mRNA_F-serratus_M_contig102.270.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A8D5Z619_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Tinocladia crassa TaxID=185802 RepID=A0A8D5Z619_9PHAE) HSP 1 Score: 185 bits (470), Expect = 2.200e-56 Identity = 92/134 (68.66%), Postives = 105/134 (78.36%), Query Frame = 1 Query: 1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 402 VI +VGYAT+S ASHF YWLGS A CTAFY I+LL+LC L E G+RSL LSASEG W + +VLG+LA PSMF+GYF RDLFIGLG DFWGN+LFC NLSIIDA+FMST K +PL SM+GG FILYR Sbjct: 5 VILEVGYATYSSASHFVYWLGSLAALCTAFYSIRLLALCFLSESKGTRSLTLSASEGNWPMSVVLGILAIPSMFIGYFCRDLFIGLGTDFWGNALFCLPSNLSIIDAEFMSTHIKLLPLCFSMMGGLASFILYR 138
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A1Z4F5Q1_9PHAE (NADH-ubiquinone oxidoreductase chain 5 (Fragment) n=2 Tax=Ecklonia TaxID=105406 RepID=A0A1Z4F5Q1_9PHAE) HSP 1 Score: 184 bits (468), Expect = 4.420e-56 Identity = 93/134 (69.40%), Postives = 107/134 (79.85%), Query Frame = 1 Query: 1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 402 VI +VGYAT+S ASHFAYWLGS +AFCTAFY I+LL LC LVEPNGSRSLLLSASE W +GLVLG+LA PSMF+GY RDLFIGLG DFWGNSLF +LSI+DA+FM+ K PL S+ GG + FILY+ Sbjct: 5 VILEVGYATYSNASHFAYWLGSLSAFCTAFYSIRLLVLCFLVEPNGSRSLLLSASESGWPMGLVLGILALPSMFIGYLGRDLFIGLGTDFWGNSLFYLPNHLSIVDAEFMAFDLKIFPLCCSIAGGLVSFILYK 138
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A1I9LW32_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW32_9PHAE) HSP 1 Score: 194 bits (493), Expect = 4.850e-56 Identity = 95/134 (70.90%), Postives = 112/134 (83.58%), Query Frame = 1 Query: 1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 402 VI +VGYAT+S SHFAYWLGS AFCTAFY I+LL+LC L EPNGSR ++LSASEG W +G+VLG+LA PS+F+GYFSRDLFIGLG DFWGN+LFC NLSIIDA+FMSTSTK +PL S++G L FILY+ Sbjct: 404 VILEVGYATYSNVSHFAYWLGSFAAFCTAFYSIRLLALCFLSEPNGSRIIVLSASEGSWPMGVVLGILAIPSIFIGYFSRDLFIGLGSDFWGNALFCLPNNLSIIDAEFMSTSTKILPLCFSIIGAGLSFILYK 537
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: Q2TUE3_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Desmarestia TaxID=31339 RepID=Q2TUE3_9PHAE) HSP 1 Score: 192 bits (487), Expect = 3.570e-55 Identity = 94/134 (70.15%), Postives = 110/134 (82.09%), Query Frame = 1 Query: 1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 402 VI +VGYAT+S ASHFAYWLGS AFCTAFY I+LL+LC L EPNGSRSL+LSASEG ++G+VLGLLA PS+F+GY RDLFIGLG DFWGN+LFC NLSI+DA+FMST+ K PL SM+GG F+LYR Sbjct: 404 VILEVGYATYSNASHFAYWLGSFAAFCTAFYSIRLLALCFLAEPNGSRSLILSASEGGSSMGIVLGLLAIPSIFIGYLGRDLFIGLGTDFWGNALFCLPINLSIVDAEFMSTNIKIFPLCCSMIGGVFSFLLYR 537
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A0U1XC76_SCYLO (NADH-ubiquinone oxidoreductase chain 5 n=6 Tax=Ectocarpales TaxID=2877 RepID=A0A0U1XC76_SCYLO) HSP 1 Score: 191 bits (486), Expect = 4.980e-55 Identity = 93/134 (69.40%), Postives = 109/134 (81.34%), Query Frame = 1 Query: 1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 402 VI ++ YA++S ASHFAYWLGS A CTAFY I+L++LC L EPNGSR LLSASEG W +GLVLG+LA PS+F+GYFSRDLFIGLG DFWGN+LFC NL+IIDA+FMS TK +PL LSMLGG FILY+ Sbjct: 404 VILEISYASYSSASHFAYWLGSFAALCTAFYSIRLIALCFLSEPNGSRRFLLSASEGSWPMGLVLGILAVPSIFIGYFSRDLFIGLGTDFWGNALFCLPSNLNIIDAEFMSIGTKILPLCLSMLGGLASFILYK 537
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: Q94YZ3_PYLLI (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94YZ3_PYLLI) HSP 1 Score: 188 bits (477), Expect = 9.890e-54 Identity = 91/134 (67.91%), Postives = 108/134 (80.60%), Query Frame = 1 Query: 1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 402 VI +VGY+ +S SHFAYWLGS AFCTAFY I+L++LC L EPNG RSLLLSASE W +GLVLG+LA PS+F+GY SRDLFIGLG DFWGN+LFC NL+IIDA+FM+TS K +PL LSM G L F+LY+ Sbjct: 404 VILEVGYSAYSNVSHFAYWLGSFAAFCTAFYSIRLIALCFLSEPNGGRSLLLSASESSWPMGLVLGILAIPSIFIGYLSRDLFIGLGTDFWGNALFCLPVNLNIIDAEFMTTSIKIIPLCLSMSGALLSFVLYK 537
