mRNA_F-serratus_M_contig1013.223.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1013.223.1
Unique NamemRNA_F-serratus_M_contig1013.223.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A1V9ZQM4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQM4_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 8.950e-8
Identity = 47/123 (38.21%), Postives = 60/123 (48.78%), Query Frame = 1
Query:   73 RKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAKADEQVRVDFEDGHTQTMFGDTVTVTTVEGIPDSDDEDAI 441
            +K KV V FD + RK+YLTGF KRK+ RRRFG  M+  K +K  +                      L+S    A  +  A+ K  E V  ++ D HTQ  FG  VTVTT  G   SD ED +
Sbjct:    9 KKSKVIVSFDAEKRKEYLTGFSKRKLERRRFGHDMEAFKKQKALIEARKMRKAEQKKL---------LESLPEVAEVKVVAEDKDTEVV--EYNDEHTQGKFGHAVTVTTTVGELKSDSEDEL 120          
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A024TH86_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TH86_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.730e-7
Identity = 57/164 (34.76%), Postives = 73/164 (44.51%), Query Frame = 1
Query:   58 SKDGGRKPKVEVV--FDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAKADEQVRVDFEDGHTQT------------------------MFGDTVTVTTVEGIPDSDDEDAIEMERLERELL 471
            +K GG KPK ++V  FD D RK+YLTGFHKRK  RRRFG  M+  K +K ++                L    D+          + A    D +V VD++D HTQ                          FGD VTVTT  G   SD ED ++ E  E +LL
Sbjct:    8 AKKGGGKPKSKLVVTFDADKRKEYLTGFHKRKQDRRRFGHDMEAFKKKKAQIEARKIRKAEQKELLASLPEVADV----------KHAATDGDAEV-VDYDDEHTQGPCSFLSSMHLRRRTRPPLGGLGVGKFGDVVTVTTSVGDLKSDSEDELDDE--ENDLL 158          
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A7S1Z7N9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z7N9_TRICV)

HSP 1 Score: 62.4 bits (150), Expect = 1.810e-7
Identity = 28/45 (62.22%), Postives = 37/45 (82.22%), Query Frame = 1
Query:   73 RKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERL 207
            R+ K+E+ FDPDARK+Y+TGF  RK  RR +GLAMQ++KDRK +L
Sbjct:    8 RRRKLEITFDPDARKEYVTGFASRKKERRAYGLAMQKVKDRKAKL 52          
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: K0S5F4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S5F4_THAOC)

HSP 1 Score: 62.0 bits (149), Expect = 2.630e-7
Identity = 42/132 (31.82%), Postives = 65/132 (49.24%), Query Frame = 1
Query:   73 RKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAKADEQVRVD-------------FEDGHTQTMFGDTVTVTTVEGIPDSDD 429
