|
Homology
BLAST of mRNA_F-serratus_M_contig1014.230.1 vs. uniprot
Match: A0A067BK82_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BK82_SAPPC) HSP 1 Score: 273 bits (698), Expect = 9.020e-81 Identity = 153/354 (43.22%), Postives = 215/354 (60.73%), Query Frame = 3
Query: 3 VFNELAGLHQGAVTSIKVEAEAVPEVSERLEIAMVPSFVLMKGTVPCSKLEGADPPTLAKRMQEFAN*RVRSDAPEAGRTDGISAELQHKLQKLTRAAPVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGVATKASREDRLKT-----LVSSNRVMLFMKGNPETPRCGFS 1049
+F +LA LH + +K++AEAVP +S + +A+VP+F+L G ++EG LA+ + + + + + + A L+ +L+KL A+PVMVF+K + EPKC FSRK++E+L+ ++ G+F+IL DE VR GLK++S W TFPQ+YV G+LVGG+D + ++ E G+L QL V+ S +E K L A +LL S A +L MKGTP P+CGFSR + LLR I F +FDIL D VR LK + +WPT+PQLYVRG L+GGLDI+ +M G LA QLGVA K E RL T L+S VM+F+KG+P P+CGFS
Sbjct: 51 LFTQLAALHP-RLAFVKIDAEAVPALSTQFGLAVVPTFILSFGNKVLERIEGMKVAELAQAIDRASKRQAEATPLAMDKPVVVDAALRSRLEKLISASPVMVFMKGNPSEPKCGFSRKLIELLKSENIECGTFDILLDETVRQGLKLFSDWPTFPQVYVNGSLVGGLDILLEMKEEGNLADQLGVKP----------------VSEEEAEKALFASLTELLQS---APVLLFMKGTPAEPKCGFSRKTIELLRANSIPFSTFDILTDDSVRHGLKKMSNWPTYPQLYVRGSLIGGLDILTEMAEEGDLADQLGVAKK---EPRLSTPDYAALISRAPVMIFIKGSPSAPKCGFS 381
BLAST of mRNA_F-serratus_M_contig1014.230.1 vs. uniprot
Match: A0A068TU35_COFCA (Thioredoxin domain-containing protein n=3 Tax=Coffea TaxID=13442 RepID=A0A068TU35_COFCA) HSP 1 Score: 274 bits (701), Expect = 1.030e-80 Identity = 161/369 (43.63%), Postives = 221/369 (59.89%), Query Frame = 3
Query: 51 KVEAEAVPEVSERLEIAMVPSFVLMKGTVPCSKLEGADPPTLAKRMQEFAN*RVRSDAPEAGRTDGISAE---------------------------LQHKLQKLTRAAPVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAA------GGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKASREDRLKTLVSSNRVMLFMKGNPETPRCGFS 1049
+VEAE PE+SE +A VP FV K LEGADP LA ++ + A V +D P A + G++A L+ +L++L + PVM+F+K S +EP+C FSR +V+IL+ + FGSF+IL D+EVR GLK +S W T+PQLY KG L+GG D + + E G+LK L + G + + SS + A GG+ L L +R D L++S + ML MKG PDAPRCGFSR ++ +LR+E IDF+SFDIL D +VRQ LK +W ++PQLY++GEL+GG DIV DM+ SG L+ L G+ + E RLK L++S+ VMLFMKG P+ RCGFS
Sbjct: 58 RVEAEEQPEISEAYSVAAVPYFVFFKDGKSVDTLEGADPSALANKVAKVAG-SVTADEPAAPASLGMAAGPAILETVKDFAKDNSKVESHSPGTGNGLKLRLEQLVNSHPVMLFMKGSPEEPRCGFSRTVVDILKKEKIKFGSFDILTDDEVREGLKKFSNWPTYPQLYCKGELLGGCDIVTAMHESGELKEVL-LDHGTEASDSSKAEATEPGMGKGGISEASGLSADLNSRLDSLINS---SPVMLFMKGEPDAPRCGFSRKVVDILRQEKIDFKSFDILTDDEVRQGLKVYSNWSSYPQLYIKGELIGGSDIVLDMQKSGELSKVLAEKGIPNGITLEVRLKQLITSSPVMLFMKGTPDASRCGFS 421
BLAST of mRNA_F-serratus_M_contig1014.230.1 vs. uniprot
