mRNA_F-serratus_M_contig101.198.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig101.198.1
Unique NamemRNA_F-serratus_M_contig101.198.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: D7FN20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN20_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 3.890e-96
Identity = 185/349 (53.01%), Postives = 220/349 (63.04%), Query Frame = 1
Query:    1 SSGRDGLVRVFDASSAASLDGPESPGFRLGGR-------------------------------------EGEVERTNTVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRGPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELK----AAGGGQARACTDAA--GTTIAS 918
            S+ RD LVRVFDAS +  +    S G  +GGR                                      G+        +   T + G  +E  V AA  A   PL+ TL  HTGSV+AV+FSKDGKRLI+AGGD  LVLN VRGP + R +AV VPQGTIYGLDVDPTN Y++T GQDKRL+IW+  SGKHVRAY+VE P T     + SA +        +V  G  +KG+ GGELFK+DLDPTGMYAAACSFDKWIRLFDFYSG+CLA V+GHSELATGVRFTPDGRRLV+ GGDGVM VWRLS +L ++MRDRM EL+     AGGG  R   D    G+T++S
Sbjct:  823 SASRDRLVRVFDASRSPFV---YSAGAGVGGRGXXXXXXXSEAATTAARGSAAACAENVVAHRSSRGKEAGQPGARENAANTDATAAPGGAAETGVGAASEAAGLPLLTTLDSHTGSVSAVKFSKDGKRLITAGGDKTLVLNSVRGPHVHRLRAVKVPQGTIYGLDVDPTNKYIITAGQDKRLNIWSTISGKHVRAYQVE-PLTKTPNPSPSAESTAGGQGGASVGEGPRDKGDTGGELFKVDLDPTGMYAAACSFDKWIRLFDFYSGECLAKVAGHSELATGVRFTPDGRRLVTTGGDGVMFVWRLSSELHESMRDRMCELRPGGETAGGGSIRGTRDGGRGGSTLSS 1167          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A6H5L4C9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C9_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 2.170e-79
Identity = 162/308 (52.60%), Postives = 188/308 (61.04%), Query Frame = 1
Query:    1 SSGRDGLVRVFDASSAASLDGPESPGFRLGG--------------------------------REGEVERTNTVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRGPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPL------SLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDK--------WIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGD 786
            S+ RD LVRVFDAS + S+      G   GG                                + G++       +   T + G  +E  V AA  A   PL+ TL  HTG V AV+FSKDGKRLI+AGGD +LVLN VRGP + R +AV V QGTIYGLDVDPTN Y+VT GQDKRL+IW+  SGKHVRAYKVE    PL      SL A+S A    R+  G    G  +KG+ GGELFK+DLDPTGMYAAACSFDK        WIRLFDFYSG+CLA V+GHSELATGVRFTPDGRRLV+ G D
Sbjct:  210 SASRDRLVRVFDASRSPSVCSAGVGGRGAGGXXXASEAATPAARGSAAACADNGVAHRSSRGKKAGQLGARENATNTDATAAPGVAAETGVGAASEAAGLPLLLTLDSHTGPVGAVKFSKDGKRLITAGGDKMLVLNSVRGPHVHRLRAVKVTQGTIYGLDVDPTNKYIVTAGQDKRLNIWSTISGKHVRAYKVE----PLMKTRNPSLLAESTAGGQGRTSVGG---GPRDKGDTGGELFKVDLDPTGMYAAACSFDKVCVRCSIVWIRLFDFYSGECLAKVAGHSELATGVRFTPDGRRLVTTGDD 510          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A7S2AWM8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AWM8_9STRA)

HSP 1 Score: 171 bits (433), Expect = 7.470e-49
Identity = 95/235 (40.43%), Postives = 129/235 (54.89%), Query Frame = 1