            R  KVE+ F+P+ R+ YLTG   RK  RR FGLAMQ++KDR+ ++               +L   ED++      R  ++ + +A      +             F+D  T++ FG  V+VTT  G+P+ DD
Sbjct:   31 RHRKVEISFNPEDRRGYLTGLSARKKERRAFGLAMQKVKDRQAKIEERKEQRQA------QLEKIEDIERNKKALRRGQDGEVEAGSDAESESKLGXXXXXXXHTFQDDQTRSQFGGLVSVTTTYGMPEDDD 156          
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A7R9WDE2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WDE2_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 4.120e-7
Identity = 70/175 (40.00%), Postives = 88/175 (50.29%), Query Frame = 1
Query:   82 KVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXX---------------------------ELGVQEDLDSFDIKARAREEAKAKAD--------EQVRV-----DFEDGHTQTMFGDTVTVTTVEGIPDSDDEDAIEMERLERELLEEKKR 486
            K+E+ FDP+AR++YLTGF  RK  RR FGLAMQ++KDRK RL   XXXXXXXXXXXX                           E        S D  A   + A+  AD        E+ R       FED  T+  FG +V VTT  G+P SDDED  + +R+ RE   + K+
Sbjct:   16 KLEITFDPNARREYLTGFSSRKRERRAFGLAMQKVKDRKARLKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEANAAVGKSSGDGAAATSDAAEVVADAARAVRNSEESRAASKTDTFEDVVTRDHFGGSVVVTTTFGVP-SDDEDDEDGDRMLRERSHKSKK 189          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1V9ZQM4_9STRA8.950e-838.21Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]
A0A024TH86_9STRA1.730e-734.76Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7S1Z7N9_TRICV1.810e-762.22Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
K0S5F4_THAOC2.630e-731.82Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7R9WDE2_9STRA4.120e-740.00Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1013contigF-serratus_M_contig1013:242993..249897 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score75.5
Seed ortholog evalue4.4e-11
Seed eggNOG ortholog36331.EPrPI00000019071
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Nucleolar protein 12.. Source PGD
EggNOG OGs1MC6P@121069,2CYVS@1,2S6RV@2759
Ec32 ortholog descriptionNucleolar protein 12
Ec32 orthologEc-04_005670.1
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Exons3
Model size1101
Cds size825
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1013.223.1prot_F-serratus_M_contig1013.223.1Fucus serratus malepolypeptideF-serratus_M_contig1013 243035..249663 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928812.9956048-UTR-F-serratus_M_contig1013:242992..2430341622928812.9956048-UTR-F-serratus_M_contig1013:242992..243034Fucus serratus maleUTRF-serratus_M_contig1013 242993..243034 +
