mRNA_F-serratus_M_contig101.198.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig101.198.1
Unique NamemRNA_F-serratus_M_contig101.198.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A2N1NP55_9GLOM (WD40 repeat-like protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2N1NP55_9GLOM)

HSP 1 Score: 149 bits (375), Expect = 1.720e-36
Identity = 90/259 (34.75%), Postives = 139/259 (53.67%), Query Frame = 1
Query:  106 VERTN-TVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRG----PDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAAG 867
            +E TN ++ D P   +  +R +R +    +   F L++TL  H+ S+TA++F+ DG RLIS G D  ++    +     P    +  +S  + T++ +D+D TN Y+ TV  ++RL++++I +GK+VR+YK +   TP  + AQ                         G L KI LDP G++A     DK IRLFDF +G  L  V GHSEL TGV+FTPD  R++S   DG + VW++S +L   MR +  +    G
Sbjct:  602 IEFTNGSLPDSPYLIATASR-DRILHVFDIKNNFRLIQTLDDHSSSITAIKFTNDGGRLISCGADKSIIFRSRQNNGGFPCYVTYHNIS-GRSTVFDMDIDITNKYISTVSGERRLNVFHIDTGKNVRSYKSD---TPEEVNAQE------------------------GSLIKISLDPGGVHAVTGGSDKSIRLFDFSNGNILGKVLGHSELITGVKFTPDCERVISTSADGCIFVWKVSDELVTKMRQKFLDRSGVG 831          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A015J4D6_RHIIW (Dip2p n=8 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015J4D6_RHIIW)

HSP 1 Score: 149 bits (375), Expect = 2.160e-36
Identity = 90/259 (34.75%), Postives = 139/259 (53.67%), Query Frame = 1
Query:  106 VERTN-TVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRG----PDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAAG 867
            +E TN ++ D P   +  +R +R +    +   F L++TL  H+ S+TA++F+ DG RLIS G D  ++    +     P    +  +S  + T++ +D+D TN Y+ TV  ++RL++++I +GK+VR+YK +   TP  + AQ                         G L KI LDP G++A     DK IRLFDF +G  L  V GHSEL TGV+FTPD  R++S   DG + VW++S +L   MR +  +    G
Sbjct:  589 IEFTNGSLPDSPYLIATASR-DRILHVFDIKNNFRLIQTLDDHSSSITAIKFTNDGGRLISCGADKSIIFRSRQNNGGVPCYVTYHNIS-GRSTVFDMDIDITNKYISTVSGERRLNVFHIDTGKNVRSYKSD---TPEEVNAQE------------------------GSLIKISLDPGGVHAVTGGSDKSIRLFDFSNGNILGKVLGHSELITGVKFTPDCERVISTSADGCIFVWKVSDELVTKMRQKFLDRSGVG 818          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A482UGK1_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UGK1_9ARCH)

HSP 1 Score: 148 bits (374), Expect = 2.620e-36
Identity = 80/239 (33.47%), Postives = 133/239 (55.65%), Query Frame = 1
Query:  181 AAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGD-NVLVLNKVRGPD-----IQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAAGGGQA 879
