mRNA_F-serratus_M_contig101.204.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig101.204.1
Unique NamemRNA_F-serratus_M_contig101.204.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig101.204.1 vs. uniprot
Match: W2KIJ3_PHYPR (Uncharacterized protein n=15 Tax=Peronosporaceae TaxID=4777 RepID=W2KIJ3_PHYPR)

HSP 1 Score: 212 bits (539), Expect = 1.050e-59
Identity = 111/232 (47.84%), Postives = 152/232 (65.52%), Query Frame = 1 
Query:  148 DIAAGLASSFLVSPSVTILDRAISMNASGAMKTGDSIREGVKEMILRPHVFHCRPEFLMIWGVYAATYVTANMIMTTCARNDVEDTWPKFIGTTFVNITTVVAKDLAFTRMFATVKPRPMPIATYLLFTARDGMTVAASFNMPTPASKYLQERFGMSEKNADVFAQLACPASVQLLSTPLNLLGMDLYNNPASSMATRAKFIVREYNSAMILRVARTGPAFGIGGVGNTAFR 843
            D AA +A+S  V+P +TI+DRAI  NASGA   G  ++E   + +  P  F  + EF +I+G+Y ATYVTAN++ + C   + ++  PKFIGTT VN++  +AKD AF RMF  + P   P+ +  LF  RD MT  ASFN P   +K ++++  M +  A  FAQL CPA+VQ +STPL+LLG+DLYNN   +M+ R  FI REY  +++ R+ R GPAFGIGGVGN  FR
Sbjct:   23 DTAAAMAASLGVAPFITIVDRAIIENASGARPLGRGLKELSADFLKHPLRFVGKREFHLIFGLYTATYVTANVVDSVCEYGETDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDKGLMEKSGASTFAQLVCPAAVQFVSTPLHLLGLDLYNNKGHAMSQRVGFIRREYVKSVLARIGRIGPAFGIGGVGNAYFR 254
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BLAST of mRNA_F-serratus_M_contig101.204.1 vs. uniprot
Match: A0A8H7U8D9_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7U8D9_MORIS)

HSP 1 Score: 210 bits (534), Expect = 9.200e-59
Identity = 115/251 (45.82%), Postives = 158/251 (62.95%), Query Frame = 1 
Query:  109 SQKQVSIYSLYAADIAAGLASSFLVSPSVTILDRAISMNASGAMKTGDSIREGVKEMILRPHVFHCRPEFLMIWGVYAATYVTANMIMTTCA---RNDVEDTWPKFIGTTFVNITTVVAKDLAFTRMFATVKPRPMPIATYLLFTARDGMTVAASFNMPTPASKYLQ-ERFGMSEKNADVFAQLACPASVQLLSTPLNLLGMDLYNNPASSMATRAKFIVREYNSAMILRVARTGPAFGIGGVGNTAFRKY 849
            S+   ++  L++ D+AA  +SSF VSP + I+DR+I  N +G       +++G    +  PH F    +F +++ +Y +TY+TAN+I TT     R   E    KF+GTT VN+T  + KD AFTRMF TV  +P+P+ +YLLF +RD +T+ +SFN P   SKY+Q E    S K +D  AQLACPA +Q +STPL+LLG+DLYNN  SS   R   I REY  +++ RVAR  PAFGIGGVGN   R Y
Sbjct:   21 SKSLTTLVKLFSIDMAAAASSSFAVSPMIAIVDRSIIENTNGKTPLVQGLKQGFAAFVASPHRFITTRQFRLVFAIYFSTYMTANVIDTTSEFYQREPTETAAAKFVGTTAVNMTACIIKDRAFTRMFGTVASKPLPLFSYLLFASRDSLTILSSFNAPPIVSKYIQTEGILNSSKMSDTIAQLACPAVMQFISTPLHLLGLDLYNNSNSSSGQRLSLIRREYVKSVLARVARIAPAFGIGGVGNNYVRSY 271
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BLAST of mRNA_F-serratus_M_contig101.204.1 vs. uniprot
Match: A0A3M6VQY3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQY3_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.520e-58
Identity = 111/235 (47.23%), Postives = 150/235 (63.83%), Query Frame = 1 
Query:  148 DIAAGLASSFLVSPSVTILDRAISMNASGAMKTGDSIREGVKEMILRPHVFHCRPEFLMIWGVYAATYVTANMIMTTCARNDVEDTWPKFIGTTFVNITTVVAKDLAFTRMFATVKPRPMPIATYLLFTARDGMTVAASFNMPTPASKYLQERFGMSEKNADVFAQLACPASVQLLSTPLNLLGMDLYNNPASSMATRAKFIVREYNSAMILRVARTGPAFGIGGVGNTAFRKYF 852
            D AA +A+S  V+P +TI+DRAI  NASGA   G  I+E     +  P  F  + EF +++G+Y ATY+ AN + + C   + ++  PKFIGTT VN++  +AKD AF RMF  + P   P+A+  LF  RD MT AASFN P   +K +++   M + NA  FAQL CPA+VQ +STPL+LLG+DLYNN   +M   A  + REY  +++ RV R GPAFG+GGVGN  FR  F
