mRNA_F-serratus_M_contig1010.208.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1010.208.1 vs. uniprot
Match: A0A7S2HFZ8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HFZ8_9STRA) HSP 1 Score: 220 bits (560), Expect = 3.550e-60 Identity = 115/291 (39.52%), Postives = 168/291 (57.73%), Query Frame = 1 Query: 8254 RFGTGADQRKKGGVSMDNEDKYVHCVEEACQQLESIPAGECGVMIEWIRRPAVENGWGGELQEVLVKCRVGQFPGQKTFFLLVYDDQYQGSLYETWHIVVQARLRMDIHALLGQQSPADLIVRGDRYSRKVRAFSSAPAEVAFKPDSAFQLVPGAYNRLEMRFQPLSI-GSRRIHVHLVDVDSMEIVGAWLATATAMPPVVTKSYEVDLPLGRACHKRIAYSNPWSSARVFRLVSSDPSILRPRYESLEVAGGGTGYFRLWFAALTGINAKKEAFLFVNDIKGQSEECLLI 9123 R G G G+S KYV CV+ G V++++ P G + L ++G FP + F++L+YDD+Y L E WH+ V +RLR DI A LGQ SP +L+VRGD Y R+V+A+SS P E+ F P F L P YN+LE+R+ P G RR+HVHLVD+ + E+V AW+ T A PP +TK Y+VD+ +G HK++++ NPWS R+FRL S+DP+++RP+ + LE+ + +L+ + E +L VND + Q+EEC I Sbjct: 19 RTGGGQSNVDIRGLSDPLGRKYVRCVD----------FGRKNVVVDYRDAP------DGSQELHLKYWKLGAFPFRADFYVLIYDDRYSARLNEIWHVTVASRLRKDIQATLGQASPMELVVRGDGYRRRVKAYSSEPREIKFLPADVFHLAPQQYNKLELRWTPFGTDGMRRVHVHLVDIQTGELVCAWIVTTVATPPAITKDYQVDVAVGEGSHKKVSFDNPWSRHRLFRLRSTDPNVMRPKTDELEIPPRDRAFIKLYISPFLRPGFA-EVYLLVNDEEDQNEECFRI 292
BLAST of mRNA_F-serratus_M_contig1010.208.1 vs. uniprot
Match: A0A3F2RUM1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RUM1_9STRA) HSP 1 Score: 236 bits (602), Expect = 3.590e-58 Identity = 380/1738 (21.86%), Postives = 651/1738 (37.46%), Query Frame = 1 Query: 4585 KLKNIVLKAEGKGISMAETFGVFDKDGSGYITASELEEGLRDLG-VFQDISREQMFSVVRSLKKGPSDGGALDTTPTSEDSCDLLVSAEEFVRFAGGEYEETEAAQAR----LRKVLTTADERGGVTLEDTLGAFDKSGTGRISTADLEDGLRQLGVLDRMSRQQACLATTRFDQSGDGTISLPEVLAFVGKPYTANDRP--------LEAKLRRVLLKAESMGTSMEDAFKHFDKNGCGFITNESFSTGLREM------------GVFEEFSEGEVAEVISHFGADSDGTVSLPKFLCFLGKEYGTVGKSD-RKRGGARGFAER-LRQILTKAHELGTPVPTSFEIFGADEYGRVSARALHRALKDIGQFRWTTLGEVKAFIC------------LLQDDGTNEIRRN------------TTLASSDASSQIVADE------------PGPFLT--LPTLQLFV----------------------------ERGETFLAEKERSVLARQEAGGVIPVENMENPDR---GPSRVAEKKAG-------DEVSRSDYDG-----HKSSRPKREVSQFPDDGNTTTITE------NDKKDVLLEVLRGVLSRAPGTEKSLACGRGGGVRGHLDSFDVDDDGILTTREFVTALRSLGAKGE---------------------------------NFNGWRTIDHLVSQFRDDSESSGRCVDGVSIVKVTKWFNGKAEDESSGNKTSHRLGSTGDKNGAASLKGQGHRD-----------IGKVSHVARAEEHVP--------------GEA-------