mRNA_F-serratus_M_contig1013.223.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A1V9YL26_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YL26_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 2.440e-10 Identity = 57/144 (39.58%), Postives = 75/144 (52.08%), Query Frame = 1 Query: 73 RKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAKADEQVRVDFEDGHTQTMFGDTVTVTTVEGIPDSDDEDAIEMERLERELLE-EKKRLRAER 501 +K K+ V FD D RKDYLTGF KRK RRRFG M+ K +K + L+S A ++ A+ K D++V + F+D HTQ FG+ VTVTT+ G SD ED + E E+ L KK+ RA R Sbjct: 9 KKSKLVVTFDADKRKDYLTGFSKRKQERRRFGHDMEAFKKQKALIEQRKIRKAEQKKL---------LESLPEVADVKQVAEDK-DKEV-MSFDDAHTQDKFGNVVTVTTMVGDLKSDSEDELSEEENEQLLAHLAKKKERASR 141
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A225X1U8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X1U8_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 4.380e-10 Identity = 59/140 (42.14%), Postives = 73/140 (52.14%), Query Frame = 1 Query: 40 TMGRRISKDGGRKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQED-----LDSFDIKARAREEAKAKADEQVR--VDFEDGHTQTMFGDTVTVTTVEGIPDSDDEDA 438 T G + + +K K+ V FDPD RK+YLTGFHKRK RRRFGL M+ K +K +L XXXXXX L + ED + EE K + V + F D TQ FGD VTVTT G SD +D+ Sbjct: 27 TTGMGANPNLRKKSKLVVTFDPDKRKEYLTGFHKRKQERRRFGLDMEAYKVKKRQLEAKKQRXXXXXXKLAALNLLEDKXXXXXXXXXXXXASDEETKLLDGKSVTKVMTFTDDFTQGKFGDVVTVTTSVGDLQSDSDDS 166
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A485LKQ5_9STRA (Aste57867_22725 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKQ5_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 4.610e-10 Identity = 50/130 (38.46%), Postives = 65/130 (50.00%), Query Frame = 1 Query: 61 KDGGRKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAKADEQVRVDFEDGHTQTMFGDTVTVTTVEGIPDSDDEDAIEME 450 K +K K+ V FD + RKDYLTGFHKRK RRR+G M+ K +K ++ L + +IK A + KA V+F D HTQ FGD VTVTT G SD E+ ++ E Sbjct: 6 KSSNKKNKLVVTFDAEKRKDYLTGFHKRKQDRRRYGHDMEAFKKKKAQIEARKIRKAEQREMLAGLP-----EVANIKPAADPKGKAV------VEFNDEHTQGKFGDVVTVTTSVGELQSDSEEELDDE 124
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A7S2KJM5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KJM5_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 8.360e-10 Identity = 76/186 (40.86%), Postives = 99/186 (53.23%), Query Frame = 1 Query: 37 HTMGRRISKDGGRKP-------KVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIK-------ARAREEAKAKADEQVRV----------DFEDGHTQTMFG----DTVTVTTVEGIPDSDDEDAIEMERLERELLEEKKRLRAERVAG 510 H GRR G+KP K+E+ FDP+ARK+YL GF KRK +R FGLAMQ++KDRK RL XXXXXXXXXXXXXEL + + + + A + K ++DE + D D FG VTVTT G+P++DD + E E R+ E K +A+R AG Sbjct: 22 HMPGRRNKSSKGKKPIAPVRKRKLEIKFDPEARKEYLLGFQKRKQEKRTFGLAMQKLKDRKNRLEEXXXXXXXXXXXXXELELLKKTQRGEXXXXXXXXXSLASDNEKEESDEVITYNRNDAAKAGDDANDERKANFFGVDEQSEVTVTTHFGMPENDDSEN-EYEEEMRKQSERKGVDKAQRWAG 206
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A2P4XC52_9STRA (Nucleolar protein 12 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XC52_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.060e-9 Identity = 59/132 (44.70%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 73 RKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAKADEQVRV----------DFEDGHTQTMFGDTVTVTTVEGIPDSDDEDA 438 +K K+ V FDPD RK+YLTGFHKRK RRRFGL M+ K +K +L XXXXXXXX L + LD + A DE V F D TQ FGD VTVTT G SD +D+ Sbjct: 38 KKSKLVVTFDPDKRKEYLTGFHKRKQERRRFGLDMEAYKVKKRQLEAKKQXXXXXXXXLAALNL---LDDXXXXXXXXXXSDASEDENKPVLGGKSVTKVMTFNDDFTQGKFGDVVTVTTSVGDLQSDSDDS 166