Query:  235 GSVTAVRFSKDGKRLISAGGDNVLVLNKV--------------------------RGP---DIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDE 852
            GSVTA R SK+G +L + GGD  L L +V                          R P   D  +  A   PQ  +Y +  D T  YVVTVG D+ LHI++ A+GKHVR Y  + P      G +                GGG      GEL+K+ + P GMYAA CSFD+W+RLFD +SG+CLA V GH+EL TG+RF+ DG+RL+S+GGDG + VW+L+  + Q + +R++E
Sbjct:    1 GSVTAARMSKNGSKLFTCGGDLHLNLCRVASNAEVTAMCDMTSDEGQREVVTRYLRAPLIRDSSQTSAAGDPQQMVYDMTSDGTGKYVVTVGSDRHLHIFSAANGKHVRKYAADAPNNTQDKGGE----------------GGG------GELYKVAVCPAGMYAATCSFDRWVRLFDLFSGRCLAQVGGHAELITGIRFSSDGQRLLSVGGDGCIFVWKLASQITQAIGERLEE 213          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A7S2S3R8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3R8_9STRA)

HSP 1 Score: 184 bits (468), Expect = 8.430e-49
Identity = 96/235 (40.85%), Postives = 140/235 (59.57%), Query Frame = 1
Query:  202 FPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRGPD--------------IQRFKAVSVPQGTIYGLDVDPTNNYVVTVG-QDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKA 861
            + L+++   HT +V++VRFS DGKRL S G D +L L++V  P               +  ++++ + QG  Y ++ D T  Y++T G +DK LHI++  SGKHVR Y  +  P                    A   G G  G    EL+K+ + P GMY A CSFDKWIRLFDFYSG C+A V+GH+EL TG++FTPDG+RL+SIGGDG + VW+L+  + + +++R  E++A
Sbjct:  163 YRLLESQEYHTAAVSSVRFSLDGKRLFSCGTDKILTLSRVLAPGPENTTPSEGSPMNLVHLYRSIPLNQGMAYDMNTDRTGKYIITTGGEDKLLHIYSATSGKHVRCYSADLEP--------------------AADAGKGASGSS--ELYKLAICPGGMYTATCSFDKWIRLFDFYSGACIAQVAGHAELVTGLKFTPDGKRLISIGGDGCIFVWKLNSAIARGIQEREKEIEA 375          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A7S1CEL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEL4_9STRA)

HSP 1 Score: 181 bits (459), Expect = 6.570e-48
Identity = 110/292 (37.67%), Postives = 153/292 (52.40%), Query Frame = 1
Query:   10 RDGLVRVFDASSAASLDGPESPGFRLGGREGEVERTNTVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVR-------GPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAA 864
            R+G VRV+D  +             L   + EV             + G+R +R V      R + L  +L  HT +VTAV FS D  RL+S  GD  LV N+V        G  + R KA + P GTIY + VD TN  +VT GQDKRL+IWN+AS K VR+Y                          A  PG         EL ++ +DP G+ A  CSFDK IR++DFY G+ L+ V+ HSE+ TG+ FT D RR++S+GGD  ++VWRL+P+L   MR+R+ E++++
Sbjct:  540 REGNVRVYDLRTMGLT-------HMLPAHDAEVMSVCFAPRSGALVASGSR-DRMVHVFDARRSYALGASLDAHTSAVTAVLFSNDDSRLLSCAGDKTLVFNRVNLDGDAAAGELVTRIKAATAPNGTIYDMHVDSTNRSLVTAGQDKRLNIWNMASCKPVRSY--------------------------AADPGCQ-------ELNRVVMDPAGILAVTCSFDKAIRMYDFYEGRRLSRVTAHSEMVTGLAFTHDCRRMISVGGDACIMVWRLAPELTSAMRERLSEIQSS 790          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A2R5GFS1_9STRA (WD repeat-containing protein 62 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFS1_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.620e-46
Identity = 99/217 (45.62%), Postives = 131/217 (60.37%), Query Frame = 1
