mRNA_F-serratus_M_contig1007.166.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: I2GFF4_9BACT (Uncharacterized protein n=2 Tax=Fibrisoma TaxID=861913 RepID=I2GFF4_9BACT) HSP 1 Score: 115 bits (287), Expect = 5.330e-24 Identity = 78/209 (37.32%), Postives = 118/209 (56.46%), Query Frame = 3
Query: 1608 DLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGR-VDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYVHAVGPLVPRKMKMSLLEAFWQ*HSSNARQ 2231
DLS S + V+DEVKR ++V +LVN+AGI G+ D + + +QLN+A +T F KE V R G+I+++ SI + PNP +AVY A+KS++ SF+EAL +EL+ + V VT +MP AT T F + +G+ AD VA EALM G ++ G +NK+ V A G ++P ++ S + + S +Q
Sbjct: 65 DLSKSESPQQVYDEVKRQGLTVNVLVNNAGIGEHGKFATETDLQKELGIIQLNIASVVQLTKLFTKEMVERNEGKILMLGSIASVLPNPLMAVYGATKSFIYSFSEALRNELKDTNVTVTVLMPGATDTDFFNKAGAMNTKAQEQARSTNPAD-VAKTGYEALMAGKDKVVHGLMNKVQV-AGGYVLPDQVVTSNVRKLMEDKDSPQKQ 271
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A150ALT9_9BACT (Short-chain dehydrogenase n=1 Tax=Flammeovirga sp. SJP92 TaxID=1775430 RepID=A0A150ALT9_9BACT) HSP 1 Score: 112 bits (280), Expect = 7.040e-24 Identity = 64/199 (32.16%), Postives = 117/199 (58.79%), Query Frame = 3
Query: 1602 AADLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPG--WINKLYVHAVGPLVPRKMKMSLL 2192
A +L++ A +++EVK I ++ L+N+AG +G+ E ++ +Q+N+ T++T F +F+ R G+I+ VSS + P P AVY ASK+Y++SF ++ EL +GV T ++P AT+T FG +SG + ++R P A++VA +A++ G +I G W ++ + ++ PL+P+KM + ++
Sbjct: 59 AKNLTHPDATREIYEEVKAQGIEIDYLINNAGFGGIGKFHQRAWEKDLAMIQVNILALTSLTRFFLPDFIERNSGKILNVSSTVSLVPGPMQAVYFASKAYVTSFTNSISGELMGTGVSATALLPGATQTGFGASSGMDKTSIYRKPA---SANDVARDGYQAMLEGKLEIISGLPWSQRMQL-SITPLLPKKMVVEMV 253
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A345H181_9FLAO (Sulfoacetaldehyde reductase n=1 Tax=Kordia sp. SMS9 TaxID=2282170 RepID=A0A345H181_9FLAO) HSP 1 Score: 112 bits (279), Expect = 9.560e-24 Identity = 74/222 (33.33%), Postives = 123/222 (55.41%), Query Frame = 3
Query: 1515 VEQNVGRKMGLKDSSPSPHLSKAITARWFAADLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPG--WINKLYVHAVGPLVPRK 2174
V ++ G+ LK S H I DL++S AA +++EVK N+ V+ L+N+AG +GR D D + ++ +QLN++ TA++H F ++FV R G+I+ VSS + P AVY A+K++++SF+ A+ EL + + VT +MP AT T FG SG + ++ A VA A+++GD ++ G + KL + + P +P+K
Sbjct: 32 VARSEGKLKALKTELESAHN---INVTVIVKDLTDSNAAQEIYEEVKAANLKVDYLINNAGFGGLGRFDKRDLQTDLNMIQLNISALTALSHHFLQDFVMRNEGKILNVSSTASLVAGPLQAVYYATKAFVTSFSNAIAEELHDTNITVTNLMPGATETDFGSTSGMDKTEIFEKTA---SARSVAEDGYTAMLKGDLDIMSGLTFAQKLMMK-MAPFMPKK 246
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A2A8Q110_BACCE (SDR family oxidoreductase n=24 Tax=Bacillus TaxID=1386 RepID=A0A2A8Q110_BACCE) HSP 1 Score: 111 bits (278), Expect = 1.330e-23 Identity = 71/192 (36.98%), Postives = 112/192 (58.33%), Query Frame = 3
Query: 1599 FAADLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYVHAVGPLVPRK 2174
FA DL N T ++ +K I ++IL+N+AG G + +D + + LQLN+ T +T FA + +R++G+I+ V+S+ A P P +++Y ASKSY+ SF+EA+ EL+ +GV V+ + PS T+TA A V+ ML + +VA E LM+ R +IPG+ N+L +V L+PRK
Sbjct: 58 FAGDLGNYTTVESLHRYLKTEGIDIDILINNAGAGGFGLMTEVDIQKELEYLQLNMISLTYLTRLFADDMAKRKQGKILNVASLAAFQPVPRMSMYGASKSYVLSFSEAIAEELKGTGVQVSVLCPSFTKTALTQQFAGAGTKVFNKNML--DPQKVAKCGFEGLMKNKRVIIPGFKNQLMAKSVA-LLPRK 246
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A101GC21_9BACT (Short-chain dehydrogenase n=3 Tax=Candidatus Marinimicrobia TaxID=62680 RepID=A0A101GC21_9BACT) HSP 1 Score: 111 bits (278), Expect = 1.740e-23 Identity = 67/182 (36.81%), Postives = 109/182 (59.89%), Query Frame = 3
Query: 1599 FAADLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYV 2144
F DLS A A + +++ +ISV++LVN+AG + R + D +++ + LNV +T ++ G I+ V+SI A P P++AVY A+K+++ SF+EALH EL+S G+ VTC+ P T+T FG SG +L+++ M A+EVA +A + M+G ++PG+ NKL +
Sbjct: 71 FPMDLSLPNAPAMLVKQLENQHISVDVLVNNAGYGLLERFHTSDINRILNMISLNVNNLVHLTAMLTPAMTVQKSGGILNVASIAAFVPGPNMAVYYATKAFVLSFSEALHEELKSYGITVTCLAPGPTKTRFGKVSGMESSLIFQ--MGTQNAEEVAQKAYQGFMKGKAVVVPGFKNKLTI 250 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1007.166.1 >prot_F-serratus_M_contig1007.166.1 ID=prot_F-serratus_M_contig1007.166.1|Name=mRNA_F-serratus_M_contig1007.166.1|organism=Fucus serratus male|type=polypeptide|length=707bp MTGSKRLLAGPLLLLLPGFQRGDAFGVSFANRPPVLVGSSEPLSIGRVRSback to top mRNA from alignment at F-serratus_M_contig1007:169324..196202+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1007.166.1 ID=mRNA_F-serratus_M_contig1007.166.1|Name=mRNA_F-serratus_M_contig1007.166.1|organism=Fucus serratus male|type=mRNA|length=26879bp|location=Sequence derived from alignment at F-serratus_M_contig1007:169324..196202+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1007:169324..196202+ >mRNA_F-serratus_M_contig1007.166.1 ID=mRNA_F-serratus_M_contig1007.166.1|Name=mRNA_F-serratus_M_contig1007.166.1|organism=Fucus serratus male|type=CDS|length=4242bp|location=Sequence derived from alignment at F-serratus_M_contig1007:169324..196202+ (Fucus serratus male)back to top |