|
Homology
BLAST of mRNA_F-serratus_M_contig101.199.1 vs. uniprot
Match: A0A024TZ79_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZ79_9STRA) HSP 1 Score: 148 bits (374), Expect = 2.830e-38 Identity = 88/217 (40.55%), Postives = 129/217 (59.45%), Query Frame = 2
Query: 272 MTSIKKLYLVSYNLACATGWGFVLFLCLKNFAAQAE----PQALYDDVEKVLQIVQTAALMEVLHALFGVVRSPWLTTMFQVASRLILVWAFLWAVPSTQAQIGAVLCITSWAAVEIPRYLFYASGVLGSCPYALFYLRYSLFFVLYPTGIAGEVMTVLAALPELEDSKDSLSL-GVGPVRVSGYLASIALLLLYVPIGPFLYMYMVGNRRIAFKKR 907
M IK YLV +NLA + GW +VL + A + L+ ++ L++VQT A+ EVLHA+ G+VRSP +T+ QV+SRL LVWA P ++ G +L + SW+ VE+PRY FYA +L + P LF+LRY LF VLYP+G+ GEV ++ ALP L S+ + + VS Y+ + L++Y P PF+Y +M R+ A+ K+
Sbjct: 1 MALIKTAYLVLFNLASSLGWAYVLGQTFQLVYADQDIALSSAKLWGVIDTPLKVVQTMAVFEVLHAMLGLVRSPVGSTLMQVSSRLFLVWAINVLCPDSRYHWGFILMVASWSLVEVPRYAFYALNLLEAVPDWLFFLRYHLFMVLYPSGVTGEVTCMVKALPFLSTGAYSIQMPNTHNISVSLYVIVLLTLVVYAPGLPFMYTHMNVQRKKAYAKK 217
BLAST of mRNA_F-serratus_M_contig101.199.1 vs. uniprot
Match: A0A833VPS0_9POAL (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Carex littledalei TaxID=544730 RepID=A0A833VPS0_9POAL) HSP 1 Score: 147 bits (371), Expect = 6.660e-38 Identity = 87/218 (39.91%), Postives = 127/218 (58.26%), Query Frame = 2
Query: 269 LMTSIKKLYLVSYNLACATGWGFVLFLCLKNFAAQAEPQALYDDVEKVLQIVQTAALMEVLHALFGVVRSPWLTTMFQVASRLILVWAFLWAVPSTQAQIGAVLCITSWAAVEIPRYLFYA-SGVLGSCPYALFYLRYSLFFVLYPTGIAGEVMTVLAALPELEDSKDSLSLGVGPVRVSG--YLASIALLLLYVPIGPFLYMYMVGNRRIAFKKRQA 913
+ +++K++YL YN A +GW VL +K ++ P A+YD+VEK LQ+ QTAA++E++H L G+VRSP T+ Q+ SRL + W L++ P T+ + + SW+ EI RY F+ LG P L +LRYS F +LYPTGI EV + ALP ++ S+ S Y ASI +L +YVP P +Y YM+G R+ A K +A
Sbjct: 4 IFSTVKRIYLAIYNWAVFSGWLQVLIFAIKALN-ESGPAAVYDNVEKPLQLAQTAAILEIIHGLIGLVRSPVSATLPQIGSRLFVTWGILYSFPETRTHVLVSSLVISWSLTEIIRYSFFGMKEALGFTPSWLLWLRYSTFLLLYPTGITSEVGLIYIALPYIKASEKYCFRMPNKWNFSFDYYFASIGVLGIYVPGSPHMYTYMLGQRKKALSKLKA 220
BLAST of mRNA_F-serratus_M_contig101.199.1 vs. uniprot
Match: UPI0018D6FA9F (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D6FA9F) HSP 1 Score: 147 bits (372), Expect = 7.680e-38 Identity = 86/222 (38.74%), Postives = 126/222 (56.76%), Query Frame = 2
Query: 272 MTSIKKLYLVSYNLACATGWGFVLFLCLKNFAAQAEPQALYDDVEKVLQIVQTAALMEVLHALFGVVRSPWLTTMFQVASRLILVWAFLWAVPSTQAQIGAVLCITSWAAVEIPRYLFYASGVLGSCPYALFYLRYSLFFVLYPTGIAGEVMTVLAALPELEDSKDSLSLGVGPVRVSG--YLASIALLLLYVPIGPFLYMYMVGNRRIAFKKRQAISDKKI 931
++ + YLV YN+ GW V + ++++ +YD VE L++ QTAA++E+ H G+V S + T FQV SR++L+W AVP Q +I L I +W EI RY FY G+L PYAL + RY+LF VLYP G+ GE++T+ AALP +++S + VS Y I ++LLY+PI P LY +M+ R+ K +S KKI
Sbjct: 19 VSGLATAYLVIYNVVLCAGWTAVGVMAVRHYLQTKTNIGIYDTVEVPLKVFQTAAVLEIFHCAIGIVPSSVMITAFQVFSRVMLLWPITHAVPQVQDEISVPLYIAAWTVTEIMRYAFYTLGLLNRLPYALTWCRYTLFIVLYPLGVTGELLTIYAALPHVKESGLFSFTLPNDLNVSFDYYSFLIVIMLLYIPIFPRLYSHMIRQRK---KVIGGVSSKKI 237
BLAST of mRNA_F-serratus_M_contig101.199.1 vs. uniprot
Match: UPI001CF1CD5F (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF1CD5F) HSP 1 Score: 146 bits (369), Expect = 1.190e-37 Identity = 82/214 (38.32%), Postives = 123/214 (57.48%), Query Frame = 2