Query:  211 VKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRGPD--IQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDEL 855
            V+TL  H+  VTAVRFS DG+RL+S GGD  +VL+ V G D    R K+V+VP GTI+ +DVD +N Y  T GQDK+++IW++++GK +R+YK EG P                                 GEL K+ LDP GMY A  S DK IRL DFYSG CLA  +GH E  TG+ FT D +RLVS+  DG + VWRL+P++   +++R  EL
Sbjct:  553 VQTLKDHSAIVTAVRFSVDGERLLSTGGDKTIVLS-VLGLDGRYARQKSVNVPYGTIHDVDVDASNKYFCTSGQDKKINIWSLSNGKSIRSYKPEGDP---------------------------------GELTKVLLDPAGMYCATGSHDKAIRLLDFYSGDCLAKSAGHGEPITGLAFTSDCKRLVSVSRDGCVFVWRLAPEIHAAIKERKREL 735          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A7S2CJK0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CJK0_9STRA)

HSP 1 Score: 160 bits (405), Expect = 2.700e-45
Identity = 84/168 (50.00%), Postives = 105/168 (62.50%), Query Frame = 1
Query:  352 VSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDEL 855
            V + QG +Y +  D T  YVVTVG D++LHI   ASGKHVR Y  + PP+ +  G     T    SKS               EL+K+ L P GMY A CSFDKWIRLFDFYSG+CLA V+GH+EL TG+RF+ DG RL+S+GGDG + VW+L   L   M +R+ EL
Sbjct:    1 VPLNQGMVYDMASDVTGKYVVTVGADRQLHIHAAASGKHVRCYTGDPPPSLVGGGGPGGETV---SKS---------------ELYKMALCPAGMYTATCSFDKWIRLFDFYSGRCLAQVAGHAELVTGLRFSADGTRLLSVGGDGCIFVWKLGGGLVSAMAERLQEL 150          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A7S1UAY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAY3_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.030e-41
Identity = 91/259 (35.14%), Postives = 145/259 (55.98%), Query Frame = 1
Query:  100 GEVERTNTVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRGPDI-----QRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKA 861
            G  +R   + +   T + G + +      GV R   LV +   H+G+VT+V+FS+D +RL+S G D+ L   ++   +       ++K+ S  +G+++G+  D +  Y VTVGQDK + I+N+ +G+ VR YK +         AQ AA               G    RG E  ++ +DP+G+Y A CS+D+W+R+ DFYSG+ +A  +GH E+ T   FTPDG+ LV+ G DGV+  W+L P ++  + DR+ ELKA
Sbjct:  407 GSRDRLVHIFEDAATAAGGEKPQPEEDGGGVPR---LVCSTAYHSGAVTSVQFSRDARRLLSVGTDSALTCMELCYAEEGAVKPSKYKSASHAKGSLHGVATDASGKYCVTVGQDKVMRIYNVKNGRFVRNYKPQ---------AQGAA---------------GGSAPRG-ETLRVSVDPSGLYVATCSYDRWVRITDFYSGRVVARAAGHGEVVTAAAFTPDGQNLVTAGADGVIFSWKLPPHVRTAVSDRLQELKA 637          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A2P6NS99_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NS99_9EUKA)

HSP 1 Score: 155 bits (392), Expect = 1.150e-38
Identity = 98/292 (33.56%), Postives = 149/292 (51.03%), Query Frame = 1
Query:   10 RDGLVRVFDASSAASLDGPESPGFRLGGREGEVERTNTVQ-----DGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRGPDIQRFKAVS---VPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDG--RRLVSIGGDGVMLVWRLSPDLQQTMRDRMDEL 855
            R G VRV D  S + +   E+        + EV      Q      GP   + G+R +  +    +   F LV +L  H+ S+T+++F+  G +L+S G D  ++  +V+   I  FK      V  GT++ +D+DPTN +VVT GQ+K+L+++ IA+GK  R+YK EG                                   GE  K+ LDP G+YAA  S DK IRL+DF+SG  +  V GHSE+ TG+ F+ D    RL+S+ GD  + +W+LSP+L   M +R+ E+