            A   + P+ +V TL  H   +T+++FSK+  +LI+AGGD ++L  +    P      + + KAVS   G +YG+ VD  N  +VTVGQD+R+++W + + + +R++K +                                 + G EL ++  DP+G++ A  S D+ +R+ DF++G CLA  +GHSE  +G+ FTPD RRL+++ GDG + VW LS  + ++M+DR+ E+  A  G A
Sbjct:  669 AMAASHPYDVVTTLADHGAGLTSLQFSKNDNQLIAAGGDGSILFYSLSANPSSGEVSVDKAKAVSQGTGAVYGMAVDCANKTLVTVGQDRRVNVWAMRNRRFMRSFKAD---------------------------------DDGKELHRVVFDPSGLFVATASIDRVLRIHDFFTGHCLARTTGHSEAISGMVFTPDCRRLITVSGDGCIFVWHLSAVIIKSMQDRLREIGRARAGAA 874          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A2R6WBU6_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WBU6_MARPO)

HSP 1 Score: 148 bits (373), Expect = 3.840e-36
Identity = 90/288 (31.25%), Postives = 142/288 (49.31%), Query Frame = 1
Query:   10 RDGLVRVFDASSAASLDGPESPGFRL------GGREGEVERTNTVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKV----RGPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDR 843
            R G +RV+D  +   +   E+    +         E ++   N   + P   + G R +R +    V R + +++TL  H+ S+TAV+F  +G +L+S   D  +V   V     G    R+     P+GTIY LDVD +  +VVTVGQDK++++ N+ASGK VR +K EG                                   GE  K+  DP+G Y      DK +R+++F +G+ +A  +GH+E+ TGV F PD +RLVS+ GD  + VW+L   + + M+ R
Sbjct:  503 RSGNLRVYDLETMKLISFQEAHDAEILSLSFTAVMEDKIPAKNEDFEPPLLLASGGR-DRLIHVYDVRRDYDVIETLDDHSASITAVKFRCNGSKLLSCSADKSVVFRNVVSSPTGCKSVRYHQEVAPRGTIYDLDVDTSEKFVVTVGQDKKINVLNLASGKPVRCFKPEGD---------------------------------AGEAIKVQFDPSGAYVVCSHTDKCLRIYEFSTGELIAQAAGHAEVITGVTFMPDCQRLVSVSGDSCIFVWKLPVGMTRAMKKR 756          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A176VI37_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VI37_MARPO)

HSP 1 Score: 148 bits (373), Expect = 4.030e-36
Identity = 90/288 (31.25%), Postives = 142/288 (49.31%), Query Frame = 1
Query:   10 RDGLVRVFDASSAASLDGPESPGFRL------GGREGEVERTNTVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKV----RGPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDR 843
            R G +RV+D  +   +   E+    +         E ++   N   + P   + G R +R +    V R + +++TL  H+ S+TAV+F  +G +L+S   D  +V   V     G    R+     P+GTIY LDVD +  +VVTVGQDK++++ N+ASGK VR +K EG                                   GE  K+  DP+G Y      DK +R+++F +G+ +A  +GH+E+ TGV F PD +RLVS+ GD  + VW+L   + + M+ R
Sbjct:  503 RSGNLRVYDLETMKLISFQEAHDAEILSLSFTAVMEDKIPAKNEDFEPPLLLASGGR-DRLIHVYDVRRDYDVIETLDDHSASITAVKFRCNGSKLLSCSADKSVVFRNVVSSPTGCKSVRYHQEVAPRGTIYDLDVDTSEKFVVTVGQDKKINVLNLASGKPVRCFKPEGD---------------------------------AGEAIKVQFDPSGAYVVCSHTDKCLRIYEFSTGELIAQAAGHAEVITGVTFMPDCQRLVSVSGDSCIFVWKLPVGMTRAMKKR 756          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A2Z6QZV5_9GLOM (Mitogen-activated protein kinase-binding protein 1 isoform X1 n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QZV5_9GLOM)