Query: 272 MTSIKKLYLVSYNLACATGWGFVLFLCLKNFAAQAEPQALYDDVEKVLQIVQTAALMEVLHALFGVVRSPWLTTMFQVASRLILVWAFLWAVPSTQAQIGAVLCITSWAAVEIPRYLFYASGVLGSCPYALFYLRYSLFFVLYPTGIAGEVMTVLAALPELEDSKDSLSLGVGPVRVSG--------YLASIALLLLYVPIGPFLYMYMVGNRR 889
M ++ K+YLV YN+A GW +L L +++ + LYD +E+ LQI Q+AA++EVLH G+V S + T FQVASRL + WA +VP G + I +W+ E+ RY FYA ++ S PY L + RY+ F++LYP G+ GE++T+ ++LP L S G+ VR+ Y I L+ Y+PI P LY +M+ R+
Sbjct: 1 MATLAKVYLVIYNVALTIGWSVILALSIQHLIRKKNHIGLYDSIEQPLQIFQSAAILEVLHCAVGLVPSSVMLTAFQVASRLFVTWAIAHSVPEIHDSPGVMAFIFAWSITEVIRYSFYAFSLINSLPYFLQWCRYTFFYILYPIGVTGELVTMYSSLPYLSKS------GMYSVRLPNAFNFGFDFYSLVIVLMFSYIPIFPQLYFHMIRQRK 208
BLAST of mRNA_F-serratus_M_contig101.199.1 vs. uniprot
Match: A0A7S2SGL6_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGL6_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.410e-37 Identity = 91/214 (42.52%), Postives = 127/214 (59.35%), Query Frame = 2
Query: 281 IKKLYLVSYNLACATGWGFVLFLCLKNFAAQAEPQALYDDVEKVLQIVQTAALMEVLHALFGVVRSPWLTTMFQVASRLILVWAFLWAVPSTQAQIGAVLCITSWAAVEIPRYLFYASG-VLGSCPYALFYLRYSLFFVLYPTGIAGEVMTVLAALPELEDSKDSLSLGVGPVRVSGYLASIALLLLYVPIGPFLYMYMVGNRRIAFKKRQAIS 919
+ + YL YN+ A GWG+VL+L L+N + P + ++ L +VQ+ +E+ HAL G+VRSP T QV SRL++VW + +P+ Q L + SWA VEI RY FYAS V G+ P+ LF+LRYSLF VLYPTGI GEV+ +L ++P + S PV Y + I +L +YVP PF+ M NR+ A KKR+A +
Sbjct: 2 LVRAYLTLYNVLSAAGWGYVLYLALENLKSGGTPAEAWANLGLPLTVVQSTMALEIFHALLGLVRSPVFVTFMQVTSRLVVVWGATYWLPACQEHWSLYLIVVSWAIVEIVRYSFYASNLVTGTTPFPLFWLRYSLFMVLYPTGITGEVVQLLVSMPYWQVS--------APVW---YRSLILILAVYVPGSPFMINNMWRNRKSALKKRKAAA 204
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 314.7 |
Seed ortholog evalue | 3.5e-83 |
Seed eggNOG ortholog | 2880.D7FN17 |
KEGG rclass | RC00770,RC01095 |
KEGG ko | ko:K10703 |
KEGG Reaction | R07760,R10827 |
KEGG Pathway | ko00062,ko01040,ko01110,ko01212,map00062,map01040,map01110,map01212 |
KEGG Module | M00415 |
Hectar predicted targeting category | signal peptide |
EggNOG free text desc. | 3-hydroxy-lignoceroyl-CoA dehydratase activity |
EggNOG OGs | COG5198@1,KOG3187@2759 |
Ec32 ortholog description | Putative tyrosine phosphatase |
Ec32 ortholog | Ec-25_001190.1 |
EC | 4.2.1.134 |
COG Functional cat. | O |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002,ko01000,ko01004 |
Exons | 4 |
Model size | 1430 |
Cds size | 672 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928807.8603532-UTR-F-serratus_M_contig101:269359..269846 | 1622928807.8603532-UTR-F-serratus_M_contig101:269359..269846 | Fucus serratus male | UTR | F-serratus_M_contig101 269360..269846 - |
1690962581.5411367-UTR-F-serratus_M_contig101:269359..269846 | 1690962581.5411367-UTR-F-serratus_M_contig101:269359..269846 | Fucus serratus male | UTR | F-serratus_M_contig101 269360..269846 - |
1622928808.133087-UTR-F-serratus_M_contig101:282681..282952 | 1622928808.133087-UTR-F-serratus_M_contig101:282681..282952 | Fucus serratus male | UTR | F-serratus_M_contig101 282682..282952 - |
