGAGAGCTACCGTGAGCAAGATCCGCGG GTGGTCTTCATGAGCACGTTCCCGGTATTTGTATAATTTCAGTGTTACCT GAGACTTTTTTTGCGGGTAGTACGAACAACAAATATTATTCTTATGGATT GTATACTCGGAGGCAAACTCTGTACCATATACTGAGTACTATCTTACCTA GATAAACGTACGAGTGGGTGGTCAAATTAAATGTAATGAGCGCATATGAA AATAAAACATCAAAGTAGTTTTACCACTAAGGCTTCCCAGTACTCAAGAC TCGTCGAGGTTTTAATACACCACGCAAAACAGAAGAGACATCAAAAGAGA CGTGAGACGAGACAAGAGGTCTGGATAAAAGTGTGACGATCAGAAGAGAC ATCAGACACATCAGGCGCTCCCCAGCGGAAATCGAAAAATATACATGTCA GTCGCGCTATTTGTAGCTTTTACAGCACAGCAGCGTTTTTCCTTCTGTAT ACGATTAATTCTTCCCCAAATACGTGCCTGCCAAAGAAAGGTATGTTTGT TGCTATGACTAAAGAAGTTGTCTAGAAATCAGTATGTCTCTAGATTTGCT GGACTTATTCCGGCGAGTGGAGCACTCTAAAGTAAAGTGCCCACATACTT GCGTGGCACCCATACTCCCTTTGGCGCAATCGAATTTGAGTTGCACCTAT ATTCCCTTTCGCTCAATCGAATTCGAGTTTTGAAGTGAGGAAAACTCGTT CGATAGCTGAGAGGGACCTTTTTGGGCAGCGTAGCCACAAATCACTCCGG GCAGATGGCCGGCACACGACTCGAGCCACTCAGTTCACCTTTCAGGAGCG CTAGCTTTACACGAAACGCATGGTATCCGCGCCAAGAGGCCTCCTATATA GTACCGTAATTAATAGAAGCTCACCTTCATACTGGTTATAAGTTATGACA GCGAGCATACTCGTATGACAGCGAGTTTAATCGCTCGAGTATTGAACGTC CTATTATGGCATCCGACTTCGTTTTTACATTGTAAAAAGCTTCCGAGCTA TCAAGCACACCACCCGTGCAAACCGTGACGGAGTAAAGTGTAGACGGAAA ACAACACCCCGACGCGTAATGTAGGGGGCGAGAGACGCATTCTTCCTCTT GAGGCCATTCATCGTGATATCAATAGGAGGAACGATATGTAGCACAGGAC AGTACACTGTACAAGTACGCGTACTTGATACTATACAGCAGATAAGATCA ATACCCATCCATTCTCAGTATACCCGTGTACAGTTAAATTAACAAGAGAT CAAGCACAGCATCCATTTCGGACAGTAGAGTAGGCTTCCTCCAAGTCTCG TTTCTCCTCGCACTTGCCCCCGCGACCTGCACGTCCAGATGTATCAAGCC AAGCTCTTCGAAAACCAAAACACTAGGGACGGGAAAAGAAGCTATGGAGG CAGTCAGCACTATCACTACGTGGTGGCGTCAAGCGAACCTGTAACCTACA ATGGCTCTAAGATGGTACACTCCAGCATATTGGAGATGATATCGCACGTG AGTATCTTTGATGTAGAGCCCAGATTCGTGCAGGATTATCCTCCCACGCC CCCTCGCCCGCCTGACTCTACTCTTCCCCCAAACAGTGCACTAACCCCCC CCCCCCCTCCCCCCTCCTTCTCCTATCAATTCTGCTGCTGCATTCGACCC TAAACAATGGAAACCCCTCCTCAAAACGTTTCCGAAGTTGAGGGTACACA CCACCACGTTGATGCAGTAGCAAGCATCATGAGCACATCTATTGTTTTTA