HSP 1 Score: 147 bits (371), Expect = 7.360e-36
Identity = 90/259 (34.75%), Postives = 138/259 (53.28%), Query Frame = 1
Query:  106 VERTN-TVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRG----PDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAAG 867
            +E TN  + D P   +  +R +R +    +   F L++TL  H+ S+TA++F+ DG RLIS G D  ++    +     P    +  +S  + T++ +D+D +N Y+ TV  ++RL+++ I +GK+VR+YK +   TP  + AQ                         G L KI LDP G++A     DK IRLFDF +G  L  V GHSEL TGV+FTPD  R++S   DG + VW++S +L   MR +  +   AG
Sbjct:  603 IEFTNGCLPDSPYLIATASR-DRILHVFDINNNFRLIQTLDDHSSSITAIKFTNDGGRLISCGADKSIIFRSRQNNGGFPYYVTYHNIS-GRSTVFDMDIDISNKYIATVSGERRLNVYQIDTGKNVRSYKSD---TPEEVNAQDQ-----------------------GSLIKISLDPGGVHAVTGGSDKSIRLFDFSNGNILNKVLGHSELITGVKFTPDCERVISTSADGCIFVWKVSDELVTKMRQKFLDRSGAG 833          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A2I1FVK5_9GLOM (WD40 repeat-like protein (Fragment) n=5 Tax=Rhizophagus TaxID=1129544 RepID=A0A2I1FVK5_9GLOM)

HSP 1 Score: 145 bits (367), Expect = 9.390e-36
Identity = 88/248 (35.48%), Postives = 135/248 (54.44%), Query Frame = 1
Query:  106 VERTN-TVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRG----PDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTM 834
            +E TN ++ D P   +  +R +R +    +   F L++TL  H+ S+TA++F+ DG RLIS G D  ++    +     P    +  +S  + T++ +D+D TN Y+ TV  ++RL++++I +GK+VR+YK +   TP  + AQ                         G L KI LDP G++A     DK IRLFDF +G  L  V GHSEL TGV+FTPD  R++S   DG + VW++S +L   M
Sbjct:  420 IEFTNGSLPDSPYLIATASR-DRILHVFDIKNNFRLIQTLDDHSSSITAIKFTNDGGRLISCGADKSIIFRSRQNNGGFPCYVTYHNIS-GRSTVFDMDIDITNKYISTVSGERRLNVFHIDTGKNVRSYKSD---TPEEVNAQE------------------------GSLIKISLDPGGVHAVTGGSDKSIRLFDFSNGNILGKVLGHSELITGVKFTPDCERVISTSADGCIFVWKVSDELVTKM 638          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A2K1K2J6_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K2J6_PHYPA)

HSP 1 Score: 144 bits (363), Expect = 8.450e-35
Identity = 84/250 (33.60%), Postives = 131/250 (52.40%), Query Frame = 1
Query:  127 QDGPCTRSVGTRS-------ERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVR----GPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDR 843
            ++ PC  ++ + S       +R +    V R + +V+TL  HT S+T VRF+ +G +L+S   D  +V   V     G    R+      +GTIY +D+D ++  VVTVGQ+K+L+I ++A+GK VR +K EG                                   GE  K+ +DP+G+Y      D+ +R+++F +G+ LA  SGH+E+ TGV F PD RRL+S+ GD  + VWRL  +L + MR R
