mRNA_F-serratus_M_contig1014.227.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1014.227.1
Unique NamemRNA_F-serratus_M_contig1014.227.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Match: A0A523E4D4_9BACT (23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A523E4D4_9BACT)

HSP 1 Score: 258 bits (659), Expect = 2.840e-80
Identity = 151/340 (44.41%), Postives = 204/340 (60.00%), Query Frame = 1 
Query:   97 ELLSLGLDEMAEIIGGSGRAKMVWTALAEGIDPFSSQAGSDYLTPKTTEQLNKAVESSGLPWQVVRESVSLCGTRKLLIRLEDGLDVETVIIPCLTGSRSTVCVSSQIGCAKGCQFCMTGKMGFVRNLTAGEILGQVFFARQAVRLHHLPPLSNAVYMGMGEPLDNPVAVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHAATDDVRRLLVPTTSHTMAELRDAFGEVLESRRKEHLFVEVVLIDGVNDSPDQAEALAALLKPLPTRASVNLLPYNDTGHPAFRASSREAVSKFQKILTEHGYVATIRTARGDNESSACGQLA 1116
            ELL+L  +E+AE++GG+GRA+ VW A+ +G DPF     S  +  +   Q      +   P+ V R  +++CGT KL + L     +ETV+IP  +  R+TVCVS+Q GCA+GC FC+T  MG  R LTAGEI+GQV  A   +R  HLP + N V+MGMGEPLDN  AV++S+ +L  P   A+  + +++STVG +P+AIL  R +  +LAWS+HA  D +RR LVPT  H+   LR AF + L S     LFVE+ L+DGVND+   A+ L   L P      VNLLP N  G     AS    V  F++ L + G   TIR  RG    +ACGQLA
Sbjct:    3 ELLALTPEELAELLGGTGRARAVWRAMLQGKDPFEDPGLSRPVRARLRAQ------TFPTPFFVERRDIAVCGTTKLRLVLAGKKRIETVLIP--SKRRTTVCVSTQSGCARGCVFCLTATMGLERGLTAGEIVGQVLLA---MREAHLPAIRNVVFMGMGEPLDNLDAVRKSVAVLCDPSGLALGPTHITLSTVGTTPAAILATRDLPVQLAWSLHAVDDALRRRLVPTMRHSTESLRQAFVDRL-SESGGSLFVEMTLMDGVNDALHHADELIEFLAPFSPSVRVNLLPMN-AGREGLHASPEPRVKAFRQRLRDRGLFCTIRRPRGVEARAACGQLA 329
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BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Match: L1IK87_GUITC (Radical SAM core domain-containing protein n=4 Tax=Geminigeraceae TaxID=589343 RepID=L1IK87_GUITC)

HSP 1 Score: 257 bits (657), Expect = 2.420e-79
Identity = 152/369 (41.19%), Postives = 218/369 (59.08%), Query Frame = 1 
Query:  115 LDEMAEIIGGSGRAKMVWTALAEGIDPFSSQAGSDYLTPKTTEQLNKAVESSGLPWQVVRESVSLCGTRKLLIRLEDGLDVETVIIP--------CLTGSRSTVCVSSQIGCAKGCQFCMTGKMGFVRNLTAGEILGQVFFARQAVRLHHLPPLSNAVYMGMGEPLDNPVAVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHAATDDVRRLLVPTTSHTMAELRDAFGEVLESRRKEHLFVEVVLIDGVNDSPDQAEALAALLKPL--------------------PTRASVNLLPYNDTGHPAFRASSREAVSKFQKILTEHGYVATIRTARGDNESSACGQLATLFKNGR 1137
            L ++ E++GG+G+AK+VW ++  G DP++ +     +T K  ++L +  +       V R S   CGT KLLI ++DG+++E+V+IP         +   R+T+CVSSQ+GC + C FC TGKMGF+R LT+ EIL QV+ A + ++  +LPPL N V+MGMGEPL+N V    + E+LT  + F MA+++V+VS+VGPSP+ I    G+   LAWSVHAA D  R  LVPTT++TM ELRD  GE + S       V V LIDG+NDS +QA+ L  LL PL                      +  V+L+PYND G       + +   +      E G+   +R  RGD++S+ACGQLAT  K+ R
Sbjct:   27 LPDLGELLGGTGKAKLVWASIRAGRDPWTDET----VTEKARKKLKENFQEIPRVSHVTRAS---CGTIKLLIAMQDGMEIESVVIPHEGRPTAASVVEPRTTLCVSSQVGCNRACSFCATGKMGFIRQLTSHEILSQVYIALRCIKEENLPPLHNIVFMGMGEPLNNFV---NACEVLTDQNCFQMAKNRVTVSSVGPSPAVIRAAAGIPAMLAWSVHAADDTTRSKLVPTTANTMVELRDQ-GERMTS-------VAVTLIDGINDSVEQADQLMKLLTPLLEQGPALMPAESLLRFHVLAGLKVCVDLIPYNDIGTEDCTPPA-DVHLQVPAAHHERGFACFVRVTRGDDQSAACGQLATSSKSSR 376