AATGGTGTTACTTGGCAGGTATCTACTCTACATGTTGCGCCTTTGGTCAT TTCACAATATATGGGAAGTGGAAACCCCGGGAATCGGGGACTGAGCGACA TGTTCCGATTTTAGATCTCGGGACTCGTATACAGTGTGTCTCTGAATCCT AAAGATTTCAACTTTGTAATTATGGAGCACGGGGACACGACGACATCATG CTACCCTCTGAAGGTTTTTTGTTTCCAGATGTTGTTTTACGAAGGAGGAA AGGTGGGTGTACATCATCTATATCTTCCCTCAGTATTATTTACTTCGTAC ACATTTGGATGAGGGGGGCCTGGATGAAAGAAGGGTGGCGAGGAGGAATG TTGTTGGGAAGTGGACACCTTGGCGATGAGGGTATAGGCGATGCGCACCA AAAAATATCAACAGCCAAACCTGGGACTCTCCATGTGTTGATGACGATCG CGACGACTCGAGTCATTGGAGGTCTATCCACCGTCATGACGAGTCTACCA ACAATGTCGCCTATGAATGCAACTGTCCGCGTTTGTGCTTGTCCGTATCA CATATGCTTGTATAACCAGACTTTACGAGAACTCTACACCCTGCGTCACT CCACGTAGTAACAGGGTCGCAAACGAATCGTTTGAAACTCCTTATCCTCA GCTCAATTTTTCTGTCCGCCGTTCTGATTCATACATTCTACTGATTCCTA GATCATCATTGCCACGACTGTTGAGGGGAAAGCTGCGTTCCTCGAGAAAG TGGCAGCGACCCCGGACATCGGGCGCCAGACTTCGGCCGTCCGACGGACC TTCGAGGTGGGCTTCTATAGACTATTTCACGCGGGCCCAATTTCCCGCGA TTTCGTTACAATTAGGTGGCATACATGTGAAAACCCGTTGAAATTTTTCC TAACGCGGGGATGGCGGCACACCGTGATAATGAATGCCACTTTACTAAGA GGATAAGCAGTTAGTTCAATTGATATTTGCGGGGTGGGAAAAGATTGGCT CCTCGCTTTAGACACCACATCGTCTAACCGCTCCTGTCTGCCTCGTCCCA AACTCTTCGGTGGCAGCTATGCACGGATTGTCCAGCTGGCCTACTGCCAT TCCACGTGAAGTCAGTTCCAGAACCCGTGTGTAAGAGAGCCATGTCTTTG CCAGGCAATGCATCGACGGGTGAGGTCTGGAACAACGAGTTATGCCCCGA CTGGTGCCTAGCCACAGAGCCAGTCGACCAAACTCCCACCGAGTCCGGCT TGGTGGACGTTCGTATCTGCGAGTTAAAGGACGGCGAATGATTTACGTAA CAATACGAAGATTCGGGTAGACATCCTGAGGGTGAGGGGGCGTCTTTTAT CTCCTCCGCCATAGGAACTTGTCTTTCGCGTCGAATAACAGGATATTCGA GATAAGTCAGCTGATGTCCGTAGGAGGTAATAACGGGGGATGGTGCTTCT ACCGATCCAAAATCGGGCTGGTGATTTCGATTTAAGTATCGGTGACCACG GTGACGCCTCGAGACACTCAGCGGAAAACGCTAAAGAGGTACGGGGCTGT CTTTATTTTGACGGGTGTATGATGGTAACGGGGCTGGGATGGCGCGTTCT TTCCGCTACAAAGAGAATTATCGTCTTAGTAGGTTTTCTACATTTTCCTC ATAGGGTCACTTTTATTGGAGAGGGAAGAATGTCAAGTTGTGTCAAACAC ACTTGATTAAAACCCACGTATCGCCATCAACAAGCTAAAAGTGAGAAGAC GTGCGAAAAGGACGCCAGTTACGTACAGGTACTACATGGTACTATCCGTT TCAATAATGTATAGAGTTACTACGGGCCTGC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1021:57051..62981-