Match: A0A672ZXD0_9TELE (Glutaredoxin 3 n=8 Tax=Percomorphaceae TaxID=1489872 RepID=A0A672ZXD0_9TELE) HSP 1 Score: 268 bits (685), Expect = 1.770e-80 Identity = 144/310 (46.45%), Postives = 196/310 (63.23%), Query Frame = 3
Query: 3 VFNELAGLHQGAVTSIKVEAEAVPEVSERLEIAMVPSFVLMKGTVPCSKLEGADPPTLAKRMQEFAN*RVRSDAPEAGRTDGISAELQHKLQKLTRAAPVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLAS 932
V ELA H G+ T +K+EAEAVPEVSE+ EIA VP+F+ KG+ +L+GA P L K++Q A A E+G +D L +L+KL AAP M+F+K S+QEP+C FSR++VE+L+ + F SF+IL+DEEVR GLK YS W T+PQLYV G LVGG+D + +LAE G+L + C K + +L + + ML MKG + RCGFSR I+ +L + G+D+ +FDIL+D++VRQ LK +WPT+PQLYV+GEL+GGLDIVK++K SG LAS
Sbjct: 43 VMAELAKEH-GSSTFVKLEAEAVPEVSEKYEIASVPTFIFFKGSEKVDRLDGAHAPELTKKVQRLAVAGSPGGAAESGGSD-----LNQRLKKLINAAPCMLFMKGSAQEPRCGFSRQIVELLKKHSIQFSSFDILSDEEVRQGLKTYSNWPTYPQLYVNGELVGGLDIVKELAESGEL---------------------------ENTCPKAMTLEHRLKTIINQHPVMLFMKGNKEGARCGFSRQILEILNDTGVDYNTFDILQDEEVRQGLKTYSNWPTYPQLYVKGELIGGLDIVKELKDSGDLAS 319
BLAST of mRNA_F-serratus_M_contig1014.230.1 vs. uniprot
Match: A0A059CE79_EUCGR (Thioredoxin domain-containing protein n=4 Tax=Myrtoideae TaxID=1699513 RepID=A0A059CE79_EUCGR) HSP 1 Score: 273 bits (699), Expect = 1.810e-80 Identity = 156/381 (40.94%), Postives = 226/381 (59.32%), Query Frame = 3
Query: 3 VFNELAGLHQGAVTSIKVEAEAVPEVSERLEIAMVPSFVLMKGTVPCSKLEGADPPTLAKRMQEFAN*RVRSDAPEAGRTDGISA------------------------ELQHKLQKLTRAAPVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQL-----AVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKASREDRLKTLVSSNRVMLFMKGNPETPRCGFS 1049
VF++LA + ++VEAE PE+SE ++ VP FV K LEGA+P +LA ++ + A + AP A + G++A L+ +LQ+L + PVM+F+K S + PKC FS+ +V+IL+ G+ FG+F+IL+D EVR GLK +S W TFPQLY KG L+GG D + + G+LK + ++ A + T + G+ L L +R + L++S ML MKG PD P+CGFSR ++ +LR+E ++FESFDIL D +VRQ LK +W ++PQLY++GEL+GG DIV +M+ SG L L G+ K + EDR++ L+SS+ VMLFMKGNP+ PRCGFS
Sbjct: 42 VFSQLA-IDFPLANFLRVEAEEQPEISEAYAVSAVPYFVFFKDGKVVDTLEGANPSSLANKVAKVAG-PINPGAPAAPASLGMAAGPAVLETVQEFARGNGSSQVQQQGALEVRLQQLINSQPVMLFMKGSPEAPKCGFSQNVVDILKKEGIKFGTFDILSDAEVREGLKKFSNWPTFPQLYSKGELLGGCDIATAMHDSGELKEVIKDHGISIAASDEATNEKTGSGKAGITESTGLSSALTSRLESLINS---GPVMLFMKGKPDEPKCGFSRKVVEILRQEKVEFESFDILSDDEVRQGLKVHSNWSSYPQLYIKGELIGGSDIVLEMQKSGQLEKVLLEKGIVQKENLEDRIRKLISSSPVMLFMKGNPDAPRCGFS 417
BLAST of mRNA_F-serratus_M_contig1014.230.1 vs. uniprot
Match: A0A6J1CL06_MOMCH (monothiol glutaredoxin-S17 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1CL06_MOMCH) HSP 1 Score: 272 bits (696), Expect = 5.380e-80 Identity = 157/367 (42.78%), Postives = 217/367 (59.13%), Query Frame = 3