Sbjct:   24 DTAAAMAASLGVAPFITIVDRAIIENASGARPLGRGIKELSISFLKNPLRFVGKREFHIVFGLYTATYMAANAVDSVCEYIETDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLASIGLFAVRDSMTCAASFNAPKVLAKKIEDNKLMDKSNAGTFAQLICPAAVQFISTPLHLLGLDLYNNKGHTMTQHASLVRREYVKSVLARVGRIGPAFGVGGVGNAYFRNIF 258
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BLAST of mRNA_F-serratus_M_contig101.204.1 vs. uniprot
Match: A0A8H7S7R9_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S7R9_9FUNG)

HSP 1 Score: 208 bits (530), Expect = 1.810e-58
Identity = 112/244 (45.90%), Postives = 153/244 (62.70%), Query Frame = 1 
Query:  127 IYSLYAADIAAGLASSFLVSPSVTILDRAISMNASGAMKTGDSIREGVKEMILRPHVFHCRPEFLMIWGVYAATYVTANMIMTTCARNDVEDT---WPKFIGTTFVNITTVVAKDLAFTRMFATVKPRPMPIATYLLFTARDGMTVAASFNMPTPASKYLQERFGMSEKNADVFAQLACPASVQLLSTPLNLLGMDLYNNPASSMATRAKFIVREYNSAMILRVARTGPAFGIGGVGNTAFRKY 849
            ++ LY  D AA   SS +VSP + ++DRAI  N +G    G  I +G K +I RP  F    +F +++G+Y  TY+TAN++ T   +  +  T   W KFI T+ +N+   + KD  FTRMF     R +P  TYL F ARD MTVAASFN PT  + +LQE + M ++N+ V AQLACPA +Q +STP++LLG+DLYN P ++   R   I +EY  + + RV R GPAFGIGGVGNT FR +
Sbjct:   11 LWKLYGIDFAAAATSSAMVSPFIAVVDRAIIENVNGKTPLGKGIVQGFKTIITRPLQFAGSTQFRLVFGLYFGTYLTANVVDTANEQLGITGTTAAWYKFIATSVMNMGVCIYKDRTFTRMFGVTTTRALPKFTYLCFAARDSMTVAASFNAPTYFASWLQENYSMDQRNSKVTAQLACPALIQFISTPIHLLGLDLYNRPNATSNQRVGLIRKEYFKSALARVGRIGPAFGIGGVGNTYFRGF 254
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BLAST of mRNA_F-serratus_M_contig101.204.1 vs. uniprot
Match: A0A397IN71_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397IN71_9GLOM)

HSP 1 Score: 208 bits (530), Expect = 4.500e-58
Identity = 111/234 (47.44%), Postives = 151/234 (64.53%), Query Frame = 1 
Query:  148 DIAAGLASSFLVSPSVTILDRAISMNASGAMKTGDSIREGVKEMILRPHVFHCRPEFLMIWGVYAATYVTANMIMTTCARNDVEDTWPKFIGTTFVNITTVVAKDLAFTRMFATVKPRPMPIATYLLFTARDGMTVAASFNMPTPASKYLQER-FGMSEKNADVFAQLACPASVQLLSTPLNLLGMDLYNNPASSMATRAKFIVREYNSAMILRVARTGPAFGIGGVGNTAFRK 846
            DI A   ++F VSP + I+DR+I  NASG  K G ++++G   +  RP  F   P F +++GVYAATY TAN I T CA    ++  PKF+GTT  N+TT + KD AFTRMF  V P+ +P ++Y  F ARD +T+AASFN+P   +K  Q+R   +  + +   AQL CPA+VQ +S  L+LLG+D+YN P  SM +R +F+ R Y    I R+AR GPAFGIGGVGN   R+
Sbjct:   17 DIFAASTAAFGVSPFIAIVDRSIIENASGREKLGKALKQGFIHLFTRPFNFIRSPSFFLVFGVYAATYSTANTIDTICAYTKQDNQTPKFLGTTIANMTTCIYKDRAFTRMFGLVAPKGLPWSSYGYFAARDALTIAASFNIPPTLAKEFQDRKIILDSETSQNVAQLICPAAVQFISCALHLLGLDIYNRPGESMLSRLQFLQRTYLKTTITRIARIGPAFGIGGVGNRVIRE 250
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BLAST of mRNA_F-serratus_M_contig101.204.1 vs. uniprot
Match: A0A015K7Y8_RHIIW (Uncharacterized protein n=8 Tax=Rhizophagus TaxID=1129544 RepID=A0A015K7Y8_RHIIW)

HSP 1 Score: 207 bits (528), Expect = 4.600e-58
Identity = 110/245 (44.90%), Postives = 158/245 (64.49%), Query Frame = 1 
Query:  100 VDASQKQVSIYSLYAADIAAGLASSFLVSPSVTILDRAISMNASGAMKTGDSIREGVKEMILRPHVFHCRPEFLMIWGVYAATYVTANMIMTTCARNDVEDTWPKFIGTTFVNITTVVAKDLAFTRMFATVKPRPMPIATYLLFTARDGMTVAASFNMP-TPASKYLQERFGMSEKNADVFAQLACPASVQLLSTPLNLLGMDLYNNPASSMATRAKFIVREYNSAMILRVARTGPAFGIGGVGN 831
