mRNA_F-serratus_M_contig1014.227.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1014.227.1
Unique NamemRNA_F-serratus_M_contig1014.227.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Match: A0A0G4G3K1_9ALVE (Radical SAM core domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G3K1_9ALVE)

HSP 1 Score: 297 bits (761), Expect = 2.670e-93
Identity = 163/367 (44.41%), Postives = 237/367 (64.58%), Query Frame = 1 
Query:   79 PSISS---DELLSLGLDEMAEIIGGSGRAKMVWTALAEGIDPFSSQAGSD----------YLTPKTTEQLNKAVESSGLPWQVVR--ESVSLCGTRKLLIRLEDGLDVETVIIPCLTGSRSTVCVSSQIGCAKGCQFCMTGKMGFVRNLTAGEILGQVFFARQAVRLHHLPPLSNAVYMGMGEPLDNPVAVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHAATDDVRRLLVPTTSHTMAELRDAFGEVLESRRK-----EHLFVEVVLIDGVNDSPDQAEALAALLKPLPTRASVNLLPYNDTGHPAFRASSREAVSKFQKILTEHGYVATIRTARGDNESSACGQLAT 1119
            PSIS+   DELL+     ++E+ GG+ RA+M+W  + +G+ P   Q   +          +++ +T ++L   +   G+ + + +  E VS CGTRKLL    DGL VETV+IP  +  ++TVCVSSQ+GC++GC FC TG+MG +RNL++GEIL Q+F A++  R   +P L   V+MGMGEP++NP  V+ ++E L     F  ++ KV++STVG SP++I ++    C LAWS+HAA+D+ R+LLVPTT H ++EL  AF EV+E+R+        L VEV L+ G+ND  + A  LA++L P+  R  VNL+PYNDTG    R SS E+V +FQ+ L   G  A++R  RGD ES+ACGQLAT
Sbjct:   60 PSISAGFADELLNSSFVNLSELCGGTTRARMIWDCVRDGVQPLGLQGDGESHGDGTVLPSFVSRETRQKLG--LHFGGMDFSLTQRGEKVSGCGTRKLLTEFRDGLQVETVLIP--SDDKTTVCVSSQVGCSRGCIFCSTGRMGLLRNLSSGEILCQIFQAQKRRRETGMPRLERVVFMGMGEPMNNPKNVREAIEALVDEKRFKFSKRKVTLSTVGVSPASIRQLVDFPCVLAWSLHAASDEKRQLLVPTTRHGVSELSGAFLEVMEARKHLKGSLRLLMVEVALMAGLNDGEEDARLLASVLSPVKDRVLVNLIPYNDTGAEGLRRSSEESVRRFQRALWAEGLRASVRVTRGDEESAACGQLAT 422
[Close]
BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Match: A0A0G4G5P9_9ALVE (Radical SAM core domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G5P9_9ALVE)

HSP 1 Score: 291 bits (745), Expect = 8.930e-92
Identity = 163/355 (45.92%), Postives = 224/355 (63.10%), Query Frame = 1 
Query:  121 EMAEIIGGSGRAKMVWTALAEGIDPFSSQAGSDYLTPKTTEQLNKAVESSGL---------PWQVVRESVSLCGTRKLLIRLEDGLDVETVIIPCLTGSR----STVCVSSQIGCAKGCQFCMTGKMGFVRNLTAGEILGQVFFARQAVRLHH-----LPPLSNAVYMGMGEPLDNPVAVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHAATDDVRRLLVPTTSHTMAELRDAFGEVLESRRKEHLF----VEVVLIDGVNDSPDQAEALAALLKPLPTRASVNLLPYNDTGHPAFRASSREAVSKFQKILTEHGYVATIRTARGDNESSACGQLAT 1119
            E++EI+GG+GR++ +W  +  G   F+ +    Y   K   +L+    SS L         P +VV E+V+ CGT KLL+ +EDG+ VETV+IP     +    +T+CVSSQ+GCA+GC FC TGKMG VRNL A EIL QVFFA++ +R        LPPL N V+MGMGEPL+NP  V +++E+LT   AFA+    V+VSTVGPSP+++  +R   C LAWS+H+A ++ RR LVPT++H+  ELRDAF EV+    +  +     +E  L++G+ND    A+A+  LLKP P    VNLLPYND G      S  E V+ F + L E G +  +RT RGD++S ACGQLAT
Sbjct:   71 ELSEILGGTGRSRALWENVKNGFY-FTEENTLPYYQDKHHLRLSARSVSSLLELTGGNPLPPQRVVSETVAPCGTVKLLVEMEDGMQVETVLIPNAEREKEKGTTTLCVSSQVGCARGCIFCATGKMGLVRNLRADEILAQVFFAQRRIRESSKEATPLPPLMNCVFMGMGEPLNNPKEVLKAVEVLTDRLAFALGPRHVTVSTVGPSPASVRGLREFRCGLAWSLHSAVEETRRQLVPTSTHSAVELRDAFLEVIGDPERPQVLRSCLIEATLLEGLNDDDRHADAMLELLKPFPKEVKVNLLPYNDIGVEGLARSPPENVAAFARRLQEGGRLCFVRTPRGDDDSCACGQLAT 424
[Close]
BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Match: R1FHH2_EMIHU (Radical SAM core domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FHH2_EMIHU)

HSP 1 Score: 278 bits (710), Expect = 1.910e-87
Identity = 172/343 (50.15%), Postives = 213/343 (62.10%), Query Frame = 1 
Query:  100 LLSLGLDEMAEIIGGSGRAKMVWTALAEGIDPFSSQAGSDYLTPKTTEQLNKAVESSGLPWQVVRESVSLCGTRKLLIRLEDGLDVETVIIPCLTGSRSTVCVSSQIGCAKGCQFCMTGKMGFVRNLTAGEILGQVFFARQAVRLHHLPPLSNAVYMGMGEPLDNPVAVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHAATDDVRRLLVPTTSHTMAELRDAFGEVLESRRKEHLFVEVVLIDGVNDSPDQAEALAALLKPLPTRASVNLLPYN-DTGHPA----FRASSREAVSKFQKILTEHGYVATIRTARGDNESSACGQL 1113
            LL++     A+++GGSGRAK+VW+ L +G DPF   +G   L  K    L  A  S+  P  ++  +VS CGTRKLL+RL  G   E VIIP   G+ ST+CVSSQ+GC +GC FC TG MG +R+L A EIL Q+  A  AVR H +PPL N V+MGMGEP DN   V+ +L            RS V VSTVGPSP  I  +  +  RLAWSVHAA D +RRLLVPTT H M+ELRDA+GE  +      L  EV LIDGVND  D A +L  LL PLP +  VNL+PYN + G  A    FR +  EAV  FQ+ L + G + T+RT RG+ ESSACG L