Query: 48 IKVEAEAVPEVSERLEIAMVPSFVLMKGTVPCSKLEGADPPTLAKRMQEFAN*RVRSDAPEAGRT-----------------------------DGISAELQHKLQKLTRAAPVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAE-AMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKASREDRLKTLVSSNRVMLFMKGNPETPRCGFS 1049
++VEAE PE+SE +A VP FV +K LEGADP +LA ++ + A+ + + P A + G+S+ LQ ++Q+L ++P+M+F+K S +EP+C FSRK+V+IL+ V FGSF+IL+D E+R GLK +S W TFPQ+Y KG L+GG D + + E G+LK G+ S AA ++ + L A L L N+ ML MKG PD P+CGFS ++A+LREE +DFESFDIL D +VRQ LKD +W ++PQLY++GEL+GG DI M+ SG L L G+ K + EDRLK L +S+ VMLFMKG P+ PRCGFS
Sbjct: 56 LRVEAEEQPEISEAYSVAAVPYFVFIKDGKTVDTLEGADPSSLANKVAK-ASGAINTGEPAAPASLGTAAGAIVLETVRELARDNGSVTESKVQPGLSSALQKQIQQLIDSSPIMLFMKGSPEEPRCGFSRKVVDILKEENVKFGSFDILSDNEIREGLKKFSNWPTFPQIYCKGELLGGCDIVIAMHESGELKEVFRDH-GIGSIASDEVKAAELNRTTGDTSGGLSAALASRLKMLVNSSPVMLFMKGKPDEPKCGFSHKVVAILREENVDFESFDILLDDEVRQGLKDYSNWSSYPQLYIKGELIGGSDIALQMQRSGELKKVLTNKGIIKKETIEDRLKKLTTSSPVMLFMKGTPDAPRCGFS 420
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 325.1 |
Seed ortholog evalue | 3e-86 |
Seed eggNOG ortholog | 2880.D7FQR0 |
Hectar predicted targeting category | other localisation |
GOs | GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006810,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009914,GO:0009926,GO:0009987,GO:0010817,GO:0033554,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0051726,GO:0060918,GO:0065007,GO:0065008,GO:0072593 |
EggNOG free text desc. | protein disulfide oxidoreductase activity |
EggNOG OGs | COG0278@1,KOG0911@2759 |
COG Functional cat. | O |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
Exons | 11 |
Model size | 2096 |
Cds size | 774 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928814.1375873-UTR-F-serratus_M_contig1014:94167..94662 | 1622928814.1375873-UTR-F-serratus_M_contig1014:94167..94662 | Fucus serratus male | UTR | F-serratus_M_contig1014 94168..94662 - |
1690962584.1809995-UTR-F-serratus_M_contig1014:94167..94662 | 1690962584.1809995-UTR-F-serratus_M_contig1014:94167..94662 | Fucus serratus male | UTR | F-serratus_M_contig1014 94168..94662 - |
1622928814.1712072-UTR-F-serratus_M_contig1014:94680..95105 | 1622928814.1712072-UTR-F-serratus_M_contig1014:94680..95105 | Fucus serratus male | UTR | F-serratus_M_contig1014 94681..95105 - |
1690962584.192569-UTR-F-serratus_M_contig1014:94680..95105 | 1690962584.192569-UTR-F-serratus_M_contig1014:94680..95105 | Fucus serratus male | UTR | F-serratus_M_contig1014 94681..95105 - |
