mRNA_F-serratus_M_contig102.271.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig102.271.1 vs. uniprot
Match: A0A7R9ZBQ9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBQ9_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.030e-7 Identity = 38/125 (30.40%), Postives = 61/125 (48.80%), Query Frame = 1 Query: 2074 EALARGIEVNGKICNAALLGFGSD-ITGAIKFWRQRIGPA-LEQKYKDKDKDKEARNDDCPSVQNMKKERYNDLFSAYCGLLHVCGRAQRPDAALKVVFASRRDGIRPSSILSNTYFKAKQEAQD 2442 EA+ G+ +G+ NA L FG D + A++ W+ + PA L + + +L +AY GLLHVCGRA RPD AL++V+A ++G+ + N Y K+ ++ Sbjct: 2 EAMRDGVPADGRFLNACLRCFGGDRLDEALEVWKTEMRPAALAHENRXXXXXXXXXXXXXXXXXXXXXXXXXNLLAAYHGLLHVCGRADRPDVALRLVYAMGKEGLEATETSLNCYNAGKRTREN 126
BLAST of mRNA_F-serratus_M_contig102.271.1 vs. uniprot
Match: A0A1E7FI57_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FI57_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.660e-7 Identity = 39/136 (28.68%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 2044 SANMCERLYVEALARGIEVNGKICNAALLGFGSDITGAIKFWRQRIGPALEQKYKDKDKDKEARNDDCPSVQNMKKERYN-DLFSAYCGLLHVCGRAQRPDAALKVVFASR-RDGIRPSSILSNTYFKAKQEAQDR 2445 + ++ +++ A GI+ +G+ NA +G DI GA+ W++ I A Q N+D +++ K N ++ +AY GL++VCGRA+RPD A+++V+A + ++G+ P+ N Y+ + + R Sbjct: 1005 TTSLALQIFRIASRAGIQADGRFVNAIFRCYGDDIVGALDGWKKEIRKATTQ------------NEDRRNLKEPKSAVKNKNMLAAYNGLIYVCGRAERPDIAVRIVYAMKNKEGLEPNE---NPYYNYRSGKRTR 1125 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig102.271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig102.271.1 >prot_F-serratus_M_contig102.271.1 ID=prot_F-serratus_M_contig102.271.1|Name=mRNA_F-serratus_M_contig102.271.1|organism=Fucus serratus male|type=polypeptide|length=815bp MKWAAGQVLFTGSTNFNLVPFVGTCKLSRPSRAVLYGIPSLRRAKGHQSRback to top mRNA from alignment at F-serratus_M_contig102:676507..702402- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig102.271.1 ID=mRNA_F-serratus_M_contig102.271.1|Name=mRNA_F-serratus_M_contig102.271.1|organism=Fucus serratus male|type=mRNA|length=25896bp|location=Sequence derived from alignment at F-serratus_M_contig102:676507..702402- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig102:676507..702402- >mRNA_F-serratus_M_contig102.271.1 ID=mRNA_F-serratus_M_contig102.271.1|Name=mRNA_F-serratus_M_contig102.271.1|organism=Fucus serratus male|type=CDS|length=4890bp|location=Sequence derived from alignment at F-serratus_M_contig102:676507..702402- (Fucus serratus male)back to top |