>mRNA_F-serratus_M_contig1021.289.1 ID=mRNA_F-serratus_M_contig1021.289.1|Name=mRNA_F-serratus_M_contig1021.289.1|organism=Fucus serratus male|type=CDS|length=3180bp|location=Sequence derived from alignment at F-serratus_M_contig1021:57051..62981- (Fucus serratus male)
ATGGCCGGCGAGGCGGCATCGTTTACGATTCGCGTAGCAAGGGAGGAAGG
GGAAAGTCCAGCTGTCGATAGCTGGAATGTGGACGACGGAACATTTTTTT
ACGTCTGGATAGCCAATGAGGACCAGATTTTTACCGCGGAAGTAGTCAAC
AACGGGGATGGGACCCTCGTGGCCACTTACGAGAGCGCTTTCCCCGGTGA
ATACCTAGTGTATGTTGAAGCGGTTGTCATCAGCAACCACGACGAGGGGG
TCCCCATCAAGGGCAGTCCGTTCTCACTTACAATTACTGGAGATCCAGCT
GTTGATATCGACACGTTGCCGACGTGCGAAATTGGGAATGGGAACGGCGA
GGACTTTTTCTGGAATACCGGAACGTGGGTTTCTTCGAACATCGCCAGCG
CGGAGCACGGTGTCACCAGAGACGGATGGGTGTTCCAGCCGAAGACCTGC
GTCTATGACACATTCTCGTACGACGACCTCATGTTACTAGCCAGCCTGAG
CGAGCCAACGTGGGTGTTAATTTTGGGGGGATCCGTTCAGCGAGGTCTGT
ACTTGATGTTGGTCGACATGATTCTGGCCCAAGGACAGAAAGACGACTTC
GGCAGTAGCTCTATCCAGAAATGCTGGGGTTACGCCGACATCACAGTAGG
GAATCTTCGCGTTACATATCAGATGGCCGGCGAGGCGGCATCGTTTACGA
TTCGCGTAGCAAGGGAGGAAGGGGAAAGTCCAGCTGTCGATAGCTGGAAT
GTGGACGACGGAACATTTTTTTACGTCTGGATAGCCAATGAGGACCAGAT
TTTTACCGCGGAAGTAGTCAACAACGGGGATGGGACCCTCGTGGCCACTT
ACGAGAGCGCTTTCCCCGGTGAATACCTAGTGTATGTTGAAGCGGTTGTC
ATCAGCAACCACGACGAGGGGGTCCCCATCAAGGGCAGTCCGTTCTCACT
TACAATTACTGGAGATCCAGCTGTTGATATCGACACGTTGCCGACGTGCG
AAATTGGGAATGGGAACGGCGAGGACTTTTTCTGGAATACCGGAACGTGG
GTTTCTTCGAACATCGCCAGCGCGGAGCACGGTGTCACCAGAGACGGATG
GGTGTTCCAGCCGAAGACCTGCGTCTATGACACATTCTCGTACGACGACC
TCATGTTACTAGCCAGCCTGAGCGAGCCAACGTGGGTGTTAATTTTGGGG
GGATCCGTTCAGCGAGGTCTGTACTTGATGTTGGTCGACATGATTCTGGC
CCAAGGACAGAAAGACGACTTCGGCAGTAGCTCTATCCAGAAATGCTGGG
GTTACGCCGACATCACAGTAGGGAATCTTCGCGTTACATATCAGGATATG
CGCCTTTGGAGGGTCGGCAGTGGGAAAGAATCCGTGGAATGCAACAACGA