1690962581.6080227-UTR-F-serratus_M_contig101:282681..282952 | 1690962581.6080227-UTR-F-serratus_M_contig101:282681..282952 | Fucus serratus male | UTR | F-serratus_M_contig101 282682..282952 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928807.8719013-CDS-F-serratus_M_contig101:269846..270032 | 1622928807.8719013-CDS-F-serratus_M_contig101:269846..270032 | Fucus serratus male | CDS | F-serratus_M_contig101 269847..270032 - |
1690962581.5524905-CDS-F-serratus_M_contig101:269846..270032 | 1690962581.5524905-CDS-F-serratus_M_contig101:269846..270032 | Fucus serratus male | CDS | F-serratus_M_contig101 269847..270032 - |
1622928807.8853533-CDS-F-serratus_M_contig101:270569..270711 | 1622928807.8853533-CDS-F-serratus_M_contig101:270569..270711 | Fucus serratus male | CDS | F-serratus_M_contig101 270570..270711 - |
1690962581.571135-CDS-F-serratus_M_contig101:270569..270711 | 1690962581.571135-CDS-F-serratus_M_contig101:270569..270711 | Fucus serratus male | CDS | F-serratus_M_contig101 270570..270711 - |
1622928808.1084116-CDS-F-serratus_M_contig101:271120..271290 | 1622928808.1084116-CDS-F-serratus_M_contig101:271120..271290 | Fucus serratus male | CDS | F-serratus_M_contig101 271121..271290 - |
1690962581.5840738-CDS-F-serratus_M_contig101:271120..271290 | 1690962581.5840738-CDS-F-serratus_M_contig101:271120..271290 | Fucus serratus male | CDS | F-serratus_M_contig101 271121..271290 - |
1622928808.1206648-CDS-F-serratus_M_contig101:282507..282681 | 1622928808.1206648-CDS-F-serratus_M_contig101:282507..282681 | Fucus serratus male | CDS | F-serratus_M_contig101 282508..282681 - |
1690962581.596236-CDS-F-serratus_M_contig101:282507..282681 | 1690962581.596236-CDS-F-serratus_M_contig101:282507..282681 | Fucus serratus male | CDS | F-serratus_M_contig101 282508..282681 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig101.199.1 >prot_F-serratus_M_contig101.199.1 ID=prot_F-serratus_M_contig101.199.1|Name=mRNA_F-serratus_M_contig101.199.1|organism=Fucus serratus male|type=polypeptide|length=224bp
MTSIKKLYLVSYNLACATGWGFVLFLCLKNFAAQAEPQALYDDVEKVLQI VQTAALMEVLHALFGVVRSPWLTTMFQVASRLILVWAFLWAVPSTQAQIG AVLCITSWAAVEIPRYLFYASGVLGSCPYALFYLRYSLFFVLYPTGIAGE VMTVLAALPELEDSKDSLSLGVGPVRVSGYLASIALLLLYVPIGPFLYMY MVGNRRIAFKKRQAISDKKIKPQ* back to topmRNA from alignment at F-serratus_M_contig101:269360..282952- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig101.199.1 ID=mRNA_F-serratus_M_contig101.199.1|Name=mRNA_F-serratus_M_contig101.199.1|organism=Fucus serratus male|type=mRNA|length=13593bp|location=Sequence derived from alignment at F-serratus_M_contig101:269360..282952- (Fucus serratus male) ATAATACTTAAAGTTATCATAGTACTGTACTGTTGTTCTGTACATTTTAT
ATGTGTTTTAACGACCATCAATACTACCTATAGACTACGAATTACAGAGT
ATATGAAAGAATATAAGCAGTGGTGTACGCCAAAGCAAAGCGAAGTTCAG
GGAGATATTGGTGGCAAGGAAAACCGCCGAAAGTATCCCTACAGAGGAAG
GACGGAGTTGACCAATCTTTTTGGCTTCAGCGTCAGGGAGAGTCTGATTG
GGAGAGTTTGATTCGGTACTGATGACGTCGATTAAGAAATTGTATCTGGT
GAGTTACAACTTGGCGTGTGCCACGGGTTGGGGCTTCGTCCTCTTCTTAT
GTCTGAAGAATTTTGCGGCGCAGGCGGAGCCCCAGGCGCTGTATGACGAT
GTGGAGAAGGTCCTTCAGATCGTGCAGACTGCCGCCTTGATGGAGGTGTG
TTAAACAGGGGTGGTGTAGGCATGGTACTGTTTTAGGGGTCGTCTAATTT
GTTTTCAGCCTCTAGTTTTCTGCCTCCTATACCTTATATCGCACATGTCC