Sbjct:   12 LLAVPPTAAADLLGGSGRAKIVWSQLRDGRDPFEESSG---LGHKARHALELAF-SAQPPHSLLTSTVSACGTRKLLLRLRRG--DEAVIIP--QGAFSTLCVSSQVGCRQGCTFCATGTMGLLRSLAADEILAQLHAAAAAVRQHGMPPLRN-VFMGMGEPADN---VEEALS--PGERQRRRGRSYVCVSTVGPSPGHIRALEPLPARLAWSVHAADDRLRRLLVPTTRHRMSELRDAWGETADRG----LMAEVTLIDGVNDGADAAASLHGLLAPLPGKTRVNLIPYNANAGLGAAGRLFRPAQPEAVRAFQRRLLDRGLICTVRTPRGNEESSACGML 336
[Close]
BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Match: A0A7S0DYL3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DYL3_9CRYP)

HSP 1 Score: 277 bits (709), Expect = 1.050e-86
Identity = 160/349 (45.85%), Postives = 214/349 (61.32%), Query Frame = 1 
Query:  118 DEMAEIIGGSGRAKMVWTALAEGIDPFSSQAGSDYLTPKTTEQLNKAVESSGLP-WQVVRESVSLCGTRKLLIRLEDGLDVETVIIPCLTG-----SRSTVCVSSQIGCAKGCQFCMTGKMGFVRNLTAGEILGQVFFARQAVRLHHLPPLSNAVYMGMGEPLDNPVAVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHAATDDVRRLLVPTTSHTMAELRDAFGEVLESRRKEHL-FVEVVLIDGVNDSPDQAEALAALLKP---LPTRASVNLLPYNDTGHPAFRASSREAVSKFQKILTEHGYVATIRTARGDNESSACGQL-ATLFKN 1131
            +++A+++ G GRA  VW AL  G + F   +G  Y         +   +   LP  +V + + S CGTRKLLI +EDG  VETV+IP         SR+T+CVSSQ+GCA+GC FC TGK+G    L A EIL QVF   + +R  +LPP    V+MGMGEPL+N   V+R++++LT   AF +  + V+VSTVGP+P AI ++ G   R+AWS+HAA D VR+ LVPT  H+ A LRDAF EV  +R K  +  +EV L+DG+ND    A  +  L +P   L  +  +NLLP N  G P  R S  + V KF+ +L + G VATIR ARGD E SACGQL A L +N
Sbjct:   59 EDLAKLLQGPGRAHAVWKALRHGSENFEDISGVAY---------DALCQKCFLPDVEVKKVTKSECGTRKLLIEMEDGQAVETVVIPSEVNTKSGRSRTTICVSSQVGCARGCVFCATGKLGLRGQLEADEILMQVFHGLRVIREENLPPTVTVVFMGMGEPLNNFREVRRAIDMLTDHGAFDLHGNFVTVSTVGPNPEAIRKLLGCPTRIAWSLHAADDQVRKRLVPTHVHSTAALRDAFTEVTLTRNKRMMPLIEVTLVDGINDQEKHARDIVELFRPWKELGIKIKINLLPCNSIGDPDLRPSPEDVVVKFRNLLVQEGCVATIRKARGDQEGSACGQLSAGLMRN 398
[Close]
BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Match: A0A1Z5JXB4_FISSO (Radical SAM core domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JXB4_FISSO)

HSP 1 Score: 274 bits (701), Expect = 9.760e-86
Identity = 159/371 (42.86%), Postives = 225/371 (60.65%), Query Frame = 1 
Query:  103 LSLGLDEMAEIIGGSGRAKMVWTALAEGIDPFSSQAGSDYLTPKTTEQLNKAVESSGLPWQVVRESVSLCG------------------------TRKLLIRLEDGLDVETVIIPCLTGSRSTVCVSSQIGCAKGCQFCMTGKMGFVRNLTAGEILGQVFFARQAVRLHHLPPLSNAVYMGMGEPLDNPVAVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHAATDDVRRLLVPTTSHTMAELRDAFGEVLESRRKEH---LFVEVVLIDGVNDSPDQAEALA----ALLKPLP-TRASVNLLPYNDTGHPAFRASSREAVSKFQKILTEHGYVATIRTARGDNESSACGQLAT 1119
            +S+G++E+A+ +GG GRA++VW   + GIDP  +    D    ++ E + K + SS     + +E++                            T KLL+RL DGL+VETVIIP    +RSTVC+SSQ+GC +GC FC TG+MG +R+LT+ EI+ Q FFA++  R HHLP + N V+MGMGEP DN   V R+ ++LT    F ++  KV+VSTV P+P A  +     C LAWSVHAA +++R+ LVPTT ++M ELR    + L  R   +   + +EV L+DGVNDS  +A+ LA     L++ +P  + +VNL+P+ND G   +R  S E V  FQ+ L EHG    IR  RGD+ES+ACGQLAT
Sbjct:   20 ISMGVEELAQQLGGLGRARLVWDYYSIGIDP--AVYFDDSCETESIETIQKLLPSSRRSQPLGKEALDRLSSLYPAGRLEGGVASLSHISQSRDKTTKLLLRLADGLEVETVIIP-WGDTRSTVCISSQVGCRQGCTFCATGRMGKMRSLTSDEIIAQFFFAKKISRTHHLPEIRNVVFMGMGEPADNAENVVRATQILTTRELFQLSAMKVTVSTVAPTPDAFQQFVHAPCVLAWSVHAANNELRKKLVPTTQYSMEELRQGLIDTLLQRPMNNFRVVMLEVALMDGVNDSLKEADELAEFARVLVEQVPGCKMTVNLIPFNDIGQHLYRKPSEERVVAFQRRLWEHGIFTHIRNTRGDDESAACGQLAT 387
[Close]
BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Match: A0A8J5XTI2_DIALT (Radical SAM core domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XTI2_DIALT)

HSP 1 Score: 274 bits (700), Expect = 8.290e-84
Identity = 157/349 (44.99%), Postives = 212/349 (60.74%), Query Frame = 1 
Query:   97 ELLSLGLDEMAEIIGGSGRAKMVWTALAEGIDPFSSQAGSDYLTPKTTEQLNKAVESSGLPWQVVRESVSLCGTRKLLIRLEDGLDVETVIIPCLTGSRSTVCVSSQIGCAKGCQFCMTGKMGFVRNLTAGEILGQVFFARQAVRLHHLPPLSNAVYMGMGEPLDNPVAVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHAATDDVRRLLVPTTSHTMAELRDAFGEVLESRRKE--HLFVEVVLIDGVNDSPDQAEALAALLKPLPT-----RASVNLLPYNDTGHP-AFRASSREAVSKFQKILTEHGYVATIRTARGDNESSACGQLAT 1119