Sbjct:  506 RSGNVRVHDMHSLSEISYSEA-------HDEEVLSLAFSQPKEDGSGPLLLASGSR-DHLIHVFDINNRFQLVHSLADHSSSITSIQFANQGTKLLSCGADRSILFREVQTNPIG-FKLAHTSMVHYGTVFDMDIDPTNRFVVTAGQEKKLNVYTIATGKSSRSYKTEG---------------------------------ECGETLKVKLDPAGLYAATSSADKNIRLYDFFSGDFMTKVCGHSEVVTGLAFSRDKDCSRLLSVSGDSCIFIWKLSPELSANMEERLSEI 755          
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A7S3CYC9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3CYC9_9EUKA)

HSP 1 Score: 144 bits (364), Expect = 1.460e-37
Identity = 80/213 (37.56%), Postives = 109/213 (51.17%), Query Frame = 1
Query:  235 GSVTAVRFSKDGKRLISAGGDNVLVLNKVRGP--DIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAAG 867
            G    V  + D  +L+S   D  +V   ++ P  ++ R+       GTIY + +D TN Y VT GQDK++ IW + +GK  R YK++                                    GE  KI +DP G+  A    DK++RL DF SG+CL  V GHSEL TG++FTPD RRL+S+ GDG M VW+L  DL + M DR+ EL  AG
Sbjct:   11 GGPFVVGSNMDDVKLLSCSADKSIVFRSIQEPSGEVGRYSQCVSQYGTIYDMSLDVTNKYAVTGGQDKKIKIWKVENGKSNRIYKLDADT---------------------------------GEPIKIQMDPAGVTFATSGSDKFVRLHDFLSGECLVRVGGHSELITGLKFTPDCRRLISVAGDGCMFVWKLRSDLTRAMLDRLAELFPAG 190          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN20_ECTSI3.890e-9653.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4C9_9PHAE2.170e-7952.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2AWM8_9STRA7.470e-4940.43Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2S3R8_9STRA8.430e-4940.85Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1CEL4_9STRA6.570e-4837.67Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A2R5GFS1_9STRA1.620e-4645.62WD repeat-containing protein 62 n=1 Tax=Hondaea fe... [more]
A0A7S2CJK0_9STRA2.700e-4550.00Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S1UAY3_9STRA1.030e-4135.14Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A2P6NS99_9EUKA1.150e-3833.56Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A7S3CYC9_9EUKA1.460e-3737.56Hypothetical protein (Fragment) n=1 Tax=Palpitomon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig101contigF-serratus_M_contig101:217333..220246 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score323.9
Seed ortholog evalue7.9e-86
Seed eggNOG ortholog2880.D7FN20
Preferred nameWDR90
KEGG koko:K14962,ko:K21763
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Mitogen-activated protein
EggNOG OGsKOG1408@1,KOG1408@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03036
Exons7
Model size930
Cds size927
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928807.7414663-CDS-F-serratus_M_contig101:217334..2173551622928807.7414663-CDS-F-serratus_M_contig101:217334..217355Fucus serratus maleCDSF-serratus_M_contig101 217335..217355 -
1690962581.4750507-CDS-F-serratus_M_contig101:217334..2173551690962581.4750507-CDS-F-serratus_M_contig101:217334..217355Fucus serratus maleCDSF-serratus_M_contig101 217335..217355 -