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BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Match: A0A7S4RUD1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RUD1_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.910e-77
Identity = 168/409 (41.08%), Postives = 236/409 (57.70%), Query Frame = 1 
Query:   82 SISSDELLSLG-----LDEMAEIIGGSGRAKMVWTALAEGIDP--FSSQAGSDYLTPKTTEQLNKAVES-------------------------------------SGLPWQVVRESVSLCGTRKLLIRLE-DGLDVETVIIPCLTGSRSTVCVSSQIGCAKGCQFCMTGKMGFVRNLTAGEILGQVFFARQAVRL-------HHLPP-LSNAVYMGMGEPLDNPVAVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHAATDDVRRLLVPTTSHTMAELRDAFGEVLESRRK--EHLFVEVVLIDGVNDSPDQAEALAALLKPL------PT-RASVNLLPYNDTGHPA-FRASSREAVSKFQKILTEHGYVATIRTARGDNESSACGQLAT 1119
            S SS++ ++LG     + E+ + +GG GRA++VW     GIDP  F S   S    P TT  L+K + S                                      G    +   S S  GT K+LI LE DGL+VE+VIIP      ST+CVSSQ+GC +GC FC TGKMG  R+LT  EIL QVF+A++  RL         LPP +SN V+MGMGEP DN  AV R++ +LT    F+ AR ++++STV PSP + LR++ +   LAWS+HAA D  RR LVPT ++++ EL++A  EVL+ R K  +++ +EV L++ VNDSP+ A  +A + + +      PT +  VNL+PYNDTG    +   S+E V ++Q++L + G  A +R  RGD+ES+ACGQLAT
Sbjct:   56 SSSSEKEITLGAISSTIPELTKSLGGKGRAQLVWDCYKIGIDPALFFSSTNSPPPLP-TTPLLSKFISSFETHQDILNLLPTSRQTQTLGKTALDALANTYNGTVLEGGVASLSHLSTSEDGTVKMLITLEQDGLEVESVIIPWFERGWSTLCVSSQVGCRQGCTFCATGKMGLKRSLTTNEILAQVFYAKKITRLFSSSSSNQKLPPDISNIVFMGMGEPTDNLSAVTRAISILTDETLFSFARQQITLSTVAPSPQSFLRLKEVPAVLAWSIHAANDVKRRQLVPTATYSVQELKEALIEVLKGRCKNLQNVMLEVALLNHVNDSPEDALEMANVAQDIIKAVDNPTMKLMVNLIPYNDTGGGIKYTKPSKERVLQYQEVLWKRGIYAHVRETRGDDESAACGQLAT 463
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BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Match: B7FTW5_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FTW5_PHATC)

HSP 1 Score: 249 bits (636), Expect = 2.730e-77
Identity = 141/292 (48.29%), Postives = 190/292 (65.07%), Query Frame = 1 
Query:  289 VRESVSLCGTRKLLIRLEDGLDVETVIIPCLTGSRSTVCVSSQIGCAKGCQFCMTGKMGFVRNLTAGEILGQVFFARQAVRLHHLPPLSNAVYMGMGEPLDNPVAVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHAATDDVRRLLVPTTSHTMAELRDAFGEVL--ESRRKEHLFVEVVLIDGVNDSPDQAEALA----ALLKPLP-TRASVNLLPYNDTGH---PA--FRASSREAVSKFQKILTEHGYVATIRTARGDNESSACGQLATLFK 1128
            V ESV+  GT KLL++L DGL VETVIIP     RST+CVSSQ+GC + C FC+TG+MG +R+L+A EIL QV  A++A R +++ P+ N V+MGMGEP DN  AV R+  +LTH   F +   ++++STV PSP A L++      LAWSVHA+ + VRR LVPTT +TM ELR+ + + L   SR      +EV L+D +NDS + AE LA     LLK +P  +  VNL+P+ND      PA  +R  + E + +FQK L   G +  +RT RGD+E +ACGQLAT  K
Sbjct:    1 VHESVAADGTTKLLLQLVDGLQVETVIIPWDERQRSTLCVSSQVGCRQACTFCLTGRMGILRSLSADEILVQVLLAKRACRENNIYPIDNIVFMGMGEPADNTDAVVRAANVLTHQQQFQLTPRRITISTVAPSPDAFLKLGKAPVALAWSVHASREAVRRELVPTTKYTMEELREGYIKALLDRSRSMRTTMLEVTLLDKINDSLEDAEHLADFCQPLLKSVPGIKLVVNLIPWNDISASFGPASVYRKPTTERIGEFQKALIGRGILCYVRTTRGDDEGAACGQLATTNK 292
[Close]
BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Match: A0A448Z5E9_9STRA (Radical SAM core domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z5E9_9STRA)

HSP 1 Score: 254 bits (648), Expect = 3.600e-76
Identity = 158/411 (38.44%), Postives = 222/411 (54.01%), Query Frame = 1 