LRRAVWLAEAKGMTLERTFARLDEDGDGFITLRQLLRGLDNLGVFKQARNASTTYPRMARYFATRDDVLDVLDVLDDNHCTSRPIQEKGHEESKTGRGDDPHGVDLVGFIRLMRQRPTCTVGEEAEICDDVFDGGEGKQEDGERSTYKFSLDPETRAAEKKLRRVVAKQVIHQLGVDVEGIFQRY-DPEQTGSILRSDFVQAVMELGVGVLETCRHDNRFD-YAPGRV--------DPARSRHVQQLARAKGPVEG-------RVVRMRQTRRSLFQREVGKEEKGADDQEEDCAPFE-EGDESLALIQWYREGQKKTMMRHILATSLTTEYNLFFSFASPLFFEHPLRNPFNHEERFRIEL---DDHQ------LRVVTAATEWEYLRRQGAPAHATPCIGDIGDTP-VETEFFDVDPQNGVHITLMAHEVVFIPFAFLSLEPRHPTPQPPESLHKSQFSERRSAAVADGQSSKPQEGGATAVERSVVVSFVSSSHGHIVSVIQVHLHRRPFVINRTFRFYQNEGEILKRIQRYSRGDASNGNALALWVIPSRFVSLSFHKGIRWQRSVRPFSTRVISHKQSPLVCLKSFKYRSIRLSLGGNPGPPLHKTGTSSRFGTGADQRKKGGVSMDNEDKYVHCVEEACQQLESIPAGECGVMIEWIRRPAVENGWGGELQEVLVKCRVGQFPGQKTFFLLVYDDQYQGSLYETWHIVVQARLRMDIHALLGQQSPADLIVRGD------------RYSRKVRAFSSA--PAEVAFKPDSAFQLVPGAYNRLEMRFQPLS--IGSRRIH-VHLVDVDSMEIVGAWLATATAMPPVVTKSYEVDLPLGRACHKRIAYSNPWSSARVFRLVSSDPSILRPRYESLEVAGGGTGYFRLWFAALTGINAKKE-AFLFVNDIK-GQSEECLL 9120 +LK ++ A +++ + F +FD + G+++ E + +R LG VF D+S + + L DT + + EF +F + + T ++A +++++ A E+G + + D SG G++S + E GL +LG+ +Q T D+ DG IS E L + N R + +R++L + + G S E+ F HFD + G ++ + F+ L ++ + F V + D D + +FL G V K AR ER L +++ +A G V FE F ++ G +S ++ + + T+ + +D NE+++ + +++ D SS++ + P F T +P L F + G+ A++ +++L + + GV ++ + D G E K G +++ D+D + K + +F N T + NDK + L ++ + + + A FD D DG + EF+TA+ LGA GE F+ D L D ++SG ++ + GK+ + R T + +A ++G+ V RAE GEA L++ + A +G+ ++++F D+ G G ++ GL +LG A AS T DD+ + + LD ++ K R +D FI M + +E D + G R KF E R + G R ++ G +LR +F+Q +MELG +L DN+ D A G + D +R +++L+R + ++ ++VR + QR + +G E+ FE E + L ++ +YR+G KK ++ +L +TT LF SF +FFE P NP+NH +RFRIEL + L +V + EW + R A+ G + T VE E D + + + AH+ + IP L+ + + + + ++ +S + A+ SVV+ S SHGH ++ + L +PF +R RF I + RY RG +FV VC+ S+ + L N G D+ G++ +CRVG++P +TFF+++YDD+Y +YE W I +Q++LR+D+HA+LGQ +L+++GD R V+ F+ + + F+P F LVP A+NR+E F + +G++ + V+LVD+++ E+VGAW T PV++K+YE+ LP+ RA K+I+Y+NPW + L SS P +L P+ L++ G + RL FAA A E +LF+ND + QSEECLL Sbjct: 1023 