mRNA_F-serratus_M_contig1014.238.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1014.238.1 vs. uniprot
Match: A0A7S2LE35_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LE35_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 6.850e-17 Identity = 61/159 (38.36%), Postives = 92/159 (57.86%), Query Frame = 2 Query: 917 HKPVVS-TWGVFERPKDISKAFGGGRDPTLRKTDPEEARRREEATKALLRSFRGVSDEDLERERANEERIKKALALSKRAMKFGDTFGAVSALEAVKQDCSTHGPLGAVVFLELAMALEVTGRSYQAQDIYKVLRRSKNREVRAQAKRLNEGLEAMDML 1390 H+P S +WGVF RPK ISK +GGG+ + T + E T+ L+ ++ D+ E+ + + I +A ++ + M G AV+ LE V Q CS++ P+G VFLEL MA E GRS +A +Y +L S+ +V+ AKRL G+EAMD++ Sbjct: 5 HQPTKSGSWGVFPRPKSISKTYGGGKRIGVGFTKDPDYDEGLEKTRKALQEYKEKFGIDVASEKEHADEIAEAQEVAAKYMARGIYNKAVTTLERVTQWCSSNSPIGGRVFLELGMAYEACGRSSEAATVYNILAGSRMDDVKKDAKRLLYGMEAMDIM 163
BLAST of mRNA_F-serratus_M_contig1014.238.1 vs. uniprot
Match: A0A7S0UDJ1_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UDJ1_HEMAN) HSP 1 Score: 93.6 bits (231), Expect = 1.420e-16 Identity = 72/221 (32.58%), Postives = 108/221 (48.87%), Query Frame = 2 Query: 860 TGSVGGRWEKPK-EGVGVGTHKPVVSTWGVFERPKDISKAFGGGRDPTLR--KTDPEEARRREEATKALLRSFRGVSDEDLERERANEERIKKALALSKRAMKFGDTFGAVSALEAVKQDCSTHGPLGAVVFLELAMALEVTGRSYQAQDIYKVLRRSKNREVRAQAKRLNEGLEAMDMLNMGRPGEVQEESEISKMWSAKFQQMSGDGEKKYDAVFFEKD 1513 T +GG W + E THKP V TWGV+ERP DI KA+GGGR + K EE T +L +R + D +ER +E+ I +AL L + M+ AV LE V + S LG V+L LA+A E G +A+ Y L + + + +A+ L G EAM+ +N+ +E K + + + +KKYD +++K+ Sbjct: 2 TSGIGGSWTGAQAEAAKDSTHKPKVGTWGVYERPADILKAYGGGRKIGVDGFKPSQEEQDAMSAKTAQMLAEYRAKAGVDRTKERKHEKEINEALELHNQYMRNIALSRAVEVLENVTEYTSYGTLLGGKVYLNLALAYEAQGERQKAKRTYTKLLNNGDNFISTKARELLYGFEAMEFMNVNTTFSKEER----KTMNFRLPDFASYSKKKYDMTYYDKE 218
BLAST of mRNA_F-serratus_M_contig1014.238.1 vs. uniprot
Match: A0A8J2SGP1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGP1_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 8.370e-16 Identity = 72/193 (37.31%), Postives = 102/193 (52.85%), Query Frame = 2 Query: 839 EEASGRLTGSVGGRWEKPKEGVGVGTHKPVVS-TWGVFERPKDISKAFGGGRDPTLRKTDPE----EARRREEATKALLRSFRGVSDEDLERERANEERIKKALALSKRAMKFGDTFGAVSALEAVKQD-CSTHGPLGAVVFLELAMALEVTGRSYQAQDIYKVLRRSKNREVRAQAKRLNEGLEAMDMLNMG 1399 E+A+ + T +GG W P E THKP S +WGVFERP DISKAFGGG+ + + E + RE A + L+ FR + D E I+ A ++ +K GD +GAV ALE + C+ GA LELA+ E G + A+ +Y L S +V+ +AK+L+ G EA D L++G Sbjct: 115 EDAAVKTTSGIGGSWAPPTEQE---THKPTGSGSWGVFERPADISKAFGGGKRIGVGAPEQNNVVNETKARETAER--LKRFREKNQADERVIDRYEGEIRNATRRAQLLVKRGDAYGAVRALEPIATKYCTAKTQRGADALLELALCHEANGDAASAKKVYAALVLSPIADVKRRAKQLSFGFEAADKLSVG 302
BLAST of mRNA_F-serratus_M_contig1014.238.1 vs. uniprot
