mRNA_F-serratus_M_contig101.198.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A2N1NP55_9GLOM (WD40 repeat-like protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2N1NP55_9GLOM) HSP 1 Score: 149 bits (375), Expect = 1.720e-36 Identity = 90/259 (34.75%), Postives = 139/259 (53.67%), Query Frame = 1 Query: 106 VERTN-TVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRG----PDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAAG 867 +E TN ++ D P + +R +R + + F L++TL H+ S+TA++F+ DG RLIS G D ++ + P + +S + T++ +D+D TN Y+ TV ++RL++++I +GK+VR+YK + TP + AQ G L KI LDP G++A DK IRLFDF +G L V GHSEL TGV+FTPD R++S DG + VW++S +L MR + + G Sbjct: 602 IEFTNGSLPDSPYLIATASR-DRILHVFDIKNNFRLIQTLDDHSSSITAIKFTNDGGRLISCGADKSIIFRSRQNNGGFPCYVTYHNIS-GRSTVFDMDIDITNKYISTVSGERRLNVFHIDTGKNVRSYKSD---TPEEVNAQE------------------------GSLIKISLDPGGVHAVTGGSDKSIRLFDFSNGNILGKVLGHSELITGVKFTPDCERVISTSADGCIFVWKVSDELVTKMRQKFLDRSGVG 831
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A015J4D6_RHIIW (Dip2p n=8 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015J4D6_RHIIW) HSP 1 Score: 149 bits (375), Expect = 2.160e-36 Identity = 90/259 (34.75%), Postives = 139/259 (53.67%), Query Frame = 1 Query: 106 VERTN-TVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRG----PDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAAG 867 +E TN ++ D P + +R +R + + F L++TL H+ S+TA++F+ DG RLIS G D ++ + P + +S + T++ +D+D TN Y+ TV ++RL++++I +GK+VR+YK + TP + AQ G L KI LDP G++A DK IRLFDF +G L V GHSEL TGV+FTPD R++S DG + VW++S +L MR + + G Sbjct: 589 IEFTNGSLPDSPYLIATASR-DRILHVFDIKNNFRLIQTLDDHSSSITAIKFTNDGGRLISCGADKSIIFRSRQNNGGVPCYVTYHNIS-GRSTVFDMDIDITNKYISTVSGERRLNVFHIDTGKNVRSYKSD---TPEEVNAQE------------------------GSLIKISLDPGGVHAVTGGSDKSIRLFDFSNGNILGKVLGHSELITGVKFTPDCERVISTSADGCIFVWKVSDELVTKMRQKFLDRSGVG 818
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A482UGK1_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UGK1_9ARCH) HSP 1 Score: 148 bits (374), Expect = 2.620e-36 Identity = 80/239 (33.47%), Postives = 133/239 (55.65%), Query Frame = 1 Query: 181 AAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGD-NVLVLNKVRGPD-----IQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAAGGGQA 879 A + P+ +V TL H +T+++FSK+ +LI+AGGD ++L + P + + KAVS G +YG+ VD N +VTVGQD+R+++W + + + +R++K + + G EL ++ DP+G++ A S D+ +R+ DF++G CLA +GHSE +G+ FTPD RRL+++ GDG + VW LS + ++M+DR+ E+ A G A Sbjct: 669 AMAASHPYDVVTTLADHGAGLTSLQFSKNDNQLIAAGGDGSILFYSLSANPSSGEVSVDKAKAVSQGTGAVYGMAVDCANKTLVTVGQDRRVNVWAMRNRRFMRSFKAD---------------------------------DDGKELHRVVFDPSGLFVATASIDRVLRIHDFFTGHCLARTTGHSEAISGMVFTPDCRRLITVSGDGCIFVWHLSAVIIKSMQDRLREIGRARAGAA 874
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A2R6WBU6_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WBU6_MARPO) HSP 1 Score: 148 bits (373), Expect = 3.840e-36 Identity = 90/288 (31.25%), Postives = 142/288 (49.31%), Query Frame = 1 Query: 10 RDGLVRVFDASSAASLDGPESPGFRL------GGREGEVERTNTVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKV----RGPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDR 843 R G +RV+D + + E+ + E ++ N + P + G R +R + V R + +++TL H+ S+TAV+F +G +L+S D +V V G R+ P+GTIY LDVD + +VVTVGQDK++++ N+ASGK VR +K EG GE K+ DP+G Y DK +R+++F +G+ +A +GH+E+ TGV F PD +RLVS+ GD + VW+L + + M+ R Sbjct: 503 RSGNLRVYDLETMKLISFQEAHDAEILSLSFTAVMEDKIPAKNEDFEPPLLLASGGR-DRLIHVYDVRRDYDVIETLDDHSASITAVKFRCNGSKLLSCSADKSVVFRNVVSSPTGCKSVRYHQEVAPRGTIYDLDVDTSEKFVVTVGQDKKINVLNLASGKPVRCFKPEGD---------------------------------AGEAIKVQFDPSGAYVVCSHTDKCLRIYEFSTGELIAQAAGHAEVITGVTFMPDCQRLVSVSGDSCIFVWKLPVGMTRAMKKR 756