1622928814.1909037-UTR-F-serratus_M_contig1014:95417..95517 | 1622928814.1909037-UTR-F-serratus_M_contig1014:95417..95517 | Fucus serratus male | UTR | F-serratus_M_contig1014 95418..95517 - |
1690962584.2001734-UTR-F-serratus_M_contig1014:95417..95517 | 1690962584.2001734-UTR-F-serratus_M_contig1014:95417..95517 | Fucus serratus male | UTR | F-serratus_M_contig1014 95418..95517 - |
1622928814.3442004-UTR-F-serratus_M_contig1014:98169..98182 | 1622928814.3442004-UTR-F-serratus_M_contig1014:98169..98182 | Fucus serratus male | UTR | F-serratus_M_contig1014 98170..98182 - |
1690962584.2782884-UTR-F-serratus_M_contig1014:98169..98182 | 1690962584.2782884-UTR-F-serratus_M_contig1014:98169..98182 | Fucus serratus male | UTR | F-serratus_M_contig1014 98170..98182 - |
1622928814.360216-UTR-F-serratus_M_contig1014:98657..98818 | 1622928814.360216-UTR-F-serratus_M_contig1014:98657..98818 | Fucus serratus male | UTR | F-serratus_M_contig1014 98658..98818 - |
1690962584.2896688-UTR-F-serratus_M_contig1014:98657..98818 | 1690962584.2896688-UTR-F-serratus_M_contig1014:98657..98818 | Fucus serratus male | UTR | F-serratus_M_contig1014 98658..98818 - |
1622928814.3815773-UTR-F-serratus_M_contig1014:99053..99128 | 1622928814.3815773-UTR-F-serratus_M_contig1014:99053..99128 | Fucus serratus male | UTR | F-serratus_M_contig1014 99054..99128 - |
1690962584.3044991-UTR-F-serratus_M_contig1014:99053..99128 | 1690962584.3044991-UTR-F-serratus_M_contig1014:99053..99128 | Fucus serratus male | UTR | F-serratus_M_contig1014 99054..99128 - |
1622928814.4025457-UTR-F-serratus_M_contig1014:99406..99459 | 1622928814.4025457-UTR-F-serratus_M_contig1014:99406..99459 | Fucus serratus male | UTR | F-serratus_M_contig1014 99407..99459 - |
1690962584.3172987-UTR-F-serratus_M_contig1014:99406..99459 | 1690962584.3172987-UTR-F-serratus_M_contig1014:99406..99459 | Fucus serratus male | UTR | F-serratus_M_contig1014 99407..99459 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928814.2469401-CDS-F-serratus_M_contig1014:95517..95640 | 1622928814.2469401-CDS-F-serratus_M_contig1014:95517..95640 | Fucus serratus male | CDS | F-serratus_M_contig1014 95518..95640 - |
1690962584.2077448-CDS-F-serratus_M_contig1014:95517..95640 | 1690962584.2077448-CDS-F-serratus_M_contig1014:95517..95640 | Fucus serratus male | CDS | F-serratus_M_contig1014 95518..95640 - |
1622928814.2617593-CDS-F-serratus_M_contig1014:96085..96181 | 1622928814.2617593-CDS-F-serratus_M_contig1014:96085..96181 | Fucus serratus male | CDS | F-serratus_M_contig1014 96086..96181 - |
