mRNA_F-serratus_M_contig101.196.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig101.196.1
Unique NamemRNA_F-serratus_M_contig101.196.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig101.196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig101contigF-serratus_M_contig101:214704..216215 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size617
Cds size615
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig101.196.1prot_F-serratus_M_contig101.196.1Fucus serratus malepolypeptideF-serratus_M_contig101 214706..216215 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928804.2395349-CDS-F-serratus_M_contig101:214705..2149601622928804.2395349-CDS-F-serratus_M_contig101:214705..214960Fucus serratus maleCDSF-serratus_M_contig101 214706..214960 -
1690962579.8210893-CDS-F-serratus_M_contig101:214705..2149601690962579.8210893-CDS-F-serratus_M_contig101:214705..214960Fucus serratus maleCDSF-serratus_M_contig101 214706..214960 -
1622928804.2488315-CDS-F-serratus_M_contig101:215350..2154601622928804.2488315-CDS-F-serratus_M_contig101:215350..215460Fucus serratus maleCDSF-serratus_M_contig101 215351..215460 -
1690962579.8375678-CDS-F-serratus_M_contig101:215350..2154601690962579.8375678-CDS-F-serratus_M_contig101:215350..215460Fucus serratus maleCDSF-serratus_M_contig101 215351..215460 -
1622928804.257572-CDS-F-serratus_M_contig101:215708..2158891622928804.257572-CDS-F-serratus_M_contig101:215708..215889Fucus serratus maleCDSF-serratus_M_contig101 215709..215889 -
1690962579.8502145-CDS-F-serratus_M_contig101:215708..2158891690962579.8502145-CDS-F-serratus_M_contig101:215708..215889Fucus serratus maleCDSF-serratus_M_contig101 215709..215889 -
1622928804.2680633-CDS-F-serratus_M_contig101:216146..2162151622928804.2680633-CDS-F-serratus_M_contig101:216146..216215Fucus serratus maleCDSF-serratus_M_contig101 216147..216215 -
1690962579.8595479-CDS-F-serratus_M_contig101:216146..2162151690962579.8595479-CDS-F-serratus_M_contig101:216146..216215Fucus serratus maleCDSF-serratus_M_contig101 216147..216215 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig101.196.1

>prot_F-serratus_M_contig101.196.1 ID=prot_F-serratus_M_contig101.196.1|Name=mRNA_F-serratus_M_contig101.196.1|organism=Fucus serratus male|type=polypeptide|length=205bp
ESPRLLPKGFGVERTSGRCVQEEEPLEVRGHRFGSRVEEISGASPKAGYR
NNAAGASTTASSDPAQRREDEDDVEIGGSGDDDEAASLQGYSLDEDFEEM
GEAGRPEAAVGDGFDNDKAESTLNIALDPTEETEDRRAEERNSHRLSETG
AGRADSNLVLGHENWVRVESDPVLGGDPSSIPPASPDAHDPVPGRVATAA
DESKG
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mRNA from alignment at F-serratus_M_contig101:214704..216215-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig101.196.1 ID=mRNA_F-serratus_M_contig101.196.1|Name=mRNA_F-serratus_M_contig101.196.1|organism=Fucus serratus male|type=mRNA|length=1512bp|location=Sequence derived from alignment at F-serratus_M_contig101:214704..216215- (Fucus serratus male)
GAGAGTCCGAGGCTGTTGCCGAAGGGGTTCGGGGTGGAGAGGACGTCGGG
GCGTTGTGTGCAAGAGGAGGTGAGCGGTTCGACTGTCTCGCGGCACGGCG
ATTCCAGACTGTTGTTTGTGCGTGCTGCATCACGACCGGAGAGCCCCCGT