Sbjct:  538 ENNPCDTALTSNSLLASGGRDRLIHVYDVNRYYDVVETLDDHTSSITTVRFACNGSKLLSCSADKSVVFRDVAMTKSGCKASRYHQEIATRGTIYDMDIDASDKLVVTVGQEKKLNILSLATGKPVRCFKPEGDV---------------------------------GEPIKVRMDPSGVYVVCSHSDRCMRIYNFITGEPLAEASGHAEVITGVTFLPDCRRLISVSGDSCIFVWRLPINLSRVMRKR 754          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A397T318_9GLOM (WD40-repeat-containing domain protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397T318_9GLOM)

HSP 1 Score: 144 bits (362), Expect = 1.150e-34
Identity = 84/245 (34.29%), Postives = 132/245 (53.88%), Query Frame = 1
Query:  121 TVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRG----PDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDR 843
            ++ D P   +  +R +R +    +   F L++TL  H+ S+TA++F+ DG RLIS G D  ++    +     P    +  +S  + T++ +D+D +N Y+ TV  ++RL++++I +GK+VR+YK +   TP  +  Q                         G L KI LDP G++A     DK IRLFDF +G  L  V GHSEL TGV+FTPD  R++S   DG + VW++S +L   MR +
Sbjct:  610 SIPDSPYLIATASR-DRILHVFDINNNFRLIQTLDDHSSSITAIKFTNDGGRLISCGADKSIIFRSRQNSGDFPYYVTYHNIS-GRATVFDMDIDISNRYIATVSGERRLNVFHIDTGKNVRSYKSD---TPDEVNIQDQ-----------------------GSLIKISLDPGGVHAVTGGSDKSIRLFDFSNGNILGKVLGHSELITGVKFTPDCERIISTSADGCIFVWKVSSELVTKMRQK 826          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A482WV20_LAOST (Uncharacterized protein n=2 Tax=Delphacidae TaxID=33362 RepID=A0A482WV20_LAOST)

HSP 1 Score: 143 bits (360), Expect = 2.090e-34
Identity = 89/291 (30.58%), Postives = 149/291 (51.20%), Query Frame = 1
Query:   10 RDGLVRVFDASSAASLDGPESPGFRLGGREGEVERT--NTVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRF--SKDGKRLISAGGDNVLVLNKVRGPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAAGG 870
            R G +R+ D +S   L   E+    +   E    R+  +T  +  C        +R +    V + +  ++TL  H+ S+TAVRF  +++  +++S G D  ++  +++G    R    +  + T+Y ++VD    +++T  QD+ + +++I SGKH + +K                               G+ GE G  L K+ LDP+G+  A+   DK + ++D+YSG+CLAT+ GHSELATG+RFT D RRL+S  GDG + VW++  DL  TM  R+ +  A  G
Sbjct:  495 RAGNIRIHDLNSLQQLCLIEAHDAEVLCLEYSQSRSIHDTSDNSSCNFLASASRDRLIHVFDVDQDYNFIQTLDDHSSSITAVRFLNTQNQLQMVSCGADKSIIFRQLQGGQFSRGHNAA-GKTTLYDMEVDCMQKHILTACQDRNIRVYSINSGKHTKTFK-------------------------------GSVGEDG-SLIKVSLDPSGILVASSCTDKTLCIYDYYSGECLATMLGHSELATGLRFTNDCRRLISASGDGCIFVWKVPHDLVVTMHARLSQQAARAG 752          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2N1NP55_9GLOM1.720e-3634.75WD40 repeat-like protein n=1 Tax=Rhizophagus irreg... [more]
