mRNA_F-serratus_M_contig101.201.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 1.100e-10 Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = -3 Query: 156 CCILHNMLHAYDGLDKLEEDVDWAGGDGLHDSITDPSVTPATDCSSVGGPSNNESVEVEPSHDELKRKLITSFTYRKEHN-DIVWLTR 416 CCI+HNMLH +DG+D+L E+ G+ ++ DC SVG N+ ++E KR+L TSF YRK+H DIVWL+R Sbjct: 375 CCIMHNMLHTFDGMDQLVENTIRVSSAGVGATLA---TELEADCGSVGRRDVNDQPQLEIGRTVRKRQLTTSFAYRKKHKKDIVWLSR 459
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5JLC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLC3_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 3.690e-10 Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = -3 Query: 165 CCILHNMLHAYDGLDKLEEDVDWAGGDG-LHDSITDPSVTPATDCSSVGGPSNNESV-EVEPSHDELKRKLITSFTYRKEHNDIVW 416 C ILHNML AYDG++ LE D DWAG DG L + I P V + P++ ++V E + + L++KL+T+F YR + W Sbjct: 70 CIILHNMLLAYDGIELLEPDCDWAGADGDLDEDIVHPDVR-------MSAPTHEDAVVECDAGFEALRQKLVTNFAYRWGQGTVGW 148
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5JP18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP18_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 9.320e-10 Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = -3 Query: 165 CCILHNMLHAYDGLDKLEEDVDWAGGDG-LHDSITDPSVTPATDCSSVGGPSNNESV-EVEPSHDELKRKLITSFTYRKEHNDIVW 416 C ILHNML AYDG++ LE D DWAG DG L +I P V + P++ ++V E + D L++KL+T+F YR + W Sbjct: 101 CIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVVR-------MSAPTHEDAVVECDDGFDALRQKLVTNFAYRWGQGTVGW 179
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5J6J6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6J6_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 1.270e-9 Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = -3 Query: 165 CCILHNMLHAYDGLDKLEEDVDWAGGDG-LHDSITDPSVTPATDCSSVGGPSNNESV-EVEPSHDELKRKLITSFTYRKEHNDIVW 416 C ILHNML AYDG++ LE D DWAG DG L +I P V + P++ ++V E + D L++KL+T+F YR + W Sbjct: 122 CIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVVR-------MSAPTHEDAVVECDDGFDALRQKLVTNFAYRWGQGTVGW 200
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 4.500e-9 Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = -3 Query: 165 CCILHNMLHAYDGLDKLEEDVDWAGGDG-LHDSITDPSVTPATDCSSVGGPSNNESV-EVEPSHDELKRKLITSFTYRKEHNDIVW 416 C ILHNML AYDG++ LE D DWAG DG L +I P V + P++ ++V E + D L++KL+T+F YR + W Sbjct: 372 CIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVVR-------MSAPTHEDAVVECDDGFDALRQKLVTNFAYRWGQGTVGW 450
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5JBW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBW9_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 1.780e-8 Identity = 36/77 (46.75%), Postives = 44/77 (57.14%), Query Frame = -3 Query: 189 CCILHNMLHAYDGLDKLEEDVDWAGGDG-LHDSITDPSVTPATDCSSVGGPSNNESVEVEPSHDELKRKLITSFTYR 416 C ILHNML AYDG++ LE D DWAG DG L D I P D + E VE + EL++KL+T+F YR Sbjct: 107 CVILHNMLLAYDGIELLEADCDWAGADGNLDDHIVHP------DARRMAITHEAEVVEWDDDFLELRQKLVTNFAYR 177
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5JKX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKX2_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 3.100e-7 Identity = 35/77 (45.45%), Postives = 43/77 (55.84%), Query Frame = -3 Query: 189 CCILHNMLHAYDGLDKLEEDVDWAGGDG-LHDSITDPSVTPATDCSSVGGPSNNESVEVEPSHDELKRKLITSFTYR 416 C ILHNML AYDG++ LE D DWA DG L D I P D + E VE + EL++KL+T+F YR Sbjct: 112 CVILHNMLLAYDGIELLEADCDWARADGNLDDHIVHP------DARRMAITHEAEVVEWDDDFLELRQKLVTNFAYR 182
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE) HSP 1 Score: 56.6 bits (135), Expect = 1.150e-6 Identity = 36/88 (40.91%), Postives = 43/88 (48.86%), Query Frame = -3 Query: 198 CCILHNMLHAYDGLDKLEEDVDWAGGDGLHDSITDPSVTPATDCSSVGG------PSNNESVE---------VEPSHDELKRKLITSF 416 CCI HNMLH +DGLD EE+ DW G G HD+ P D +SVG P + E E H ELK++LI SF Sbjct: 308 CCIRHNMLHTFDGLDLFEENTDWTGSAGHHDAWE---RDPLMDYTSVGSKGVLLPPKDGEKEERGEGGHVRKERQDHAELKKQLIESF 392
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5JUC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC8_9PHAE) HSP 1 Score: 50.4 bits (119), Expect = 1.070e-5 Identity = 32/79 (40.51%), Postives = 41/79 (51.90%), Query Frame = -3 Query: 165 MLHAYDGLDKLEEDVDWAGGDG-LHDSITDPSVTPATDCSSVGGPSNNESVEVEPSHDELKRKLITSFTYRKEHNDIVW 398 ML AYDG++ LE D DWAG DG L D I P D + E VE + EL++KL+T+F YR + W Sbjct: 1 MLLAYDGIELLEADCDWAGADGNLDDHIVHP------DARRMAITHEAEVVEWDDDFLELRQKLVTNFAYRWGQGTVGW 73
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Match: A0A6H5JXJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXJ4_9PHAE) HSP 1 Score: 51.2 bits (121), Expect = 1.410e-5 Identity = 26/64 (40.62%), Postives = 33/64 (51.56%), Query Frame = -3 Query: 225 CCILHNMLHAYDGLDKLEEDVDWAGGDGLHDSITDPSVTPATDCSSVGGPSNNESVEVEPSHDE 416 CCILHNMLH +DG+D+L E+ W G G + D S VG N+ +VE H E Sbjct: 59 CCILHNMLHIFDGMDQLVENTLWVSGAGAGTGVA---TEQEADSSFVGAKDTNDKEQVEKGHGE 119 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig101.201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig101.201.1 >prot_F-serratus_M_contig101.201.1 ID=prot_F-serratus_M_contig101.201.1|Name=mRNA_F-serratus_M_contig101.201.1|organism=Fucus serratus male|type=polypeptide|length=110bp MRKLFGRARPASVHVSIVHIFMHPCLESKAYLVSQTMSLCSLRYVKEVMSback to top mRNA from alignment at F-serratus_M_contig101:799578..799995+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig101.201.1 ID=mRNA_F-serratus_M_contig101.201.1|Name=mRNA_F-serratus_M_contig101.201.1|organism=Fucus serratus male|type=mRNA|length=418bp|location=Sequence derived from alignment at F-serratus_M_contig101:799578..799995+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig101:799578..799995+ >mRNA_F-serratus_M_contig101.201.1 ID=mRNA_F-serratus_M_contig101.201.1|Name=mRNA_F-serratus_M_contig101.201.1|organism=Fucus serratus male|type=CDS|length=660bp|location=Sequence derived from alignment at F-serratus_M_contig101:799578..799995+ (Fucus serratus male)back to top |