1690962583.556882-UTR-F-serratus_M_contig1013:242992..2430341690962583.556882-UTR-F-serratus_M_contig1013:242992..243034Fucus serratus maleUTRF-serratus_M_contig1013 242993..243034 +
1622928813.0893924-UTR-F-serratus_M_contig1013:249663..2498971622928813.0893924-UTR-F-serratus_M_contig1013:249663..249897Fucus serratus maleUTRF-serratus_M_contig1013 249664..249897 +
1690962583.6120589-UTR-F-serratus_M_contig1013:249663..2498971690962583.6120589-UTR-F-serratus_M_contig1013:249663..249897Fucus serratus maleUTRF-serratus_M_contig1013 249664..249897 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928813.012325-CDS-F-serratus_M_contig1013:243034..2431081622928813.012325-CDS-F-serratus_M_contig1013:243034..243108Fucus serratus maleCDSF-serratus_M_contig1013 243035..243108 +
1690962583.5733807-CDS-F-serratus_M_contig1013:243034..2431081690962583.5733807-CDS-F-serratus_M_contig1013:243034..243108Fucus serratus maleCDSF-serratus_M_contig1013 243035..243108 +
1622928813.0319126-CDS-F-serratus_M_contig1013:248527..2486331622928813.0319126-CDS-F-serratus_M_contig1013:248527..248633Fucus serratus maleCDSF-serratus_M_contig1013 248528..248633 +
1690962583.582305-CDS-F-serratus_M_contig1013:248527..2486331690962583.582305-CDS-F-serratus_M_contig1013:248527..248633Fucus serratus maleCDSF-serratus_M_contig1013 248528..248633 +
1622928813.0727174-CDS-F-serratus_M_contig1013:249018..2496631622928813.0727174-CDS-F-serratus_M_contig1013:249018..249663Fucus serratus maleCDSF-serratus_M_contig1013 249019..249663 +
1690962583.5928912-CDS-F-serratus_M_contig1013:249018..2496631690962583.5928912-CDS-F-serratus_M_contig1013:249018..249663Fucus serratus maleCDSF-serratus_M_contig1013 249019..249663 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1013.223.1

>prot_F-serratus_M_contig1013.223.1 ID=prot_F-serratus_M_contig1013.223.1|Name=mRNA_F-serratus_M_contig1013.223.1|organism=Fucus serratus male|type=polypeptide|length=275bp
MGRRISKDGGRKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKD
RKERLEERKERREAFKERREELGVQEDLDSFDIKARAREEAKAKADEQVR
VDFEDGHTQTMFGDTVTVTTVEGIPDSDDEDAIEMERLERELLEEKKRLR
AERVAGKGRGGGGRVYKPGKVGRGVAGSAEGTAEERWSLAAVSKRLAANM
PTKPRKGSTKRGGSSLGAETSLEKGKKKGKKGKKGTAAGAGGIAGAGAAS
ALVDKARGSLPRTELSKGKKRKKR*