A0A015J4D6_RHIIW2.160e-3634.75Dip2p n=8 Tax=Rhizophagus irregularis TaxID=588596... [more]
A0A482UGK1_9ARCH2.620e-3633.47Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A2R6WBU6_MARPO3.840e-3631.25Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
A0A176VI37_MARPO4.030e-3631.25Uncharacterized protein n=3 Tax=Marchantia polymor... [more]
A0A2Z6QZV5_9GLOM7.360e-3634.75Mitogen-activated protein kinase-binding protein 1... [more]
A0A2I1FVK5_9GLOM9.390e-3635.48WD40 repeat-like protein (Fragment) n=5 Tax=Rhizop... [more]
A0A2K1K2J6_PHYPA8.450e-3533.60Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A397T318_9GLOM1.150e-3434.29WD40-repeat-containing domain protein n=1 Tax=Glom... [more]
A0A482WV20_LAOST2.090e-3430.58Uncharacterized protein n=2 Tax=Delphacidae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig101contigF-serratus_M_contig101:217333..220246 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score323.9
Seed ortholog evalue7.9e-86
Seed eggNOG ortholog2880.D7FN20
Preferred nameWDR90
KEGG koko:K14962,ko:K21763
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Mitogen-activated protein
EggNOG OGsKOG1408@1,KOG1408@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03036
Exons7
Model size930
Cds size927
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928807.7414663-CDS-F-serratus_M_contig101:217334..2173551622928807.7414663-CDS-F-serratus_M_contig101:217334..217355Fucus serratus maleCDSF-serratus_M_contig101 217335..217355 -
1690962581.4750507-CDS-F-serratus_M_contig101:217334..2173551690962581.4750507-CDS-F-serratus_M_contig101:217334..217355Fucus serratus maleCDSF-serratus_M_contig101 217335..217355 -
1622928807.7525513-CDS-F-serratus_M_contig101:217557..2176821622928807.7525513-CDS-F-serratus_M_contig101:217557..217682Fucus serratus maleCDSF-serratus_M_contig101 217558..217682 -
1690962581.4879322-CDS-F-serratus_M_contig101:217557..2176821690962581.4879322-CDS-F-serratus_M_contig101:217557..217682Fucus serratus maleCDSF-serratus_M_contig101 217558..217682 -
1622928807.7669528-CDS-F-serratus_M_contig101:217901..2180191622928807.7669528-CDS-F-serratus_M_contig101:217901..218019Fucus serratus maleCDSF-serratus_M_contig101 217902..218019 -
1690962581.4992864-CDS-F-serratus_M_contig101:217901..2180191690962581.4992864-CDS-F-serratus_M_contig101:217901..218019Fucus serratus maleCDSF-serratus_M_contig101 217902..218019 -
1622928807.7771888-CDS-F-serratus_M_contig101:218443..2186801622928807.7771888-CDS-F-serratus_M_contig101:218443..218680Fucus serratus maleCDSF-serratus_M_contig101 218444..218680 -