            ELL+   +++ +I+GGSGRA +VW  L  G DP  + + SD    +    L  A    G   ++   +V+  GT KLL+RL DGL+VETV+IP     R+T+CVSSQ+GCA+ C FC TG+MG +R+L A EI+ Q FF R+ VR   +PPL   V+MGMGEP DN   V  +   L     F  +R++V++STV P+P A  ++    C LAWSVHAA D +RR LVPTT  +M ELR+A    L S+ K      +EVVLI+GVND  + AEA+ A L+PL +     +  V+L+PYN   H  AFR  S E V  +Q +L   G    +RT RGD+  +ACGQLAT
Sbjct:  165 ELLTATREQLGQILGGSGRAALVWECLRRGEDPMGASSVSD----RAKGLLTLAGLGVGRAGELSHRTVTRDGTVKLLVRLTDGLEVETVLIPWPERGRTTICVSSQVGCAQACTFCATGRMGRLRSLRAEEIIVQAFFGRRVVRELGMPPLEGVVFMGMGEPADNADEVVAAARALGDDARFRFSRARVTISTVAPTPEAFGQLARAGCVLAWSVHAADDALRRRLVPTTRSSMVELREALRAALLSQPKNARQCMIEVVLIEGVNDRAEDAEAMLAFLEPLVSATRHAKVMVDLIPYNAVDHADAFRKPSFERVRDYQHVLKRGGIFTFVRTTRGDDGDAACGQLAT 509
[Close]
BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Match: L1IF22_GUITC (Radical SAM core domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IF22_GUITC)

HSP 1 Score: 268 bits (686), Expect = 3.230e-83
Identity = 153/342 (44.74%), Postives = 211/342 (61.70%), Query Frame = 1 
Query:  118 DEMAEIIGGSGRAKMVWTALAEGIDPFSSQAGSDYLTPKTTEQLNKAVESSGLPWQVVRESVSLCGTRKLLIRLEDGLDVETVIIPCLTG-----SRSTVCVSSQIGCAKGCQFCMTGKMGFVRNLTAGEILGQVFFARQAVRLHHLPPLSNAVYMGMGEPLDNPVAVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHAATDDVRRLLVPTTSHTMAELRDAFGEVLESRRKEHL-FVEVVLIDGVNDSPDQAEALAALLKP---LPTRASVNLLPYNDTGHPAFRASSREAVSKFQKILTEHGYVATIRTARGDNESSACGQLA 1116
            D++++++ G GRA+ VW  L +GI+          + P   E L K      +   V + ++S CGTRKLLI LEDG  VETV+IP         SR+T+CVSSQ+GCA+GC FC TG++G    L A EIL QVF   + +R  +LP   + V+MGMGEPL+N   V+R++E+LT   AF +  + V++STVGP+P AI ++     R+AWS+HAA D+VR+ LVPT +HT   LRDAF EV+ +R K+ +  +E+ L+DG+NDS   A  L    KP   L  +  +NLLP N  G P  R S  E   KF+ +L + G VA IR ARGD + SACGQL+
Sbjct:   51 DDLSKLMQGPGRAETVWKKLRQGIEEIHDIQ----VNPIIVEALCKKCYIPSI--DVKKVTLSSCGTRKLLIALEDGQSVETVLIPSPEHLESGKSRTTICVSSQVGCARGCVFCATGRLGLRGQLEADEILMQVFHGLRVIREENLPAKVSIVFMGMGEPLNNFKEVQRAIEMLTLQDAFRIHPNAVTISTVGPNPDAIRKLAQCPTRIAWSLHAADDEVRKRLVPTHTHTAVALRDAFMEVILARDKKLMPLIEITLVDGINDSEKHARDLVEFFKPWRELGIKIKINLLPCNSIGDPELRPSHPETTLKFRNLLVQEGCVAIIRRARGDADGSACGQLS 386
[Close]
BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Match: A0A482S623_9ARCH (23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S623_9ARCH)

HSP 1 Score: 267 bits (682), Expect = 7.360e-83
Identity = 139/364 (38.19%), Postives = 226/364 (62.09%), Query Frame = 1 
Query:   79 PSISSDELLSLGLDEMAEIIGGSGRAKMVWTALAEGIDPFSSQAGS----------DYLTPKTTEQLNKAV-ESSGLPWQVVRESVSLCGTRKLLIRLEDGLDVETVIIPCLTGSRSTVCVSSQIGCAKGCQFCMTGKMGFVRNLTAGEILGQVFFARQAVRLHHLPPLSNAVYMGMGEPLDNPVAVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHAATDDVRRLLVPTTSHTMAELRDAFGEVLESR---RKEHLFVEVVLIDGVNDSPDQAEALAALLKPL---PTRASVNLLPYNDTGHPAFRASSREAVSKFQKILTEHGYVATIRTARGDNESSACGQLAT 1119
            PS+ +D +L++  D++A  +GG+G+A++VW  L  G +P  S   +          + L+ K  ++L   + E   +P  +V ES++  GTRKLL+RL D  ++E+V+IP +   R+T+C+S+Q+GC +GC FC+T  MGFVRNLTA E+  QV    +     ++P +SN V+MGMG+   N   V +++  +T  +  ++A+SKV+VSTVGPSP     +  M C +AWS+H+  + +RR LVP++ +T+AELR+     L +R   R   + + + LI+ +ND P+ A  LA  L+P+    ++ +++L+PYND     F   +RE ++ FQ++L + GY  T+R  RGD+ES+ACG LAT
Sbjct:   17 PSMHTDHVLTMPFDQLATELGGTGKARIVWNHLRHGRNPLLSVQSTGNVTNHSKDHELLSDKAQQRLKYLLGEGDLIPNTLVGESLATDGTRKLLLRLSDNQEIESVLIPSVKHDRTTICISTQVGCDRGCAFCLTATMGFVRNLTATEMAAQVIRGIELATQRNMPVVSNVVFMGMGDSGRNIQEVGQAVACMTDGNRLSVAKSKVTVSTVGPSPQIFTDIAQMNCTIAWSLHSCDEQIRRRLVPSSKYTLAELRNGLVAALRARSSMRMRTIMIALTLIENINDKPEDALLLAEFLRPVLKATSKIAIDLIPYNDISVVGFSQPTRERINAFQQVLRDQGYFCTVRVTRGDDESAACGMLAT 380
[Close]
BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Match: R1DC19_EMIHU (Radical SAM core domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DC19_EMIHU)

HSP 1 Score: 266 bits (681), Expect = 1.170e-82
Identity = 160/333 (48.05%), Postives = 210/333 (63.06%), Query Frame = 1 
Query:  145 SGRAKMVWTALAEGIDPFSSQAGSDYLTPKTTEQLNKAVESSGLP---WQVVRESVSLCGTRKLLIRLEDGLDVETVIIPCLTGSRSTVCVSSQIGCAKGCQFCMTGKMGFVRNLTAGEILGQVFFARQAVRLHHLPPLSNAVYMGMGEPLDNPVAVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRM-RGMACRLAWSVHAATDDVRRLLVPTTSHTMAELRDAFGEVLESR--RKEHLFVEVVLIDGVNDSPDQAEALAALLKPLPTRASV--NLLPYNDTGHPAFRASSREAVSKFQKILTEHGYVATIRTARGDNESSACGQLAT 1119