            VD   K++  +     D+ A  ++SF+VSP +TI+DR+I  N SG  K G +++ G   ++ RPH     P FL+++GVY +TY TAN I T C R + +   PKF+GTT  N+TT + KD AFTRMF  V P+ +P+A+Y +F ARD +T+ ASFNMP T A+++ +    ++++ A   AQ+ CPA VQL+S PL+L G+D YN P  S A+RA FI + Y    + R+ R  PAFGIGG+GN
Sbjct:    2 VDTKNKEL-FFKKLGVDLIAAASASFMVSPFITIVDRSIIENTSGRNKLGTALKNGFINLLTRPHRLIRAPSFLLVFGVYFSTYATANTIDTICERLEKDSQTPKFLGTTIANMTTCIFKDRAFTRMFGMVAPKGLPLASYGMFVARDALTIGASFNMPDTVAAEFQKRGLILNDEKAINAAQILCPAVVQLVSCPLHLFGLDYYNRPHVSFASRAGFISKLYIKTTLTRIVRIAPAFGIGGIGN 245
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BLAST of mRNA_F-serratus_M_contig101.204.1 vs. uniprot
Match: A0A484DVU1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVU1_BRELC)

HSP 1 Score: 206 bits (524), Expect = 1.340e-57
Identity = 111/233 (47.64%), Postives = 149/233 (63.95%), Query Frame = 1 
Query:  145 ADIAAGLASSFLVSPSVTILDRAISMNASGAMKTGDSIREGVKEMILRPHVFHCRPEFLMIWGVYAATYVTANMIMTTCARNDVEDTWPKFIGTTFVNITTVVAKDLAFTRMFATVKPRPMPIATYLLFTARDGMTVAASFNMPTPASKYLQERFGMSEKNADVFAQLACPASVQLLSTPLNLLGMDLYNNPASSMATRAKFIVREYNSAMILRVARTGPAFGIGGVGNTAFR 843
            AD AA  A+S  V+P +TI+DRAI  NASGA      ++E   E +  P  F  + EF +I+G+Y ATYVTAN++ + C   + ++  PKF G T VN++  +AKD AF RMF  + P   P+A+  LF  RD +T  ASFN P   +K ++E+  M    A+ FAQL CPA+VQ +STPL+LLG+DLYNN   ++  R  FI REY  +++ RV R GPAFGIGGVGN  FR
Sbjct:   19 ADTAAATAASLGVAPFITIVDRAIIENASGARALSRGLKELSVEFLKHPLRFVGKREFHLIFGLYTATYVTANVVDSVCEYAETDNQMPKFFGVTAVNMSLCIAKDRAFARMFGVIAPGAFPLASIGLFAIRDSLTCGASFNAPKVLAKTIEEKGLMERSGANTFAQLLCPAAVQFVSTPLHLLGLDLYNNKGHAIGRRVNFIQREYVKSVLARVGRIGPAFGIGGVGNNYFR 251
[Close]
BLAST of mRNA_F-serratus_M_contig101.204.1 vs. uniprot
Match: A0A2D4BK36_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK36_PYTIN)

HSP 1 Score: 204 bits (518), Expect = 1.120e-56
Identity = 109/233 (46.78%), Postives = 147/233 (63.09%), Query Frame = 1 
Query:  148 DIAAGLASSFLVSPSVTILDRAISMNASGAMKTGDSIREGVKEMILRPHVFHCRPEFLMIWGVYAATYVTANMIMTTCARNDVEDTWPKFIGTTFVNITTVVAKDLAFTRMFATVKPRPMPIATYLLFTARDGMTVAASFNMPTPASKYLQERFGMSEKNADVFAQLACPASVQLLSTPLNLLGMDLYNNPASSMATRAKFIVREYNSAMILRVARTGPAFGIGGVGNTAFRK 846
            D AA + +S  VSP +TI+DR+I  NASGA +    ++E   + +  P  F  R EF +++G+Y ATY +AN I T C   D     PKF+GTT VN+T  +AKD AFT+MF  + P   P+A+  LF  RD +TVAASFN P   +K L+ER  +    A   AQL CPA VQ +STPL+LLG+DLYN+  + +  R  F+ REY  + + R+ R GPAFG+GGVGNT  R+
Sbjct:   24 DAAAAMIASLGVSPFITIVDRSIIENASGARQLTTGLKELSIDFLRHPLQFLRRREFRLVFGLYTATYASANAIDTLCDVTDTNSQMPKFVGTTAVNMTLCIAKDRAFTQMFGVIAPAAFPLASIGLFAVRDALTVAASFNAPRVVAKELRERAQLEPSRASTVAQLLCPAVVQFVSTPLHLLGLDLYNHRTAMVRQRINFVQREYLKSAVARIGRIGPAFGVGGVGNTFCRE 256
[Close]
BLAST of mRNA_F-serratus_M_contig101.204.1 vs. uniprot
Match: H6S466_PLAVT (Uncharacterized protein (Fragment) n=1 Tax=Plasmopara viticola TaxID=143451 RepID=H6S466_PLAVT)

HSP 1 Score: 202 bits (515), Expect = 1.190e-56
Identity = 108/223 (48.43%), Postives = 146/223 (65.47%), Query Frame = 1 
Query:  175 FLVSPSVTILDRAISMNASGAMKTGDSIREGVKEMILRPHVFHCRPEFLMIWGVYAATYVTANMIMTTCARNDVEDTWPKFIGTTFVNITTVVAKDLAFTRMFATVKPRPMPIATYLLFTARDGMTVAASFNMPTPASKYLQERFGMSEKNADVFAQLACPASVQLLSTPLNLLGMDLYNNPASSMATRAKFIVREYNSAMILRVARTGPAFGIGGVGNTAFR 843