Query:  100 LLSLGLDEMAEIIGGSGRAKMVWTALAEGIDPF-------------SSQAGSDYL---TPKTTEQLNKAVESSGLPWQVVRE-----------------------SVSLCGTRKLLIRL-EDGLDVETVIIPCLTGSRSTVCVSSQIGCAKGCQFCMTGKMGFVRNLTAGEILGQVFFARQAVRLHHLP----------------PLSNAVYMGMGEPLDNPVAVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHAATDDVRRLLVPTTSHTMAELRDAFGEVLESRRKE--HLFVEVVLIDGVNDSPDQAEALAALLKPL---PT-----RASVNLLPYNDTGH---PA--FRASSREAVSKFQKILTEHGYVATIRTARGDNESSACGQLAT 1119
            LLS   +E+ +++GGSG+AK  W  L  GIDP              + + GSD L   T    E+   A  + G P ++ +                        SVS  GT KLL++L  DGL+VETVIIP     +ST+CVSSQ+GC +GC FC TG+MG +RNL+  EI  Q+++A +  RL  LP                P+ N V+MGMGEP DN  +V ++  ++   + F +A  K+++STV PSP     +      LAWSVH + D++RR LVPTT H+M ELRD   +VL  R K   +  +EV L+DG+NDS + A  LA   +P    PT     + +VNL+P+ND      PA  +R    E +  +QKIL E+G +  +RT RGD E++ACG L+T
Sbjct:  113 LLSYSFEELTDLLGGSGKAKACWDCLRMGIDPIWYYGNQRDDDESNTERTGSDLLKGWTRGMVEERLAATSTRGTPTKLGKSTLDLLEQIGGSKVEEDVCKLSQVSVSPDGTTKLLLQLASDGLEVETVIIPWEDRGKSTLCVSSQVGCRQGCTFCSTGRMGKLRNLSTAEIAAQMYWANKVYRLSSLPENQEQSTSNNNSKKLYPIDNCVFMGMGEPADNAPSVVKTASMMADNNLFQLAPRKITISTVAPSPEVFRELAEAPAVLAWSVHCSRDEIRRQLVPTTRHSMEELRDGLMDVLRGRTKRLRNTMLEVTLLDGINDSEEDARHLADFCRPFFEGPTAIRGIKLTVNLIPWNDISASFGPASGYRPPKPERIRAYQKILGENGILCYVRTTRGDEENAACGMLST 523
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A523E4D4_9BACT2.840e-8044.4123S rRNA (Adenine(2503)-C(2))-methyltransferase Rl... [more]
L1IK87_GUITC2.420e-7941.19Radical SAM core domain-containing protein n=4 Tax... [more]
A0A7S4RUD1_9STRA1.910e-7741.08Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B7FTW5_PHATC2.730e-7748.29Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A448Z5E9_9STRA3.600e-7638.44Radical SAM core domain-containing protein n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1014contigF-serratus_M_contig1014:25005..34905 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score524.6
Seed ortholog evalue3.8e-146
Seed eggNOG ortholog2880.D7FQQ6
KEGG koko:K06941
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Radical SAM superfamily
EggNOG OGs2QV91@2759,COG0820@1
EC2.1.1.192
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Exons6
Model size1137
Cds size1137
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1014.227.1prot_F-serratus_M_contig1014.227.1Fucus serratus malepolypeptideF-serratus_M_contig1014 25005..34905 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928813.6075191-CDS-F-serratus_M_contig1014:25004..250621622928813.6075191-CDS-F-serratus_M_contig1014:25004..25062Fucus serratus maleCDSF-serratus_M_contig1014 25005..25062 -
1690962583.868055-CDS-F-serratus_M_contig1014:25004..250621690962583.868055-CDS-F-serratus_M_contig1014:25004..25062Fucus serratus maleCDSF-serratus_M_contig1014 25005..25062 -
1622928813.649177-CDS-F-serratus_M_contig1014:25321..255881622928813.649177-CDS-F-serratus_M_contig1014:25321..25588Fucus serratus maleCDSF-serratus_M_contig1014 25322..25588 -
1690962583.8794873-CDS-F-serratus_M_contig1014:25321..255881690962583.8794873-CDS-F-serratus_M_contig1014:25321..25588Fucus serratus maleCDSF-serratus_M_contig1014 25322..25588 -