            S +   VW+ L +G+DP S    +++     +  L + +E+   P     V   S++  GT+KLL+RLEDGL VE V+IP + G  +++C+SSQ+GC++GC FC TG MG +RNL A EIL QV+ A + +R   LPPL N V+MGMGEPL+N   V+R++ELL HP AFA++   V VSTVGPSP+ I R    + CRLAWSVHAA D +R+ LVPTT H+M ELRDAF   L ++  R   L VE+ L++G +     AE LAALL P   R  V  NL+PYN  G          AV  FQ+ L EH  + TIR  RGD+E SACGQLAT
Sbjct:   61 SDKGDGVWSLLRKGVDPRSEGELTEWSPNLYSPSLRRRLEADCGPVCAGAVSDSSIASDGTQKLLLRLEDGLAVECVLIPMVGGKTTSLCISSQVGCSRGCTFCSTGTMGLLRNLRAEEILAQVWLALRTIRQRRLPPLVNVVFMGMGEPLNNLDEVRRAVELLVHPKAFALSARCVCVSTVGPSPAHIRRAAEALPCRLAWSVHAADDALRKTLVPTTRHSMGELRDAFLASLATKPARLRGLVVELALLEGAH-----AEQLAALLHPF-GRGMVLANLIPYNYNGL---------AVHAFQQRLWEHKLLCTIRETRGDDERSACGQLAT 378
[Close]
BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Match: A0A1Z5JWW4_FISSO (Radical SAM core domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWW4_FISSO)

HSP 1 Score: 264 bits (675), Expect = 6.710e-82
Identity = 155/371 (41.78%), Postives = 216/371 (58.22%), Query Frame = 1 
Query:   43 IPAESSNPRCRSPSISSDELLSLGLDEMAEIIGGSGRAKMVWTALAEGIDPFSSQAGSDYLTPKTTEQLNKAVESSGLPWQVVRESVSLCGTRKLLIRLEDGLDVETVIIPCLTGSRSTVCVSSQIGCAKGCQFCMTGKMGFVRNLTAGEILGQVFFARQAVRLHHLPPLSNAVYMGMGEPLDNPVAVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHAATDDVRRLLVPTTSHTMAELRDAFGEVL--ESRRKEHLFVEVVLIDGVNDSPDQAEALAALLKPLPT----RASVNLLPYND----TGHPA-FRASSREAVSKFQKILTEHGYVAT-IRTARGDNESSACGQLAT 1119
            +P  +  P  RSP       LSL LDE++  +GG GRA+  W A   G DP         L       L +  + + L  Q         GT KLL++L DGL VETVIIP     RSTVC+SSQ+GC + C FC+TG+MG +RNL+  EI+ QV++A++ V    +PP+ N V+MG+GEP DN  AV  + E LT PH FA+   +V++STV P+P A  ++      LAWSVHA  D +R+ LVPTT ++M ELRD     L   S+R+ ++ +E+ L+D +ND+ + A+ L    +PL      R  VNL+P+ND    TG  A +R  S E +  FQ+ L + G +   IRT RGD+E +ACGQL+T
Sbjct:   35 LPTTTPRPSSRSP-------LSLTLDELSVQLGGKGRAQACWEAYRSGTDPILGTEAQQRL-------LQRPADVATLHHQTTCHD----GTTKLLLQLPDGLQVETVIIPWPERQRSTVCISSQVGCRQACTFCLTGRMGLLRNLSCDEIVSQVYWAQRVVHSKEMPPIDNIVFMGLGEPADNVDAVVAAAECLTDPHRFALTPRRVTISTVAPTPDAFAKLGRAPAVLAWSVHATRDVLRKQLVPTTRYSMTELRDGLVSTLVQRSKRRRNILLEITLLDQINDTIEDAQHLVEFCQPLVAIPGVRVIVNLIPWNDIQVQTGAAAQYRQPSPERIEAFQQYLVQQGNLRCFIRTTRGDDELAACGQLST 387
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1014.227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0G4G3K1_9ALVE2.670e-9344.41Radical SAM core domain-containing protein n=1 Tax... [more]
A0A0G4G5P9_9ALVE8.930e-9245.92Radical SAM core domain-containing protein n=1 Tax... [more]
R1FHH2_EMIHU1.910e-8750.15Radical SAM core domain-containing protein n=2 Tax... [more]
A0A7S0DYL3_9CRYP1.050e-8645.85Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A1Z5JXB4_FISSO9.760e-8642.86Radical SAM core domain-containing protein n=1 Tax... [more]
A0A8J5XTI2_DIALT8.290e-8444.99Radical SAM core domain-containing protein n=2 Tax... [more]
L1IF22_GUITC3.230e-8344.74Radical SAM core domain-containing protein n=1 Tax... [more]
A0A482S623_9ARCH7.360e-8338.1923S rRNA (Adenine(2503)-C(2))-methyltransferase Rl... [more]
R1DC19_EMIHU1.170e-8248.05Radical SAM core domain-containing protein n=1 Tax... [more]
A0A1Z5JWW4_FISSO6.710e-8241.78Radical SAM core domain-containing protein n=2 Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1014contigF-serratus_M_contig1014:25005..34905 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score524.6
Seed ortholog evalue3.8e-146
Seed eggNOG ortholog2880.D7FQQ6
KEGG koko:K06941
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Radical SAM superfamily
EggNOG OGs2QV91@2759,COG0820@1
EC2.1.1.192
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Exons6
Model size1137
Cds size1137
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1014.227.1prot_F-serratus_M_contig1014.227.1Fucus serratus malepolypeptideF-serratus_M_contig1014 25005..34905 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928813.6075191-CDS-F-serratus_M_contig1014:25004..250621622928813.6075191-CDS-F-serratus_M_contig1014:25004..25062Fucus serratus maleCDSF-serratus_M_contig1014 25005..25062 -