back to top

mRNA from alignment at F-serratus_M_contig1013:242993..249897+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1013.223.1 ID=mRNA_F-serratus_M_contig1013.223.1|Name=mRNA_F-serratus_M_contig1013.223.1|organism=Fucus serratus male|type=mRNA|length=6905bp|location=Sequence derived from alignment at F-serratus_M_contig1013:242993..249897+ (Fucus serratus male)
GACAAGACACAGTTTATACTCTTGGAGGCAGACATCCACACGATGGGCCG CAGGATTTCCAAAGATGGTGGAAGGAAGCCAAAAGTGGAGGTTGTCTTCG ATCCCGATGCCAGAAAGTGAGAGTACATCGAGTGCCCAATTTTCTTGATC CTTTCCCTTTCAAAATAGATTTTCTTTACATTTACAGAGTCTTGTACGGA TACTAGCTTGCAGAGTTAATTTCTGGTGAGAGCTTTGTCGATAGCGGCCC CTGCCGTCAGCATCTAAATGTTCCACACACTACAGAGTAGTTTTCTGCTT CTCTCGAAGGTTGGGTCGTTGTATATGTATTCATCGACTGTCGAAGGCGT TAGCGTTTTTTTCTTTTGAAGTGCGCCCGCTGTTGGACTTTCACAACCTC TAGACTGGACACACGGTACTCAATACTAAAACAATTTGGGAATGGCTATT TGCCCCACCGGTGGACCATACCCAAATTTACCCCACCACCTGGATCTCGC GCCAGAAGACACGGTTGGTCACAATACATGCATGAGTGTGTTGGCGCGTT GCAGGGCTATCATGGGGTCATTCGTGCAGCCCAAACGGTCCTGTCTACGT GATGTTACGGCCGGTGGGGTGGTTGGTGTTTTCTGGTATGTAAGGGCAAA TAGCCGTACACATGGCGGAATGGGATTTGCCACGCGGTTTTTACGAATTT TCACCAGAAATTTTGACACGTTATTAAGACCGCTCTTGCGAAGAGGACCA CTTCTGCACATTTTGGTTTTAGTTTTTTTTTCGTAAGCTATGGTATGATA GCCGGATATAAGTAGATGTGGGAATATTTGTTTCGCGACGAAATGATGGA AAAAATAAAAATAAATAAAAATGTGCTGGGGTGGTCCTCTCCGCAAGAGC GGTCTAAATCACGTTTCAAAATTTCAGGTGAAAAATCGTAAAAACCGCGT GGCAAATCGCGATACCCCCACATTTCCTCAGTTCACTTGTGTTTTGTATC GGAATCTTTACGAGGCCGCAACTCTTGATAGAAAACGAGGCGAGCCTTGT AACTACCACCCACGCTCTTGCGGTGCTCCTGGATTCGTGTACACCAAATT TCAGCTTGATCCGTGACACTTTTTTTCATACTGATTTTAGTATAGGAAGT ATCCTCCACTACGCCGCCAATTGGTCATTGTTTACCAAAATCAACTCGGA TTCGAAAAATTCCGGCGCCTGCGCTTCCCTTTTTGCCGTTTAGGAGCAGC CTCCAAATTTCAAGCTTTAACTCGTAGAAACGGCAGAGCGAGACATGAAC GAACAGAAGTCAGTTTCTTGGCCAGCCCAGCCTATAGCAGAAAACACCAA CCACCCCATCGGCCGTGGTAGCACGTAGACAAGATCGTTTGGGCTGCACG ATAGACCCGATAATAGCTAACCCTAACCCTAACACACCCATGTATGTACT GTGACCAACCAAGTCTTCTGGCGCGAGATCCAGGTGGGGGGGTAAACAAG AGAATAGCCCACCGGTGGGCCAAATAGCCATACCCAAACAATTAAGGACT AAATTGCACCAGTAAAGTCGAACCGCTGTACAACAGTTGTATTAGCAATG TCAAAACGTTTAAGGTAGGATCAACATTGGGTCTAGGATCGGATGGGTGT CGATTGCTTAAAGAAAACCTGAACGCATCTAGACCTTCTGAGCATTTCGT TGTTGATTCACACATTCAGCGTATTATTCTTGCAACTGAAAAAACTACGG TGACACAACAAGCCAGCCATAGATAGACCTATCAAATGCCAATCCCGCTC GTGGTCACCCAGAGGAACGAAGGTCAACGGGTTACATCATGATGACAGCC CGCTACTCAAACCAACAGAGATGATCCAAATCGCGACAAAACCCTTGCCA GGTCCAACCACCCGAGAAAATCGGAAACTTATCGGCGTCCATACGATGTA