1690962584.21583-CDS-F-serratus_M_contig1014:96085..96181 | 1690962584.21583-CDS-F-serratus_M_contig1014:96085..96181 | Fucus serratus male | CDS | F-serratus_M_contig1014 96086..96181 - |
1622928814.2789862-CDS-F-serratus_M_contig1014:96525..96703 | 1622928814.2789862-CDS-F-serratus_M_contig1014:96525..96703 | Fucus serratus male | CDS | F-serratus_M_contig1014 96526..96703 - |
1690962584.223944-CDS-F-serratus_M_contig1014:96525..96703 | 1690962584.223944-CDS-F-serratus_M_contig1014:96525..96703 | Fucus serratus male | CDS | F-serratus_M_contig1014 96526..96703 - |
1622928814.2936594-CDS-F-serratus_M_contig1014:97039..97248 | 1622928814.2936594-CDS-F-serratus_M_contig1014:97039..97248 | Fucus serratus male | CDS | F-serratus_M_contig1014 97040..97248 - |
1690962584.232643-CDS-F-serratus_M_contig1014:97039..97248 | 1690962584.232643-CDS-F-serratus_M_contig1014:97039..97248 | Fucus serratus male | CDS | F-serratus_M_contig1014 97040..97248 - |
1622928814.3108575-CDS-F-serratus_M_contig1014:97584..97681 | 1622928814.3108575-CDS-F-serratus_M_contig1014:97584..97681 | Fucus serratus male | CDS | F-serratus_M_contig1014 97585..97681 - |
1690962584.2456367-CDS-F-serratus_M_contig1014:97584..97681 | 1690962584.2456367-CDS-F-serratus_M_contig1014:97584..97681 | Fucus serratus male | CDS | F-serratus_M_contig1014 97585..97681 - |
1622928814.3288152-CDS-F-serratus_M_contig1014:98098..98169 | 1622928814.3288152-CDS-F-serratus_M_contig1014:98098..98169 | Fucus serratus male | CDS | F-serratus_M_contig1014 98099..98169 - |
1690962584.2672272-CDS-F-serratus_M_contig1014:98098..98169 | 1690962584.2672272-CDS-F-serratus_M_contig1014:98098..98169 | Fucus serratus male | CDS | F-serratus_M_contig1014 98099..98169 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1014.230.1 >prot_F-serratus_M_contig1014.230.1 ID=prot_F-serratus_M_contig1014.230.1|Name=mRNA_F-serratus_M_contig1014.230.1|organism=Fucus serratus male|type=polypeptide|length=258bp
MVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSK WSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAA GGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMA LLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVK DMKSSGSLASQLGVATKASREDRLKTLVSSNRVMLFMKGNPETPRCGFSP IGRRIRR* back to topmRNA from alignment at F-serratus_M_contig1014:94168..99459- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1014.230.1 ID=mRNA_F-serratus_M_contig1014.230.1|Name=mRNA_F-serratus_M_contig1014.230.1|organism=Fucus serratus male|type=mRNA|length=5292bp|location=Sequence derived from alignment at F-serratus_M_contig1014:94168..99459- (Fucus serratus male) AGGTGTTCAACGAATTGGCCGGACTCCACCAAGGGGCTGTCACGTCCATA