1690962583.868055-CDS-F-serratus_M_contig1014:25004..250621690962583.868055-CDS-F-serratus_M_contig1014:25004..25062Fucus serratus maleCDSF-serratus_M_contig1014 25005..25062 -
1622928813.649177-CDS-F-serratus_M_contig1014:25321..255881622928813.649177-CDS-F-serratus_M_contig1014:25321..25588Fucus serratus maleCDSF-serratus_M_contig1014 25322..25588 -
1690962583.8794873-CDS-F-serratus_M_contig1014:25321..255881690962583.8794873-CDS-F-serratus_M_contig1014:25321..25588Fucus serratus maleCDSF-serratus_M_contig1014 25322..25588 -
1622928813.6675348-CDS-F-serratus_M_contig1014:25880..261491622928813.6675348-CDS-F-serratus_M_contig1014:25880..26149Fucus serratus maleCDSF-serratus_M_contig1014 25881..26149 -
1690962583.8932643-CDS-F-serratus_M_contig1014:25880..261491690962583.8932643-CDS-F-serratus_M_contig1014:25880..26149Fucus serratus maleCDSF-serratus_M_contig1014 25881..26149 -
1622928813.6882813-CDS-F-serratus_M_contig1014:26463..266141622928813.6882813-CDS-F-serratus_M_contig1014:26463..26614Fucus serratus maleCDSF-serratus_M_contig1014 26464..26614 -
1690962583.9058552-CDS-F-serratus_M_contig1014:26463..266141690962583.9058552-CDS-F-serratus_M_contig1014:26463..26614Fucus serratus maleCDSF-serratus_M_contig1014 26464..26614 -
1622928813.701144-CDS-F-serratus_M_contig1014:27162..272691622928813.701144-CDS-F-serratus_M_contig1014:27162..27269Fucus serratus maleCDSF-serratus_M_contig1014 27163..27269 -
1690962583.9147196-CDS-F-serratus_M_contig1014:27162..272691690962583.9147196-CDS-F-serratus_M_contig1014:27162..27269Fucus serratus maleCDSF-serratus_M_contig1014 27163..27269 -
1622928813.7194002-CDS-F-serratus_M_contig1014:34620..349051622928813.7194002-CDS-F-serratus_M_contig1014:34620..34905Fucus serratus maleCDSF-serratus_M_contig1014 34621..34905 -
1690962583.923642-CDS-F-serratus_M_contig1014:34620..349051690962583.923642-CDS-F-serratus_M_contig1014:34620..34905Fucus serratus maleCDSF-serratus_M_contig1014 34621..34905 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1014.227.1

>prot_F-serratus_M_contig1014.227.1 ID=prot_F-serratus_M_contig1014.227.1|Name=mRNA_F-serratus_M_contig1014.227.1|organism=Fucus serratus male|type=polypeptide|length=379bp
MRGSKASPPSSFNSIPAESSNPRCRSPSISSDELLSLGLDEMAEIIGGSG
RAKMVWTALAEGIDPFSSQAGSDYLTPKTTEQLNKAVESSGLPWQVVRES
VSLCGTRKLLIRLEDGLDVETVIIPCLTGSRSTVCVSSQIGCAKGCQFCM
TGKMGFVRNLTAGEILGQVFFARQAVRLHHLPPLSNAVYMGMGEPLDNPV
AVKRSLELLTHPHAFAMARSKVSVSTVGPSPSAILRMRGMACRLAWSVHA
ATDDVRRLLVPTTSHTMAELRDAFGEVLESRRKEHLFVEVVLIDGVNDSP
DQAEALAALLKPLPTRASVNLLPYNDTGHPAFRASSREAVSKFQKILTEH
GYVATIRTARGDNESSACGQLATLFKNGR
back to top

mRNA from alignment at F-serratus_M_contig1014:25005..34905-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1014.227.1 ID=mRNA_F-serratus_M_contig1014.227.1|Name=mRNA_F-serratus_M_contig1014.227.1|organism=Fucus serratus male|type=mRNA|length=9901bp|location=Sequence derived from alignment at F-serratus_M_contig1014:25005..34905- (Fucus serratus male)
ATGCGAGGGTCGAAAGCGTCCCCGCCAAGTAGCTTCAACAGCATCCCGGC
GGAATCATCCAATCCTCGGTGCCGATCACCTTCAATTTCGAGCGACGAAC
TGCTATCTTTAGGCCTAGACGAGATGGCAGAGATAATTGGAGGCTCTGGC
CGGGCGAAGATGGTTTGGACTGCTCTGGCTGAGGGTATTGACCCATTTTC
GAGTCAGGCAGGCTCCGACTACCTTACCCCCAAAACCACGGAGCAGTTGA
ACAAGGCTGTCGAATCCAGTGGTCTACCGTGGCAGGTGCGCTTGCTTCTG
CTTTCGCTCCAGCCATCGCCCTGTCTAAATGAGTTAGCCGGTATTACAGT
ATTCGAAATTTGAACCTATCTCCATGAATTCGGATTTTTTCATGTGCTTT
CTTCTCGTTATATATATCACGTCTGCTATTATGTCTACAGCGTTGTTTTG
TTACACAGTTTTCAGTTTTCAATATTTCACACACATCCAAGGCAACGCAA
TCCTCCCCGCTGCATCTTCCGAGCATCCACACCGCACTGTTTTGTTTTGT
CTGAGAGACAGAGACAGAGAATGAGATTGGAATCTTGGGTGGGTAGTAGA
CTGATGACTGTTCAAAGAAAAATATGAACGCATTTAGACCTCCTGAATAT
CCCGCAGTCAGCGGGGAAAAATGTCAAAACTTTTAGGTAGGATCATAGGC
TGTAAAGACATTTAATCGGATTCCCCAATGGTAGTAACATAGGGTCAACA
GAACAATGTCGGGGAGAGACGCTACGTTAATTGCATCAACCGCCATGCAG
GGACACCATACAAAAAAAGAACCAAAGACACGATAAGCCTGAATTACAAC