1622928813.6675348-CDS-F-serratus_M_contig1014:25880..261491622928813.6675348-CDS-F-serratus_M_contig1014:25880..26149Fucus serratus maleCDSF-serratus_M_contig1014 25881..26149 -
1690962583.8932643-CDS-F-serratus_M_contig1014:25880..261491690962583.8932643-CDS-F-serratus_M_contig1014:25880..26149Fucus serratus maleCDSF-serratus_M_contig1014 25881..26149 -
1622928813.6882813-CDS-F-serratus_M_contig1014:26463..266141622928813.6882813-CDS-F-serratus_M_contig1014:26463..26614Fucus serratus maleCDSF-serratus_M_contig1014 26464..26614 -
1690962583.9058552-CDS-F-serratus_M_contig1014:26463..266141690962583.9058552-CDS-F-serratus_M_contig1014:26463..26614Fucus serratus maleCDSF-serratus_M_contig1014 26464..26614 -
1622928813.701144-CDS-F-serratus_M_contig1014:27162..272691622928813.701144-CDS-F-serratus_M_contig1014:27162..27269Fucus serratus maleCDSF-serratus_M_contig1014 27163..27269 -
1690962583.9147196-CDS-F-serratus_M_contig1014:27162..272691690962583.9147196-CDS-F-serratus_M_contig1014:27162..27269Fucus serratus maleCDSF-serratus_M_contig1014 27163..27269 -
1622928813.7194002-CDS-F-serratus_M_contig1014:34620..349051622928813.7194002-CDS-F-serratus_M_contig1014:34620..34905Fucus serratus maleCDSF-serratus_M_contig1014 34621..34905 -
1690962583.923642-CDS-F-serratus_M_contig1014:34620..349051690962583.923642-CDS-F-serratus_M_contig1014:34620..34905Fucus serratus maleCDSF-serratus_M_contig1014 34621..34905 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1014.227.1

>prot_F-serratus_M_contig1014.227.1 ID=prot_F-serratus_M_contig1014.227.1|Name=mRNA_F-serratus_M_contig1014.227.1|organism=Fucus serratus male|type=polypeptide|length=379bp
MRGSKASPPSSFNSIPAESSNPRCRSPSISSDELLSLGLDEMAEIIGGSG
RAKMVWTALAEGIDPFSSQAGSDYLTPKTTEQLNKAVESSGLPWQVVRES
VSLCGTRKLLIRLEDGLDVETVIIPCLTGSRSTVCVSSQIGCAKGCQFCM
TGKMGFVRNLTAGEILGQVFFARQAVRLHHLPPLSNAVYMGMGEPLDNPV
AVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHA
ATDDVRRLLVPTTSHTMAELRDAFGEVLESRRKEHLFVEVVLIDGVNDSP
DQAEALAALLKPLPTRASVNLLPYNDTGHPAFRASSREAVSKFQKILTEH
GYVATIRTARGDNESSACGQLATLFKNGR
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mRNA from alignment at F-serratus_M_contig1014:25005..34905-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1014.227.1 ID=mRNA_F-serratus_M_contig1014.227.1|Name=mRNA_F-serratus_M_contig1014.227.1|organism=Fucus serratus male|type=mRNA|length=9901bp|location=Sequence derived from alignment at F-serratus_M_contig1014:25005..34905- (Fucus serratus male)
ATGCGAGGGTCGAAAGCGTCCCCGCCAAGTAGCTTCAACAGCATCCCGGC
GGAATCATCCAATCCTCGGTGCCGATCACCTTCAATTTCGAGCGACGAAC
TGCTATCTTTAGGCCTAGACGAGATGGCAGAGATAATTGGAGGCTCTGGC
CGGGCGAAGATGGTTTGGACTGCTCTGGCTGAGGGTATTGACCCATTTTC
GAGTCAGGCAGGCTCCGACTACCTTACCCCCAAAACCACGGAGCAGTTGA
ACAAGGCTGTCGAATCCAGTGGTCTACCGTGGCAGGTGCGCTTGCTTCTG
CTTTCGCTCCAGCCATCGCCCTGTCTAAATGAGTTAGCCGGTATTACAGT
ATTCGAAATTTGAACCTATCTCCATGAATTCGGATTTTTTCATGTGCTTT
CTTCTCGTTATATATATCACGTCTGCTATTATGTCTACAGCGTTGTTTTG
TTACACAGTTTTCAGTTTTCAATATTTCACACACATCCAAGGCAACGCAA
TCCTCCCCGCTGCATCTTCCGAGCATCCACACCGCACTGTTTTGTTTTGT