            F V+P +TI+DRAI  NASGA   G  +RE   E +  P  F  + EF +I+G+YAATY +AN++ + C   + ++  PKFIGTT VN++  +AKD AF RMF  + P   P+A+  LF  RD +T AASFN P   ++ LQ+   M   +A  FAQ+ CPA+VQ +STPL+LLG+DLYNN   S+A R   I RE+  +++ R+ R GPAFGIGGVGN  FR
Sbjct:    4 FGVAPFITIVDRAIIENASGARPLGRGLRELSVECLKHPLRFIGKREFHLIFGLYAATYASANIVDSVCEYTETDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIVPGSFPLASIGLFAMRDSLTCAASFNAPHVLAEKLQDNNLMKLSSATTFAQVLCPAAVQFVSTPLHLLGLDLYNNKNQSVAQRVALIQREFGKSLLARIGRIGPAFGIGGVGNAYFR 226
[Close]
BLAST of mRNA_F-serratus_M_contig101.204.1 vs. uniprot
Match: A0A0P1AEL6_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEL6_PLAHL)

HSP 1 Score: 202 bits (515), Expect = 2.830e-56
Identity = 108/232 (46.55%), Postives = 148/232 (63.79%), Query Frame = 1 
Query:  148 DIAAGLASSFLVSPSVTILDRAISMNASGAMKTGDSIREGVKEMILRPHVFHCRPEFLMIWGVYAATYVTANMIMTTCARNDVEDTWPKFIGTTFVNITTVVAKDLAFTRMFATVKPRPMPIATYLLFTARDGMTVAASFNMPTPASKYLQERFGMSEKNADVFAQLACPASVQLLSTPLNLLGMDLYNNPASSMATRAKFIVREYNSAMILRVARTGPAFGIGGVGNTAFR 843
            D  A +A+S  V+P +TI+DRAI  NASGA   G  ++E   + +  P  F  + EF +I+G+Y ATY TAN++ + C   D +   PKF GTT VN++  +AKD AF RMF  + P   P+A+  LF  RD +T  ASFN P   +K L++   M + +A  FAQL CPA+VQ +STPL+LLG+DLYNN   ++  R  FI REY  +++ R+ R GPAFGIGGVGN+  R
Sbjct:   23 DTVAAIAASLGVAPFITIVDRAIIENASGARPLGRGLKELSIDFLKNPLRFIGKREFHLIFGLYTATYATANIVDSVCELADTDSQMPKFFGTTAVNMSLCIAKDRAFARMFGVIAPGAFPLASIGLFAVRDSLTCGASFNAPKVLAKKLEDNQLMEKSSASTFAQLICPAAVQFVSTPLHLLGLDLYNNKGHAVTQRIGFIQREYVKSVLARIGRIGPAFGIGGVGNSYVR 254
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig101.204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W2KIJ3_PHYPR1.050e-5947.84Uncharacterized protein n=15 Tax=Peronosporaceae T... [more]
A0A8H7U8D9_MORIS9.200e-5945.82Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
A0A3M6VQY3_9STRA1.520e-5847.23Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A8H7S7R9_9FUNG1.810e-5845.90Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
A0A397IN71_9GLOM4.500e-5847.44Uncharacterized protein n=1 Tax=Diversispora epiga... [more]
A0A015K7Y8_RHIIW4.600e-5844.90Uncharacterized protein n=8 Tax=Rhizophagus TaxID=... [more]
A0A484DVU1_BRELC1.340e-5747.64Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A2D4BK36_PYTIN1.120e-5646.78Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
H6S466_PLAVT1.190e-5648.43Uncharacterized protein (Fragment) n=1 Tax=Plasmop... [more]
A0A0P1AEL6_PLAHL2.830e-5646.55Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig101contigF-serratus_M_contig101:832811..839787 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score223.8
Seed ortholog evalue9.7e-56
Seed eggNOG ortholog67593.Physo109409
Hectar predicted targeting categoryother localisation
EggNOG OGs28PN9@1,2QWAD@2759,3Q8QZ@4776
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons5
Model size2245
Cds size807
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928808.3831644-UTR-F-serratus_M_contig101:832810..8341821622928808.3831644-UTR-F-serratus_M_contig101:832810..834182Fucus serratus maleUTRF-serratus_M_contig101 832811..834182 -
1690962581.7015705-UTR-F-serratus_M_contig101:832810..8341821690962581.7015705-UTR-F-serratus_M_contig101:832810..834182Fucus serratus maleUTRF-serratus_M_contig101 832811..834182 -