TCAATTTGTAACATTTATGAAGGGTCTAGGATCGGATGGGTATCGATGAC
AGGATGAAGGAAATATACTACGGTATCAATATTAATTTCACACTCTTGCT
ATATGTGATGACCGTACATACAGTCGTGCCGGGTTGTAATATTAATAGTT
TGTGGGCTTAATTGTGTTTAAAGAAAATCAGAACAGCACCTAGACCTTTT
GAGCATCCCCCGGTTAGAGGGGAAAAAATGTTATTCATCATTACCCTCTA
GCCATCCTAGGACGTGGAGAAGGACACTGTTTATGGTTCAGGGCTAACCA
TAGCGGACAACGGCGGACAGGGAACCGCACAGATCCACAACAGTGTTAGT
TGGCATCTAAAACATTGGACTACTGAGTCACGTGACTAGTAGTCTAATGG
TTAAACGCTTCTAACTTACAAAAGATATGTCTTGGGCTCTCTGGCGTCTT
TTTCCGGTAGCGACAGTGATCTCCGAGGTCCTCCCCTCGCCACGCACTGC
CGTATCTCAATGGCCGCAACTATAATAACATTTTTCTACTTTTTCGTTTT
GTCGCTACCGGGATTGAACCCGCGACGTATAATTTGTATTTGTTGGCATG
TAAACCATTGGACTACTCGAGTCACGTGACTCAGTAGTCCAATGGTTTAC
ATGCTAACAAACACACAATATAGTCGCGGGTTCAATCCCCGGTAGCGACA
AGAATGAAAAAATGGAAAAAATGTTAGTTGCGGCCATTGAGATACTGCAG
TGCGTGGCGAGGGCAGGACCTCGGAGATCACTGTCGCTTCCGGAAAAAGA
GGCCAGAGAGCCCAAGACATATATTTTGTAAACCATTGGTCGACGAGGGA
AAGCAATGGCTGAATCCTTCTCGCGAGAAAAATAAAGGCACGCACCGCAG
AAAGAAGGTGGATGAGAAATCCTATGTGACCTTCCTCCTGTGTGACCCCG
GCTGGTACGTCCAACGAACTTGATGTCCAGAATGAATGGGAAGAAAACAC
ACAAGACACACACTCAGTCACGTGACTGAGCAATCTAATGGTTAAACGCT
TCTAACTTACACACAGATTAGTATAATGTGGTGTGGAATCTGGCATAACA
CCCAAACACTGGGTGCGGAGAGCGCCATGTTGACGTCGTTTTCCTGGCAA
CTTTAGGGTACGATACCGCAAAATCATGTTCAACCTCATGGGTCCAGCCG
TACCACCACCGCCTTGTCCCGTACAAATCCTTCGTCGGAGGATAGCAACA
CTACAGATAGTGTGGTTTTCGGTGTTCTAGCTGTATGTCGAATCGACAGT
CCAATGTAGGTGTACCAGGGTCTAATATCGGTGATCAAAGTCAGGCGTGC
GAAACGAGGCCGTGCTTGTTTTTGTAACCTTGCATTGGAGTCAACAGCTG
TACTGATATACATGGTAAAATATAGTACACACTACGGTACTGTAGTGTTT
TGTATCACTTTTAAAAATCAGTGAGCTGTACATCATTTCCAAGTCACACG
GTACGGTTGTACTAAAAGCAGACTATCACTGCTCATGTACTACAGCAGAC
TATATACTACTATCATACTTCTGTATCGACACTCCGACCATCTGCGATGA
AAGCTACGGCAGACCCAAGTATGGTTTATACAACAGTGCTTCTCAAGTTG
TAACCTTGCATTGGAGTAGCTGTGCTAATATAAATATTGAATATTGTACA
TACCGTGTTGTTTTGTATCACTTTTTACAATCATCGAGCTGTGCAACGGT
ACTTTCAACATGCCCACTCCATACCAATAGTGCGTGTGGGAAATATATAT
TAATTGGTCCATGGTGACCTGCCAAGGCAGGACCCGTTAGGAACTACCTT
GAGGTTTACTGACCCTGTGCCGGCGCACTCTCGGCAGTGAACGCCGTCGG
TACGCAAGTACGTGACCCGATAAACTCGGGACTGACCCGATGGCGTATGA
CGGTTTAATATATAAACGAACGCCCCCCGGAACTTGGGAGGAATCCCGTA
AGTCAGCACCAGATTCAATTCAGCCTGAGTATGGAGATGGGCAGACTGAC
GCGGGACGGGGCTGCCGAACCTGTTTCGCGAGACCAAATTCTCAGGCGCG
AACGGGGACAGAGAAATATCGATTTTCCCTGTTCAGCTGACCACTAGCAG
GAGTGGAAACCTTACCCGGTTGATCCATACTCTTGCTGTATGTGTGACCA
TACATGTGTGACCATACATCATTTCTAAGTCGCACGGTAGGGCTGTACGA
AAAGCAGACTATCACTGCCCATGTACTACAGCAGACTATGTATGTGTGTA
TGTATGGTCACACATGTAGCAAGAGTATGGATCAACCAGGTAGGGTTGCC
AATCCTGGTCGTGGTCAGCTGAACAGGGAAAATATCTGCTACTGCTGCTG
TATCGACGCTTCGACCATCTGCGATGAAAGCTATTGCAGAACGAAGTATG
GTTTATACACCAGTGCTTCTGGAGATGTAACACTGTAAGTACAAGCTATG
GTTTCCTGGTACGGAGGCCAGAATAAAATACCTGGTTTTGTATGCACTAT
GCACTATACACTATTAGCAGTGATCTGAGAGGATACCAGTACTTGACTCG
GGCGACAAGCACCATGATGATGTCAAGTCTCTTTTAAAGTAGTTAACAGC
AACACTTGAAGGGTAGGTAGCAATGTCATGATACCAAATACTCTTGGAAT
CGACATGGCAATCATATCATCTCACTGTCCGAGTCCTTTCGTATACACCC
GCACCCCTTCACCCATTCATACCAAGGCTACCTTCTGCCGTGTTGCATTA
GATCAAATCGCCCAGGGTCTAATCTTAGTCGCTTAAGTCAGGGTATCTGA
GCTGTTCCTCCCTGTACACACACCAGCTCGATTTGCTACAAAAAATAATA
ATTTCAGTGTGGTGCTCGCCATCTATGGGTTGGTTCTCTTAACGCGGGAC
TTCGCCGGAGATGATGGTGAGATGCGTCTTTGGTGGCATGTACCCTTGAT
CTGGTCTTCCGCGACACTCACAGGATATATGCCCTGGGGTGTCCCAGCCC
GTGCTAACTCGGGTCCCCTAATACCCTAGATCTGGTCTTCGGCGACACTC
ACAGGATATATGCACTGGGGTGTCCCAGCCCGTGCTAACTCGGGTCCCCT
AATCCCGCCGCGCTTTTAAAATCGACGTTCTTTGGCCTTGGCCAGTTTTA
TTAATATCGTGGGACAGAACTGGTCTGCAAACGCAAGACTTCGCACACCT
CTGCAACGAACAGTGATACAGCGGGGCCTACCTCCGAGGTAATCACAGCT
ATCCCAGACAGCGTGAATCAGCGGAATAAGTCAGTGATTTCTACGTGATA
AAGAGGCGTTTATAGGCAACACTGTAGAATGGTACACACTTACCTACAAG
GTAGCAGTTATGGTGTAGAAATGAAGTAAAAATGAACTGTAACCGGTCGC
CCCGGTGGTTCAGTTGGTGACCTCGAAACCTTCTTTCATTTGGACATGAG
TTCGAAGTTCGAATCTCGGTGCATTCACACGAACTGTGATTTTTCCTCAC
AAAAAAAAGAGCCCAACAAGTCGAGAACGATTACTTCGTGGGTATAAAAG
GTTCGACTTCACGATGGACGAGGGAAAGGGAAGGCTGAAGCCTTCTCGCG
ATAAAAAGTAAGGCAAGTACCGCAGAAGGAAGAAGGTGGAGAAAGCCTGT
ATGACGTTCCTTCTGTGTGACCTCGGCCACAAATCTGACGTCCAGAATAA
ATAGGATGACAACACACACACACACACACACACACACACACACACACACA
TAGAATGACTAGGATGACAGGGCCGGATTGCGTGGTTATGTGCAATTTAA
TAAATACACACACACACACACAGTATCATTGATCCCCCCTCGGGAGGATC