RLKRVLTIATKNQVALIDAFSLFDTNKDGFLSREEFVQAMRSLGTVFADLSDADLGLLADFL----------DTXXXXK------IEYREFDQFLTKDKQRTGMSRAEWRDHIKRIVVRAMEKG-IHVHHVFAKLDASGDGKLSLEEFEQGLYELGISPDSDKQGVRELLTELDKDRDGMISYKEFLESLDISVEENKREVVRETAKDIREDVRKILERLTAKGISFEEVFVHFDTDRNGTLSVDEFTKALNQVLRLDSKGGEDGHDTLKAFERDAVEVFVKSINTDGDSKIDYREFLIACGVAITEVQKEAVHFHQAARDKTERKLIKLIVRACAGGLSVHEVFEQFDSNSDGNISLAEFQSTIEKLFLSQGLTVDDAALVASRXXXXXXXXXXXXXXEDFGNELQKKQQSLIALLIPHLSKISALDQSSKLAGKKWALFCRKELGITPRTFSTEVMPLLSFFGFEDKEGSVDVQELCALCKTVQSSKVSTRKSGKESAAKQLQTLLIKAKEQGVDLKKSFAHFDSNGDGEISQGELKRGLLALGCFEDMREEDFDTLLEQLDEDGSGKIDFREFRALMNETEVNSAGAPSVNDKMNKLKALMEKAVEKGVSIDDCFA------------HFDKDGDGNIKKEEFMTAMTELGA-GEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLPGFDAVSDDDILAIVKEIDKDNSG--------MRTASFGKGKSPGTAVAGAPFRRT-KTDSEAISAEVEGEEQESEKRKMPPQRVSFAAARAVKRAEATAATTTPEDNSTEISALGEAVSGGLSKLKKLLLTATDRGVAIQQSFNHFDKAGKGTLSYEGFKNGLRDLG----ADFASLT----------DDDIAAMANSLD-------------KKQQKEIRVED--------FISFMEE----ATSKEVSTALDAYQRGVLPL----RVVAKFLEGDEDRRGR------------------IPGDSGRERSRKKKGELLRVEFLQVLMELGFTLLSD--QDNQDDDEASGGLPRPMTRMNDHLYARQLERLSRYRQHIKSDETKAHKQLVRAVAKSKQHLQRGKLQITRG----EDSLRRFEDEKTQLLRVLSYYRDGHKKALVYSLLREQVTTSLTLFPSFGELMFFELPFVNPYNHNDRFRIELLLPSSREIAVVLDLEIVRNSDEWTFYRENLPLAY-----GFLNKTTEVENEMIDDQDE----VVMDAHDQLHIPLRLRWLDTSN-------NFTRYESTDAKSKTKS-------------AIPLSVVIK--SCSHGHTAALFNIELLPQPFPCHRVLRFSHPAASIWRWKLRYPRG---------------KFV-----------------------------VCMDP----SVAMELLRN----------------GQDETNSSGLAS-------------------------------------------------FRCRVGEYPALETFFVVLYDDKYYARVYEVWQIRIQSKLRVDVHAVLGQSMRHELVIKGDGGAPSRQGAVSGESKRHVKCFTPVLHRSIIQFRPAQVFSLVPQAFNRIEFAFCAVEADVGNQMVVLVNLVDIETHELVGAWSVHVTLALPVISKTYELRLPVDRAAQKKISYANPWDQPQTIVLHSSAPRLLVPKEPVLQLPSNGQAFLRLAFAARPQSTAASEDIYLFINDKRTDQSEECLL 2510
BLAST of mRNA_F-serratus_M_contig1010.208.1 vs. uniprot
Match: G5A7A4_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A7A4_PHYSP) HSP 1 Score: 229 bits (585), Expect = 2.930e-56 Identity = 214/780 (27.44%), Postives = 336/780 (43.08%), Query Frame = 1 Query: 6928 TYKFSLDPETRAAEKKLR--------------RVVAK--QVIHQLGVDVEGIFQRYDPEQTGSILRSDFVQAVMELGVGVLETCRHDNRFDYAPGRV--------DPARSRHVQQLARAKGPVEGRVVRMRQTRRSLFQREVGKEEKGADDQEEDCAPF-EEGDESLALIQWYREGQKKTMMRHILATSLTTEYNLFFSFASPLFFEHPLRNPFNHEERFRIEL---DDHQ------LRVVTAATEWEYLRRQGAPAHATPCIGDIGDTPVETEFFDVDPQNGVHITLMAHEVVFIPFAFLSLEPRHPTPQPPESLHKSQFSERRSAAVADGQSSKPQEGGATAVERSVVVSFVSSSHGHIVSVIQVHLHRRPFVINRTFRFYQNEGEILKRIQRYSRGDASNGNALALWVIPSRFVSLSFHKGIRWQRSVRPFSTRVISHKQSPLVCLKSFKYRSIRLSLGGNPGPPLHKTGTSSRFGTGADQRKKGGVSMDNEDKYVHCVEEACQQLESIPAGECGVMIEWIRRPAVENGWGGELQEVLVKCRVGQFPGQKTFFLLVYDDQYQGSLYETWHIVVQARLRMDIHALLGQQSPADLIVRGDR--------YSRKVRAFSSAPAE--VAFKPDSAFQLVPGAYNRLEMRFQPLSIGSRR---IHVHLVDVDSMEIVGAWLATATAMPPVVTKSYEVDLPLGRACHKRIAYSNPWSSARVFRLVSSDPSILRPRYESLEVAGGGTGYFRLWFAALT-GINAKKEAFLFVNDIK-GQSEECLL 