CTGAGAGACAGAGACAGAGAATGAGATTGGAATCTTGGGTGGGTAGTAGA
CTGATGACTGTTCAAAGAAAAATATGAACGCATTTAGACCTCCTGAATAT
CCCGCAGTCAGCGGGGAAAAATGTCAAAACTTTTAGGTAGGATCATAGGC
TGTAAAGACATTTAATCGGATTCCCCAATGGTAGTAACATAGGGTCAACA
GAACAATGTCGGGGAGAGACGCTACGTTAATTGCATCAACCGCCATGCAG
GGACACCATACAAAAAAAGAACCAAAGACACGATAAGCCTGAATTACAAC
TCAATTTGTAACATTTATGAAGGGTCTAGGATCGGATGGGTATCGATGAC
AGGATGAAGGAAATATACTACGGTATCAATATTAATTTCACACTCTTGCT
ATATGTGATGACCGTACATACAGTCGTGCCGGGTTGTAATATTAATAGTT
TGTGGGCTTAATTGTGTTTAAAGAAAATCAGAACAGCACCTAGACCTTTT
GAGCATCCCCCGGTTAGAGGGGAAAAAATGTTATTCATCATTACCCTCTA
GCCATCCTAGGACGTGGAGAAGGACACTGTTTATGGTTCAGGGCTAACCA
TAGCGGACAACGGCGGACAGGGAACCGCACAGATCCACAACAGTGTTAGT
TGGCATCTAAAACATTGGACTACTGAGTCACGTGACTAGTAGTCTAATGG
TTAAACGCTTCTAACTTACAAAAGATATGTCTTGGGCTCTCTGGCGTCTT
TTTCCGGTAGCGACAGTGATCTCCGAGGTCCTCCCCTCGCCACGCACTGC
CGTATCTCAATGGCCGCAACTATAATAACATTTTTCTACTTTTTCGTTTT
GTCGCTACCGGGATTGAACCCGCGACGTATAATTTGTATTTGTTGGCATG
TAAACCATTGGACTACTCGAGTCACGTGACTCAGTAGTCCAATGGTTTAC
ATGCTAACAAACACACAATATAGTCGCGGGTTCAATCCCCGGTAGCGACA
AGAATGAAAAAATGGAAAAAATGTTAGTTGCGGCCATTGAGATACTGCAG
TGCGTGGCGAGGGCAGGACCTCGGAGATCACTGTCGCTTCCGGAAAAAGA
GGCCAGAGAGCCCAAGACATATATTTTGTAAACCATTGGTCGACGAGGGA
AAGCAATGGCTGAATCCTTCTCGCGAGAAAAATAAAGGCACGCACCGCAG
AAAGAAGGTGGATGAGAAATCCTATGTGACCTTCCTCCTGTGTGACCCCG
GCTGGTACGTCCAACGAACTTGATGTCCAGAATGAATGGGAAGAAAACAC
ACAAGACACACACTCAGTCACGTGACTGAGCAATCTAATGGTTAAACGCT
TCTAACTTACACACAGATTAGTATAATGTGGTGTGGAATCTGGCATAACA
CCCAAACACTGGGTGCGGAGAGCGCCATGTTGACGTCGTTTTCCTGGCAA
CTTTAGGGTACGATACCGCAAAATCATGTTCAACCTCATGGGTCCAGCCG
TACCACCACCGCCTTGTCCCGTACAAATCCTTCGTCGGAGGATAGCAACA
CTACAGATAGTGTGGTTTTCGGTGTTCTAGCTGTATGTCGAATCGACAGT
CCAATGTAGGTGTACCAGGGTCTAATATCGGTGATCAAAGTCAGGCGTGC
GAAACGAGGCCGTGCTTGTTTTTGTAACCTTGCATTGGAGTCAACAGCTG
TACTGATATACATGGTAAAATATAGTACACACTACGGTACTGTAGTGTTT
TGTATCACTTTTAAAAATCAGTGAGCTGTACATCATTTCCAAGTCACACG
GTACGGTTGTACTAAAAGCAGACTATCACTGCTCATGTACTACAGCAGAC
TATATACTACTATCATACTTCTGTATCGACACTCCGACCATCTGCGATGA
AAGCTACGGCAGACCCAAGTATGGTTTATACAACAGTGCTTCTCAAGTTG
TAACCTTGCATTGGAGTAGCTGTGCTAATATAAATATTGAATATTGTACA
TACCGTGTTGTTTTGTATCACTTTTTACAATCATCGAGCTGTGCAACGGT
ACTTTCAACATGCCCACTCCATACCAATAGTGCGTGTGGGAAATATATAT
TAATTGGTCCATGGTGACCTGCCAAGGCAGGACCCGTTAGGAACTACCTT
GAGGTTTACTGACCCTGTGCCGGCGCACTCTCGGCAGTGAACGCCGTCGG
TACGCAAGTACGTGACCCGATAAACTCGGGACTGACCCGATGGCGTATGA
CGGTTTAATATATAAACGAACGCCCCCCGGAACTTGGGAGGAATCCCGTA
AGTCAGCACCAGATTCAATTCAGCCTGAGTATGGAGATGGGCAGACTGAC
GCGGGACGGGGCTGCCGAACCTGTTTCGCGAGACCAAATTCTCAGGCGCG
AACGGGGACAGAGAAATATCGATTTTCCCTGTTCAGCTGACCACTAGCAG
GAGTGGAAACCTTACCCGGTTGATCCATACTCTTGCTGTATGTGTGACCA
TACATGTGTGACCATACATCATTTCTAAGTCGCACGGTAGGGCTGTACGA
AAAGCAGACTATCACTGCCCATGTACTACAGCAGACTATGTATGTGTGTA
TGTATGGTCACACATGTAGCAAGAGTATGGATCAACCAGGTAGGGTTGCC
AATCCTGGTCGTGGTCAGCTGAACAGGGAAAATATCTGCTACTGCTGCTG
TATCGACGCTTCGACCATCTGCGATGAAAGCTATTGCAGAACGAAGTATG
GTTTATACACCAGTGCTTCTGGAGATGTAACACTGTAAGTACAAGCTATG
GTTTCCTGGTACGGAGGCCAGAATAAAATACCTGGTTTTGTATGCACTAT
GCACTATACACTATTAGCAGTGATCTGAGAGGATACCAGTACTTGACTCG
GGCGACAAGCACCATGATGATGTCAAGTCTCTTTTAAAGTAGTTAACAGC
AACACTTGAAGGGTAGGTAGCAATGTCATGATACCAAATACTCTTGGAAT
CGACATGGCAATCATATCATCTCACTGTCCGAGTCCTTTCGTATACACCC