1622928808.44079-UTR-F-serratus_M_contig101:839721..8397871622928808.44079-UTR-F-serratus_M_contig101:839721..839787Fucus serratus maleUTRF-serratus_M_contig101 839722..839787 -
1690962581.7583501-UTR-F-serratus_M_contig101:839721..8397871690962581.7583501-UTR-F-serratus_M_contig101:839721..839787Fucus serratus maleUTRF-serratus_M_contig101 839722..839787 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928808.3931012-CDS-F-serratus_M_contig101:834182..8344101622928808.3931012-CDS-F-serratus_M_contig101:834182..834410Fucus serratus maleCDSF-serratus_M_contig101 834183..834410 -
1690962581.7149034-CDS-F-serratus_M_contig101:834182..8344101690962581.7149034-CDS-F-serratus_M_contig101:834182..834410Fucus serratus maleCDSF-serratus_M_contig101 834183..834410 -
1622928808.40279-CDS-F-serratus_M_contig101:834825..8350111622928808.40279-CDS-F-serratus_M_contig101:834825..835011Fucus serratus maleCDSF-serratus_M_contig101 834826..835011 -
1690962581.7257798-CDS-F-serratus_M_contig101:834825..8350111690962581.7257798-CDS-F-serratus_M_contig101:834825..835011Fucus serratus maleCDSF-serratus_M_contig101 834826..835011 -
1622928808.4123442-CDS-F-serratus_M_contig101:835796..8359951622928808.4123442-CDS-F-serratus_M_contig101:835796..835995Fucus serratus maleCDSF-serratus_M_contig101 835797..835995 -
1690962581.7334-CDS-F-serratus_M_contig101:835796..8359951690962581.7334-CDS-F-serratus_M_contig101:835796..835995Fucus serratus maleCDSF-serratus_M_contig101 835797..835995 -
1622928808.421796-CDS-F-serratus_M_contig101:838920..8390601622928808.421796-CDS-F-serratus_M_contig101:838920..839060Fucus serratus maleCDSF-serratus_M_contig101 838921..839060 -
1690962581.741054-CDS-F-serratus_M_contig101:838920..8390601690962581.741054-CDS-F-serratus_M_contig101:838920..839060Fucus serratus maleCDSF-serratus_M_contig101 838921..839060 -
1622928808.4311852-CDS-F-serratus_M_contig101:839667..8397211622928808.4311852-CDS-F-serratus_M_contig101:839667..839721Fucus serratus maleCDSF-serratus_M_contig101 839668..839721 -
1690962581.7506282-CDS-F-serratus_M_contig101:839667..8397211690962581.7506282-CDS-F-serratus_M_contig101:839667..839721Fucus serratus maleCDSF-serratus_M_contig101 839668..839721 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig101.204.1prot_F-serratus_M_contig101.204.1Fucus serratus malepolypeptideF-serratus_M_contig101 834183..839721 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig101.204.1

>prot_F-serratus_M_contig101.204.1 ID=prot_F-serratus_M_contig101.204.1|Name=mRNA_F-serratus_M_contig101.204.1|organism=Fucus serratus male|type=polypeptide|length=269bp
MAATGTMMKSKVDASQKQVSIYSLYAADIAAGLASSFLVSPSVTILDRAI
SMNASGAMKTGDSIREGVKEMILRPHVFHCRPEFLMIWGVYAATYVTANM
IMTTCARNDVEDTWPKFIGTTFVNITTVVAKDLAFTRMFATVKPRPMPIA
TYLLFTARDGMTVAASFNMPTPASKYLQERFGMSEKNADVFAQLACPASV
QLLSTPLNLLGMDLYNNPASSMATRAKFIVREYNSAMILRVARTGPAFGI
GGVGNTAFRKYFASLFTS*
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mRNA from alignment at F-serratus_M_contig101:832811..839787-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig101.204.1 ID=mRNA_F-serratus_M_contig101.204.1|Name=mRNA_F-serratus_M_contig101.204.1|organism=Fucus serratus male|type=mRNA|length=6977bp|location=Sequence derived from alignment at F-serratus_M_contig101:832811..839787- (Fucus serratus male)