AATGCGAGTGGCATAGAATGACTAGGATGACAGGGCCGGATTGCGTGGTT
ATGTGCAATTTAATAAATATACACACACACACACACACACTACGTCTGAT
CAGAGGTTTTCGTAATATGTATCATTGATCCCCCCTCGGGAGGATCATTG
CGAGTGGAATAGAATGGCTAGGATGACAGGGCCGGATTGCGTGGTTATGT
GCAATTTAATAAATACACACACACACACACTTTTCGTAATAAGTATCATT
GATCCCCCTCGGGAGGATCAATGCGAGTGGCATAGAATGACTAGGATGAC
AGGGCCGGATTGCGTGGTTATGTGCAATTTAATAAATACACACACACACA
CACACACACAACAATATTGGGACTAGGACCGGATGGGCGTCGATGCAGGG
AATCTAGTCATGATGTAGAACGGTACATACTTATAAACGTAGCTGTTGTG
GTGTCAAAATTAAGTTTAGTAGAGGAAAAACTCCACCTGAGATTTAGTAC
AGTTCTTCAATGATAGTCTCATGGGGTTCACTGTGTAATACTGGAACTAC
CTTGAGGATTACTGGCCCTGTGCTGGCGGACTCGCGGCGGTGAACGCCAT
CGGTACGCAATTGCGTGACCCGATAAACTCGGAAATAAACGGACACCACC
GCGGAGATCGGGAGGAATCCTCCAAGTAAGCACCAGATTCAGCCTGAGTA
TGGAGATGAGCAGGCTGACGCGGGACGGGACGGCTGAACCCGTCTCGCGA
GACCAAATTCTCAGGCACGCACGGGGAGACAAGGAAATATTATTTTCCCT
GTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTTGATCCATAC
TCTGCTATATGTGATGGCTATACATACATACATACATACATATATACATA
CATACATACCTCGGGAACCTGACTTTTTGTTTCCCAAAGCGAATCAAGAG
GGTTGCGTGAGTATCGCGGAAGTTGTGCTGGCCACTCGACACTTTTTCCA
GCTTCGTCTCTCAGAAAAGTTGAAGGAAAAGATGGAAACCTTTATGCGGT
GTAAGGGGTGGGAGCTGATCAGGACGCCGCCGTACATGCCATCGTTTCAG
CCGATCGAGCTGTTCTGGGCGCATGGCAAGCGGTATGTCAGTCTCAACTT
TTGGTTGAAGTGTAATATGTCGGAAGTCTGGGAACAGCTCCGAAAGGGCT
TCTACGGGGACTCGGAGTGGAAGGGACAAGAAGTGGGTTGGAAGCCGGCA
AATTGTGCCAACTTGGTGTGCTACGCCATCGGCAAAATGAATGCTTGGAT
AGAGAAGTACGGCGGTGGGAAACTGACTGGTATAGTAGGGAACTTTGCGG
TTGCCGATTTCGATAAGGACGAAGGTCCAGTCAGCTTGGGTGATGAAAGG
GACTTGAGGAGGAAATGGCAAACGATTGACAGGAAGAGGAGGTTGATAGT
TGATAATGAATGATAATGATGAAACTGAGCCGTGAATTAACCAGAGTTAT
CGAGCCGTGAAATGGGTTGGCAGCGTCATTGCCTATTTGAATCGTCAGGC
GCGCGGAGAGTATTCCGATATAAAGCAGAGCCTATGATGAGGAATAAGTG
TCGAGTATCTCCAGACAGGACTTCTTCGGGCGATATTCGCGACTGCTGTA
TAATTTGATCCCAAGTACGCGCGCTTGATGTTGGGTCTAGTGTACTGTAC
CAAGAAAATGCCTATTAATAATTTATAGCTTTTCTGTTTGCGCTGTACGC
ACGAACCACGTCTGAACAGCTTACATGACACGTCGTCAAAATATCTGTTT
GAAAAAATAGAACATGTGTTCTGTGGCTTGTAATTCAGATTCTGAACTAC
TGGGAGCATTCCAACAGTCGAATTTCTATATTGGTCCGTACCCAAAGATA
TCGTCTTGACGCGGATAAGTTTCCGATGTCCTCGGGTGGTTGGAGGGTGC
AAAGATTTTGTCGTGATTTGGATCCCTCTTGGTTTGAGTAGCAGGTTGTC
ACCATGATGTGGCCCGTTGACCTTCGTACATCTTGATAACCATGGGCAGG
ATCGGCCTTTGATAGTAATAGGTCTATGGCCGACTCATTGTATTAATATT
AATAGTTTATTTTGTCGGAGGACAATGCGCTACATATGCGATTCAGTCAA
TCAACCATCAACCAAAATACACCATTAATAACGCCCAAATTCTGGAGAAA
GGTATTTGCTTTAAAAAATATATGTGTGCTGTGATTGGTCTATTTAGGCG
GGAGTTTCGTAATTTGTCTGTACCCTCTGGGGTAAGTGACTTCAAAGCCT
CAAGATACCAGGTATTCTATTGGTATTTGCGGAGGCTCTTTTCTACGGTC
AAGTTAAATCAGCACCTGGCGTGTAACTAAGTACGGTAGATATATATATA
TTATCACGGTCGTCTTTATCGTGAAACATTTTTCCGGGGCAAAATTCAGG
CAAAAAAGTGGAGGAAGATTTTCTGCATTAGAACTTAGAGGATTCCTCCC
GATCTGCGCGGCGGTGTCCATTTATTTATTTCAACCGCCAAACGCCATAG
GGCCAGTCCCGAGTTTATCGGGTCACGCAATTGCGTACCGATGGCGTTCA
CCGCCGTGAGCCCGCCGGCACAGGGCCAGCAGTCATAGTCATAGTCATAG
TCATAGTCATAGTCCTCAAGGTATGTAGTTCCAGTAATGGGTGCTGCCTT
ACCTATAGCAGATATCACCATGGACTATGACCAATTAATGTGCGCCTCTC
TTTTCCACCCCCACTACTTGTATTCGTACGAAGTGGGCATGTCGAAACTA
TCGGAAGCTATTGTATTAAGTATTAAGCAATGTCCCCTTCGATTGTAATT
CCTCATTGCCCACGTGTGTATTGCACCGTTGTCTAGGTTGTGCGCGAATC
GGTTTCCTTGTGCGGGACGCGGAAGCTTCTCATCCGATTGGAAGACGGAC
TCGATGTGGAAACCGTCATCATTCCGTGTCTAACCGGCTCAAGGTTCGTC
GCTTTTCGTTACATACCTTTTTTGTGTCTCTTTTTCTTCCTTGTGGAGGT
ATAAGTGTAGTATAAGTGTAAGTGTAAAAAGGAAATAAAATAACCTGGCT
TCCGGCGATCCCTAATTTGATCCTAATTTGATCCCAATTTGATCTAGTTT
CTGTACATAGTAGCCCAACTAATAGTGTTCGAGCTTCTTTAATTGAAAAA
AAATGGGCCGTTCCCGCTACTCGCCATTGCATATTTAATACTCCGTACAA
TTTAATATTTTATCTGTGTTTATATGTATATATATATATATATGTATGTA
CCATCTTCTCCCGGACAGTTCATATTTTTGCTTCCTTTTTACATAAGATA
TTCAACCTTTGGGCCACCGACTATTAATTATGTATCTGATAAAGTCTCTA
CCAGGTTTTTGAACTGTGGATAGATAGCCTCTGGTCAACACGATGTCGAA
AAGCGCCGCTCGAATTGATTTGAACCTCTTTTTTCACTGTTATATAGTAT
TATAAGTTCCAACTGCCTGCATCTCTCTCGGAACACCCCAGATCCACTGT
GTGCGTGTCAAGCCAAATAGGATGTGCAAAAGGTTGCCAATTCTGTATGA
CCGGAAAGATGGGATTCGTCAGAAACCTTACTGCCGGGGAAATCTTGGGC
CAAGTGTTCTTTGCTCGCCAAGCGGTCAGGCTACACCACCTGGTGAGAGA
TCAGGCTGTTTTTATCCCTTGTTTGACCACCGAAATATACCTAGGTAGGA
CAAGGGAAATTACAAAGGCGGTACCTGGCTATAGTGGGCTTGTCATGATG
GTAGCACGCCACATGATAAGCCGCGTATTTTTCACATGTACCGTTGCTGA
TAGTTTCAGGAAGATGTAACTGGGTCTCTACGGAGATTCAATCTATTATT