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A176VI37_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VI37_MARPO) HSP 1 Score: 148 bits (373), Expect = 4.030e-36 Identity = 90/288 (31.25%), Postives = 142/288 (49.31%), Query Frame = 1 Query: 10 RDGLVRVFDASSAASLDGPESPGFRL------GGREGEVERTNTVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKV----RGPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDR 843 R G +RV+D + + E+ + E ++ N + P + G R +R + V R + +++TL H+ S+TAV+F +G +L+S D +V V G R+ P+GTIY LDVD + +VVTVGQDK++++ N+ASGK VR +K EG GE K+ DP+G Y DK +R+++F +G+ +A +GH+E+ TGV F PD +RLVS+ GD + VW+L + + M+ R Sbjct: 503 RSGNLRVYDLETMKLISFQEAHDAEILSLSFTAVMEDKIPAKNEDFEPPLLLASGGR-DRLIHVYDVRRDYDVIETLDDHSASITAVKFRCNGSKLLSCSADKSVVFRNVVSSPTGCKSVRYHQEVAPRGTIYDLDVDTSEKFVVTVGQDKKINVLNLASGKPVRCFKPEGD---------------------------------AGEAIKVQFDPSGAYVVCSHTDKCLRIYEFSTGELIAQAAGHAEVITGVTFMPDCQRLVSVSGDSCIFVWKLPVGMTRAMKKR 756
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A2Z6QZV5_9GLOM (Mitogen-activated protein kinase-binding protein 1 isoform X1 n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QZV5_9GLOM) HSP 1 Score: 147 bits (371), Expect = 7.360e-36 Identity = 90/259 (34.75%), Postives = 138/259 (53.28%), Query Frame = 1 Query: 106 VERTN-TVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRG----PDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAAG 867 +E TN + D P + +R +R + + F L++TL H+ S+TA++F+ DG RLIS G D ++ + P + +S + T++ +D+D +N Y+ TV ++RL+++ I +GK+VR+YK + TP + AQ G L KI LDP G++A DK IRLFDF +G L V GHSEL TGV+FTPD R++S DG + VW++S +L MR + + AG Sbjct: 603 IEFTNGCLPDSPYLIATASR-DRILHVFDINNNFRLIQTLDDHSSSITAIKFTNDGGRLISCGADKSIIFRSRQNNGGFPYYVTYHNIS-GRSTVFDMDIDISNKYIATVSGERRLNVYQIDTGKNVRSYKSD---TPEEVNAQDQ-----------------------GSLIKISLDPGGVHAVTGGSDKSIRLFDFSNGNILNKVLGHSELITGVKFTPDCERVISTSADGCIFVWKVSDELVTKMRQKFLDRSGAG 833
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A2I1FVK5_9GLOM (WD40 repeat-like protein (Fragment) n=5 Tax=Rhizophagus TaxID=1129544 RepID=A0A2I1FVK5_9GLOM) HSP 1 Score: 145 bits (367), Expect = 9.390e-36 Identity = 88/248 (35.48%), Postives = 135/248 (54.44%), Query Frame = 1 Query: 106 VERTN-TVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRG----PDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTM 834 +E TN ++ D P + +R +R + + F L++TL H+ S+TA++F+ DG RLIS G D ++ + P + +S + T++ +D+D TN Y+ TV ++RL++++I +GK+VR+YK + TP + AQ G L KI LDP G++A DK IRLFDF +G L V GHSEL TGV+FTPD R++S DG + VW++S +L M Sbjct: 420 IEFTNGSLPDSPYLIATASR-DRILHVFDIKNNFRLIQTLDDHSSSITAIKFTNDGGRLISCGADKSIIFRSRQNNGGFPCYVTYHNIS-GRSTVFDMDIDITNKYISTVSGERRLNVFHIDTGKNVRSYKSD---TPEEVNAQE------------------------GSLIKISLDPGGVHAVTGGSDKSIRLFDFSNGNILGKVLGHSELITGVKFTPDCERVISTSADGCIFVWKVSDELVTKM 638