AGTACCCTCACTCAACCAACACCCTCTTCTGCTCTCTTAAGGCCAGCCCT
CTCCAACTTTACAATAATGGCGGCCACTGGTACGATGATGAAGTCCAAGG
TTGATGCCTCGCAGAAACAGGTACTTACTTACAGCTCGCAGTGGCGTTGG
CTCATCATCCCGTGCAACAGTTTTGTGGGTTTGTGTAAACGGCCAATTCT
CAATTTTTTGTCATCACGTGGACAGTAGTTTGGTTGTTCTTTTCTTGTGG
CAAGTTATACAACGTCATGCTACGCTTTACTCTTTGTCTTGTGTGCGTAT
TTTTTATATATTTTCTACCAGTAGTGCACTATGAAATACTGTAGATGATT
TGCACCTGCTTTGCAGTCTATGGTCCCACCTAAATGTTTTGACATCTTTT
TCTCCTGGCTGGAGGATGATCAGAAGGTATATAGGCGCGTTCTGATTTTT
CTTTTAAGCAGTATCTGATGAGCTCAGCGCCGTATGCTGCTCGTTAGCCG
CGACCGAGAATCGACTTGTACCCTCATATGTATGGTGTCTGCTCCTAATA
TTGGAGTAACTGTGTAGAGCGCCGTATGCTGCTCGTTAGCCGCGACCGAG
AATCGACTTGTACCCTCATATGTATGGTGTCTGCTCCTAATACTGGAGTA
ACTGTGTAGACCTTCGCCTCCAAGTTCGTTCGTGTGTCAAACCTGTTACC
ATGTGTGCGTTCTGACATTGTTTACAGGTGTCGATCTACTCGCTCTACGC
AGCCGATATCGCAGCTGGCCTTGCGTCGTCCTTCCTGGTGTCCCCAAGCG
TCACGATCCTGGACCGGGCTATCTCTATGAACGCTAGCGGGGCGATGAAA
ACAGGCGATTCCATCAGGTAAGGGCATTGGCACACATACACATGATCTAT
GTTATTATGTCAAAACAGATTATCAAGAAAAGACAACAGCTTCAAACAGC
AGGTAGTATGAGAGTAAAGTATGTTTGTCTCATCCTGTTGTCTTGATGTC
CTCCTGTCGATGGAGTGAATTGCACAGACACCACAGGGAAAGAGTGGCCT
TTTTCTCGATATCACGGACAGCATAGATGCGACAAGCTAGCATTTTTTCA
ATCCTAATGTATCTGCGATGACATTACTCCGTGTTGTTGGGTCGAGAAAT
CGAGCGGAGGCTATCATCTCCGGCGGCAGTGTGTTTTTCACGATGTGGTC
CTTCATAACACAAAAAACGTAATACATGTACATTATTGTACCAGTACAGT
TTTAGTATCTGTAGTAGTAATGGTTTCTTCTAACCAATGTAGTAATGGTC
ACTGACACGCCACTGACTTCTGATCTTTTAACTGTTGTAAAACCCCTAGC
AGACCATCTGCGCTATTTTACAACCATCTGTCTGTACCTGTACTGTAATA
CGTAATACGTATGTCCCGTCGTGCTGACATGGATCACCTGTCTATATACA
TACGTGTAGTGGTACGGATGTCCCGTAGTGTTGACGTGGGAAACCGCTCT
TTCTATTTCTTCTACCATAGACTAGTCTATACATAAGGCGGGAAAACCTG
AACGGAAAAATTGAAGCTGCTCCGTGTCTCTCGCAACTCTCTTGCATGTA
TTGATACTAATAGTAAGTACTATTAAACGTCAACGTTATCAGTAGTCGCT
ACAGATTCGTAAGTACGGCGCTTTGGCATTTCGAGCCCAAGGAATCCTGT
ACAACGGACGCGAGACGGACCGAGACCTGCGTAGCGCCTAGGCATAGCAT
GTAGATGCGTCACGTGATTTATTTTATTTTTCCTTCAAAGTCGTGGGAGG
GGGGTGGGGGCATGCGCTGCCAGACTCTCTCTTTTTCTGTCCTCTTTTCC
CTGTTCAGCAAACCACGAGCGAGCGGGATCGGCCACCGTATAATAATAAT
ATACCTGGTAATAATAAAGGGCCACTAGGTTCGGGGTTGGCAACCCATTT
TACTATCTACCACGCTGAATGCTGTGAGAAACAATAGTAGGTCTCTCCCC
GACATTATACAGTACTGTTAACCCAAGGGTTACTATCATTGGGGGGGGCA
TTTAGAAGCTATGAAGAGGTTGCGTATTTTGTAGCCTATATCGATGACAC
TAGAATGCCCTCCAACGAGTGTAGAACGATTAGATCGTTAGTACACAAAA
TTGACTTCACGGTGGACGAGGGAAAGGAATGGCTGAATCCTTCTCGCGAG
AAAAATAAAGGCACGCACCGCAGAAGGAAGGTAGATGAGAAATCCTGTGT
GACCCTTCTCCTGTGTAACCCCGGCTGGTACGTCCAACGAATTTGATGTC
CAGATTGAATGGGAAGAAAAAAAACACAAATACACACACAGCAGTAGAAT
GTCCCTGCGGATAACTTATAATATATATACCAGGGTAATAGTCTACTGGT
ATGTATTTATTTTTACCAATACAATATTGTAACGTTGCTTGTGTTCTAGA
CCATAAGCCCTTAATACCTTGTTGTATAAGAAAGAGTCGATGGCACTAAT
ACTCTGTATATCATTACTACAGCCACTTGTATAAACCTATGCATTATGTA
CTTACAAAGTTTTTGTTTTATCATTGTCTGGTGTCCCTGCATGTCGATAA
CTGTAAGTGTACAGCATAACAATGGGTTTATCCCCGGTATGTTGTACTGT
GGGCCCAATGTTATCGTACCATCGGGGAACCCGATTGAATGCCATGAAGA
GATTTATTGTTATTTGCAGTCTGTGATCCCACCTGAACGTTTTGACATTT
TTTCCGTCTGACTGGGGGATGCTCAGAAGCTTTAGATACGTTCAAATTGT
TCTTTCAACAATATTTTTTTTTGAACACACACCACTTGCTTTATATTACT
TTAGGCTATTAATAATAGACTCTAGGCTGTGTTCGTTCGTGGAGTGCTTA