ACACGCACACACAGTTGCCAGACTGCAGAACTGTTCCAACATTCCCACTT
TACAGCCAGTAGTCTACAGTATACCAATAGGTAGTGTGTGTGTGTGTGTG
TGTCTTTTCTTCCCATTTATTCTGGACATCAAGTTCGTTGGACGTACCAG
CCGATGTCACACAGGAGGAAGGCCACACAGGATTTCTCAACTGCCTTCCT
TCTCCGATGCGTGCCTTAATTTTTTTCGCGAGAAGGATTCAGCCGTTCCT
TTCCCTCGTCGACCGTGAAGTCCAATTTTGTGTACTATTTAACGATTTGA
TCGTTCTCCACTTGTAGGGCATTTTTTTTTTTTTTTTTTAGCGAGAAAAA
ATCCCGTTTGCCAAAATTCGAACTCACGTCCCAGCGTGTCAGAAGGTTAC
GAGGTTACTATTAATATCGATTTAATCGTTCTCCACTTGTGGGGCATTTT
TTTTTTTTTTTTTAGTGAGGAAAAATCCCGTTTACCGGGATTCGAACTCA
TGTCCCAGCGTGTCAGAAGGTTACGAGGTTACCTCTGAGCTACCAGGGCG
AGCATCTGGGAAAGAGGGGTGCATATTAATTGGTTCATGATGATCCGCCA
AGGCGCCACCCGTTTGGAACTACCTTGTATGGTCACACATATAGCAAGAG
TATGGATCAACCTGTTAAGGTTGCCAATCCTGCTCGTGGTCAGCTAAACA
GAGAAAATAATATTCCCCTGTCCGCGTTCGCGCCTGGGAATTTGGTCTCG
CGAGACGGTTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATAC
TCAGGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGGC
GGCGTCCATATATTAATATTAAACCGCCATACGCCATCGGGTCAGTCCCG
AGTAAATCGGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCGAGAAT
CCGCCGGCACAGGGCCAGCATACCTCAAGGTAGTTTCGAACGAGTGCTGC
CTTCGCAGGTCACTATGGACCAATTAATATACGCCTTTCTTTCCCACACC
CACTATTGGTTATGAAGTGGGCATGTTGAAAGTAACGATACACTGGCCCC
GTGCCAGCGGACTCTCGGCAATGAACCCCATCAGTACGCAACTGCGCAAC
CCGATAAAGTCGGGACTGACCCGATGGCGTTAGGCGGTTTAAATATTTTA
TACTGTAAAGCAGACTACGAGCGGGATTGGCCACCGTGTAAAGTACCGTA
GTTCTGGTTTTTTCGGGTTTGCAACCAATGCGCTGAATGTGAGAAACAAC
AACAACTGTAACTGGACGCCGCCGTAGAACTCGGGAGGAATCCCTTGAGG
AAGCACCAGGTTCAGCCTGAGCATGGAGATGAGCAGGCTTACGCGGGACG
GGATTGCCGAACCCGTCTCGCGAGACCAAATTCTCAGTTGCGAACGTAGA
CAGGGAAACACCATTTCACTGTTCAGCTGACCACTTGCTGTATTGGCAAC
CTTACCCGGTTGTTCCATACACTTGATATACTGTATGCGTGACCATATAT
GTGTGACCATACATACTTGCACAAGAGAGTGGGTATGGGAAAAGGGAGAG
GCGAACATAATTGGTGCATTTACTAACGCCGGTACTTTCAACATGCCCAC
TTCATACCAATAGTGGGGGTGGGAAAGAGAGGCGCAGATTAATTGGTCCA
TGGTGATCTGCCAAGGCAGCACCCGTTCGGAACTAGTTTGAGATTTACTG
GTCCTGTGCCGGTGGACTCTCGGCAGTGAACGCCATCGATATGCAATTGC
GTGACCCGATAAACTCGGGACTTACCCGATGGCGTACGGCGGTTTCATAA
ATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTAAGCACCAGAT
TCAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGGGACGGCTGAA
CCCGTCCCGCGAGACCAAACTCTCAGGCACGCACGGGGACAGGGGAATAT
CATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTAACCGGTT
GATCCATACTCTGCGATATGTGATGACCATACATTACCTGTGTACAAAGT
GATATAGCACCTGAAAAGCCAAAACCCGTTACTGGAACTACTTTGAGAAC
GGCTGACTGACCCTGGGGTGCCGTTGGCCTCTCAACACCATCGGTACGCA
TATGCGCGACCTGATAAACTCGGGACTGACCCGATGGCGGTTGGATGTAC
TTTATACATTTGTGGACGCCATCGTGGAAAGCGGGAGGAATCCCGTGAGT
AATCTCCAGATTTAATCTCCTGAGTATGGAGATGAGCAGGCTGACGCTGG
ACGGGACTGCCGAAACCGTCTCGCGAGACCAAATTCCCAGGCGCGAACGC
GGACAGGGGAATATTATTTTCTCTGTTTAGCTGACCACGAGCAGGATTGG
CAACCTTAACAGGTTGATCCATACTCTTGCTATATGTGTGACCATACAAG
GTAGTTCCAAACGGGTGGCGCCTTGGCGGATCATCATGAACCAATTAATA
TGCACCCCTCTTTCCCAGATGCTCGCCCTGTGCCGGCGGTGAACTTCTCT
CGCGAGACCAAATTCTCAGGCGCGAACGGGGACAGGGAACAACTTTTTTT
CCTGGTTCAGCTGGCCACGAACAGGGTCGGCAGCCTTACCCGGTGGGTCC
AAATTCTGCTATTAGTGATGCCCATTCTGTCCATACACACTCTACAAGCA
GTACCTCCTTCTATATAACTTTGTCCCTGGCTGGGGGATGCTCAGAAGGC
CTACTTGTAGGCGCTTTCATTTTTTCCTTTAAACTACTGTATTAATGTTA
ATATGGAAAAAAAAAAGTTTCAAATGAAAAAAAAAATGTCCAACAAATGT