GCACCCCTTCACCCATTCATACCAAGGCTACCTTCTGCCGTGTTGCATTA
GATCAAATCGCCCAGGGTCTAATCTTAGTCGCTTAAGTCAGGGTATCTGA
GCTGTTCCTCCCTGTACACACACCAGCTCGATTTGCTACAAAAAATAATA
ATTTCAGTGTGGTGCTCGCCATCTATGGGTTGGTTCTCTTAACGCGGGAC
TTCGCCGGAGATGATGGTGAGATGCGTCTTTGGTGGCATGTACCCTTGAT
CTGGTCTTCCGCGACACTCACAGGATATATGCCCTGGGGTGTCCCAGCCC
GTGCTAACTCGGGTCCCCTAATACCCTAGATCTGGTCTTCGGCGACACTC
ACAGGATATATGCACTGGGGTGTCCCAGCCCGTGCTAACTCGGGTCCCCT
AATCCCGCCGCGCTTTTAAAATCGACGTTCTTTGGCCTTGGCCAGTTTTA
TTAATATCGTGGGACAGAACTGGTCTGCAAACGCAAGACTTCGCACACCT
CTGCAACGAACAGTGATACAGCGGGGCCTACCTCCGAGGTAATCACAGCT
ATCCCAGACAGCGTGAATCAGCGGAATAAGTCAGTGATTTCTACGTGATA
AAGAGGCGTTTATAGGCAACACTGTAGAATGGTACACACTTACCTACAAG
GTAGCAGTTATGGTGTAGAAATGAAGTAAAAATGAACTGTAACCGGTCGC
CCCGGTGGTTCAGTTGGTGACCTCGAAACCTTCTTTCATTTGGACATGAG
TTCGAAGTTCGAATCTCGGTGCATTCACACGAACTGTGATTTTTCCTCAC
AAAAAAAAGAGCCCAACAAGTCGAGAACGATTACTTCGTGGGTATAAAAG
GTTCGACTTCACGATGGACGAGGGAAAGGGAAGGCTGAAGCCTTCTCGCG
ATAAAAAGTAAGGCAAGTACCGCAGAAGGAAGAAGGTGGAGAAAGCCTGT
ATGACGTTCCTTCTGTGTGACCTCGGCCACAAATCTGACGTCCAGAATAA
ATAGGATGACAACACACACACACACACACACACACACACACACACACACA
TAGAATGACTAGGATGACAGGGCCGGATTGCGTGGTTATGTGCAATTTAA
TAAATACACACACACACACACAGTATCATTGATCCCCCCTCGGGAGGATC
AATGCGAGTGGCATAGAATGACTAGGATGACAGGGCCGGATTGCGTGGTT
ATGTGCAATTTAATAAATATACACACACACACACACACACTACGTCTGAT
CAGAGGTTTTCGTAATATGTATCATTGATCCCCCCTCGGGAGGATCATTG
CGAGTGGAATAGAATGGCTAGGATGACAGGGCCGGATTGCGTGGTTATGT
GCAATTTAATAAATACACACACACACACACTTTTCGTAATAAGTATCATT
GATCCCCCTCGGGAGGATCAATGCGAGTGGCATAGAATGACTAGGATGAC
AGGGCCGGATTGCGTGGTTATGTGCAATTTAATAAATACACACACACACA
CACACACACAACAATATTGGGACTAGGACCGGATGGGCGTCGATGCAGGG
AATCTAGTCATGATGTAGAACGGTACATACTTATAAACGTAGCTGTTGTG
GTGTCAAAATTAAGTTTAGTAGAGGAAAAACTCCACCTGAGATTTAGTAC
AGTTCTTCAATGATAGTCTCATGGGGTTCACTGTGTAATACTGGAACTAC
CTTGAGGATTACTGGCCCTGTGCTGGCGGACTCGCGGCGGTGAACGCCAT
CGGTACGCAATTGCGTGACCCGATAAACTCGGAAATAAACGGACACCACC
GCGGAGATCGGGAGGAATCCTCCAAGTAAGCACCAGATTCAGCCTGAGTA
TGGAGATGAGCAGGCTGACGCGGGACGGGACGGCTGAACCCGTCTCGCGA
GACCAAATTCTCAGGCACGCACGGGGAGACAAGGAAATATTATTTTCCCT
GTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTTGATCCATAC
TCTGCTATATGTGATGGCTATACATACATACATACATACATATATACATA
CATACATACCTCGGGAACCTGACTTTTTGTTTCCCAAAGCGAATCAAGAG
GGTTGCGTGAGTATCGCGGAAGTTGTGCTGGCCACTCGACACTTTTTCCA
GCTTCGTCTCTCAGAAAAGTTGAAGGAAAAGATGGAAACCTTTATGCGGT
GTAAGGGGTGGGAGCTGATCAGGACGCCGCCGTACATGCCATCGTTTCAG
CCGATCGAGCTGTTCTGGGCGCATGGCAAGCGGTATGTCAGTCTCAACTT
TTGGTTGAAGTGTAATATGTCGGAAGTCTGGGAACAGCTCCGAAAGGGCT
TCTACGGGGACTCGGAGTGGAAGGGACAAGAAGTGGGTTGGAAGCCGGCA
AATTGTGCCAACTTGGTGTGCTACGCCATCGGCAAAATGAATGCTTGGAT
AGAGAAGTACGGCGGTGGGAAACTGACTGGTATAGTAGGGAACTTTGCGG
TTGCCGATTTCGATAAGGACGAAGGTCCAGTCAGCTTGGGTGATGAAAGG
GACTTGAGGAGGAAATGGCAAACGATTGACAGGAAGAGGAGGTTGATAGT
TGATAATGAATGATAATGATGAAACTGAGCCGTGAATTAACCAGAGTTAT
CGAGCCGTGAAATGGGTTGGCAGCGTCATTGCCTATTTGAATCGTCAGGC
GCGCGGAGAGTATTCCGATATAAAGCAGAGCCTATGATGAGGAATAAGTG
TCGAGTATCTCCAGACAGGACTTCTTCGGGCGATATTCGCGACTGCTGTA
TAATTTGATCCCAAGTACGCGCGCTTGATGTTGGGTCTAGTGTACTGTAC
CAAGAAAATGCCTATTAATAATTTATAGCTTTTCTGTTTGCGCTGTACGC
ACGAACCACGTCTGAACAGCTTACATGACACGTCGTCAAAATATCTGTTT
GAAAAAATAGAACATGTGTTCTGTGGCTTGTAATTCAGATTCTGAACTAC