AAGGTGGGTACTACACATAGATGTTTGTTGGGCCTGGTGATAGATTCGAT
TGAACAGAACAATACCTGGTAGAGCTTTAGATGGATGATTCCATGAGACA
CTTCTCTTTTAATGGTACCCCCCCCTTTCAGTAACCAATGACTATGACTA
AACGGTGTTATAGAACAGGTTAATTCCATTTCCATGTGGAGGTAATATCG
CACGTACTGTAGCAATAATTTCCTGGCATTTGTTTTTTTGACACTGCCGT
AATGTTGCCGTGTCATAATTCGTTTCTAAAGGTGGAAGCCGAGGCTGTGC
CGGAGGTCAGCGAAAGGTTGGAGATCGCTATGGTGCCGTCCTTTGTCCTC
ATGAAGGTGATCACGATGACATCTCGTACGACACTCTTTGGATATCGTTT
GGCATGGTAAAATCGATAACATGGAGCGCTGGGTAAAGAGTTTGCACTTG
CTCTGACTGTCGATATTTGTATATTACTACTATTAATAGTCTGTTTGGGA
ATGTTTGTGTTTGGATGGTGGTGAGAAGTGATCGTAACTATTAATCGTAA
CTACCAGGTATTATTATTTGTACGTATGTTTCCGTTGGCAGGGAACGGTG
CCGTGCAGCAAGTTGGAAGGGGCTGACCCTCCCACGCTAGCCAAGAGAAT
GCAAGAGTTCGCGAATTAACGTGTCCGCTCCGATGCACCCGAGGCGGGAA
GAACTGACGGAATCTCGGCGGAGTTGCAGCACAAGCTGCAAAAGCTCACT
AGGTGGGAAAATAAATTTGTGTTGCAGGTTTTTGTGGGCGTGGTTCTGCC
ACTATGAGGCCACACATCGCGTCGCTACAAGGAAGTTCGTGGTAATCCAA
ATAGTTGGAATACGGATTTCAATTTCAATGACGATTTGAATATAATATTT
CAGTGAAGTAACTCGTGGCAGGTTATTCGTTAGTCCGACCACATCGAGCT
TCCTTCTTCAAGGATGATTACCATGCCAAAGTTTACGATTCACTTCGGCG
AGTTTCTGGCGTGCCGTTGCGTAACTCAAATTTACCAATCCCGATTCGTG
GCTCTGCTGTCGCTGGTAGTTCATCCGCGCGTGCCACCCGATGCCCGACC
CCGCTTGCCTCAGACCAAACACACAAGAAGAAAGTTCTTCCTCCAAACTA
TAATAAGTACAAGTACTTGGTGTTTTGATAGTTCGAAGATCGAAATGTGA
TTGACGTGCCAAATGATGCTCTATCAGGGCGGCACCGGTGATGGTGTTCA
TCAAGGATTCATCTCAAGAACCCAAGTGCAAGTTCAGTCGGAAGATGGTT
GAAATTCTCCGGTGGGTTCCCGACAGAGGGATTTGACATCCTCCTCAGTC
GGCGTCGTTGAGCTGTAGAATGCTCCTCATATGTTGATATTTTAATGCAT
AGTGAGTGGTGGTAAAGACTCCGAGGCATATCGATGTTGCCCTGATGGAT
AGACGCGCCAAGAGACGAGTTCCACGGTGCCGTGCCCACCCCTGGTCGTG
CGTAAGACGCTCCGCTTCGTCTCCATATAAGAAGTCTTCCTTCTCTTGTT
TCTCATTTCCTCTCCATTTTACAAGTCCTCCTTCTCTTGCTTCTTTCTAG
TTTATCAATTTAGTAATTTAGTAGCAGTGCAGTGTCACGGGTCCTCGTCA
TACGGCGCTACCATTAGCTCACGGTAGATGTAAATAGAGCCGCTGTGTCC
CCGTTTTGCTACGTGTGGTATGTCACAGGGGTGCCGGGGTGGACTTTGGA
TCGTTCAACATCCTCGCGGACGAGGAGGTGCGGGCTGGCCTCAAGATATA
CTCCAAATGGTCTACGTTTCCCCAGGTACAACAAATAACGTTTTAGTATA
GCTGTCAAACGACTCCCAGTATATTCCGTTTGGTGGACTGAATTTTTCGC
AGAGCCAGCCAGCCGGCCCGTCCCACATGCGTCGCGAATCTCATTTTGCT
TCTGTAGACATAGCAGACATAGCAGACATAGCAGACATAGCATGCACAGC
CCCCCTCGGAGATATTATGTTTGCAAGAAGTAATGTACCCGGTAGACACA
TCACCTACTGTACCTTGTGCCGTATTAATAGCATGCCACCCAATCAAATC
AAGTTATATTCACGTAGACTTGTGTGTCTCTTGCGGCTATGGCTGTGTCT
GGGGTGCGCAGCTGTATGTGAAGGGAACACTGGTCGGAGGGGTAGACGAG
ATAGCCAAGCTTGCCGAGGGGGGGGATTTGAAGTCGCAGTTGGCTGTCAG
GGCTGGGGTCGATGATGCGCAATCTTCAACCTCCGCTGCTGCAGGCGGGG