AGAACGATTAAATCGTTAGTAGACAAAATTCGACGTCACGGTCGACGAGG
GAAAGGAACGGCTGAATCCTTCTCGCGAGAAACTCAAGGCACGCACCGCA
GAAGGTGGATGAGAAATCATGTGTGACCTTCCTCCTGTGTGACCCCGGCT
GGTACAGTACGTCCAACGAACTTGATGTCCAAAATATATGGGAAGAAAAC
ACACTCACACGCAAGGCGCCTGGAAAAGATGTGCAGCATATCAAACAGTC
TGGAAAAAAATAAAGAGAAAAAAAACATATCGCACTCTTTTAAGTGCGCA
CGGAAAAGATGTGCAGCACATCAGACAGCCTTCTCTGTAGCACTCAGATT
CTGAAATACTGGCGGCACTCCAAACAGTGTATGTACAGTATGTATGTAAA
TATGGTCATCGCGTATACATAGTCATTACACGTAGCAGAGTATGGATCAA
CCCGGTAAGGTTGCCTAGACGCTGTAGTTCGTACCCGACGGGATCGTCCT
TGTAAGTTAGATGCGCTAAACCATTAGACAACTCAGTCGCGTAACTGAGC
AGTCTCATGGTTTAGCCCTTCCTCTTCTGAGACGCGGATATATTTCCGAG
GTTCTCGGATGGTTGGAGGATTTGGTCGCACTATGATCCTTGTTGGTTTG
AGAATATGGATGTATGTACACGCATACGTACCAATTTGTGCATCAACGGG
GGAGGCTGCCAACCCTGCTCGTGGTCATCTGAACAGAGTTTTTTTTCCAC
CCCTGTTCCTGTTCGCGCCTGAGAATTTGGTCTCGCGAAACAGATTCGGC
CGCCCAGTCGAGTTACGGGCGGTCACACCATGATGTATGGTCATCACATA
TACCAGTAGCAAGAGTATGGATCAACCGGGTAAGGTTGTGCCAATCCTGC
TCGTGGTCAGCTGAACAGGGAAAATGGATATTTCCCTGTCCCCGTTCGCG
CCTGAGCAGGATTAGCAGCCATGTCTGCCGATCGGTTACTATACACACAC
AATACGCTGAATGTGCGAATGGTTACTTCCGATACTTCTTGTTGTATGTA
TCACCTCCATGCCATTTAGTGGGTGTGGGTAGAGAGAGGCGCATTGAAAT
TGGCCCGTGGTGAAGCCTGAAAAGGCAGCAGCACCCGTTACTGGAGAACC
TCCTTGAGGTTTACTGGCCTTGTGCCCGGCGGACTCTCGGCAGTGAACGC
CATCGTTACGCAATTTGCGTCACCCGATCAACTCGAGACTGACCCGATGG
CGAGTGGCGGTTTCATAAATGGGCGCCGCCGCGGAACTCGGGAGGAATCC
CGTAAGTAAGCACCAGATTCAGCCTGAGTATGGAGACGAGCAGGCTGACG
CGGGACGGGAAGGCTGAACCCGTCTCGCGAGACCAAATTCGCAGGCACGC
ACGGAGACAGGGAAATATTCATTTTTCCCTGTTCAGCTGACCACGAGCAG
GATTGACAACCTTACCCGGTTGATCCATACTCTGCTACATGTGATGACCA
TTACGATAGACTTCGATTCACCAATGCTTGAACCCGAAACCAAACCAAGT
GTAACATAACTGAGTTGTCTCTTTTGGTTCAGTGTGCGATGTCATGCCTG
CGTAAACATTATGAAAGTGTACAGTACAATATAACGGTGGGTTCCTCCCC
GGTGTTTTCACTACCCAATCGTTGACTATTCCTCATTGGGAACCCAATCA
AATCCTATGAACACATTCTTCTGTCCTTGCAGCATGTTTTTTCACCTAAA
CGTTTGGACAATTTTTCCCCCTGCCCCGATTGGGTGTGTGTTTGCTCAGA
AGATTTCACAGATGCGTTCAGATTTTCCTCTCAAAATTCTGCACGGAATT
TGAGTTCCGATAAGAGTGGTCTCGTAGGTAACCCAAAATTTCAATTTCGA
ATTTTACCTTCGGCTGCTATATAGCAGAGCTCTACGTGAACAGCAATCCT
ATCTGCAGTAAAATCGTTACCGTGGGTATTCTACCCCCCATTTTATTGGC
TCGTCAAAGGCATGGCTGTTTCCTTTTTAGGTTCATCGTGTGCTGTTGCC
CTCGTTTCGGTTTGCCTGCCTGGCGATTAATGTAAGCGTACAGTTTAACG
GTGGATTTCTCCCCGACACTATACTGTTGACCCTGTGCTACTACCAATTT
GGGAACCTGATTTATTGCCATGAAGGATTTTGTCCTTGCAGCCCATGTTT
GCACCCTACTATTATATCATATACCGCCGGTACTTTCAACATGCCCACTT
CATTAAATATTAGTGGGTGTGGAAAAAGAGGCGAATATTAATTGGTCTAT
AGTGACCTGCCAAGGCAGCACTCGTGCGGAACTACCTTGAGGTTTACTGG
CGCTGTGCCGGCGGACTCTCGGCAGTGAACGCCATCTCGGTACGCATTTG
GGTGACCCGATAAACTCGGTAATGACCCGATGGCGTATGGTGGTTTCAGT
ATTGGACGCCGTCGCGGAACTCAGGGGGTATCCCGTAAGTAAGCACCAGA
TTCAGCCTGAGTATAGAGATGAGCAGGCTGACGCGAGACGGGACGGCTGA
ACCCGTCTCGCGAGACCAAATTCTCACGCAGGTACGGGACAGAGGAATAT
TCATTTTTCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACTCGG
TTGATCCATACTCTGCTATATGTGATGACCATACATACGTACATACATAC
ATGAACGTTCTGACAATCCCCCCCCCACCTGATTGAGTGAACGCTCTATT
ATATCGATATTAATAGAGGTTTGGTAGAGATTAGTTCGGATTTTTTTTTA
TACACATGTAGAATAGTGTTTTCCCATCATGGGGCAGCATTTGCAAAACC
CAACAACTTTGTCGCCGGAGTAATATCAACGATAACAAGCAGTCATGTTA
TAGATAACAAGAGTCACCAAGATGCGGTTGGCATGCATTGCATTGCTCTA