CTTCTGTACTGTACTATATGTAATATTTACGACTGTACCATGTATGTTTT
TTTTACTATACGTACAGTACTTACTGTATGTTTTAGTACATACGATTAGT
TGTAACGTGCAGCACAGCTAGAGGCCGCTGTCTGACGACGACCCGCGAGC
AAGAACGCTGCTAAAGTATAGCTATTACAGTATTAATAGTATTTGTAGTA
TTACAGTAGCCAACGAAAGTTAATGCGCACGTTTACAGACAGTCTCCTGA
TTGAAAAATGGACGCACAACATTTCTCTACAACTAGTCTATCACCTGTAG
TACTTGTACATATAATGTTCTATTTGTTGTACGGTACATACCGTCGAAAA
TCCTGAAGGTTGCACTGTGGTTAGCTGTACCGTTAAGAAAAAATCTCAAC
GCAGCTAAACCTCCTTAGCAATCAAAAGGTTAAGGTTTAGGTGGGAACAT
TGCGGCTGTAAGGATAAAAACTCTACATTTGTTCCTTTTACTACTACAGA
GCTATTTCGGCGCTTACCCTAAGCCTTTCTTGAGCTTGACTAGTCCGCGC
CTCAGGCACCGCTTTTGGTAATGGAAGTGGGCAATTGAGCGTTTTACTAT
AGATTCCCAGCCACATTCTTAGTTAAACACATGTTTCTTGCGGTAGTCTT
TTTATTAATAGGATAATAGTGTACAGGCCCTCAAACTACACCACCAGCAA
GTTCGGTATCATAGTAAAAGACTTCAGAAATATGGGGCTCCGTGTCTAAT
AATAAAACGTAATTATTTGGTACAGGCATAAAATATTCCTACGCACTACG
TGATTTTTAAGATTATTCGAGTGGGTGTTAATTACGAAGGTATGTAAATG
CTGTTTTAATTTACCCAGCGTCTTCTTGTTCGTTGTACCCAGGGAAGGAG
TCAAGGAGATGATCCTCAGGCCTCACGTGTTCCACTGCCGCCCGGAGTTC
CTCATGATTTGGGGTGTCTACGCGGCAACTTACGTTACCGCCAACATGAT
CATGACGACTTGTGCTCGAAACGACGTGGAAGACACGTGGCCGAAGTTCA
TTGGTACCACCTTTGTCAACATCACCACTGTTGTCGCCAAGGTAAGCTCC
CTCGATTCTGAGAAATTCTGAGTACAGCAGTAATAGAACCGAGAATAACT
AACTAATGTTCTTCTAGCGGTATGAATAACGCTTGGTAGCGTAACCTTAC
AAGCGTGCTTAGCAAAAACCCAAGTACAAAATGCTGTTGGAACCTCATAT
CTGACCATTTTCTCAATAGATACAGGTAGCACCGCCGTCGAGATCTGCGT
GGTCGTTTCACCAAACATGTTGGGAAGATGTTTCAAACACGCCCTCCCGC
CCCTGTCGAATAGCCAATCTCGAATATGGGTTCAATTAGGCTTCGCCTAA
ATACTAGAGCTAACTTTCTAATACAATGGAAACTTCAATATTTGCGCACA
AAGGGGCGGCAGCGCTCTTCTATGCTTTACCGAGACACGTAGAGTCAACC
CTAACGCCTCTTCTCTTGTGTTTGAGCTGTTACGGTTGCTTCCGGCCCTG
AATAACAAATATGCGCCAGTTTCAACTGTTACACTTGATGAGTTTAGGTA
GCTTGTCGACAATAGCGGTCGCCTCTTCGTTCGACAGGAGGACCGTTATG
TAGTTTTTCGGATCATTGTGTCATCTACAAAGTGGAATGTCGAGGTTTTT
CATGCGATCTGCCTCTCTCTGCTTTTGGGTTTCCCTGATTGTTCCTACCA
TCAGATCGCAAAAGTTTGGCATGCAAACTATATCTCCTTGTGCTAACACC
TTAATGTTTTGGAGGCAGAAAATTGACGCCATCTCTCCCTTCCTTTTTTG
TTTGATCTGTGCTTTGTTTTTCCCAGGACCTCGCGTTCACGCGTATGTTC
GCAACGGTCAAGCCGAGGCCGATGCCAATCGCGACCTATTTGCTGTTCAC
GGCCCGCGACGGTATGACCGTTGCAGCGTCGTTCAACATGCCCACTCCGG
CGTCCAAGTACTTGCAGGAGCGGTTTGGGATGTCAGAGAAGAACGCTGAC
GTCTTCGCCCAGGTATGCAAGGCTACGGGATTTCAGGGGGTCCAAAGTTA
TTGACTGGGGTTTTGACGGTCTGGTTCTGTTCTATTGGTGGAGACCAGGC
AACCGAGACGACCGGAAAGCACATCGAACAGCAGAGTACTTTGCAGAGGG
TGCGATGATCAGAATATTAGCCATGGCATCTTTCGTTGAGCCGAGCACTA
TCCCAGATGTTGACAAGCTGCCCGGTTTTAACTTTTTCTCAAATCGAGTA
ACACTGAAACTGCATTACATTATGATATCACCCCAAGAACGTTCGTTCCG
CTGGGATGGCATGTTTGACGGTAACCGTACCGCGTGGTGTTAGACTAGGT
ATTAACGATATCCCCCCCCCCCCCCTTCGCCCACCGCCCCCAACCCCCCT
TTCGGACGTGTACCCACTGATACGCAGCTCGCATGCCCGGCCAGCGTCCA
GCTTCTTTCGACCCCCCTGAATCTCCTGGGGATGGACCTGTACAACAACC
CCGCCAGCAGCATGGCGACCCGCGCGAAGTTCATCGTCAGGGAGTACAAC
TCGGCCATGATTTTGCGAGTCGCTCGCACCGGTCCCGCGTTCGGGATCGG
AGGTGTGGGAAACACGGCGTTCCGAAAATACTTCGCCTCCTTGTTCACCT
CTTAAGGCTCTGGTTACGGCCGTGGGCGGTGCGGTGCTTCGAAAAAGAAG
GGTTGGAAAGGCGTAAACGCGTGTCACCTTGCTGTTGTAGATATGACGGG
GGAAAAAGCGTCTGGATGGCCTGGGGAGTTGATCACCTAGTGCGAAAGTA
TAGTTGTACAGATACGAACAAGTGGGAACTGCGACTTATTTGGAGGCTTG
CGTACGTCACCCTCTAGAAGATAGAAGTGAATGAACTCACCCATCAAGTA
ACAATCGCGGATCTATTTTTTTTATTGAGAGTTTGTACTTCACTACATCT
AAGTTTTGGGTACACGTTGAAATGAGAGAAGAGCAGGGGGCAATAATATG