Match: A0A7S2C0A5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2C0A5_9EUKA) HSP 1 Score: 92.4 bits (228), Expect = 1.010e-15 Identity = 66/187 (35.29%), Postives = 98/187 (52.41%), Query Frame = 2 Query: 842 EASGRLTGSVGGRWEKPKEGVGVGTHKPVVSTWGVFERPKDISKAFGGGRDPTLRKTDP--EEARRREEATKALLRSFRGVSDEDLERERANEERIKKALALSKRAMKFGDTFGAVSALEAVKQDCSTHGPLGAVVFLELAMALEVTGRSYQAQDIYKVLRRSKNREVRAQAKRLNEGLEAMDMLNM 1396 E + T VGG W G HKP VSTWGVFERP DISKA+GGGR + P EE R++ T+A L ++R D+E ERA+++ I ALA +++ M++G AV+ LE V +G LE M + +A+ I+ L RS +++ + A+++ +A D L + Sbjct: 129 ETEKQTTSGVGGSWSGT--GDDGSAHKPKVSTWGVFERPADISKAYGGGRKVGVGGFVPSEEEVARKKAETQAKLEAYRRSIGADVELERAHKDEIIAALAEARQLMRYGAAKAAVTELEKVADYLCVTTEMGCETLLEFGMTRVAANQPEEAKVIFNKLLRSNDKKFKKLARQMLFQEQAQDFLKV 313
BLAST of mRNA_F-serratus_M_contig1014.238.1 vs. uniprot
Match: A0A7S3JUJ7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUJ7_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 8.770e-15 Identity = 66/187 (35.29%), Postives = 99/187 (52.94%), Query Frame = 2 Query: 854 RLTGSVGGRWEKPKEGVGVGTHKPVVSTWGVFERPKDISKAFGGGRDPTLRK----TDPEEARRREEATKALLRSFRGVSDEDLERERANEERIKKALALSKRAMKFGDTFGAVSALEAVKQD-CSTHGPLGAVVFLELAMALEVTGRSYQAQDIYKVLRRSKNREVRAQAKRLNEGLEAMDMLNMG 1399 + T SVGG W P THKP V+TWG F RPKDISKA+GGG+ + + EA ++ T+AL R FR + D AN ++I+ A+ +++ + G+ AV L+ + CS LGA LELA+ E + A+ +Y L S +++ +A +L+ G EA + LN+G Sbjct: 29 KQTSSVGGTWTPPPALDEEETHKPKVATWGRFPRPKDISKAYGGGKRIGVGAINVVNETAEAEKQRATTEALAR-FREKNGADRRLVEANRDKIENAIDTAQKLVLRGNGIDAVKILKPIVDSYCSIKTDLGANAMLELALCYEAVADTESAKLMYGQLVLSPISDIKRRAIQLSFGFEAQEKLNVG 214 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1014.238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1014.238.1 >prot_F-serratus_M_contig1014.238.1 ID=prot_F-serratus_M_contig1014.238.1|Name=mRNA_F-serratus_M_contig1014.238.1|organism=Fucus serratus male|type=polypeptide|length=737bp MGQALQVALLVLALSPGVGAFRCSVAPSLGGGVRKHAINSDRSVPDRRRRback to top mRNA from alignment at F-serratus_M_contig1014:161383..175150- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1014.238.1 ID=mRNA_F-serratus_M_contig1014.238.1|Name=mRNA_F-serratus_M_contig1014.238.1|organism=Fucus serratus male|type=mRNA|length=13768bp|location=Sequence derived from alignment at F-serratus_M_contig1014:161383..175150- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1014:161383..175150- >mRNA_F-serratus_M_contig1014.238.1 ID=mRNA_F-serratus_M_contig1014.238.1|Name=mRNA_F-serratus_M_contig1014.238.1|organism=Fucus serratus male|type=CDS|length=4422bp|location=Sequence derived from alignment at F-serratus_M_contig1014:161383..175150- (Fucus serratus male)back to top |