CACGCTACGAGCAAAATAACAGTGTAGCAGCAGGCATTACGGGTTCCCAG
CCAATGAACCACACGGTAGCGCAACTATGCTCCAGCCCGATACTGTACCG
TAGGCGGTAAACGACGCGATGATAATACATGCTGACTTGGTGGTCTGGGT
GCCGTCTACGCTCTCTGAAGTTGCTGCTGGCGTGTGTGTGGATGCGACTA
TTGATACTGCTAGTATTGCTGCTGCCGGCCGGAAGCGGCGCAGGCGATTG
GCGACTTGGGAGGCTAAAAGGCATAATCTTTGTCGTCGCTGCTGGAAGAC
ATGCCGCCTTGGGCACCGAGGACGGGCTTAGCGATGCTATATACTACTTG
TACTGTTAGTACCCACCTCTTTCATCAAGTCGCGCCGCAGTCAATGAAAG
TCCCACCCCAGTCAAGGGCAAAAAATAGTCCGGATGTGTTCTGAGAGGAG
CATCCATCGTATGGCATCGATATCGCTACGAGGAGGCGGAAACAAGAGAG
CGCTACTTGTAGCACACCGCCAAGCACCCAGACGCCTCCACCACAAGCAA
ACCCGAGTCCTCTGAAGATTGGGCTACTTGTAGCGCATCTCGATCACCGG
GCTTTTCTTCAAGCGCCACCACGCCTGGTCGAATCGCTTCAGATCAAGGC
GAGGTCCCCGCGGTTGTGCGATGCACCTGACGATGCCACCACAAGTGCGA
CAGCCGTCCAGCCTTCAACGCCCATATTTCCGCCCGCCAAAGTAGTGTCC
ACGTTCCAAGTCTTGTCCCTCTACCAGAGTGGGTGTCTGTCCCGCGGGGA
TGGGTTATCGAGAATATCTTGCGTAGTCGGGAGTCGTAATATATTACCTT
TAGGGGCGTGAAAACGCCTTCCAGGATTTGGCGCACAGATTTTCCACCAA
ACAGCACCAGACGGCCGTTTTGTCGCCACATAAAAGAGTATGGATCAACC
GGGTAAGGTTGCTAACCCTGCTCGTGTTCAGCTGAAGAGGGAGAATGCAC
ATTTCCCTGTCCTCGTTTACGCCTGAGAATTTGGTCTAGCGAGACGGGTT
CGGCCGTCCCGTCCCGCATCAGCCTGCTCATTCTCCATACTCAGGCTGAA
TCTGGTGCGTACTCACGGAATTCCTCCCAATTTCCGCGGCAGTGTCTAAT
CATTTATTTAAACCGTCATACGCCATCGGGTCAGTCCCGCGTTTATCGGG
TGACGCAATTGCGTACCGATGGCGTTCACTGCCGAGAGTCCGCCGGCACA
AGGCTAGTAGCCCTCAAGGTAGTTCCAGTAACGGGGGTGCTGGCATTTTG
CAGGTCACCATGGTCCAATTACTGTGGGCCTCTCCTTTTCGCACGCCCAC
TATACTATTGTTGGTATGAAACGGCTATATTAATAGCTTGTTGAAAATAT
TGGCATGAGAGTGGTAGCAGATATGCAGAACCAACTATAGTGAATAATGT
GGTTGGAAGTCGGGTATTTAGGAAGTTGTTGCCTCTTGCGATAGGGCTTC
AATCATGTATCAAATAGAAGTAACCCCAGTTGACTGTGCTTGAAAGAAAA
ATGAATTTTCAACTGAAGCACACACACACACAGGGCGGCGTCTTCGACTG
GCATAAAAATGATAAGCACACGAGAGGACGGCCGATTACGTACTAGTTCA
AAACACAAAACACAGAGAATTCCCGACCCGCTTTAGAAATCGACGAAGCT
CCGTTCGTTTCGGCTTTTAGTTGCGCTACTATCAATAAACAACGTTTTGA
CATTTGTCTACGCAATGGCGCGCGTCGATTCTCGTTTCTAACGCCCTTGA
GGGTTTGGTTGTGTACCCCAAGCGTGAAAAATAAGAGTATTTAAAAAGAA
AAACTAGAACGCGCCTATACCTTCTGAGCATCCTCCATTCAGAAGAAAAT
TTGTCAAAACGTTTGGGTGGGATCAAAGGCTGCAAATACAAAACCCCTTC
ATGGCATTTGAACGGATTCCCCTATGGTAGTAACATTGGGTTGACAGTAT
AATGTCGGGGAGAAGCTCACCGTTAAACTGTGCATTTCCATTAATCGCCA
TGCAGGGACACCAGAAAAACAGCAACGAGCAAAAACAATGTAGTGACTCA
TCAAACATGGTAGTGATAATATACTTATTACTTACCAGGTAGGCTATTAA
GGACGACAACACTACATACGAAGTACCGTAGTATTTAAACGGGTTTTCCG
ATAGTAGTAACCATGGGTCAAGAGTATAATATCGGGGGGAAGCCCACCGT
TATACTGTACACTTATATTAATCGCCATGCAAAGCCTTTAAACATGACAA
AACATGGGGCAACCATGGCATTGTCGGGGAGAGACATATCATTAGCAGTA
TAATCGTAACACGTTTTTTATTAGTGTACAAATAGTACAATACACAGTGC
AGTACCCAAGGCCACTAAATGGTATTAATCGCCATCTGGATCATCATCTG
TCAAAACACAACACAACAAAGTATACTATAGTACCAGGTACATAATTAAG
AGGGTAGTCTGCAGTAATAATATACGATAATAGTGCCCCAACCCATACGC
AAAATAGGGGCTTGGGCCAAGATTAACCTGTCCGGGAGACACGCTACATG
ATACTTGTAGTGCCAATTACATTGATTGTTCTACCCGGACACCAAACAAA
CCAACCACCAAACTAGGCTTGGATTACAACTCACTTTATTACATTACGTC
TAGGCTCGGATAGGTGTATACATTTAGGTGGGATCAAAGGCTGTAAATAC
GAAACCTCTTCATGGCATTTAAACGGGTTCCCCTATGGTAGTAACATTGG
GTCGACAGTATAATATTGGGGAGAAGCCCACCGTTATACTGTACACTTAC
ATTAGTCGCCATGCAGGGACACCAGAAAAACAGCATAAAACAAAAACAAT
GTAGTGCATCATCAAACATGGTAGTGATAAATTACTATTACATGAGCTGT
AAATACGAAGACACTATATGGTATTATTAATCGCCATGCAGAGCCTTCGA