1690962581.5073116-CDS-F-serratus_M_contig101:218443..2186801690962581.5073116-CDS-F-serratus_M_contig101:218443..218680Fucus serratus maleCDSF-serratus_M_contig101 218444..218680 -
1622928807.7920377-CDS-F-serratus_M_contig101:219201..2192861622928807.7920377-CDS-F-serratus_M_contig101:219201..219286Fucus serratus maleCDSF-serratus_M_contig101 219202..219286 -
1690962581.5172231-CDS-F-serratus_M_contig101:219201..2192861690962581.5172231-CDS-F-serratus_M_contig101:219201..219286Fucus serratus maleCDSF-serratus_M_contig101 219202..219286 -
1622928807.807029-CDS-F-serratus_M_contig101:219577..2196431622928807.807029-CDS-F-serratus_M_contig101:219577..219643Fucus serratus maleCDSF-serratus_M_contig101 219578..219643 -
1690962581.5248504-CDS-F-serratus_M_contig101:219577..2196431690962581.5248504-CDS-F-serratus_M_contig101:219577..219643Fucus serratus maleCDSF-serratus_M_contig101 219578..219643 -
1622928807.8178904-CDS-F-serratus_M_contig101:219971..2202461622928807.8178904-CDS-F-serratus_M_contig101:219971..220246Fucus serratus maleCDSF-serratus_M_contig101 219972..220246 -
1690962581.5321817-CDS-F-serratus_M_contig101:219971..2202461690962581.5321817-CDS-F-serratus_M_contig101:219971..220246Fucus serratus maleCDSF-serratus_M_contig101 219972..220246 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig101.198.1prot_F-serratus_M_contig101.198.1Fucus serratus malepolypeptideF-serratus_M_contig101 217335..220246 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig101.198.1

>prot_F-serratus_M_contig101.198.1 ID=prot_F-serratus_M_contig101.198.1|Name=mRNA_F-serratus_M_contig101.198.1|organism=Fucus serratus male|type=polypeptide|length=309bp
SSGRDGLVRVFDASSAASLDGPESPGFRLGGREGEVERTNTVQDGPCTRS
VGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDN
VLVLNKVRGPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWN
IASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGG
ELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFT
PDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAAGGGQARACTDAA
GTTIASGPT
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mRNA from alignment at F-serratus_M_contig101:217333..220246-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig101.198.1 ID=mRNA_F-serratus_M_contig101.198.1|Name=mRNA_F-serratus_M_contig101.198.1|organism=Fucus serratus male|type=mRNA|length=2914bp|location=Sequence derived from alignment at F-serratus_M_contig101:217333..220246- (Fucus serratus male)