AAAACTTGTCACCGGGAGCTCGACAGCGTACATCCGCTCGTCTAAACAAC
TTCTTCAGTCGACCGTGTTTCGGTACGGATATCCGATGCCAACCGTCATC
GTCGCTCCCTCCTTCCTTCGAAGTGGCGATGATTCGCCTGAAATAACTGA
TATGCGCCTTTGGAGGGTCGGCAGTGGGAAAGAATCCGTGGAATGCAACA
ACGAAAAACTTGTCACCGGGAGCTCGACAGCGTACATCCGCTCGTCTAAA
CAACTTCTTCAGTCGACCGTGTTTCGGTACGGATATCCGATGCCAACCGT
CATCGTCGCTCCCTCCTTCCTTCGAAGTGGCGATGATTCGCCTGAAATAA
CTGTGCTGAAGGATGCGCTGCCCTCCACATGGCATGGAACTCTCTTCATG
CTTCAACATATGAGCGGATTGGTGCTGAAGGATGCGCTGCCCTCCACATG
GCATGGAACTCTCTTCATGCTTCAACATATGAGCGGATTGGGTACTTATT
GGCAGTTCAACAATCCCACAAGGACCGCATGGCAAGATGTCGGCATCAAG
TACCACGGCAGTGCACCCTTAGACGATGCTGGGCTTCGGAAAATGGAGAG
CTACCGTGAGCAAGATCCGCGGGTGGTCTTCATGAGCACGTTCCCGGGTA
CTTATTGGCAGTTCAACAATCCCACAAGGACCGCATGGCAAGATGTCGGC
ATCAAGTACCACGGCAGTGCACCCTTAGACGATGCTGGGCTTCGGAAAAT
GGAGAGCTACCGTGAGCAAGATCCGCGGGTGGTCTTCATGAGCACGTTCC
CGATGTATCAAGCCAAGCTCTTCGAAAACCAAAACACTAGGGACGGGAAA
AGAAGCTATGGAGGCAGTCAGCACTATCACTACGTGGTGGCGTCAAGCGA
ACCTGTAACCTACAATGGCTCTAAGATGGTACACTCCAGCATATTGGAGA
TGATATCGCACATGTATCAAGCCAAGCTCTTCGAAAACCAAAACACTAGG
GACGGGAAAAGAAGCTATGGAGGCAGTCAGCACTATCACTACGTGGTGGC
GTCAAGCGAACCTGTAACCTACAATGGCTCTAAGATGGTACACTCCAGCA
TATTGGAGATGATATCGCACATCATCATTGCCACGACTGTTGAGGGGAAA
GCTGCGTTCCTCGAGAAAGTGGCAGCGACCCCGGACATCGGGCGCCAGAC
TTCGGCCGTCCGACGGACCTTCGAGATCATCATTGCCACGACTGTTGAGG
GGAAAGCTGCGTTCCTCGAGAAAGTGGCAGCGACCCCGGACATCGGGCGC
CAGACTTCGGCCGTCCGACGGACCTTCGAGCTATGCACGGATTGTCCAGC
TGGCCTACTGCCATTCCACGTGAAGTCAGTTCCAGAACCCGTGTGTAAGA
GAGCCATGTCTTTGCCAGGCAATGCATCGACGGGTGAGGTCTGGAACAAC
GAGTTATGCCCCGACTGGTGCCTAGCCACAGAGCCAGTCGACCAAACTCC
CACCGAGTCCGGCTTGGTGGACGTTCGTATCTGCGAGTTAAAGGACGGCG
AATGACTATGCACGGATTGTCCAGCTGGCCTACTGCCATTCCACGTGAAG
TCAGTTCCAGAACCCGTGTGTAAGAGAGCCATGTCTTTGCCAGGCAATGC
ATCGACGGGTGAGGTCTGGAACAACGAGTTATGCCCCGACTGGTGCCTAG
CCACAGAGCCAGTCGACCAAACTCCCACCGAGTCCGGCTTGGTGGACGTT
CGTATCTGCGAGTTAAAGGACGGCGAATGA
back to top