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A2K1K2J6_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K2J6_PHYPA) HSP 1 Score: 144 bits (363), Expect = 8.450e-35 Identity = 84/250 (33.60%), Postives = 131/250 (52.40%), Query Frame = 1 Query: 127 QDGPCTRSVGTRS-------ERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVR----GPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDR 843 ++ PC ++ + S +R + V R + +V+TL HT S+T VRF+ +G +L+S D +V V G R+ +GTIY +D+D ++ VVTVGQ+K+L+I ++A+GK VR +K EG GE K+ +DP+G+Y D+ +R+++F +G+ LA SGH+E+ TGV F PD RRL+S+ GD + VWRL +L + MR R Sbjct: 538 ENNPCDTALTSNSLLASGGRDRLIHVYDVNRYYDVVETLDDHTSSITTVRFACNGSKLLSCSADKSVVFRDVAMTKSGCKASRYHQEIATRGTIYDMDIDASDKLVVTVGQEKKLNILSLATGKPVRCFKPEGDV---------------------------------GEPIKVRMDPSGVYVVCSHSDRCMRIYNFITGEPLAEASGHAEVITGVTFLPDCRRLISVSGDSCIFVWRLPINLSRVMRKR 754
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A397T318_9GLOM (WD40-repeat-containing domain protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397T318_9GLOM) HSP 1 Score: 144 bits (362), Expect = 1.150e-34 Identity = 84/245 (34.29%), Postives = 132/245 (53.88%), Query Frame = 1 Query: 121 TVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRG----PDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDR 843 ++ D P + +R +R + + F L++TL H+ S+TA++F+ DG RLIS G D ++ + P + +S + T++ +D+D +N Y+ TV ++RL++++I +GK+VR+YK + TP + Q G L KI LDP G++A DK IRLFDF +G L V GHSEL TGV+FTPD R++S DG + VW++S +L MR + Sbjct: 610 SIPDSPYLIATASR-DRILHVFDINNNFRLIQTLDDHSSSITAIKFTNDGGRLISCGADKSIIFRSRQNSGDFPYYVTYHNIS-GRATVFDMDIDISNRYIATVSGERRLNVFHIDTGKNVRSYKSD---TPDEVNIQDQ-----------------------GSLIKISLDPGGVHAVTGGSDKSIRLFDFSNGNILGKVLGHSELITGVKFTPDCERIISTSADGCIFVWKVSSELVTKMRQK 826
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A482WV20_LAOST (Uncharacterized protein n=2 Tax=Delphacidae TaxID=33362 RepID=A0A482WV20_LAOST) HSP 1 Score: 143 bits (360), Expect = 2.090e-34 Identity = 89/291 (30.58%), Postives = 149/291 (51.20%), Query Frame = 1 Query: 10 RDGLVRVFDASSAASLDGPESPGFRLGGREGEVERT--NTVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRF--SKDGKRLISAGGDNVLVLNKVRGPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAAGG 870 R G +R+ D +S L E+ + E R+ +T + C +R + V + + ++TL H+ S+TAVRF +++ +++S G D ++ +++G R + + T+Y ++VD +++T QD+ + +++I SGKH + +K G+ GE G L K+ LDP+G+ A+ DK + ++D+YSG+CLAT+ GHSELATG+RFT D RRL+S GDG + VW++ DL TM R+ + A G Sbjct: 495 RAGNIRIHDLNSLQQLCLIEAHDAEVLCLEYSQSRSIHDTSDNSSCNFLASASRDRLIHVFDVDQDYNFIQTLDDHSSSITAVRFLNTQNQLQMVSCGADKSIIFRQLQGGQFSRGHNAA-GKTTLYDMEVDCMQKHILTACQDRNIRVYSINSGKHTKTFK-------------------------------GSVGEDG-SLIKVSLDPSGILVASSCTDKTLCIYDYYSGECLATMLGHSELATGLRFTNDCRRLISASGDGCIFVWKVPHDLVVTMHARLSQQAARAG 752 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig101.198.1 >prot_F-serratus_M_contig101.198.1 ID=prot_F-serratus_M_contig101.198.1|Name=mRNA_F-serratus_M_contig101.198.1|organism=Fucus serratus male|type=polypeptide|length=309bp SSGRDGLVRVFDASSAASLDGPESPGFRLGGREGEVERTNTVQDGPCTRSback to top mRNA from alignment at F-serratus_M_contig101:217333..220246- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig101.198.1 ID=mRNA_F-serratus_M_contig101.198.1|Name=mRNA_F-serratus_M_contig101.198.1|organism=Fucus serratus male|type=mRNA|length=2914bp|location=Sequence derived from alignment at F-serratus_M_contig101:217333..220246- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig101:217333..220246- >mRNA_F-serratus_M_contig101.198.1 ID=mRNA_F-serratus_M_contig101.198.1|Name=mRNA_F-serratus_M_contig101.198.1|organism=Fucus serratus male|type=CDS|length=1854bp|location=Sequence derived from alignment at F-serratus_M_contig101:217333..220246- (Fucus serratus male)back to top |