TGGGAGCATTCCAACAGTCGAATTTCTATATTGGTCCGTACCCAAAGATA
TCGTCTTGACGCGGATAAGTTTCCGATGTCCTCGGGTGGTTGGAGGGTGC
AAAGATTTTGTCGTGATTTGGATCCCTCTTGGTTTGAGTAGCAGGTTGTC
ACCATGATGTGGCCCGTTGACCTTCGTACATCTTGATAACCATGGGCAGG
ATCGGCCTTTGATAGTAATAGGTCTATGGCCGACTCATTGTATTAATATT
AATAGTTTATTTTGTCGGAGGACAATGCGCTACATATGCGATTCAGTCAA
TCAACCATCAACCAAAATACACCATTAATAACGCCCAAATTCTGGAGAAA
GGTATTTGCTTTAAAAAATATATGTGTGCTGTGATTGGTCTATTTAGGCG
GGAGTTTCGTAATTTGTCTGTACCCTCTGGGGTAAGTGACTTCAAAGCCT
CAAGATACCAGGTATTCTATTGGTATTTGCGGAGGCTCTTTTCTACGGTC
AAGTTAAATCAGCACCTGGCGTGTAACTAAGTACGGTAGATATATATATA
TTATCACGGTCGTCTTTATCGTGAAACATTTTTCCGGGGCAAAATTCAGG
CAAAAAAGTGGAGGAAGATTTTCTGCATTAGAACTTAGAGGATTCCTCCC
GATCTGCGCGGCGGTGTCCATTTATTTATTTCAACCGCCAAACGCCATAG
GGCCAGTCCCGAGTTTATCGGGTCACGCAATTGCGTACCGATGGCGTTCA
CCGCCGTGAGCCCGCCGGCACAGGGCCAGCAGTCATAGTCATAGTCATAG
TCATAGTCATAGTCCTCAAGGTATGTAGTTCCAGTAATGGGTGCTGCCTT
ACCTATAGCAGATATCACCATGGACTATGACCAATTAATGTGCGCCTCTC
TTTTCCACCCCCACTACTTGTATTCGTACGAAGTGGGCATGTCGAAACTA
TCGGAAGCTATTGTATTAAGTATTAAGCAATGTCCCCTTCGATTGTAATT
CCTCATTGCCCACGTGTGTATTGCACCGTTGTCTAGGTTGTGCGCGAATC
GGTTTCCTTGTGCGGGACGCGGAAGCTTCTCATCCGATTGGAAGACGGAC
TCGATGTGGAAACCGTCATCATTCCGTGTCTAACCGGCTCAAGGTTCGTC
GCTTTTCGTTACATACCTTTTTTGTGTCTCTTTTTCTTCCTTGTGGAGGT
ATAAGTGTAGTATAAGTGTAAGTGTAAAAAGGAAATAAAATAACCTGGCT
TCCGGCGATCCCTAATTTGATCCTAATTTGATCCCAATTTGATCTAGTTT
CTGTACATAGTAGCCCAACTAATAGTGTTCGAGCTTCTTTAATTGAAAAA
AAATGGGCCGTTCCCGCTACTCGCCATTGCATATTTAATACTCCGTACAA
TTTAATATTTTATCTGTGTTTATATGTATATATATATATATATGTATGTA
CCATCTTCTCCCGGACAGTTCATATTTTTGCTTCCTTTTTACATAAGATA
TTCAACCTTTGGGCCACCGACTATTAATTATGTATCTGATAAAGTCTCTA
CCAGGTTTTTGAACTGTGGATAGATAGCCTCTGGTCAACACGATGTCGAA
AAGCGCCGCTCGAATTGATTTGAACCTCTTTTTTCACTGTTATATAGTAT
TATAAGTTCCAACTGCCTGCATCTCTCTCGGAACACCCCAGATCCACTGT
GTGCGTGTCAAGCCAAATAGGATGTGCAAAAGGTTGCCAATTCTGTATGA
CCGGAAAGATGGGATTCGTCAGAAACCTTACTGCCGGGGAAATCTTGGGC
CAAGTGTTCTTTGCTCGCCAAGCGGTCAGGCTACACCACCTGGTGAGAGA
TCAGGCTGTTTTTATCCCTTGTTTGACCACCGAAATATACCTAGGTAGGA
CAAGGGAAATTACAAAGGCGGTACCTGGCTATAGTGGGCTTGTCATGATG
GTAGCACGCCACATGATAAGCCGCGTATTTTTCACATGTACCGTTGCTGA
TAGTTTCAGGAAGATGTAACTGGGTCTCTACGGAGATTCAATCTATTATT
ATTTATAGGAGCAGTTCACCTCAAAAAACGTAAACACTCACTGTACTGTA
CTGTACCTGGTAATATACTGTACTGTACGTGTGACCGACAACTACTGCTG
TTGCAGCCTCCTCTTTCCAACGCGGTGTACATGGGGATGGGAGAGCCGCT
CGACAACCCAGTAGCGGTGAAGCGGTCGTTGGAGCTCTTGACTCATCCGC
ACGCTTTCGCCATGGCAAGGAGCAAGGTCTCTGTGTCCACCGTCGGCCCG
TCACCAAGCGCGATTCTTCGGATGAGGGGGATGGCCTGTCGCCTGGCGTG
GTCAGTGCACGCAGCCACGGACGATGTTCGGCGGTTGCTCGTACCAACTA
CCTCGCACACAATGGCGGAGCTGAGGTCAGACCATTTGAACATATTTGTA
TCATGACATTCCTGCCATACGGGCTTTGCTTCCAGCTGCAGAGCCGCCGC
AGCTCGCGCGCCTTGTCGTCGAGCGCTCACCAAGATTCATGATGATGAAA
TGGTGTACCGTATCGCAAAGCGTGCAAACCTGGACATAGAATGATATGTC
CCTCGACAACCCCAGAGTGCTTTCTTCCGTGAACTTAACGGGTTATTCGT
GCTGGATCTAACTGTCACTGGTTGCTTGACCTAACCCTAACCCTAACCCT
AAAACGGACTACCGCAGAGATGCCTTCGGTGAGGTCCTTGAGTCGAGGAG
AAAAGAGCATCTGTTCGTGGAAGTGGTCCTAATTGATGGGGTGAACGATA
GCCCCGATCAAGCCGAAGCGCTCGCAGCGTTGTTAAAACCGCTCCCGACG
CGAGCCAGCGTCAATTTGCTGCCGTACAACGATACGGGACACCCTGCTTT
CCGGGCGTCGTCCAGAGAAGCTGTCAGCAAGTTCCAGAAAATCTTGACGG
AGCATGGATACGTGGCAACGATTCGGACTGCCAGGTATGTTGAGCCTAGC