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A8F0FDC2_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0FDC2_9PHAE) HSP 1 Score: 187 bits (474), Expect = 2.680e-53 Identity = 95/134 (70.90%), Postives = 107/134 (79.85%), Query Frame = 1 Query: 1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 402 VI +VGYAT+S ASHFAYWLGS AFCTAFY I+LL+LC LVEPNGSRS+LLSASEG IGLVLGLLA PS+F+GY RDLFIGLG DFWGN+LFC NL+I+DA+FM T K PL S+LGG FI YR Sbjct: 404 VILEVGYATYSNASHFAYWLGSFAAFCTAFYSIRLLALCFLVEPNGSRSVLLSASEGGVFIGLVLGLLAIPSIFIGYLGRDLFIGLGTDFWGNALFCLPVNLTIVDAEFMLTRIKLFPLCCSVLGGVSSFIFYR 537
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A0U1V1M9_SARFS (NADH-ubiquinone oxidoreductase chain 5 n=28 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1V1M9_SARFS) HSP 1 Score: 186 bits (472), Expect = 5.190e-53 Identity = 94/134 (70.15%), Postives = 110/134 (82.09%), Query Frame = 1 Query: 1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 402 VI ++ YAT+S +HF+YWLGS AFCTAFY I+L++LC LVEPNGSR LLLSASEG AIG VLGLLA PS+FVGYFSRDLFIGLG FWG+SLFC NLS+IDA+FMST +K +PL LS++GG L F LYR Sbjct: 404 VILEIAYATYSIPAHFSYWLGSLAAFCTAFYSIRLIALCFLVEPNGSRKLLLSASEGGKAIGFVLGLLAIPSIFVGYFSRDLFIGLGTHFWGSSLFCLPSNLSLIDAEFMSTFSKMLPLCLSIVGGALSFTLYR 537
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A3G5FPL7_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=Ectocarpales TaxID=2877 RepID=A0A3G5FPL7_9PHAE) HSP 1 Score: 186 bits (472), Expect = 5.190e-53 Identity = 90/134 (67.16%), Postives = 107/134 (79.85%), Query Frame = 1 Query: 1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILYR 402 VI + YAT+S A+HFAYWLGS AFCTAFY I+LL+LC L EPNGSR L+LSASEG W +G+VLG+LA PS+F+GY S+DLFIGLG DFWGN+LFC NLSIIDA+FM T K +PL S++GG FILYR Sbjct: 404 VILEASYATYSSAAHFAYWLGSFAAFCTAFYSIRLLALCFLSEPNGSRLLILSASEGSWPMGIVLGILAVPSIFIGYLSKDLFIGLGTDFWGNALFCLPDNLSIIDAEFMPTGIKILPLCFSIMGGLASFILYR 537
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Match: A0A4Y5T8T8_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8T8_9PHAE) HSP 1 Score: 174 bits (442), Expect = 1.050e-48 Identity = 86/133 (64.66%), Postives = 101/133 (75.94%), Query Frame = 1 Query: 1 VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLLLSASEGCWAIGLVLGLLAFPSMFVGYFSRDLFIGLGIDFWGNSLFCFSFNLSIIDAKFMSTSTKTMPLLLSMLGGFLRFILY 399 V+ +VGYATHS SHFAYWLG AFCTAFY I+LL LC L EPNGSR LL+SASE W +G VLG+LA PS+F GY RDLFIGLG FWGNS+F +LSIIDA+FM T+ K +PL+ S++GG L F LY Sbjct: 404 VVLEVGYATHSFVSHFAYWLGGFAAFCTAFYSIRLLVLCFLSEPNGSRFLLMSASESSWIMGTVLGVLAIPSIFAGYLGRDLFIGLGTTFWGNSIFILPSHLSIIDAEFMPTTMKLLPLIFSLVGGLLSFFLY 536 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig102.270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig102.270.1 >prot_F-serratus_M_contig102.270.1 ID=prot_F-serratus_M_contig102.270.1|Name=mRNA_F-serratus_M_contig102.270.1|organism=Fucus serratus male|type=polypeptide|length=138bp VISKVGYATHSPASHFAYWLGSSTAFCTAFYPIQLLSLCSLVEPNGSRSLback to top mRNA from alignment at F-serratus_M_contig102:643983..644396+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig102.270.1 ID=mRNA_F-serratus_M_contig102.270.1|Name=mRNA_F-serratus_M_contig102.270.1|organism=Fucus serratus male|type=mRNA|length=414bp|location=Sequence derived from alignment at F-serratus_M_contig102:643983..644396+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig102:643983..644396+ >mRNA_F-serratus_M_contig102.270.1 ID=mRNA_F-serratus_M_contig102.270.1|Name=mRNA_F-serratus_M_contig102.270.1|organism=Fucus serratus male|type=CDS|length=828bp|location=Sequence derived from alignment at F-serratus_M_contig102:643983..644396+ (Fucus serratus male)back to top |