TCAAGTCCCTGCAAGAACTATGCAAGAAACTTGTGGCGAGGTATGATAAA
CTACTTAGCTCTCTCAGAAAGTCGCTGGCTTGGCCCCGTCCGTCTAGGAT
TCAAAATCTCTTGTCAAGTCGTGGCTTTCGAAGAAGGATAGGATAGTCCC
TCGCTCGTTCGATCGTATACGGTAAACAGCTGCAACCGCTATCGCTGTTT
GCTTTTTAATTTACAACTCTTGAAAAGCTCTGAACTCTACTGAAAATACT
TCTACACGTCTTGTTTAGAAAGATGTATCCTCTGTGCTTTCCCCGCAGCA
GTCGCTGTGATGTTGTTCAGCACGTAATAAATTAGCACCCGCTGTTCGTA
TGTATGATATGTACAATGTATACGTTACGTTACGTGTGCGTGGGCTTGGG
TCGCAGCGCGGAAGCGATGTTGATCATGAAGGGCACTCCAGACGCTCCCC
GATGCGGCTTCAGCCGTTCGATCATGGCCTTGTTGCGCGAAGAGGGCATT
GACTTCGAGTCTTTCGATATCTTGGAGGATCAAGACGTGCGGCAGTGTCT
CAAAGACTTATTCGATTGGCCAACCTTTCCTCAGGTGATCAATCATCGTT
GTATTATAATAGTCAGTGATGACTGCCTCTTCAAAGCCGTATGCATAGAC
TGAGGATGATGAAGACAAGATCGCACCTCAAACACGCTAACACGCCTACA
GTACAGTACAGTACAGTACAGTACGCTTAAACCACTGTTTGTTACCAGTA
TGGTACACCCGACGCCAAGTCGTGCTTGTAATCGAAGAGCATGATAGTGT
CAACACCCAAGGAAATTTGTAATCAATCGAAACTACAGTACCTGCCGCAT
GTTTCATGTCTGCTAAGATGTATCGTTTCTTCTTTACGCTCAATGGTTTA
TGTCTCCTGTCCCATGTCCCGCCTGCAGTTGTACGTGAGAGGAGAGCTGA
TGGGAGGATTGGATATCGTGAAGGACATGAAGAGCAGCGGATCTCTTGCA
TCGCAGCTGGGCGTGGCAACCAAGGTGCTGTCTACCTACTGAAATTTGGA
GTCCCAATCCCCCCCCCCCGTCGCATGGATGTTTCGGTCATTAGTATTCG
TATTATTAAGAAGAGTATTTGACACGCTTGATATGGTTGAGATTTTTCCC
TCTATCGGTGACTGAGCCAGCCGTCGGTCCTTTTATCTGGACAAGATTCA
ACAGGTGTCACGTGTAACCCAGGTGGTCATGGGGCAATGGGACAATGACG
CGCGGCTAGACTGTGCTTCTACTCTATATATACGCCGCTTTCACCAACCG
AAGTTGTTATAGATGTAGGCCTTTTTTTGCTATATAACGATTGCGGCTTG
CAATCGCATCGTACGACTCTCCCGAAAATTTTCTTCGAGACATCTGTATT
ATTTCGCATGTCGACGATCAAGCAGTACCATACATTTAATGCCGCCTTCT
GGGTCTCACGCGTGGCCAGGCTAGCAGGGAAGACCGACTCAAGACGCTCG
TTTCTTCTAACAGAGTAATGCTCTTCATGAAGGGAAACCCAGAGACTCCG
CGGTGCGGTTTTTCTCCAATTGGCCGACGTATCCGCAGGTGAGATATTCA
TATTATCCCCCTCCCTATTGACTCCGACTCGTGTGCTACTGTAACTTTGT
TGCCATCGACGCGTTTCCATGTGGTGCTCCCGTGTGCTCGAGGCCTTATT
CCAGTATCGTTACGTCAATGATCCTATGCTCTTTCGATGACGCGTTCATC
ACCAGAAGGGTTCGTTTGCACGACCTATTGTCTGTTTCAGCTCAGCTGTT
GTACTCGGAATTCCCAATGGCAAGAGGATATCAGTGAGGTTTTTCTCGTT
GGAATACTGTGCCAGCGGTATGAATAGTCGTCAAACGGTTAGACGGACGA
GCAGCATCAGAGATGTCAAGTCCCCCCCCCATCTGGGGACGGGTTCGCTG
ATCACCCGCCCACCTCCCCTGCTTCGTCGTTGGCAACATATGGGATAAAT
GTAGCTCTACGCTGGAGGCGAGCTGGTGGGGGGACTTGACATCATGAAGG
AATTGGCGCAGTCGGACGAGCTCAAGGATACTGTTCGGCCGCAGTCTTGA
TCCCTCGGATGCTCTAAGGCCGCCACCTCTGCGTCTCTCTTAACTGTTTG
ACGGTACGATGATGGTCTCAAGGTTATTTGTCCGTCTCTTGATGTGTTTT
GTGTTCCGTGTTTCGTGGGCGTTTCACGATTTGAACATCCTCTATCGGAT
GTTCAGGTGGGCCCTGGCCGTGTTCGCTGCGTCAAGGACAGACGGTATGG
TAGATGTCGAAGATCCGGAGACCAAAAAGACTAATCATCTTTCCAGACCA
GATCGATCTTGAGTTCAATATACACTCTACACTTATTTGAGTTTGATATT
TTTTCTTGCGGTGGACGATCTTGGCGATACATTTTCTAGTATTAATAATA