TCGTCGGGTCGAGACGGTCTTGTGCGCGTGTTTGATGCGTCTTCGGCTGC TTCGTTGGATGGTCCGGAGAGTCCTGGCTTCCGTCTCGGTGGAAGAGAGG GTGAGGTAGAGCGGACGAATACGGTCCAGGACGGGCCGTGCACGCGGTCC GTAGGAACGAGGTCAGAGAGGTCGGTGGCGGCGGCAGGCGTCGCGAGACC TTTCCCGCTCGTGAAGACGTTGGGTTGTCACACGGGCTCCGTAACGGCGG TCAGGTTCTCGAAGGATGGGAAAAGGTAGGCAAATAAAAATTACACGGCG ACTTGTTTCGTGTATACATGGGCCGTGCTTCAATCAAAGCAGTACATGGC TCCGAGACCCCCTGCGTGGCAACGTCGACCAAAAGCGCCGCTCCGCGCTA ACAGAGAGCCTATTTGTTGCTCCTTCCCGTGTGGCTTTTTATCCTGGCTT TTGCCAAAAACCCGGGACGAGCAGTTTGCACTCAAGCAAGCGCTCTTGCG CCTTCTTTCTGCTCGGTATCTTAATGCTCTACCGTACGCTCGACGGCGTT GTGTCTTCTCTGCTGTCCCTTGTTCTGTCTTGATTCATGTTCGGGGGATG AAGGCTGATCTCGGCGGGAGGAGACAATGTGTTGGTTCTGAACAAAGTCC GAGGGCCTGATATCCAGAGGTGAGGGGCATAGGGAAAAGTTCAAAATAGA CCAACGACTTTGTCCCCGCTTTTTATAAATCACCGCTGCGATTCTGGCGT GAAGCATTCTTGTTCGTTTTGGAACGGTTGACCAAGTTGAACATTCCCTC CGGAGCAAGAGCGAACTTCGTCATTGGCGGTGCTCGCCGACTGCCCGGAA CTTTGACGGAGAATTTTGAACGAGTTGATAGCCACCAGGAAAAACGCCGC TGGCACCAGAAACAAATATTTTTGCATGCCGTACCGTTTCGTCTTCGTCC CGCTTGGCAGGTTCAAGGCCGTAAGCGTTCCTCAGGGCACGATCTACGGT CTAGATGTGGATCCCACCAATAACTACGTCGTGACTGTTGGTCAGGTTAG ATGTCAGGAACTGATAAGTCAGTGAACTTTGTTCTCCAATGTATTTCCCC GCTCGAAGTGACTCTCAACGTCCAGATCATCCCCCCCCCCGAGCCCTCAC CAGGAAGAAGCCGTCTTACCCCGTGTCTCCGCTTCAGGTCGGAGGTTGTC ATTTTTGCCTCATAATTTTTGTGTACTTTTGTGCACGCGAGTAACGCCCA CGAGAAGACTCATGAGTGCCACCCGCGCCATGCTTCATCGTGCTAAATGG GAAAGGTTAAGAGAAGGGTTTCAAAGAGACGTTTGACTGCCGATCACGAG AATGCAAGAATCATTTCGTTAGAACACGCTGCTTGGCAGGCGTAGCGGGA CCCGCTCGGTGGCGAGTGGCCCACCGCAACAAGCCGATATAACGTTCGTA ACCAGTAATATGATGTCGTGAAAAAGGTGTTCGCTAGGGGGTTGGGTAGC GCATCGCGGTGATGCAATTGACTCCCGTCTCGTCCCGTCCAATTTCCTAC CCCGTCAATGACATAGGACAAGCGTCTTCACATCTGGAACATCGCTTCGG GCAAGCACGTCAGGGCGTACAAGGTCGAAGGCCCGCCAACGCCACTGTCG TTGGGTGCTCAGTCAGCGGCGACGGCGCCCGTGAGGAGCAAGAGCGGTGC CGTACGGCCTGGAGGGGGAAACAAGGGAGAAAGAGGAGGGGAGCTATTCA AGATCGACCTGGATCCGACGGGCATGTACGCCGCCGCGTGCAGCTTCGAT AAGGTTTGAGCGGGATGATGAAATAGTTGTTGCGGTGTGTTGGCTGTTGA CCCTGCCTAGCTTCGTTCTGGACGAAGCGCTCACTCCTCCATGAGGACTT ACAAAGGACGAGTGCCTGCTTCTTGAGGGTTTCGCGGCACTTTTAGGTTC TTCATCCCCGCCGCGTCGTGCTTGATTTCCCTTGCACAGGCAGGAGAGGT ACATGTTCAAAACGTGTACGGTAGCGCTTCTCTCCCGCCCCCTTCTTTGG GCCTGACGCGCCGAACATACCCCCCGTGTTCATGCCGGTTTCTTCTTTTG TGCTGTTCCAACTCCGCGAAACATCCGCGCGGCCGGAATCGGTACGGATG CTTCTCCTGGTCGACGAAACTGAACCACCCTTACACCAACGGAATCTTTC ACGGCCGAACCTTTTCATAAAAAAAAGTGGATCCGATTGTTCGACTTCTA CTCCGGGAAGTGCTTGGCCACCGTTTCGGGTCACAGCGAGCTCGCAACCG GCGTTCGATTCACTCCGGACGGCCGGCGTCTAGTCTCAATCGGCGGTGAG AGGGACCCTGCTCGCTTCGTATATCCTAAATTTGCCCATAATATTGTTTG ACTGGGCTTCATTCGGTCGGGACGCGTGTTGGCGATCTCTCTTGTCGAAC CGTCGATATTTTCATTTCCCCGTCGCCCGTCGCCCCCCCCTCCCCCCCCC GCCAGCGTCCCCCCGCGAAAAATTCCTATTCCTTCACGATTTCCCCCGAC CCCGGCCTCGACAGGTGACGGAGTGATGCTAGTGTGGCGGTTGTCTCCAG ATCTCCAGCAGACTATGCGCGACCGCATGGACGAGCTGAAGGCCGCCGGT GGCGGCCAAGCGAGAGCTTGCACTGACGCAGCCGGCACGGTGAGACTGGA TCCTTCTTTGCGCTCCTCGTAATCTCGTGGTTTGCGGTTTCGTTTGAGCA ACGTCCGAGATGAGTTAATCGCGGCCACAGCGTATAGAAAAAGGTTCCAG GTGGCGTCACTCGGATGGATGGATGAATGCAATACCCCCCGGTTGTCTCG TTAGTGTTCAGTGCTGCCTCGACTTCCGGCATGCCCCACAGACGATAGCC TCGGGACCGACGCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig101:217333..220246-