GGCACGCGAGCATGATATATATATTTCTGTCAATGACCAACTGTGTCATT
ATTTACGACGACGGCGCTTAAAGAAGGTGTTCAAGGATAAGATGTGTGAG
TGGTGGGGAGTTGATGGGAGAGCGGGAGGATGCAAGAGAGGCGCGAGAAA
ATAGTGGCCTGCTTGACGCCTTTCCCTTTTCCCTAAACGTGTTGAAAGAG
GTACGAAACATCTAATGGCCTTCGATGGTTGGCCTTTTATGCGTGCGATA
TCATCATGAGGCCACTGTCAGCAGCGATGTGATGAATTCCGGCGTCCGGG
CGAAGCGATTGATAAAGTCTCGAACGAGTTCAACTGCCATGTTGCGGACG
GAGCTAATATAACTAAGATCACCTCGTACGTGAAGTCAAAAGTCATAAGG
CCACGTCTCGTCTTTGGCACCGTAAAATTTCGTCCTCGCACGGAACGGTT
ATAAACGTTATTGTACTATAATGGGTGTCTTTTCTGGTTTTTTTTTTAGA
AATATTGTTTACGAACTCGATTGCTCCGTTCTCTTCAGTCTCCGCCGTGG
TTGGTCATGTTCATTGGGTATCCATGCAGCGAAGTTGAGGAACTGAAATT
AAAAGCCACCCAATTAGCAGGATTCGCACCGGAAGAAGTGTGCCCACTTG
CTTGCTCAAGTGAGGATGATGATGACTTCATTCGAGGCATCTCCCCGAAA
CCCCGCACTATTCTTTTATGAGTATAAAAAGAGGTTTTAGGGTGACGGAA
AACTTAATTGATGAGAAGAGCGTTGTTAATTTTGTTTTTCGCGGAAATTG
AAGGAAGGGGTTGAAACCTAAGACAATCTTGCATCCTTTCCCCCGCCGCT
CGGGCGGGTAACAAGAACGGTGTCATAAAGCGCGTCGTTGTTTGAACTAT
CGGCCAGCTGCGAGACGCATGCATGCAATTTGCCCTTCGTTGCTGAGTCA
CCCTTTTTTTACCCTGTTTATTTTGCTTATTTCCACAGCAAAATTGAAAG
ACGAGGGCTAAGCTTTGTCGCTTTTCA
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Coding sequence (CDS) from alignment at F-serratus_M_contig101:832811..839787-

>mRNA_F-serratus_M_contig101.204.1 ID=mRNA_F-serratus_M_contig101.204.1|Name=mRNA_F-serratus_M_contig101.204.1|organism=Fucus serratus male|type=CDS|length=1614bp|location=Sequence derived from alignment at F-serratus_M_contig101:832811..839787- (Fucus serratus male)
ATGGCGGCCACTGGTACGATGATGAAGTCCAAGGTTGATGCCTCGCAGAA
ACAGATGGCGGCCACTGGTACGATGATGAAGTCCAAGGTTGATGCCTCGC
AGAAACAGGTGTCGATCTACTCGCTCTACGCAGCCGATATCGCAGCTGGC
CTTGCGTCGTCCTTCCTGGTGTCCCCAAGCGTCACGATCCTGGACCGGGC
TATCTCTATGAACGCTAGCGGGGCGATGAAAACAGGCGATTCCATCAGGT
GTCGATCTACTCGCTCTACGCAGCCGATATCGCAGCTGGCCTTGCGTCGT
CCTTCCTGGTGTCCCCAAGCGTCACGATCCTGGACCGGGCTATCTCTATG
AACGCTAGCGGGGCGATGAAAACAGGCGATTCCATCAGGGAAGGAGTCAA
GGAGATGATCCTCAGGCCTCACGTGTTCCACTGCCGCCCGGAGTTCCTCA
TGATTTGGGGTGTCTACGCGGCAACTTACGTTACCGCCAACATGATCATG
ACGACTTGTGCTCGAAACGACGTGGAAGACACGTGGCCGAAGTTCATTGG
TACCACCTTTGTCAACATCACCACTGTTGTCGCCAAGGGAAGGAGTCAAG
GAGATGATCCTCAGGCCTCACGTGTTCCACTGCCGCCCGGAGTTCCTCAT
GATTTGGGGTGTCTACGCGGCAACTTACGTTACCGCCAACATGATCATGA
CGACTTGTGCTCGAAACGACGTGGAAGACACGTGGCCGAAGTTCATTGGT
ACCACCTTTGTCAACATCACCACTGTTGTCGCCAAGGACCTCGCGTTCAC
GCGTATGTTCGCAACGGTCAAGCCGAGGCCGATGCCAATCGCGACCTATT
TGCTGTTCACGGCCCGCGACGGTATGACCGTTGCAGCGTCGTTCAACATG
CCCACTCCGGCGTCCAAGTACTTGCAGGAGCGGTTTGGGATGTCAGAGAA
GAACGCTGACGTCTTCGCCCAGGACCTCGCGTTCACGCGTATGTTCGCAA
CGGTCAAGCCGAGGCCGATGCCAATCGCGACCTATTTGCTGTTCACGGCC
CGCGACGGTATGACCGTTGCAGCGTCGTTCAACATGCCCACTCCGGCGTC
CAAGTACTTGCAGGAGCGGTTTGGGATGTCAGAGAAGAACGCTGACGTCT
TCGCCCAGCTCGCATGCCCGGCCAGCGTCCAGCTTCTTTCGACCCCCCTG
AATCTCCTGGGGATGGACCTGTACAACAACCCCGCCAGCAGCATGGCGAC
CCGCGCGAAGTTCATCGTCAGGGAGTACAACTCGGCCATGATTTTGCGAG
TCGCTCGCACCGGTCCCGCGTTCGGGATCGGAGGTGTGGGAAACACGGCG
TTCCGAAAATACTTCGCCTCCTTGTTCACCTCTTAACTCGCATGCCCGGC
CAGCGTCCAGCTTCTTTCGACCCCCCTGAATCTCCTGGGGATGGACCTGT
ACAACAACCCCGCCAGCAGCATGGCGACCCGCGCGAAGTTCATCGTCAGG
GAGTACAACTCGGCCATGATTTTGCGAGTCGCTCGCACCGGTCCCGCGTT
CGGGATCGGAGGTGTGGGAAACACGGCGTTCCGAAAATACTTCGCCTCCT
TGTTCACCTCTTAA
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