ATTATCGCAGAAAACCGGCGATCTTCACCGGAGCTATTTGGTAAACGGAA
CCACCACAGCCTCGCGGTAGCCAGGTCTATTGCCTAAGTCCATAGGCTGT
TGCCTGTACACGAGTTCTGTTTTTTCTTGTCTGGTTGGCTGTAGTCAACT
TTGTCGAGCCTGGACAATGGCTGACGCCCTTGTTACGGTACACAGTCCGT
ATACCGTGTTTGGCGCTAATCCTACCATTGCTGCTCGTGCCAGGGGGGAC
AACGAGAGCTCCGCATGCGGGCAATTGGCGACATTGTTCAAGAATGGACG
G
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Coding sequence (CDS) from alignment at F-serratus_M_contig1014:25005..34905-

>mRNA_F-serratus_M_contig1014.227.1 ID=mRNA_F-serratus_M_contig1014.227.1|Name=mRNA_F-serratus_M_contig1014.227.1|organism=Fucus serratus male|type=CDS|length=2274bp|location=Sequence derived from alignment at F-serratus_M_contig1014:25005..34905- (Fucus serratus male)
ATGCGAGGGTCGAAAGCGTCCCCGCCAAGTAGCTTCAACAGCATCCCGGC
GGAATCATCCAATCCTCGGTGCCGATCACCTTCAATTTCGAGCGACGAAC
TGCTATCTTTAGGCCTAGACGAGATGGCAGAGATAATTGGAGGCTCTGGC
CGGGCGAAGATGGTTTGGACTGCTCTGGCTGAGGGTATTGACCCATTTTC
GAGTCAGGCAGGCTCCGACTACCTTACCCCCAAAACCACGGAGCAGTTGA
ACAAGGCTGTCGAATCCAGTGGTCTACCGTGGCAGATGCGAGGGTCGAAA
GCGTCCCCGCCAAGTAGCTTCAACAGCATCCCGGCGGAATCATCCAATCC
TCGGTGCCGATCACCTTCAATTTCGAGCGACGAACTGCTATCTTTAGGCC
TAGACGAGATGGCAGAGATAATTGGAGGCTCTGGCCGGGCGAAGATGGTT
TGGACTGCTCTGGCTGAGGGTATTGACCCATTTTCGAGTCAGGCAGGCTC
CGACTACCTTACCCCCAAAACCACGGAGCAGTTGAACAAGGCTGTCGAAT
CCAGTGGTCTACCGTGGCAGGTTGTGCGCGAATCGGTTTCCTTGTGCGGG
ACGCGGAAGCTTCTCATCCGATTGGAAGACGGACTCGATGTGGAAACCGT
CATCATTCCGTGTCTAACCGGCTCAAGGTTGTGCGCGAATCGGTTTCCTT
GTGCGGGACGCGGAAGCTTCTCATCCGATTGGAAGACGGACTCGATGTGG
AAACCGTCATCATTCCGTGTCTAACCGGCTCAAGATCCACTGTGTGCGTG
TCAAGCCAAATAGGATGTGCAAAAGGTTGCCAATTCTGTATGACCGGAAA
GATGGGATTCGTCAGAAACCTTACTGCCGGGGAAATCTTGGGCCAAGTGT
TCTTTGCTCGCCAAGCGGTCAGGCTACACCACCTGATCCACTGTGTGCGT
GTCAAGCCAAATAGGATGTGCAAAAGGTTGCCAATTCTGTATGACCGGAA
AGATGGGATTCGTCAGAAACCTTACTGCCGGGGAAATCTTGGGCCAAGTG
TTCTTTGCTCGCCAAGCGGTCAGGCTACACCACCTGCCTCCTCTTTCCAA
CGCGGTGTACATGGGGATGGGAGAGCCGCTCGACAACCCAGTAGCGGTGA
AGCGGTCGTTGGAGCTCTTGACTCATCCGCACGCTTTCGCCATGGCAAGG
AGCAAGGTCTCTGTGTCCACCGTCGGCCCGTCACCAAGCGCGATTCTTCG
GATGAGGGGGATGGCCTGTCGCCTGGCGTGGTCAGTGCACGCAGCCACGG
ACGATGTTCGGCGGTTGCTCGTACCAACTACCTCGCACACAATGGCGGAG
CTGAGCCTCCTCTTTCCAACGCGGTGTACATGGGGATGGGAGAGCCGCTC
GACAACCCAGTAGCGGTGAAGCGGTCGTTGGAGCTCTTGACTCATCCGCA
CGCTTTCGCCATGGCAAGGAGCAAGGTCTCTGTGTCCACCGTCGGCCCGT
CACCAAGCGCGATTCTTCGGATGAGGGGGATGGCCTGTCGCCTGGCGTGG
TCAGTGCACGCAGCCACGGACGATGTTCGGCGGTTGCTCGTACCAACTAC
CTCGCACACAATGGCGGAGCTGAGAGATGCCTTCGGTGAGGTCCTTGAGT
CGAGGAGAAAAGAGCATCTGTTCGTGGAAGTGGTCCTAATTGATGGGGTG
AACGATAGCCCCGATCAAGCCGAAGCGCTCGCAGCGTTGTTAAAACCGCT
CCCGACGCGAGCCAGCGTCAATTTGCTGCCGTACAACGATACGGGACACC
CTGCTTTCCGGGCGTCGTCCAGAGAAGCTGTCAGCAAGTTCCAGAAAATC
TTGACGGAGCATGGATACGTGGCAACGATTCGGACTGCCAGAGATGCCTT
CGGTGAGGTCCTTGAGTCGAGGAGAAAAGAGCATCTGTTCGTGGAAGTGG
TCCTAATTGATGGGGTGAACGATAGCCCCGATCAAGCCGAAGCGCTCGCA
GCGTTGTTAAAACCGCTCCCGACGCGAGCCAGCGTCAATTTGCTGCCGTA
CAACGATACGGGACACCCTGCTTTCCGGGCGTCGTCCAGAGAAGCTGTCA
GCAAGTTCCAGAAAATCTTGACGGAGCATGGATACGTGGCAACGATTCGG
ACTGCCAGGGGGGACAACGAGAGCTCCGCATGCGGGCAATTGGCGACATT
GTTCAAGAATGGACGGGGGGGACAACGAGAGCTCCGCATGCGGGCAATTG
GCGACATTGTTCAAGAATGGACGG
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