mRNA_F-serratus_M_contig1015.248.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Match: A0A836CD27_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD27_9STRA) HSP 1 Score: 139 bits (351), Expect = 7.320e-35 Identity = 83/212 (39.15%), Postives = 110/212 (51.89%), Query Frame = 1 Query: 1 GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFGYFLARQRSRINPPIDQGSQRQRGEDHGN----------REKVEKRNNDPTVAP---------------TSFLWAAYYPNRYYYEVCECLRRLLLTGLLVFVSPGTGVQVAYSCLFAFLSLFGFEMLRPHADRLERMLYRTGCLVIFFNNFLALVIKANVADADSDGATAYS 561 GKSYLRAD+ +EC T H Y +++ +MI VYP+GIPA + L R R+ R RG D G R E++ P P T FLW Y P YY+EV EC RRLLLTG+LVF+ PGT Q AY+C+FA+ S + PHA + +Y G ++F + F+AL I+A+ A D+ GA A S Sbjct: 827 GKSYLRADYAVECGTPQHYRYSLFSMLMIAVYPIGIPALYAVMLWRHRADFAAR----RARCRGGDGGGSSGLTAGLSVRYDSEQQQVAPAAEPRALRALAPAHLELSSTEFLWRPYRPEYYYWEVLECFRRLLLTGVLVFIRPGTPAQSAYACVFAYCSAVAYLRYAPHAGAADAAVYTGGASILFLSMFVALSIQADFAGTDTSGAAAVS 1034
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Match: A0A836CBB8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBB8_9STRA) HSP 1 Score: 137 bits (344), Expect = 3.770e-34 Identity = 77/170 (45.29%), Postives = 100/170 (58.82%), Query Frame = 1 Query: 7 SYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFGYFLARQRSRINPPIDQGSQRQRGEDHGNREKVEKRNNDPTVAPTSFLWAAYYPNRYYYEVCECLRRLLLTGLLVFVSPGTGVQVAYSCLFAFLSLFGFEMLRPHADRLERMLYRTGCLVIFFNNFLALVIK 516 +YLRAD+ I CYT H+A+ YAA MI VYP+GIPA F L R R QRQRGE V+ A +FLW Y N YYE EC+RRLLLTG+LVF++PGT Q A +C+FAF + ++ +RPH R + LY G +VIF + F AL+++ Sbjct: 433 AYLRADYSIRCYTPAHRAHMAYAAAMILVYPIGIPALFACTLRRHMLR---------QRQRGEALS----VDPPPTTEAAASAAFLWRPYRTNAPYYECAECVRRLLLTGVLVFITPGTAGQSAAACVFAFATSVAYDHVRPHRARSDACLYVVGYIVIFASMFTALLMQ 589
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Match: A0A835YVC3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVC3_9STRA) HSP 1 Score: 137 bits (344), Expect = 6.030e-34 Identity = 74/186 (39.78%), Postives = 105/186 (56.45%), Query Frame = 1 Query: 1 GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFG-----YFLARQRSRINPPIDQGSQRQRGEDHGNREKVEKRNNDPTVAPTSFLWAAYYPNRYYYEVCECLRRLLLTGLLVFVSPGTGVQVAYSCLFAFLSLFGFEMLRPHADRLERMLYRTGCLVIFFNNFLALVIKANVADADSD 543 G SYLR D+ IECYT H AY I+A +M+ YP+GIPA + F+AR+ DHG ++ K + FLW Y N +Y+EV EC+RRL+LTGLLVF+ PGT Q A +C+FA + G+E +RPH D + LYR G ++F + FL+L+++ + D S+ Sbjct: 473 GSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVARR------------------DHGQTSQLAK--------ASLFLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYDMWLYRIGYSIVFVSYFLSLLMQVSYTDEASE 632
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Match: A0A836CF41_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF41_9STRA) HSP 1 Score: 137 bits (344), Expect = 6.450e-34 Identity = 74/186 (39.78%), Postives = 105/186 (56.45%), Query Frame = 1 Query: 1 GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFG-----YFLARQRSRINPPIDQGSQRQRGEDHGNREKVEKRNNDPTVAPTSFLWAAYYPNRYYYEVCECLRRLLLTGLLVFVSPGTGVQVAYSCLFAFLSLFGFEMLRPHADRLERMLYRTGCLVIFFNNFLALVIKANVADADSD 543 G SYLR D+ IECYT H AY I+A +M+ YP+GIPA + F+AR+ DHG ++ K + FLW Y N +Y+EV EC+RRL+LTGLLVF+ PGT Q A +C+FA + G+E +RPH D + LYR G ++F + FL+L+++ + D S+ Sbjct: 1060 GSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVARR------------------DHGQTSQLAK--------ASLFLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYDMWLYRIGYSIVFVSYFLSLLMQVSYTDEASE 1219
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Match: A0A835YZ05_9STRA (UCH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ05_9STRA) HSP 1 Score: 137 bits (344), Expect = 6.480e-34 Identity = 74/186 (39.78%), Postives = 105/186 (56.45%), Query Frame = 1 Query: 1 GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFG-----YFLARQRSRINPPIDQGSQRQRGEDHGNREKVEKRNNDPTVAPTSFLWAAYYPNRYYYEVCECLRRLLLTGLLVFVSPGTGVQVAYSCLFAFLSLFGFEMLRPHADRLERMLYRTGCLVIFFNNFLALVIKANVADADSD 543 G SYLR D+ IECYT H AY I+A +M+ YP+GIPA + F+AR+ DHG ++ K + FLW Y N +Y+EV EC+RRL+LTGLLVF+ PGT Q A +C+FA + G+E +RPH D + LYR G ++F + FL+L+++ + D S+ Sbjct: 721 GSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVARR------------------DHGQTSQLAK--------ASLFLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYDMWLYRIGYSIVFVSYFLSLLMQVSYTDEASE 880 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1015.248.1 >prot_F-serratus_M_contig1015.248.1 ID=prot_F-serratus_M_contig1015.248.1|Name=mRNA_F-serratus_M_contig1015.248.1|organism=Fucus serratus male|type=polypeptide|length=189bp GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFGYFLARQRSRback to top mRNA from alignment at F-serratus_M_contig1015:143846..146399- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1015.248.1 ID=mRNA_F-serratus_M_contig1015.248.1|Name=mRNA_F-serratus_M_contig1015.248.1|organism=Fucus serratus male|type=mRNA|length=2554bp|location=Sequence derived from alignment at F-serratus_M_contig1015:143846..146399- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1015:143846..146399- >mRNA_F-serratus_M_contig1015.248.1 ID=mRNA_F-serratus_M_contig1015.248.1|Name=mRNA_F-serratus_M_contig1015.248.1|organism=Fucus serratus male|type=CDS|length=1134bp|location=Sequence derived from alignment at F-serratus_M_contig1015:143846..146399- (Fucus serratus male)back to top |