>mRNA_F-serratus_M_contig101.198.1 ID=mRNA_F-serratus_M_contig101.198.1|Name=mRNA_F-serratus_M_contig101.198.1|organism=Fucus serratus male|type=CDS|length=1854bp|location=Sequence derived from alignment at F-serratus_M_contig101:217333..220246- (Fucus serratus male)
TCGTCGGGTCGAGACGGTCTTGTGCGCGTGTTTGATGCGTCTTCGGCTGC
TTCGTTGGATGGTCCGGAGAGTCCTGGCTTCCGTCTCGGTGGAAGAGAGG
GTGAGGTAGAGCGGACGAATACGGTCCAGGACGGGCCGTGCACGCGGTCC
GTAGGAACGAGGTCAGAGAGGTCGGTGGCGGCGGCAGGCGTCGCGAGACC
TTTCCCGCTCGTGAAGACGTTGGGTTGTCACACGGGCTCCGTAACGGCGG
TCAGGTTCTCGAAGGATGGGAAAAGTCGTCGGGTCGAGACGGTCTTGTGC
GCGTGTTTGATGCGTCTTCGGCTGCTTCGTTGGATGGTCCGGAGAGTCCT
GGCTTCCGTCTCGGTGGAAGAGAGGGTGAGGTAGAGCGGACGAATACGGT
CCAGGACGGGCCGTGCACGCGGTCCGTAGGAACGAGGTCAGAGAGGTCGG
TGGCGGCGGCAGGCGTCGCGAGACCTTTCCCGCTCGTGAAGACGTTGGGT
TGTCACACGGGCTCCGTAACGGCGGTCAGGTTCTCGAAGGATGGGAAAAG
GCTGATCTCGGCGGGAGGAGACAATGTGTTGGTTCTGAACAAAGTCCGAG
GGCCTGATATCCAGAGGCTGATCTCGGCGGGAGGAGACAATGTGTTGGTT
CTGAACAAAGTCCGAGGGCCTGATATCCAGAGGTTCAAGGCCGTAAGCGT
TCCTCAGGGCACGATCTACGGTCTAGATGTGGATCCCACCAATAACTACG
TCGTGACTGTTGGTCAGGTTCAAGGCCGTAAGCGTTCCTCAGGGCACGAT
CTACGGTCTAGATGTGGATCCCACCAATAACTACGTCGTGACTGTTGGTC
AGGACAAGCGTCTTCACATCTGGAACATCGCTTCGGGCAAGCACGTCAGG
GCGTACAAGGTCGAAGGCCCGCCAACGCCACTGTCGTTGGGTGCTCAGTC
AGCGGCGACGGCGCCCGTGAGGAGCAAGAGCGGTGCCGTACGGCCTGGAG
GGGGAAACAAGGGAGAAAGAGGAGGGGAGCTATTCAAGATCGACCTGGAT
CCGACGGGCATGTACGCCGCCGCGTGCAGCTTCGATAAGGACAAGCGTCT
TCACATCTGGAACATCGCTTCGGGCAAGCACGTCAGGGCGTACAAGGTCG
AAGGCCCGCCAACGCCACTGTCGTTGGGTGCTCAGTCAGCGGCGACGGCG
CCCGTGAGGAGCAAGAGCGGTGCCGTACGGCCTGGAGGGGGAAACAAGGG
AGAAAGAGGAGGGGAGCTATTCAAGATCGACCTGGATCCGACGGGCATGT
ACGCCGCCGCGTGCAGCTTCGATAAGTGGATCCGATTGTTCGACTTCTAC
TCCGGGAAGTGCTTGGCCACCGTTTCGGGTCACAGCGAGCTCGCAACCGG
CGTTCGATTCACTCCGGACGGCCGGCGTCTAGTCTCAATCGGCGTGGATC
CGATTGTTCGACTTCTACTCCGGGAAGTGCTTGGCCACCGTTTCGGGTCA
CAGCGAGCTCGCAACCGGCGTTCGATTCACTCCGGACGGCCGGCGTCTAG
TCTCAATCGGCGGTGACGGAGTGATGCTAGTGTGGCGGTTGTCTCCAGAT
CTCCAGCAGACTATGCGCGACCGCATGGACGAGCTGAAGGCCGCCGGTGG
CGGCCAAGCGAGAGCTTGCACTGACGCAGCCGGCACGGTGACGGAGTGAT
GCTAGTGTGGCGGTTGTCTCCAGATCTCCAGCAGACTATGCGCGACCGCA
TGGACGAGCTGAAGGCCGCCGGTGGCGGCCAAGCGAGAGCTTGCACTGAC
GCAGCCGGCACGACGATAGCCTCGGGACCGACGACGATAGCCTCGGGACC
GACG
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