1622928807.7525513-CDS-F-serratus_M_contig101:217557..2176821622928807.7525513-CDS-F-serratus_M_contig101:217557..217682Fucus serratus maleCDSF-serratus_M_contig101 217558..217682 -
1690962581.4879322-CDS-F-serratus_M_contig101:217557..2176821690962581.4879322-CDS-F-serratus_M_contig101:217557..217682Fucus serratus maleCDSF-serratus_M_contig101 217558..217682 -
1622928807.7669528-CDS-F-serratus_M_contig101:217901..2180191622928807.7669528-CDS-F-serratus_M_contig101:217901..218019Fucus serratus maleCDSF-serratus_M_contig101 217902..218019 -
1690962581.4992864-CDS-F-serratus_M_contig101:217901..2180191690962581.4992864-CDS-F-serratus_M_contig101:217901..218019Fucus serratus maleCDSF-serratus_M_contig101 217902..218019 -
1622928807.7771888-CDS-F-serratus_M_contig101:218443..2186801622928807.7771888-CDS-F-serratus_M_contig101:218443..218680Fucus serratus maleCDSF-serratus_M_contig101 218444..218680 -
1690962581.5073116-CDS-F-serratus_M_contig101:218443..2186801690962581.5073116-CDS-F-serratus_M_contig101:218443..218680Fucus serratus maleCDSF-serratus_M_contig101 218444..218680 -
1622928807.7920377-CDS-F-serratus_M_contig101:219201..2192861622928807.7920377-CDS-F-serratus_M_contig101:219201..219286Fucus serratus maleCDSF-serratus_M_contig101 219202..219286 -
1690962581.5172231-CDS-F-serratus_M_contig101:219201..2192861690962581.5172231-CDS-F-serratus_M_contig101:219201..219286Fucus serratus maleCDSF-serratus_M_contig101 219202..219286 -
1622928807.807029-CDS-F-serratus_M_contig101:219577..2196431622928807.807029-CDS-F-serratus_M_contig101:219577..219643Fucus serratus maleCDSF-serratus_M_contig101 219578..219643 -
1690962581.5248504-CDS-F-serratus_M_contig101:219577..2196431690962581.5248504-CDS-F-serratus_M_contig101:219577..219643Fucus serratus maleCDSF-serratus_M_contig101 219578..219643 -
1622928807.8178904-CDS-F-serratus_M_contig101:219971..2202461622928807.8178904-CDS-F-serratus_M_contig101:219971..220246Fucus serratus maleCDSF-serratus_M_contig101 219972..220246 -
1690962581.5321817-CDS-F-serratus_M_contig101:219971..2202461690962581.5321817-CDS-F-serratus_M_contig101:219971..220246Fucus serratus maleCDSF-serratus_M_contig101 219972..220246 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig101.198.1prot_F-serratus_M_contig101.198.1Fucus serratus malepolypeptideF-serratus_M_contig101 217335..220246 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig101.198.1

>prot_F-serratus_M_contig101.198.1 ID=prot_F-serratus_M_contig101.198.1|Name=mRNA_F-serratus_M_contig101.198.1|organism=Fucus serratus male|type=polypeptide|length=309bp
SSGRDGLVRVFDASSAASLDGPESPGFRLGGREGEVERTNTVQDGPCTRS
VGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDN
VLVLNKVRGPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWN
IASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGG
ELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFT
PDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAAGGGQARACTDAA
GTTIASGPT
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mRNA from alignment at F-serratus_M_contig101:217333..220246-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig101.198.1 ID=mRNA_F-serratus_M_contig101.198.1|Name=mRNA_F-serratus_M_contig101.198.1|organism=Fucus serratus male|type=mRNA|length=2914bp|location=Sequence derived from alignment at F-serratus_M_contig101:217333..220246- (Fucus serratus male)
TCGTCGGGTCGAGACGGTCTTGTGCGCGTGTTTGATGCGTCTTCGGCTGC TTCGTTGGATGGTCCGGAGAGTCCTGGCTTCCGTCTCGGTGGAAGAGAGG GTGAGGTAGAGCGGACGAATACGGTCCAGGACGGGCCGTGCACGCGGTCC GTAGGAACGAGGTCAGAGAGGTCGGTGGCGGCGGCAGGCGTCGCGAGACC TTTCCCGCTCGTGAAGACGTTGGGTTGTCACACGGGCTCCGTAACGGCGG TCAGGTTCTCGAAGGATGGGAAAAGGTAGGCAAATAAAAATTACACGGCG ACTTGTTTCGTGTATACATGGGCCGTGCTTCAATCAAAGCAGTACATGGC TCCGAGACCCCCTGCGTGGCAACGTCGACCAAAAGCGCCGCTCCGCGCTA ACAGAGAGCCTATTTGTTGCTCCTTCCCGTGTGGCTTTTTATCCTGGCTT TTGCCAAAAACCCGGGACGAGCAGTTTGCACTCAAGCAAGCGCTCTTGCG CCTTCTTTCTGCTCGGTATCTTAATGCTCTACCGTACGCTCGACGGCGTT GTGTCTTCTCTGCTGTCCCTTGTTCTGTCTTGATTCATGTTCGGGGGATG AAGGCTGATCTCGGCGGGAGGAGACAATGTGTTGGTTCTGAACAAAGTCC GAGGGCCTGATATCCAGAGGTGAGGGGCATAGGGAAAAGTTCAAAATAGA CCAACGACTTTGTCCCCGCTTTTTATAAATCACCGCTGCGATTCTGGCGT GAAGCATTCTTGTTCGTTTTGGAACGGTTGACCAAGTTGAACATTCCCTC CGGAGCAAGAGCGAACTTCGTCATTGGCGGTGCTCGCCGACTGCCCGGAA CTTTGACGGAGAATTTTGAACGAGTTGATAGCCACCAGGAAAAACGCCGC TGGCACCAGAAACAAATATTTTTGCATGCCGTACCGTTTCGTCTTCGTCC CGCTTGGCAGGTTCAAGGCCGTAAGCGTTCCTCAGGGCACGATCTACGGT CTAGATGTGGATCCCACCAATAACTACGTCGTGACTGTTGGTCAGGTTAG ATGTCAGGAACTGATAAGTCAGTGAACTTTGTTCTCCAATGTATTTCCCC GCTCGAAGTGACTCTCAACGTCCAGATCATCCCCCCCCCCGAGCCCTCAC CAGGAAGAAGCCGTCTTACCCCGTGTCTCCGCTTCAGGTCGGAGGTTGTC ATTTTTGCCTCATAATTTTTGTGTACTTTTGTGCACGCGAGTAACGCCCA CGAGAAGACTCATGAGTGCCACCCGCGCCATGCTTCATCGTGCTAAATGG GAAAGGTTAAGAGAAGGGTTTCAAAGAGACGTTTGACTGCCGATCACGAG AATGCAAGAATCATTTCGTTAGAACACGCTGCTTGGCAGGCGTAGCGGGA CCCGCTCGGTGGCGAGTGGCCCACCGCAACAAGCCGATATAACGTTCGTA ACCAGTAATATGATGTCGTGAAAAAGGTGTTCGCTAGGGGGTTGGGTAGC GCATCGCGGTGATGCAATTGACTCCCGTCTCGTCCCGTCCAATTTCCTAC CCCGTCAATGACATAGGACAAGCGTCTTCACATCTGGAACATCGCTTCGG GCAAGCACGTCAGGGCGTACAAGGTCGAAGGCCCGCCAACGCCACTGTCG TTGGGTGCTCAGTCAGCGGCGACGGCGCCCGTGAGGAGCAAGAGCGGTGC CGTACGGCCTGGAGGGGGAAACAAGGGAGAAAGAGGAGGGGAGCTATTCA AGATCGACCTGGATCCGACGGGCATGTACGCCGCCGCGTGCAGCTTCGAT AAGGTTTGAGCGGGATGATGAAATAGTTGTTGCGGTGTGTTGGCTGTTGA CCCTGCCTAGCTTCGTTCTGGACGAAGCGCTCACTCCTCCATGAGGACTT ACAAAGGACGAGTGCCTGCTTCTTGAGGGTTTCGCGGCACTTTTAGGTTC TTCATCCCCGCCGCGTCGTGCTTGATTTCCCTTGCACAGGCAGGAGAGGT ACATGTTCAAAACGTGTACGGTAGCGCTTCTCTCCCGCCCCCTTCTTTGG GCCTGACGCGCCGAACATACCCCCCGTGTTCATGCCGGTTTCTTCTTTTG TGCTGTTCCAACTCCGCGAAACATCCGCGCGGCCGGAATCGGTACGGATG CTTCTCCTGGTCGACGAAACTGAACCACCCTTACACCAACGGAATCTTTC ACGGCCGAACCTTTTCATAAAAAAAAGTGGATCCGATTGTTCGACTTCTA CTCCGGGAAGTGCTTGGCCACCGTTTCGGGTCACAGCGAGCTCGCAACCG