ACATAACAAGGCATGGGGCAACCGTAAATTATCGGGGAGATGTCTATCTT
TATACTATGTGTGTGTGTCTGTGTGTGTGTGTGTGTTTTCTTCCCATCCA
TTCTGGACATCAATGGACGTACCAGCCGGGGTCACACAGGAGGAAGGTCA
CACCGGATTTCTCATCCACCTTCCTTCTGCGGTGCGTGCCTTAATTTTTA
TCGCGAGAAGGGTACACAGCCATTCCTTTCCCTCGTCGACAGTCGACCGT
GAAGTCGCATTTTGTGTACTAACGAATTAATCGTTCACCGCCCGTTGGGC
ATTCTTATTTTAGTGTTTTAGTTTTTAGTGAGAAAAATCCCGTTTGCCGG
GATCGAACTCACGTCCCAACGTGTCAGAAGGTTACGAGGTACCTCTGAGC
TACTGGGGCGACCGGCCTACTATACGATACAAGTATATAGAGCAGACGTG
AGCATAGAAGATTGTCCAAATTAACATCCGAACTCGCCATGCCTGACGTG
TTCATAGAAGTATAAAGCCATGCGCCCGAAGACGATGGATACACGACTGC
GTTAGCTCGAGGGGAGAAAAAAATAACGCAAGCGTCCGCCGAGCTTCCCC
GGCCCCCCCACCCCCCTCCCTCCGCCGCCGCCTTAAATGAAAGCTTCTCT
CAAAATTCTGCAGGGCGGCAGCACGGGAACGGGCCTCAAACTTTCCACGA
TTTAAGGCTAAAAAGCTCAAAATGCCTGCGTGTCGATTATTGGTGACACG
CTGGGACAGAGAAAGAGGGGTTTATTTCTATACGCGCCGATTCGCGCTGT
AACAAGAATACATAGCTGTTTTTTTTTCCGTGAGCGCGGGTTTGCGACAA
ACCACATTCTCGCCAGCGAGCGCGGAGAAGATTTTGCGATGCAATCGGTA
ATGAAAGTTTACTGCGGTGGGCACGCAAAGCTAACCATGTCAAAACGATT
CCGAGGTTTCGACCTTAGAGCGGTGCGCACCTTATTCTAGCCGTGGGAGC
CTGGAAGCCTTCCGGCCTTTTTGAGTCGATTTCCAACGCGCGCATATTTT
TTCATCTACAGGACCTCTGATGCTTTTCCCGAGATCGTGGGTCACTACGT
TTTTCGAGCAAAGTTTAGAGACCGTCCGGGGACGATCGAGAATCGATTCA
GAATGTGTCCGCAGGGTATATTTATATTCCAAATCGTGATGATGTTGCTG
TACGGATTGTTTTTTTCTTCTTCATTTTTTCCGCGTTGGGAAAAAAAATA
CACAACGAAAGACTAGTGATCCCGATTCCGTACAATTTTCTTTTTCGCAT
ACGAAGGGGGTGGGGGGAAGGGAGTTCCAATCCAACTTCGGAAGAAAGAA
AAAAAACAATCAAAAAAACTTGTCCTTACACGAAAACCTCATCAATATCG
TACGGACAGTAGAGTAGTCGAGTAGGAATCGCTTAACGTTTTTTGTTTTT
TGTTTTTAATCTCCTACTTTAAAAAAAGCTGTTTTGGATACTCACTAGAA
GTGACTCCCACTTGTATCAAAAGTATCCTAGACGCCGAAAACCAAAGCAC
TGCACCACGCCAGTGAGGAGTTACACCCCTCTTGACAAAATGACTCCCTG
CAACAGCGAGGCCAGAAGAATATTGCTCATATTGGCTGCTGTAGTATGGA
GGGGGTAGTGGAAACGGAGCGCAAGCCGGGTAAGTGATCGGCGGGAGGAC
TTGCTCGGTGCTGAGCGCGCGCAGGCAGGCATTGGACCGATTTCTATCGC
TTCCCTTCGTTCGGGCGGGTGTTGTCGTGTCAATCGCGAGCGAGCGTTGT
AGACTACGTGGTGTACTGCACGGCATGGGGTAAGCCGTAGAGCTGGAGCT
TGCTCTAACCGTCTCGTGCGCTCTGTGTTCTGTCTCCGCCAGCTTGAGAG
CCGGAGTTAGCAGGCGCTGCGGCAGGGCAGATACCGCAAAACGCAAAATA
TGAGATGGCGCGCAACACCAATCTTTTGTGAATGTCCACCCGCTACATGA
AGCCGCAGAACCCACCCTCTATGCCACGTTTCGCGCGACCCCACCGCGTC
GTTTAGAATCCACAGCCCCCTTCTGGACGCTCGATCCTCGCTTATAGTTG
TTTGTCCGCGCTCGTCGCCGGCATGGCGGTGGTTTTTGCTTGAATTTGGT
CGTCCACGGCGCGTGAGGCCGAACGCTTGCCAGGCCATTGTGACCCCGAC
CTAACGTCGCGGCTGTGCGCCCCCCATTCCCCCCCCCCTCCCGTCGCGTG
CGTGTAATCAAGGTGCTCCATGCTCTTTTTGGAGTCGTCCGGTCGCCGTG
GTTGACGACGATGTTTCAGGTGGCCTCGAGGTTGATACTTGTGTGGGCCT
TCTTGTGGGCGGTGCCTAGCACTCAGGCGCAAATCGGCGCGGTCCTCTGC
ATCACGAGCTGGGCGGCCGTTGAGATACCAAGGTGATGGAACAAAGCGTG
CCGTGGATGTCATTGTTGGGATGGGATGATGATGGCGATGTCCCCTTACT
CCCAAGCTTTTCCCCCCTCGGAGTTCCAGGTAGATGTATCTGCTTCAGAG
CGTCGCGCAAGGACAACAAAACAAATATTTTAACGTTGGGCTTGGACCCC
AGCTGTTACCGTAAAAAGGTGGAAGATCTTCCGACCTTCGTCGTAGTGGC
GATGTTGATTGGCCTCGCGTGACGGCGCACTCTCTTTGACAGCGTGCACG
GTGTTGTAAGATAAAAACGCTCGCGATGATGAACGAGAGACGCGTTCCCT
GGTAACAGAGAAGTGAGCTCAATGGCTTTCTGGCTTGACGCCGGAGTCAC
GTAACACACGTCGTTACCTATCTCATCACGACCATTTTCAGGTACCTGTT
CTACGCCAGCGGCGTCCTGGGGTCCTGCCCGTATGCGCTCTTCTACCTCC
GGTACTCTCTCTTCTTCGTGCTTTATCCTACGGGGATTGCGGGGGAGGTT