GTAAACGGGTGAAACTGACAGAGCTGAAATTGTTTTTATGGCGACTTTCA
GGAGTCTTTCCTTGTACACCCTTCGCGACCCATATGAAACATTAACATTA
CATTCGTCTCTTCTATTGGGAAATATGTGTTGTTTGTAATGAAGAAGCGT
ATCCTTCATAGCATCTTTTACCAACTCAACTGAATATAGGGTATCTTTGT
TCCAAGCCATGTCGTGTCTAGTCTAATGGAGTTTGCCTATCTGTACCTAC
AAGATCGCGGTGCACCAGCGTCAATAGACCTCAATAGAGCGTTTTGGTTG
GGTGGGAAGGATATGGAGAGTAAGAGACTGCGCCGTACGACATGCCTAAG
CGCTTCAACTTTGGCGATAAGAGCACTAAATCGCTCGACATCACTGACTG
CTTTGTACCTGGTACTCCCTGGACGGTAAGTCATTGTTGCTGAGCTACTG
CCTCTCCCGAGCGGCCGCTTTTCCCTCCAAGAAACCCGCAAG back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1014:94168..99459- >mRNA_F-serratus_M_contig1014.230.1 ID=mRNA_F-serratus_M_contig1014.230.1|Name=mRNA_F-serratus_M_contig1014.230.1|organism=Fucus serratus male|type=CDS|length=1548bp|location=Sequence derived from alignment at F-serratus_M_contig1014:94168..99459- (Fucus serratus male) ATGGTGTTCATCAAGGATTCATCTCAAGAACCCAAGTGCAAGTTCAGTCG GAAGATGGTTGAAATTCTCCGATGGTGTTCATCAAGGATTCATCTCAAGA ACCCAAGTGCAAGTTCAGTCGGAAGATGGTTGAAATTCTCCGGGGTGCCG GGGTGGACTTTGGATCGTTCAACATCCTCGCGGACGAGGAGGTGCGGGCT GGCCTCAAGATATACTCCAAATGGTCTACGTTTCCCCAGGGGTGCCGGGG TGGACTTTGGATCGTTCAACATCCTCGCGGACGAGGAGGTGCGGGCTGGC CTCAAGATATACTCCAAATGGTCTACGTTTCCCCAGCTGTATGTGAAGGG AACACTGGTCGGAGGGGTAGACGAGATAGCCAAGCTTGCCGAGGGGGGGG ATTTGAAGTCGCAGTTGGCTGTCAGGGCTGGGGTCGATGATGCGCAATCT TCAACCTCCGCTGCTGCAGGCGGGGTCAAGTCCCTGCAAGAACTATGCAA GAAACTTGTGGCGAGGTATGATAAACTACTTAGCTCTCTCAGAAACTGTA TGTGAAGGGAACACTGGTCGGAGGGGTAGACGAGATAGCCAAGCTTGCCG AGGGGGGGGATTTGAAGTCGCAGTTGGCTGTCAGGGCTGGGGTCGATGAT GCGCAATCTTCAACCTCCGCTGCTGCAGGCGGGGTCAAGTCCCTGCAAGA ACTATGCAAGAAACTTGTGGCGAGGTATGATAAACTACTTAGCTCTCTCA GAAACGCGGAAGCGATGTTGATCATGAAGGGCACTCCAGACGCTCCCCGA TGCGGCTTCAGCCGTTCGATCATGGCCTTGTTGCGCGAAGAGGGCATTGA CTTCGAGTCTTTCGATATCTTGGAGGATCAAGACGTGCGGCAGTGTCTCA AAGACTTATTCGATTGGCCAACCTTTCCTCAGCGCGGAAGCGATGTTGAT CATGAAGGGCACTCCAGACGCTCCCCGATGCGGCTTCAGCCGTTCGATCA TGGCCTTGTTGCGCGAAGAGGGCATTGACTTCGAGTCTTTCGATATCTTG GAGGATCAAGACGTGCGGCAGTGTCTCAAAGACTTATTCGATTGGCCAAC CTTTCCTCAGTTGTACGTGAGAGGAGAGCTGATGGGAGGATTGGATATCG TGAAGGACATGAAGAGCAGCGGATCTCTTGCATCGCAGCTGGGCGTGGCA ACCAAGTTGTACGTGAGAGGAGAGCTGATGGGAGGATTGGATATCGTGAA GGACATGAAGAGCAGCGGATCTCTTGCATCGCAGCTGGGCGTGGCAACCA AGGCTAGCAGGGAAGACCGACTCAAGACGCTCGTTTCTTCTAACAGAGTA ATGCTCTTCATGAAGGGAAACCCAGAGACTCCGCGGTGCGGTTTTTCTCC AATTGGCCGACGTATCCGCAGGTGAGCTAGCAGGGAAGACCGACTCAAGA CGCTCGTTTCTTCTAACAGAGTAATGCTCTTCATGAAGGGAAACCCAGAG ACTCCGCGGTGCGGTTTTTCTCCAATTGGCCGACGTATCCGCAGGTGA back to top
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