GCGTTCGATTCACTCCGGACGGCCGGCGTCTAGTCTCAATCGGCGGTGAG AGGGACCCTGCTCGCTTCGTATATCCTAAATTTGCCCATAATATTGTTTG ACTGGGCTTCATTCGGTCGGGACGCGTGTTGGCGATCTCTCTTGTCGAAC CGTCGATATTTTCATTTCCCCGTCGCCCGTCGCCCCCCCCTCCCCCCCCC GCCAGCGTCCCCCCGCGAAAAATTCCTATTCCTTCACGATTTCCCCCGAC CCCGGCCTCGACAGGTGACGGAGTGATGCTAGTGTGGCGGTTGTCTCCAG ATCTCCAGCAGACTATGCGCGACCGCATGGACGAGCTGAAGGCCGCCGGT GGCGGCCAAGCGAGAGCTTGCACTGACGCAGCCGGCACGGTGAGACTGGA TCCTTCTTTGCGCTCCTCGTAATCTCGTGGTTTGCGGTTTCGTTTGAGCA ACGTCCGAGATGAGTTAATCGCGGCCACAGCGTATAGAAAAAGGTTCCAG GTGGCGTCACTCGGATGGATGGATGAATGCAATACCCCCCGGTTGTCTCG TTAGTGTTCAGTGCTGCCTCGACTTCCGGCATGCCCCACAGACGATAGCC TCGGGACCGACGCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig101:217333..220246-

>mRNA_F-serratus_M_contig101.198.1 ID=mRNA_F-serratus_M_contig101.198.1|Name=mRNA_F-serratus_M_contig101.198.1|organism=Fucus serratus male|type=CDS|length=1854bp|location=Sequence derived from alignment at F-serratus_M_contig101:217333..220246- (Fucus serratus male)
TCGTCGGGTCGAGACGGTCTTGTGCGCGTGTTTGATGCGTCTTCGGCTGC
TTCGTTGGATGGTCCGGAGAGTCCTGGCTTCCGTCTCGGTGGAAGAGAGG
GTGAGGTAGAGCGGACGAATACGGTCCAGGACGGGCCGTGCACGCGGTCC
GTAGGAACGAGGTCAGAGAGGTCGGTGGCGGCGGCAGGCGTCGCGAGACC
TTTCCCGCTCGTGAAGACGTTGGGTTGTCACACGGGCTCCGTAACGGCGG
TCAGGTTCTCGAAGGATGGGAAAAGTCGTCGGGTCGAGACGGTCTTGTGC
GCGTGTTTGATGCGTCTTCGGCTGCTTCGTTGGATGGTCCGGAGAGTCCT
GGCTTCCGTCTCGGTGGAAGAGAGGGTGAGGTAGAGCGGACGAATACGGT
CCAGGACGGGCCGTGCACGCGGTCCGTAGGAACGAGGTCAGAGAGGTCGG
TGGCGGCGGCAGGCGTCGCGAGACCTTTCCCGCTCGTGAAGACGTTGGGT
TGTCACACGGGCTCCGTAACGGCGGTCAGGTTCTCGAAGGATGGGAAAAG
GCTGATCTCGGCGGGAGGAGACAATGTGTTGGTTCTGAACAAAGTCCGAG
GGCCTGATATCCAGAGGCTGATCTCGGCGGGAGGAGACAATGTGTTGGTT
CTGAACAAAGTCCGAGGGCCTGATATCCAGAGGTTCAAGGCCGTAAGCGT
TCCTCAGGGCACGATCTACGGTCTAGATGTGGATCCCACCAATAACTACG
TCGTGACTGTTGGTCAGGTTCAAGGCCGTAAGCGTTCCTCAGGGCACGAT
CTACGGTCTAGATGTGGATCCCACCAATAACTACGTCGTGACTGTTGGTC
AGGACAAGCGTCTTCACATCTGGAACATCGCTTCGGGCAAGCACGTCAGG
GCGTACAAGGTCGAAGGCCCGCCAACGCCACTGTCGTTGGGTGCTCAGTC
AGCGGCGACGGCGCCCGTGAGGAGCAAGAGCGGTGCCGTACGGCCTGGAG
GGGGAAACAAGGGAGAAAGAGGAGGGGAGCTATTCAAGATCGACCTGGAT
CCGACGGGCATGTACGCCGCCGCGTGCAGCTTCGATAAGGACAAGCGTCT
TCACATCTGGAACATCGCTTCGGGCAAGCACGTCAGGGCGTACAAGGTCG
AAGGCCCGCCAACGCCACTGTCGTTGGGTGCTCAGTCAGCGGCGACGGCG
CCCGTGAGGAGCAAGAGCGGTGCCGTACGGCCTGGAGGGGGAAACAAGGG
AGAAAGAGGAGGGGAGCTATTCAAGATCGACCTGGATCCGACGGGCATGT
ACGCCGCCGCGTGCAGCTTCGATAAGTGGATCCGATTGTTCGACTTCTAC
TCCGGGAAGTGCTTGGCCACCGTTTCGGGTCACAGCGAGCTCGCAACCGG
CGTTCGATTCACTCCGGACGGCCGGCGTCTAGTCTCAATCGGCGTGGATC
CGATTGTTCGACTTCTACTCCGGGAAGTGCTTGGCCACCGTTTCGGGTCA
CAGCGAGCTCGCAACCGGCGTTCGATTCACTCCGGACGGCCGGCGTCTAG
TCTCAATCGGCGGTGACGGAGTGATGCTAGTGTGGCGGTTGTCTCCAGAT
CTCCAGCAGACTATGCGCGACCGCATGGACGAGCTGAAGGCCGCCGGTGG
CGGCCAAGCGAGAGCTTGCACTGACGCAGCCGGCACGGTGACGGAGTGAT
GCTAGTGTGGCGGTTGTCTCCAGATCTCCAGCAGACTATGCGCGACCGCA
TGGACGAGCTGAAGGCCGCCGGTGGCGGCCAAGCGAGAGCTTGCACTGAC
GCAGCCGGCACGACGATAGCCTCGGGACCGACGACGATAGCCTCGGGACC
GACG
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