ATGACCGTGTTGGCCGCTCTGCCTGAGCTTGAGGTAAATAGCATGTAGTC
ACGTACGCATATCGGGGGGGGTGTTAAGGGTGTAAGTATTCCACTCGGCG
ATTACCAGCGCAACGGCCTCTGCTTGGTACGACATATGAAGGGCCCCAAA
GTCGGAGCATTTTTGCGCAGTGTAGTATACAGAGCTTAGTGTATACATCT
AGTCACGAACCCGCTAGTCCGTCAAGTCTATTCTGAAATGATCCATGTCA
TTTCGGGGACGTGGCGCGCCCTGTTTACGCGGGTGTACCGAATTCGTCAC
GAAAATACTAAAAACTACAAAGTATAGTAGTATAATATTGCTGTTTCCTA
CAAGACTCTCTATAGAGTACGAGCAGTCAGATTTCCGTTTAATCGTTCCT
TGGCATTTGACGCTTTTTTTTCCCCGTCCCTCTCCCTGGGTACAGGTACA
AAAGATAATCCTCACAGTCGTGGGGCGGGCACTCAATCATATGCAACCAG
TCTATATATACGAAAGCCACTCTCCTCCGGCCCTTGCGATATCTGCGTGT
TCTGGTGTCGATCTTTCCAGGATTCCAAGGACTCGCTGTCACTCGGTGTT
GGACCCGTTCGCGTCTCGGGGTACCTCGCCTCGATAGCTCTTCTTCTCCT
TTACGTGCCCATAGGACCCTTTCTATACATGTACATGGTGGGAAACAGGC
GGATCGCGTTCAAGAAGCGACAGGCAATCTCCGACAAGAAGATCAAGCCG
CAGTGATCTTATCAAGAGGGTCGTTTTCCGTCTATGAGATATGGCCGTGC
GGTTGTGTTACGTCATTATCAGTCGTTTGCATATTGATTTGATGACTATA
GGAAGCATATTGAGGGCGCGGTGTGGAGATAGCATCCGACAGCAGGAATA
GATTGGTGGAAAAATCGAAAATAAAAGCCAATCGAATGCTTGCGGCAGAC
CCGGATAACCCGTCAGCTACGGTCCAAGCGTCCGGCGTTGCAAATGGACC
GCGCAGTGCAATGGTTCACAAGATAGGTGAATTGAACGTTCTACTAGTTT
TACTATACCTTGGGGGAAAATGCGGTATTCATCCTTTTTCAAAGGCAGCG
AACGAGGCTTCAGCAAAAATGCTTGTGATAGACTCGGAGAACCCTCAAGC
TACCTGTACAAATTAATTTGTAGATGTTTCAAATCGATTCTGTGGCTCAA
GAAGATGGTTTATTTTTTTTGTTTGGTTCTTATTTTTTTGTTT back to topCoding sequence (CDS) from alignment at F-serratus_M_contig101:269360..282952- >mRNA_F-serratus_M_contig101.199.1 ID=mRNA_F-serratus_M_contig101.199.1|Name=mRNA_F-serratus_M_contig101.199.1|organism=Fucus serratus male|type=CDS|length=1344bp|location=Sequence derived from alignment at F-serratus_M_contig101:269360..282952- (Fucus serratus male) ATGACGTCGATTAAGAAATTGTATCTGGTGAGTTACAACTTGGCGTGTGC CACGGGTTGGGGCTTCGTCCTCTTCTTATGTCTGAAGAATTTTGCGGCGC AGGCGGAGCCCCAGGCGCTGTATGACGATGTGGAGAAGGTCCTTCAGATC GTGCAGACTGCCGCCTTGATGGAGATGACGTCGATTAAGAAATTGTATCT GGTGAGTTACAACTTGGCGTGTGCCACGGGTTGGGGCTTCGTCCTCTTCT TATGTCTGAAGAATTTTGCGGCGCAGGCGGAGCCCCAGGCGCTGTATGAC GATGTGGAGAAGGTCCTTCAGATCGTGCAGACTGCCGCCTTGATGGAGGT GCTCCATGCTCTTTTTGGAGTCGTCCGGTCGCCGTGGTTGACGACGATGT TTCAGGTGGCCTCGAGGTTGATACTTGTGTGGGCCTTCTTGTGGGCGGTG CCTAGCACTCAGGCGCAAATCGGCGCGGTCCTCTGCATCACGAGCTGGGC GGCCGTTGAGATACCAAGGTGCTCCATGCTCTTTTTGGAGTCGTCCGGTC GCCGTGGTTGACGACGATGTTTCAGGTGGCCTCGAGGTTGATACTTGTGT GGGCCTTCTTGTGGGCGGTGCCTAGCACTCAGGCGCAAATCGGCGCGGTC CTCTGCATCACGAGCTGGGCGGCCGTTGAGATACCAAGGTACCTGTTCTA CGCCAGCGGCGTCCTGGGGTCCTGCCCGTATGCGCTCTTCTACCTCCGGT ACTCTCTCTTCTTCGTGCTTTATCCTACGGGGATTGCGGGGGAGGTTATG ACCGTGTTGGCCGCTCTGCCTGAGCTTGAGGTACCTGTTCTACGCCAGCG GCGTCCTGGGGTCCTGCCCGTATGCGCTCTTCTACCTCCGGTACTCTCTC TTCTTCGTGCTTTATCCTACGGGGATTGCGGGGGAGGTTATGACCGTGTT GGCCGCTCTGCCTGAGCTTGAGGATTCCAAGGACTCGCTGTCACTCGGTG TTGGACCCGTTCGCGTCTCGGGGTACCTCGCCTCGATAGCTCTTCTTCTC CTTTACGTGCCCATAGGACCCTTTCTATACATGTACATGGTGGGAAACAG GCGGATCGCGTTCAAGAAGCGACAGGCAATCTCCGACAAGAAGATCAAGC CGCAGTGAGATTCCAAGGACTCGCTGTCACTCGGTGTTGGACCCGTTCGC GTCTCGGGGTACCTCGCCTCGATAGCTCTTCTTCTCCTTTACGTGCCCAT AGGACCCTTTCTATACATGTACATGGTGGGAAACAGGCGGATCGCGTTCA AGAAGCGACAGGCAATCTCCGACAAGAAGATCAAGCCGCAGTGA back to top
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