9120 +Y FS +PE RA E KLR RVVAK + V G +R +++ +LR +F+Q +MELG +L D+ A G + D +R +++LAR + V+ + + + +++G E+ F EE ++ L ++ +YR+G KK+++ +L +TT LF SF LFFE P NP+NH +RFRIEL + L +V ++ EW + R A+ VE E D + + + +H+ + IP L+ S + Q ++P + +T + SVV+ S SHGH V++ + L +PF +R RF I + RY RG +FV VC+ S+ + L +G D+ G+ V KCRVG++P +TFF+++YDD+Y ++E W I +Q++LR+D+HA+LGQ +L+++GD R+V F+ V F+P F LVP A+NR+E F + + + V+LVDVD+ E+VGAW T P++TK+YE+ LP+GRA K+I+YSNPW + L SS P++L PR L++ G + RL F A A ++ +LF+ND + Q+EECLL Sbjct: 1428 SYTFSSNPEIRAVELKLRQTALDAYQRGILPLRVVAKFLEDADDRRGRVPGGRERSSKKRS-ELLRVEFLQVLMELGFTLLSDQSEDDVEAGAGGGMVKPVTKMNDHLYARQLERLARYRQHVKSDEAKAHKQLVRAVSKTKQYQQRGRQQGEDSLRRFQEEKNQLLRVLSYYRDGHKKSLVYSLLRQQVTTSLTLFPSFGDLLFFELPFVNPYNHNDRFRIELLLPSSREIAVVLDLEIVRSSEEWAFYRENLPLAYGFAA----SSAEVEEEMIDDHDE----VVMDSHDQLHIPMRLRWLD--------------------TSDSFTRVQKTEPGKKKST-IPVSVVIK--SCSHGHTVALFNMELQPQPFACHRVLRFSHPALSIWRWKLRYPRG---------------KFV-----------------------------VCMDP----SVAMEL----------------LRSGEDEANNSGL-------------------------------------------------VSFKCRVGEYPALETFFVVLYDDKYYARVFEVWQIRIQSKLRVDVHAVLGQSVRHELVIKGDGGLSTQDAGAKRRVMCFTPMQHHSLVQFRPGHVFALVPQAFNRIEFAFCAVENAAATHLVVLVNLVDVDTHELVGAWSVHVTLALPIITKTYELRLPVGRAAQKKISYSNPWDQPQTIMLRSSAPTLLVPREPVLQLPSNGQAFLRLAFVARDYSAAAAEDIYLFINDKRTDQNEECLL 2062
BLAST of mRNA_F-serratus_M_contig1010.208.1 vs. uniprot
Match: A0A7S3XTW6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTW6_HETAK) HSP 1 Score: 189 bits (481), Expect = 1.090e-49 Identity = 110/234 (47.01%), Postives = 141/234 (60.26%), Query Frame = 1 Query: 7303 DDQEEDCAPFEEGDESLALIQWYREGQKKTMMRHILATSLTTEYNLFFSFASPLFFEHPLRNPFNHEERFRIELDDHQLRVVTAATEWEYLRRQGAPAHATPCIGDI-GDTPVETEFFDVDPQNGVHITLMAHEVVFIPFAFLSLEPRHPTPQPPESLHKSQFSERRSAAVADGQSSKPQEGGATAVERSVVVSFVSSSHGHIVSVIQVHLHRRPFVINRTFRFYQNEGEILKR 8001 DD EE A + E ESL +I+WYREGQKK +++ IL SLTTEY+++ F L+FEHP+ NP HEERFRIELDD +LR+VTA EW LRR PA +G++ + VE + DVDP +G TL A E V +PF FLSL G PQ R+V +SFVS+SHGHIVS++QVH+H RPF ++R+ RFYQ+EGEI+KR Sbjct: 43 DDSEE--ARYTEQMESLQMIKWYREGQKKDLVQQILTNSLTTEYHIYPRFGQTLWFEHPVTNPLGHEERFRIELDDPELRLVTAGPEWAALRRALPPA-----VGEVEAGSGVEDDMIDVDPVHGFQTTLAARERVLVPFKFLSLN------------------------AGRGDKGLPQG-------RTVAISFVSASHGHIVSLLQVHIHPRPFCVDRSIRFYQHEGEIMKR 238