GGTTTGTCTTCGTCCTGCCGTCCGATTACTTTTTTGTATCGAGCCCTTCG
TTAAAATGGCGCTTGTTCCGGGAGGAGAACCGGCCGAGGCTGTGGAAAAA
ATTGTAGTTTCAGATTTCTCTGCTCTCTTAAACACTTCCGACTTTGGGTG
TGGGTGCGGGTGTTTTACTGTTTAAGGAGCCGCTGGAAGTTCGGGGACAC
CGTTTCGGAAGTCGGGTCGAGGAAATCTCTGGTGCGTCGCCTAAGGCAGG
GTATCGCAACAATGCTGCTGGCGCCAGCACTACAGCATCGAGCGACCCGG
CGCAGCGGCGAGAAGATGAGGACGACGTTGAGATCGGAGGTTCAGGAGAC
GACGACGGTAAGTGCGTGATGTGTTTAATCCTTGTTGCGTCATGGATCGA
GCTCTAGCTTTTCACTTGCTTGTGTCTTTCGTGAGCTCACCTGATTGGTT
TTGGACTAGCTTGGAACACGAGTATGTACTATTTTGTCTGGAACAGCATC
GTACGGTGTTGCATGAAACGCGGCGTATTTGGTTCGTAGCCTAAACAACT
TAAACAGGGATATGTTCCCACTTTCAAATGCCTGGCTCGTGGCGATTTCA
AGCAGAAGCAGCTAGTCTGCAGGGTTACTCGCTCGATGAAGATTTTGAGG
AGATGGGTGAGGCAGGCCGGCCCGAAGCGGCTGTCGGCGATGGCTTTGAC
AACGATAAAGCGGAGGTAAGGCGCGGCGAAGGCCCTCAAGCAACAGTAAC
GAAAAGGTAGAGCAACCGGTGACCGCTAACGCTGTCGCGTATGTCCGGGC
AAGAAAATTTTACGGGGTGATGACCGCGTACGAGGTCATGGGTACTCTCA
CCCCCTCTCTGCTGCTGTATCTTTCGAATAACATCGTGCCTTCCAGGGAT
TGATCTTCGGAGTGCGTACAAAAGCATTTTTTTGTCCGAGCGCGCTCAAT
GAAGCCGGTCGAAACGCAGCTCAGCCCCTCCAGCGGTCGCGGAGTTGATA
ACTCGTAGAGCCATGCAAATCATGCCTCTTCGCTTTCCCAAGCGGTAACA
AACCAAACAGTGATGCCCGTGTATGCGTCTCTCCCTTGGCGACGGCACCA
AACAGTCGACCTTGAATATAGCCCTAGACCCCACCGAAGAGACCGAAGAT
CGACGAGCAGAGGAGCGAAACAGCCATCGCCTCTCCGAAACAGGAGCTGG
GAGAGCTGACTCGAATCTTGTTCTTGGACACGAAAATTGGGTCAGAGTCG
AAAGTGACCCCGTCCTTGGCGGGGACCCTAGCTCTATCCCCCCGGCTTCG
CCCGATGCTCACGATCCCGTGCCAGGCCGCGTGGCGACTGCTGCAGACGA
ATCGAAAGGCGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig101:214704..216215-

>mRNA_F-serratus_M_contig101.196.1 ID=mRNA_F-serratus_M_contig101.196.1|Name=mRNA_F-serratus_M_contig101.196.1|organism=Fucus serratus male|type=CDS|length=1230bp|location=Sequence derived from alignment at F-serratus_M_contig101:214704..216215- (Fucus serratus male)
GAGAGTCCGAGGCTGTTGCCGAAGGGGTTCGGGGTGGAGAGGACGTCGGG
GCGTTGTGTGCAAGAGGAGGAGAGTCCGAGGCTGTTGCCGAAGGGGTTCG
GGGTGGAGAGGACGTCGGGGCGTTGTGTGCAAGAGGAGGAGCCGCTGGAA
GTTCGGGGACACCGTTTCGGAAGTCGGGTCGAGGAAATCTCTGGTGCGTC
GCCTAAGGCAGGGTATCGCAACAATGCTGCTGGCGCCAGCACTACAGCAT
CGAGCGACCCGGCGCAGCGGCGAGAAGATGAGGACGACGTTGAGATCGGA
GGTTCAGGAGACGACGACGGAGCCGCTGGAAGTTCGGGGACACCGTTTCG
GAAGTCGGGTCGAGGAAATCTCTGGTGCGTCGCCTAAGGCAGGGTATCGC
AACAATGCTGCTGGCGCCAGCACTACAGCATCGAGCGACCCGGCGCAGCG
GCGAGAAGATGAGGACGACGTTGAGATCGGAGGTTCAGGAGACGACGACG
AAGCAGCTAGTCTGCAGGGTTACTCGCTCGATGAAGATTTTGAGGAGATG
GGTGAGGCAGGCCGGCCCGAAGCGGCTGTCGGCGATGGCTTTGACAACGA
TAAAGCGGAGAAGCAGCTAGTCTGCAGGGTTACTCGCTCGATGAAGATTT
TGAGGAGATGGGTGAGGCAGGCCGGCCCGAAGCGGCTGTCGGCGATGGCT
TTGACAACGATAAAGCGGAGTCGACCTTGAATATAGCCCTAGACCCCACC
GAAGAGACCGAAGATCGACGAGCAGAGGAGCGAAACAGCCATCGCCTCTC
CGAAACAGGAGCTGGGAGAGCTGACTCGAATCTTGTTCTTGGACACGAAA
ATTGGGTCAGAGTCGAAAGTGACCCCGTCCTTGGCGGGGACCCTAGCTCT
ATCCCCCCGGCTTCGCCCGATGCTCACGATCCCGTGCCAGGCCGCGTGGC
GACTGCTGCAGACGAATCGAAAGGCTCGACCTTGAATATAGCCCTAGACC
CCACCGAAGAGACCGAAGATCGACGAGCAGAGGAGCGAAACAGCCATCGC
CTCTCCGAAACAGGAGCTGGGAGAGCTGACTCGAATCTTGTTCTTGGACA
CGAAAATTGGGTCAGAGTCGAAAGTGACCCCGTCCTTGGCGGGGACCCTA
GCTCTATCCCCCCGGCTTCGCCCGATGCTCACGATCCCGTGCCAGGCCGC
GTGGCGACTGCTGCAGACGAATCGAAAGGC
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