ATTTATAGGAGCAGTTCACCTCAAAAAACGTAAACACTCACTGTACTGTA
CTGTACCTGGTAATATACTGTACTGTACGTGTGACCGACAACTACTGCTG
TTGCAGCCTCCTCTTTCCAACGCGGTGTACATGGGGATGGGAGAGCCGCT
CGACAACCCAGTAGCGGTGAAGCGGTCGTTGGAGCTCTTGACTCATCCGC
ACGCTTTCGCCATGGCAAGGAGCAAGGTCTCTGTGTCCACCGTCGGCCCG
TCACCAAGCGCGATTCTTCGGATGAGGGGGATGGCCTGTCGCCTGGCGTG
GTCAGTGCACGCAGCCACGGACGATGTTCGGCGGTTGCTCGTACCAACTA
CCTCGCACACAATGGCGGAGCTGAGGTCAGACCATTTGAACATATTTGTA
TCATGACATTCCTGCCATACGGGCTTTGCTTCCAGCTGCAGAGCCGCCGC
AGCTCGCGCGCCTTGTCGTCGAGCGCTCACCAAGATTCATGATGATGAAA
TGGTGTACCGTATCGCAAAGCGTGCAAACCTGGACATAGAATGATATGTC
CCTCGACAACCCCAGAGTGCTTTCTTCCGTGAACTTAACGGGTTATTCGT
GCTGGATCTAACTGTCACTGGTTGCTTGACCTAACCCTAACCCTAACCCT
AAAACGGACTACCGCAGAGATGCCTTCGGTGAGGTCCTTGAGTCGAGGAG
AAAAGAGCATCTGTTCGTGGAAGTGGTCCTAATTGATGGGGTGAACGATA
GCCCCGATCAAGCCGAAGCGCTCGCAGCGTTGTTAAAACCGCTCCCGACG
CGAGCCAGCGTCAATTTGCTGCCGTACAACGATACGGGACACCCTGCTTT
CCGGGCGTCGTCCAGAGAAGCTGTCAGCAAGTTCCAGAAAATCTTGACGG
AGCATGGATACGTGGCAACGATTCGGACTGCCAGGTATGTTGAGCCTAGC
ATTATCGCAGAAAACCGGCGATCTTCACCGGAGCTATTTGGTAAACGGAA
CCACCACAGCCTCGCGGTAGCCAGGTCTATTGCCTAAGTCCATAGGCTGT
TGCCTGTACACGAGTTCTGTTTTTTCTTGTCTGGTTGGCTGTAGTCAACT
TTGTCGAGCCTGGACAATGGCTGACGCCCTTGTTACGGTACACAGTCCGT
ATACCGTGTTTGGCGCTAATCCTACCATTGCTGCTCGTGCCAGGGGGGAC
AACGAGAGCTCCGCATGCGGGCAATTGGCGACATTGTTCAAGAATGGACG
G
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1014:25005..34905-

>mRNA_F-serratus_M_contig1014.227.1 ID=mRNA_F-serratus_M_contig1014.227.1|Name=mRNA_F-serratus_M_contig1014.227.1|organism=Fucus serratus male|type=CDS|length=2274bp|location=Sequence derived from alignment at F-serratus_M_contig1014:25005..34905- (Fucus serratus male)
ATGCGAGGGTCGAAAGCGTCCCCGCCAAGTAGCTTCAACAGCATCCCGGC
GGAATCATCCAATCCTCGGTGCCGATCACCTTCAATTTCGAGCGACGAAC
TGCTATCTTTAGGCCTAGACGAGATGGCAGAGATAATTGGAGGCTCTGGC
CGGGCGAAGATGGTTTGGACTGCTCTGGCTGAGGGTATTGACCCATTTTC
GAGTCAGGCAGGCTCCGACTACCTTACCCCCAAAACCACGGAGCAGTTGA
ACAAGGCTGTCGAATCCAGTGGTCTACCGTGGCAGATGCGAGGGTCGAAA
GCGTCCCCGCCAAGTAGCTTCAACAGCATCCCGGCGGAATCATCCAATCC
TCGGTGCCGATCACCTTCAATTTCGAGCGACGAACTGCTATCTTTAGGCC
TAGACGAGATGGCAGAGATAATTGGAGGCTCTGGCCGGGCGAAGATGGTT
TGGACTGCTCTGGCTGAGGGTATTGACCCATTTTCGAGTCAGGCAGGCTC
CGACTACCTTACCCCCAAAACCACGGAGCAGTTGAACAAGGCTGTCGAAT
CCAGTGGTCTACCGTGGCAGGTTGTGCGCGAATCGGTTTCCTTGTGCGGG
ACGCGGAAGCTTCTCATCCGATTGGAAGACGGACTCGATGTGGAAACCGT
CATCATTCCGTGTCTAACCGGCTCAAGGTTGTGCGCGAATCGGTTTCCTT
GTGCGGGACGCGGAAGCTTCTCATCCGATTGGAAGACGGACTCGATGTGG
AAACCGTCATCATTCCGTGTCTAACCGGCTCAAGATCCACTGTGTGCGTG
TCAAGCCAAATAGGATGTGCAAAAGGTTGCCAATTCTGTATGACCGGAAA
GATGGGATTCGTCAGAAACCTTACTGCCGGGGAAATCTTGGGCCAAGTGT
TCTTTGCTCGCCAAGCGGTCAGGCTACACCACCTGATCCACTGTGTGCGT
GTCAAGCCAAATAGGATGTGCAAAAGGTTGCCAATTCTGTATGACCGGAA
AGATGGGATTCGTCAGAAACCTTACTGCCGGGGAAATCTTGGGCCAAGTG
TTCTTTGCTCGCCAAGCGGTCAGGCTACACCACCTGCCTCCTCTTTCCAA
CGCGGTGTACATGGGGATGGGAGAGCCGCTCGACAACCCAGTAGCGGTGA
AGCGGTCGTTGGAGCTCTTGACTCATCCGCACGCTTTCGCCATGGCAAGG
AGCAAGGTCTCTGTGTCCACCGTCGGCCCGTCACCAAGCGCGATTCTTCG
GATGAGGGGGATGGCCTGTCGCCTGGCGTGGTCAGTGCACGCAGCCACGG
ACGATGTTCGGCGGTTGCTCGTACCAACTACCTCGCACACAATGGCGGAG
CTGAGCCTCCTCTTTCCAACGCGGTGTACATGGGGATGGGAGAGCCGCTC
GACAACCCAGTAGCGGTGAAGCGGTCGTTGGAGCTCTTGACTCATCCGCA
CGCTTTCGCCATGGCAAGGAGCAAGGTCTCTGTGTCCACCGTCGGCCCGT
CACCAAGCGCGATTCTTCGGATGAGGGGGATGGCCTGTCGCCTGGCGTGG
TCAGTGCACGCAGCCACGGACGATGTTCGGCGGTTGCTCGTACCAACTAC
CTCGCACACAATGGCGGAGCTGAGAGATGCCTTCGGTGAGGTCCTTGAGT
CGAGGAGAAAAGAGCATCTGTTCGTGGAAGTGGTCCTAATTGATGGGGTG
AACGATAGCCCCGATCAAGCCGAAGCGCTCGCAGCGTTGTTAAAACCGCT
CCCGACGCGAGCCAGCGTCAATTTGCTGCCGTACAACGATACGGGACACC
CTGCTTTCCGGGCGTCGTCCAGAGAAGCTGTCAGCAAGTTCCAGAAAATC
TTGACGGAGCATGGATACGTGGCAACGATTCGGACTGCCAGAGATGCCTT
CGGTGAGGTCCTTGAGTCGAGGAGAAAAGAGCATCTGTTCGTGGAAGTGG
TCCTAATTGATGGGGTGAACGATAGCCCCGATCAAGCCGAAGCGCTCGCA
GCGTTGTTAAAACCGCTCCCGACGCGAGCCAGCGTCAATTTGCTGCCGTA
CAACGATACGGGACACCCTGCTTTCCGGGCGTCGTCCAGAGAAGCTGTCA
GCAAGTTCCAGAAAATCTTGACGGAGCATGGATACGTGGCAACGATTCGG
ACTGCCAGGGGGGACAACGAGAGCTCCGCATGCGGGCAATTGGCGACATT
GTTCAAGAATGGACGGGGGGGACAACGAGAGCTCCGCATGCGGGCAATTG
GCGACATTGTTCAAGAATGGACGG
back to top