BLAST of mRNA_F-serratus_M_contig1010.208.1 vs. uniprot
Match: A0A2P4XPK6_9STRA (Nephrocystin-4-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPK6_9STRA) HSP 1 Score: 185 bits (469), Expect = 2.130e-48 Identity = 102/237 (43.04%), Postives = 144/237 (60.76%), Query Frame = 1 Query: 8452 KCRVGQFPGQKTFFLLVYDDQYQGSLYETWHIVVQARLRMDIHALLGQQSPADLIVRGDRYSR-----KVRAFSSAPAE----VAFKPDSAFQLVPGAYNRLEMRFQPLSIGSRR---IHVHLVDVDSMEIVGAWLATATAMPPVVTKSYEVDLPLGRACHKRIAYSNPWSSARVFRLVSSDPSILRPRYESLEVAGGGTGYFRLWFAALTGINAKKEA-FLFVNDIK-GQSEECLL 9120 KCRVG++P +TFF+++YDD+Y +YE W I +Q++LR+DIHA+LGQ +L+++GD SR K P + V F+P F LVP A+NR+E F + G + V+LVDV++ E+VGAW T P++TK+YE+ LPLGRA K+I+YSNPW + L SS P +L PR L++ G + RL FAA A E +LF+ND + Q+EECLL Sbjct: 26 KCRVGEYPALETFFVVLYDDKYYARVYEVWQIRIQSKLRVDIHAVLGQSVRHELVIKGDGGSRDGEASKRHVMCFTPTQHRGLVQFRPAQVFALVPQAFNRIEFAFCAVENGPGSQVVVLVNLVDVETHELVGAWSIHMTLALPIITKTYELRLPLGRAAQKKISYSNPWDQPQTIMLRSSAPKLLVPREPVLQLPSNGQTFLRLAFAARNQSTATCEGVYLFINDKRTDQNEECLL 262 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1010.208.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1010.208.1 >prot_F-serratus_M_contig1010.208.1 ID=prot_F-serratus_M_contig1010.208.1|Name=mRNA_F-serratus_M_contig1010.208.1|organism=Fucus serratus male|type=polypeptide|length=1670bp MRREGVRVSLPALMEWAGRDPLSAAGVENEARKKILSAEAATKRKGYTVSback to top mRNA from alignment at F-serratus_M_contig1010:203549..231650- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1010.208.1 ID=mRNA_F-serratus_M_contig1010.208.1|Name=mRNA_F-serratus_M_contig1010.208.1|organism=Fucus serratus male|type=mRNA|length=28102bp|location=Sequence derived from alignment at F-serratus_M_contig1010:203549..231650- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1010:203549..231650- >mRNA_F-serratus_M_contig1010.208.1 ID=mRNA_F-serratus_M_contig1010.208.1|Name=mRNA_F-serratus_M_contig1010.208.1|organism=Fucus serratus male|type=CDS|length=10020bp|location=Sequence derived from alignment at F-serratus_M_contig1010:203549..231650- (Fucus serratus male)back to top |