mRNA_F-serratus_M_contig102.270.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: Q2TUA3_DICDH (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUA3_DICDH) HSP 1 Score: 172 bits (435), Expect = 1.050e-47 Identity = 85/133 (63.91%), Postives = 104/133 (78.20%), Query Frame = 1 Query: 1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILY 399 VI ++GYAT+S SHFAYWLGS AFCTAFY I+LL+LC L E NG R L+LSA+EG W IG VLG+LA PS+F+GY RDLFIGLG +FWGNS+F +LS+IDA+FM T K +PL LS+LGG L F++Y Sbjct: 404 VILEIGYATYSNVSHFAYWLGSFAAFCTAFYSIRLLALCFLSESNGPRHLILSATEGGWIIGSVLGILALPSIFIGYLGRDLFIGLGTNFWGNSIFILPEHLSLIDAEFMPTIMKLLPLCLSVLGGGLSFLVY 536
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A8F0FDL8_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FDL8_9PHAE) HSP 1 Score: 159 bits (403), Expect = 5.050e-43 Identity = 77/133 (57.89%), Postives = 97/133 (72.93%), Query Frame = 1 Query: 1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILY 399 VI ++ YAT++ SHF YW GS +AFCT+FY ++LL+LC LVEPNGSRS +LSASEG W +GL LGLLA PS+F GY +DL IGLG FWGNSLF NL++IDA+F+ K P LS+LG + F+ Y Sbjct: 404 VILEISYATYTGPSHFVYWFGSLSAFCTSFYSVRLLALCFLVEPNGSRSSILSASEGNWFMGLPLGLLAIPSIFSGYICKDLLIGLGTGFWGNSLFILPVNLTLIDAEFLPIYIKLFPTFLSLLGAYFSFLFY 536
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A8E8PF72_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PF72_9PHAE) HSP 1 Score: 149 bits (375), Expect = 3.100e-39 Identity = 76/133 (57.14%), Postives = 95/133 (71.43%), Query Frame = 1 Query: 1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILY 399 ++ +V YAT+S +HFAY+LG+ AFCTAFY +LL LC L EP GSR LL A+EG WAI L LGLLA PS+F+GY +RDLFIGLG DFWGNS+F N +ID ++M K +PLL+S+ G L F LY Sbjct: 404 IVLEVAYATYSTRAHFAYFLGAFGAFCTAFYSFRLLYLCFLSEPRGSRVGLLPAAEGGWAISLSLGLLAIPSIFIGYLARDLFIGLGSDFWGNSIFSLPTNSVLIDGEYMPLHIKMLPLLMSISGLLLGFYLY 536
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A7S6ZPE4_9STRA (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPE4_9STRA) HSP 1 Score: 143 bits (360), Expect = 3.850e-37 Identity = 69/134 (51.49%), Postives = 93/134 (69.40%), Query Frame = 1 Query: 1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 402 +I +V Y +++ +HFAY LG+ AFCTAFY +L+ L L E NG R LLL ASE W I LG+LA PS+F+GY +DLFIGLG FWGN+ F +LS++DA+FM T+ K +P+ LS++G L F+LYR Sbjct: 404 LILEVAYGSYTTGAHFAYALGTLAAFCTAFYSFRLIYLSFLSEANGRRPLLLGASESSWPISTALGILAIPSIFIGYLGKDLFIGLGTPFWGNAFFALPGHLSLVDAEFMPTAMKILPVCLSIVGAILAFVLYR 537
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A8E7IX57_9STRA (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Attheya longicornis TaxID=451786 RepID=A0A8E7IX57_9STRA) HSP 1 Score: 123 bits (309), Expect = 4.490e-30 Identity = 60/133 (45.11%), Postives = 91/133 (68.42%), Query Frame = 1 Query: 1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILY 399 VI +V Y + H++Y LGS AF TAFY +LL L L +PNG +S++ SA + + I + L +L+ PS+F+GY+++D+ IGLG DFWGNSLF S N++++DA+F+ K +P++LS+ G L F+LY Sbjct: 423 VILEVAYGKFNSQGHYSYLLGSVGAFLTAFYSTRLLYLTFLTKPNGYKSVICSAYDSSYQISIALAILSIPSIFIGYYTKDMIIGLGTDFWGNSLFVLSENMNMLDAEFIPHLYKLLPVILSLSGASLSFLLY 555 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig102.270.1 >prot_F-serratus_M_contig102.270.1 ID=prot_F-serratus_M_contig102.270.1|Name=mRNA_F-serratus_M_contig102.270.1|organism=Fucus serratus male|type=polypeptide|length=138bp VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLback to top mRNA from alignment at F-serratus_M_contig102:643983..644396+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig102.270.1 ID=mRNA_F-serratus_M_contig102.270.1|Name=mRNA_F-serratus_M_contig102.270.1|organism=Fucus serratus male|type=mRNA|length=414bp|location=Sequence derived from alignment at F-serratus_M_contig102:643983..644396+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig102:643983..644396+ >mRNA_F-serratus_M_contig102.270.1 ID=mRNA_F-serratus_M_contig102.270.1|Name=mRNA_F-serratus_M_contig102.270.1|organism=Fucus serratus male|type=CDS|length=828bp|location=Sequence derived from alignment at F-serratus_M_contig102:643983..644396+ (Fucus serratus male)back to top |