TATGGATACGAATTACAGTCTCTGTTGTCTGGAGTGCTGCCAGTATTTCA GAATCTGACTAACAAGCTACAGATAACACTGTCTGATGTGCTGGCCACCC AATCAAAAGTGATAAAGCAAGTTTTCTAGCTCTTAGTATAGGAGGGTTAC ACGAAAACAAGTTATGCGGCAGTTTACAGGCAATGACACCTGCCAAAGTC AAAACGGTTAACCAAACCTCCATATTCCATATCGAGAGCAACCTCAATCG ACTCGGATTGTAAAGGAAAATCTGAACGCATCTAGACCTTCTGGGCatac tATACTATACTATACTATACCCCAGTCTgGGGGGAAACACGTCAAAACGT TTAGGTGGTATCATAGGCTGCGAAGACAAAATCTCTTTTGGCATTTAATC CAGGGCTTCGCGCGGTACCGACTTTCCGAGCAACGGTGCGGGAAAACGTT CACGTTTGTGTACCGTGGTATGGGAACGGGACGGGAAGGCAGAAGGTTGA CGGGATGGGATCGGAATTAATGATTTCCCGGTGGGACGGGAACGGTCGGG AATTGAAGCGGTCGGAAAACAATCCGGGAAGGAAGATGGAATGAACGTGA GGTGTGTGGTTAAGAAGAAGTGGCCGAGGTCGGGATTGGCACCAGAGCGC GTGACGACGTGTGGCCACCTGATGAAGTACGTCCGAGCCAGCAAGGGAAT GAAGATCAAAAGCGGCGGGACAAGCGGTCTGCTGGCCCACCTCGAGAGCA AACACCCAGCGGAGCACGAAGCAGCTGTCAAGGACAGCAAGCAACCATCG CGCGCTTCGCTTTCCCTTCTGAGGTGTGCCTGCTGTCCTTGACAGCTGCT TTGTGCTCCGCTGGGTGTTTGCTCTCGAGGTGGGCCAGCAGAGGCCGCTT TTCCCACCGCTTTTGATGTTCATTGTTTTGCTGGCTCGGACGTACTTCAT CAGGTGACCACACGTCGTCACGCGCTCTGGTGCCAATCCAGACTTCGGCC ACTTCTTCTTAACCACACACCTCACGCTCATTCCATTTTCCTTCACCTCG GCTGGGCTGAGCTCCCGAACGTGTTTCCACACACCCGATGTGTTCTTGAT TGCGCGACCACATGCCTCTCCCACCGCCGGTTGGATGGGATCACCAGCAG GCGGTGCTTGGGGTGGTGATACTACTACGGGCGAGGAAGCAGAGCCGCCG CCCGCATCGCCCCCAACTTCCATACGCCTTTAGTGCGTTGGGTATTCAAT GTGTGTGTGCGGCTTTGGCTGATGTGGCTGAGCCGTGTGTATGTGTATGT GTGTCTTGTTTTTTTGTTTGTGGCGCGCGCGCATTCCATATCTATCTGCA CTGATTATTTTATTATTTTACACCTGGTTGTATGTGTATATCCACACAGC AGTTGGTACGAATGTTTGATGGGGGAGACTGGGATAAATCATACTCTAGT GGAATATGGGATGGGAAAAATGATTCAACAATCGGGAATGAGATGGTAAG TGAGTGGACAGACAGAGGGAAGTGGGGCGGGAGAAAGAGTGTCAAAGGCG GGAACGGGAGTGGCACGGGAACAGTTCATCTTGCGGTGGGACGGGGAACG CGGGAACAGAAATCAGTAACGGGAGAGGTCGGGAAAGGAAATATCGCAAC GGTTCCTGTTCCCGTTCCCGTACTGTCCCGACCACTTTTCCCGTCCCGCC CTTAATCGCGCGGAGCCCTGATTTAATCGGGTTCCTCAATGGTAGTGACA ATCGATCAACAGCAGTATAATGTCGGATTTGAAAGAAAAATCTGAATGCG CCTAGACCTTCTGAGCATCCCCCAGTCAGGTGGGGTCATAGTGTAGGCTG CAAAAACAAAACCTCCCCATGGCATTTGAACGGGTGCCCCGATGGTAGTA ACATTGGGTCAACAGTATTATGTCGGGGAGAAGCCCACCGTTGTACTGTA CACTTATATTAACCGCCACGCAGGGACACAAAAAAAACTTTAACAAACAA AAAATATTGTAGTACATACCTCAACCAAAACCATCCAAAAACAATGTAGT ACGTAAATCAGATACCAGTAGGTTGTTGTACATAATTTATCAGTGTACAG CAGTACAATACAGTACAGTATCATAGTAATATTAGTGTACAATAATGAGT GTCATAGAACAGAAGGTCTAGGTTTGGTCACAATACACTGTTGTGATCTA ATAGTGTAGTACATAATAAGAACGTTATGGGAATATAGGATTGGCAACAA TGTTACAGTTTCGTTTTACAACTATTAACAGTCATAGTCCATAGGGACTT