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A0W8DIR9_PHYNI (60S ribosomal protein L44 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DIR9_PHYNI) HSP 1 Score: 69.3 bits (168), Expect = 1.140e-9 Identity = 59/147 (40.14%), Postives = 75/147 (51.02%), Query Frame = 1 Query: 40 TMGRRISKDGGRKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAK--------------AKADEQVRVDFEDGHTQTMFGDTVTVTTVEGIPDSDDEDA 438 T G + + +K K+ V FDPD RK+YLTGFHKRK RRRFGL M+ K +K +L XXXXX L + +D D D + E++ AKA +V F D TQ FGD VTV T G SD +D+ Sbjct: 27 TTGMGANPNKRKKSKLVVTFDPDKRKEYLTGFHKRKQERRRFGLDMEAYKVKKRQLEAKKQRXXXXXERLAALNLLDD-DKKDXXXXSEAESESDGSDNETKLVLGGAKAVTKVET-FNDDFTQGKFGDVVTVMTSVGDLQSDSDDS 171
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: K3WTL5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTL5_GLOUD) HSP 1 Score: 68.6 bits (166), Expect = 1.560e-9 Identity = 52/136 (38.24%), Postives = 63/136 (46.32%), Query Frame = 1 Query: 55 ISKDGGRKP------KVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAKADEQVRV-DFEDGHTQTMFGDTVTVTTVEGIPDSDDEDAI 441 I G RKP K+ V FDP+ RK+YLTGFHKRK RRRFGL M+ K +K++ L + E + +V F+D HTQ FGD VTVTT G SD ED I Sbjct: 31 IGSGGTRKPNPKKKSKLVVTFDPEKRKEYLTGFHKRKQERRRFGLDMEAFKQQKQQ-----------KEKLASLNLLEPXXXXXXXXXXXXXXXXXSKAVTKVMHFDDEHTQNKFGDVVTVTTSIGDLQSDSEDEI 155
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A6G0X6U2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X6U2_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 5.130e-9 Identity = 50/133 (37.59%), Postives = 65/133 (48.87%), Query Frame = 1 Query: 73 RKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAKADEQVRVDFEDGHTQTMFGDTVTVTTVEGIPDSDDEDAIEMERLERELL 471 +K K+ V FD D RK+YLTGFHKRK RRRFG M+ K +K ++ L D+ K + V+F+D HT+ FG+ VTVTT G SD ED ++ E E ELL Sbjct: 11 KKSKLVVTFDADKRKEYLTGFHKRKQERRRFGHDMEAYKKKKAQIEARKIRKAEQKELLASLPEVADV-------------KPVTTGKDVVNFDDKHTKEKFGNVVTVTTSLGELQSDSEDELDDE--ENELL 128
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A0P1AFX9_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFX9_PLAHL) HSP 1 Score: 65.9 bits (159), Expect = 1.140e-8 Identity = 59/137 (43.07%), Postives = 70/137 (51.09%), Query Frame = 1 Query: 73 RKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQED-----------LDSFDIKARAREEAKAKADEQVRVDFEDGHTQTMFGDTVTVTTVEGIPDSDDEDAIEME 450 +K K+ V FDPD RK+YLTGFHKRK RRRFGL M+ K +K +L XXXXXXXXX LD D A+ K + F D TQ FGD VTVTT G S+ +D+ E E Sbjct: 22 KKSKLVVTFDPDKRKEYLTGFHKRKQERRRFGLDMEAYKTKKRQLEIKRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXLDDGDDACSAKAVTKIET-------FNDSFTQGKFGDIVTVTTSVGNLQSESDDSCEEE 151
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: K8Z1J5_NANGC (Rrna processing protein rrp17 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z1J5_NANGC) HSP 1 Score: 62.0 bits (149), Expect = 3.320e-8 Identity = 35/59 (59.32%), Postives = 43/59 (72.88%), Query Frame = 1 Query: 37 HTMGRRISKDGGRKP--KVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERL 207 HT R K GG K K+ +VFDP+AR++YLTGF KRK RR FGLAMQ++K+RK RL Sbjct: 53 HTHARL--KIGGYKKNGKLALVFDPEARREYLTGFSKRKKERRTFGLAMQQVKNRKARL 109 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1013.223.1 >prot_F-serratus_M_contig1013.223.1 ID=prot_F-serratus_M_contig1013.223.1|Name=mRNA_F-serratus_M_contig1013.223.1|organism=Fucus serratus male|type=polypeptide|length=275bp MGRRISKDGGRKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDback to top mRNA from alignment at F-serratus_M_contig1013:242993..249897+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1013.223.1 ID=mRNA_F-serratus_M_contig1013.223.1|Name=mRNA_F-serratus_M_contig1013.223.1|organism=Fucus serratus male|type=mRNA|length=6905bp|location=Sequence derived from alignment at F-serratus_M_contig1013:242993..249897+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1013:242993..249897+ >mRNA_F-serratus_M_contig1013.223.1 ID=mRNA_F-serratus_M_contig1013.223.1|Name=mRNA_F-serratus_M_contig1013.223.1|organism=Fucus serratus male|type=CDS|length=1650bp|location=Sequence derived from alignment at F-serratus_M_contig1013:242993..249897+ (Fucus serratus male)back to top |