TATACTAAGTTGTCTACGTGTATTCAGTACGTGTTCAGTACGTGTTTGTA TTTCACTCTTGGCGTTAAATTTGTAACTAAAGGATGATTAATACAGGGCA GTTATTAGTAATGTTGACACCTGCCTACCCACGGCCAGCGTTCTCAGCAA CAAAGCAGACAAATCACGCTCCAATCAGTTTTGATCAACAAGCCCAAGTT CCTCAAGGCCACACATCATACAGAAATTATAAGGAAAATAAAAATACCGA GATCCATGATGGTGGAGGCCTTGAGCTGGTGAAGCCGACGTGCGAGCCAG CATCCAGCCGTCCAAAGCCCTACGAATCTTGCCCGTATCCACCCGATAGA GCACTACCAGGCTCTCCGCGACAGTCCTCCCTGCCTCTCGCTTGCCACCA CCTCCCGAAGGACACCAAATTGGAGCTCGGAAGACGCGCGCACCTGGGAA CACCATCCGCAACCAACCATACCGCCGCCGCGTCTCAACCGATCGGGGCG AGTCGCGAAGACAGCTAGTTGGCTGCATCTCTCGAGGGCGAGCCCGGCCC TACACCCGCCGGAAAGACCCTCCCACACTCATACCCCGGAACCAGGTTTC GGAGGGAGAGGGCACGGTGTTTATACTATAGTGCATATTGTCGTAAACCA AGTCTGACTTTATTCCCTTTCTTGACAGGACATCTGTAGTTCAGACAGTC AGGGGGCTGGAAAAAGAGAGGGCTGGCGCGGGATGGGACAGCCAAACCTG TCTCACTAGACCAGATTCATTCTCAGGGGCAAACGGGGACAAGGGAAATT CATTTTGAAGTTCAGCTGACCGCAAGCAGGATCGGAAACTAGTCCCCAAT CCACCCTATGTTATTATCGCAAGCGCACAGCTTACACACAGCAATAATTG GTAGTGTAAGTTTAATATAATTGGCACGACCAGGGATTCTGCGCGTTTAG ATTTCTACACACAAGTATTGCTCGTAGCAGCTGGTGTAGCTTTTGAATTT TACTGCTCCCCGATTCCTGCAGAACGCAGTGGACCAGTTTCGTTTCATAT CATTTTCCCTCTTGTCGATGAAATTGTGTCCCATGCTGTTCGTTTTCTTC CGTGCAGCTGCCGCGAATTGGACCGACAAACAACCCTGTATCGCAGTGGA ATTGGTTGGGACTCAATAATCGCAAAGGCAACTTAATGTGAACAACACCC CGCCCCCCCCCCCTCCCCTCGTCAGAGAAGATTACGACCTGTCTTTCATG AAGTATTTATATTCGCTTCGATGTACCATCAACAGGGACTACTTGACCGG GTTTCACAAGCGGAAGGTGGCCAGGAGGCGTTTCGGGCTGGCCATGCAGG AGATAAAGGACCGCAAAGAACGCTTGGAGGAGAGAAAGGAGGTGAGGCAC CAAATGCAGTGTCGTGGAGCTAAACGCGTTGGGTGAGAAGGCGTCGTCGA AGTGTCGCGCGCGGCAAGAGTAGCTTTCGTATACCTGTGCGACACCCTGT GCCCGCTTCTCTTGAGGGTTATGGCAGCTACAGCTACAGCACAGAAGCTA TTGTCAGTGCGAGGGATACCTCGAGAAGTGAACAGTACCATGTATCTTGA TGACGAACCTGCGTCTAGGAGACGCGGTAAAATTTTCACTTCGTCTGTTT TGCTTACTCCAAAACGACGAGATGGGAGCGTGTTGATTTATTTTTGCATG TGGTGGCTGAACTCTCAACTGCTTCGCCCCCCACCCTCAAACGGCTGCGC CTCCTGCGCGACGACCCGGGCTTCAGAGACGGGAGGCCTTCAAGGAGAGG AGGGAAGAGCTTGGCGTCCAGGAAGATTTGGATTCGTTCGACATCAAAGC GAGGGCGAGAGAAGAGGCCAAGGCAAAAGCAGATGAACAGGTTCGGGTAG ACTTCGAGGACGGTCACACACAGACCATGTTCGGCGACACCGTCACGGTT ACCACCGTGGAGGGCATTCCTGACAGCGACGACGAAGACGCGATTGAGAT GGAGCGGCTAGAGAGAGAGCTCCTCGAAGAGAAAAAGCGCTTGCGTGCGG AACGGGTTGCTGGGAAGGGGCGCGGCGGCGGCGGAAGGGTTTACAAGCCA GGGAAGGTAGGAAGGGGTGTTGCCGGAAGCGCGGAAGGGACTGCAGAGGA GCGTTGGTCGCTGGCTGCGGTGTCGAAGCGCCTAGCCGCGAACATGCCCA CGAAACCGCGAAAGGGGTCAACGAAGCGAGGTGGCAGCTCGCTCGGGGCG GAGACATCGTTAGAGAAGGGCAAGAAAAAGGGGAAGAAGGGAAAGAAGGG CACGGCGGCGGGGGCGGGCGGTATTGCAGGAGCAGGAGCAGCTTCAGCGT TGGTCGACAAGGCGCGAGGAAGTTTGCCGAGGACGGAGCTGAGTAAGGGC AAGAAGAGGAAGAAACGCTAAACATCGACGGGGAGGGGTTTCCCTTCTGC GGTTGATGTTTTGCTCAGTTTAGTCGTCGCACATATTAAACTAACTGTCT GTGGTTCATATTTTGTTCCATGTATGGAGGTCCCAGTGGTCGATGAGGTT GTTTGTTCAAGCATGAATTGCGAACAAGGGCGAGAGCTTTGTAAGTATTA CGCGAACCTGCCGGCAGCAGAAAGGTGAAGCGTTGAAATAAAATCATAAA AGCCT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1013:242993..249897+

>mRNA_F-serratus_M_contig1013.223.1 ID=mRNA_F-serratus_M_contig1013.223.1|Name=mRNA_F-serratus_M_contig1013.223.1|organism=Fucus serratus male|type=CDS|length=1650bp|location=Sequence derived from alignment at F-serratus_M_contig1013:242993..249897+ (Fucus serratus male)
ATGGGCCGCAGGATTTCCAAAGATGGTGGAAGGAAGCCAAAAGTGGAGGT
TGTCTTCGATCCCGATGCCAGAAAATGGGCCGCAGGATTTCCAAAGATGG
TGGAAGGAAGCCAAAAGTGGAGGTTGTCTTCGATCCCGATGCCAGAAAGG
ACTACTTGACCGGGTTTCACAAGCGGAAGGTGGCCAGGAGGCGTTTCGGG
CTGGCCATGCAGGAGATAAAGGACCGCAAAGAACGCTTGGAGGAGAGAAA
GGAGGGACTACTTGACCGGGTTTCACAAGCGGAAGGTGGCCAGGAGGCGT
TTCGGGCTGGCCATGCAGGAGATAAAGGACCGCAAAGAACGCTTGGAGGA
GAGAAAGGAGAGACGGGAGGCCTTCAAGGAGAGGAGGGAAGAGCTTGGCG
TCCAGGAAGATTTGGATTCGTTCGACATCAAAGCGAGGGCGAGAGAAGAG
GCCAAGGCAAAAGCAGATGAACAGGTTCGGGTAGACTTCGAGGACGGTCA
CACACAGACCATGTTCGGCGACACCGTCACGGTTACCACCGTGGAGGGCA
TTCCTGACAGCGACGACGAAGACGCGATTGAGATGGAGCGGCTAGAGAGA
GAGCTCCTCGAAGAGAAAAAGCGCTTGCGTGCGGAACGGGTTGCTGGGAA
GGGGCGCGGCGGCGGCGGAAGGGTTTACAAGCCAGGGAAGGTAGGAAGGG
GTGTTGCCGGAAGCGCGGAAGGGACTGCAGAGGAGCGTTGGTCGCTGGCT
GCGGTGTCGAAGCGCCTAGCCGCGAACATGCCCACGAAACCGCGAAAGGG
GTCAACGAAGCGAGGTGGCAGCTCGCTCGGGGCGGAGACATCGTTAGAGA
AGGGCAAGAAAAAGGGGAAGAAGGGAAAGAAGGGCACGGCGGCGGGGGCG
GGCGGTATTGCAGGAGCAGGAGCAGCTTCAGCGTTGGTCGACAAGGCGCG
AGGAAGTTTGCCGAGGACGGAGCTGAGTAAGGGCAAGAAGAGGAAGAAAC
GCTAAAGACGGGAGGCCTTCAAGGAGAGGAGGGAAGAGCTTGGCGTCCAG
GAAGATTTGGATTCGTTCGACATCAAAGCGAGGGCGAGAGAAGAGGCCAA
GGCAAAAGCAGATGAACAGGTTCGGGTAGACTTCGAGGACGGTCACACAC
AGACCATGTTCGGCGACACCGTCACGGTTACCACCGTGGAGGGCATTCCT
GACAGCGACGACGAAGACGCGATTGAGATGGAGCGGCTAGAGAGAGAGCT
CCTCGAAGAGAAAAAGCGCTTGCGTGCGGAACGGGTTGCTGGGAAGGGGC
GCGGCGGCGGCGGAAGGGTTTACAAGCCAGGGAAGGTAGGAAGGGGTGTT
GCCGGAAGCGCGGAAGGGACTGCAGAGGAGCGTTGGTCGCTGGCTGCGGT
GTCGAAGCGCCTAGCCGCGAACATGCCCACGAAACCGCGAAAGGGGTCAA
CGAAGCGAGGTGGCAGCTCGCTCGGGGCGGAGACATCGTTAGAGAAGGGC
AAGAAAAAGGGGAAGAAGGGAAAGAAGGGCACGGCGGCGGGGGCGGGCGG
TATTGCAGGAGCAGGAGCAGCTTCAGCGTTGGTCGACAAGGCGCGAGGAA
GTTTGCCGAGGACGGAGCTGAGTAAGGGCAAGAAGAGGAAGAAACGCTAA
back to top