mRNA_F-serratus_M_contig1007.166.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: W7UCJ3_9STRA (Short-chain dehydrogenase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7UCJ3_9STRA) HSP 1 Score: 119 bits (297), Expect = 3.110e-25 Identity = 75/194 (38.66%), Postives = 108/194 (55.67%), Query Frame = 3 Query: 1605 ADLSNSTAAAAVFDEVKR-LNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYVHAVGPLVPRKMKM 2183 ADLS AA V++ V R + V LVN+AG+ + + + LN T + F +E R RGRIM VSSI A+P P VAVY+ASK+++SSF A+ ELE GV VT ++P AT T F + + A + +P L M AD VA V ++RGD ++PG +N+ +V A L P+ +++ Sbjct: 153 ADLSCPEAARRVYESVVREKGLQVSALVNNAGVGYTDSFLKMPTAKIEEIVHLNALSLTQLCWLFGQEMASRGRGRIMCVSSIAGAAPGPLVAVYSASKAFVSSFTLAIQHELEPGGVSVTNLLPGATFTEFQARAHAQAAAAFSVPGLAMPADRVAREGVTGMLRGDSVVVPGLVNQAFVLATAVLPPKLLRL 346
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A7S2VVE0_9EUKA (Hypothetical protein n=1 Tax=Norrisiella sphaerica TaxID=552664 RepID=A0A7S2VVE0_9EUKA) HSP 1 Score: 115 bits (288), Expect = 4.260e-25 Identity = 74/199 (37.19%), Postives = 107/199 (53.77%), Query Frame = 3 Query: 1608 DLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYVHAVGPLVPRKMKMSLLEAFW 2204 DL+ AA + + + +LVN+AG G ++D ++V + L+LNV T +T + V + GRI+ VSSIT S PS AVYAA+K+YLS F +L EL SGV VTC++P AT T F + SG AL++++P L A VA V A++ G +I GW + L G + P + + FW Sbjct: 15 DLALPGAAGKISSWALEKGLVISLLVNNAGFSVRGNFCAIDNKNVDTILKLNVISATELTREVLPQMVAKGYGRILFVSSITGISAQPSQAVYAATKAYLSQFCSSLRFELRYSGVQVTCLLPGATITGFAEISGIENALIFKVPTLQSSAASVAEAGVNAMLAGQSKVITGWFSHL-AWFCGWMFPEDLVAWVAFIFW 212
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A3M0WQ62_9BACT (SDR family oxidoreductase n=1 Tax=Ignavibacteria bacterium TaxID=2053306 RepID=A0A3M0WQ62_9BACT) HSP 1 Score: 115 bits (289), Expect = 4.720e-25 Identity = 67/187 (35.83%), Postives = 110/187 (58.82%), Query Frame = 3 Query: 1584 ITARWFAADLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYV 2144 I + F DLS+S A +FDE+K+ N+ V+IL+N+AG G +DE+ + LN+ T ++ F +E + G+I+ V+S A P P +AVY A+K+Y+ SF+EA+ EL G+ V+ + P T T F D +G+ ++++ + L M+A+ A+ A M+G R +IPG +NK+ V Sbjct: 54 IDVKIFVYDLSDSEQAIGLFDEIKKQNLKVDILINNAGFGMYGEFLEIDEKSEQQMIHLNIETLTLLSKLFGREMAKNGGGKILNVASTAAFQPGPGMAVYYATKAYVLSFSEAISYELRPLGIQVSTLCPGPTDTEFHDRAGTRKSVI--MQKLNMDAETCASIAYRQFMKGKRLIIPGLMNKIGV 238
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: UPI00165F976B (SDR family NAD(P)-dependent oxidoreductase n=2 Tax=unclassified Flammeovirga TaxID=2637820 RepID=UPI00165F976B) HSP 1 Score: 114 bits (286), Expect = 1.150e-24 Identity = 67/194 (34.54%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 1602 AADLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPG--WINKLYVHAVGPLVPRKM 2177 A +L++ A +++EVK I VE L+N+AG VG+ E ++ +Q+N+ T++T F +F+ + G+I+ VSS + P P AVY ASK++++SF ++ EL +GV T ++P AT+T FG NSG + +++ P A +VA EA+++G+ +I G W K+ + ++ PL+P+KM Sbjct: 59 AKNLTHPDATREIYEEVKAQGIQVEYLINNAGFGGVGKFHERAWEKDLAMIQVNILALTSLTRFFLPDFIEKNTGKILNVSSTVSLLPGPMQAVYFASKAFVTSFTNSISGELMGTGVSATALLPGATQTGFGANSGMDKTSIYKKPA---SASDVAKDGYEAMIKGELEVISGLPWSQKMQL-SITPLLPKKM 248
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: UPI001662CF8D (SDR family oxidoreductase n=1 Tax=Hymenobacter cavernae TaxID=2044852 RepID=UPI001662CF8D) HSP 1 Score: 114 bits (286), Expect = 1.330e-24 Identity = 78/218 (35.78%), Postives = 121/218 (55.50%), Query Frame = 3 Query: 1515 VEQNVGRKMGLKDSSPSPHLSKAITARWFAADLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYVHAVGPLVP 2168 V+QN G G + S H IT DL AA V+DEV+ + V+IL+N AG G D ++ + N+ T +T+ F ++ +R +GRI+ ++S+ + PNP++AVYAASK+Y+ SFAEAL +EL+ SGV VT + P AT T F + +G+A+ + + +VA EALM+G+ +I G NK+ +G ++P Sbjct: 37 VDQNPGGLQGFAEHLQSVHH---ITPTLITQDLGEPGAAQKVYDEVQSQGLQVDILINDAGFGVAGPFLEADLNRNVALINTNITALTELTYLFGRDMKQRGKGRILQLASLASFQPNPNLAVYAASKAYVLSFAEALTTELKDSGVTVTALCPGATETEFFETAGAADTKEGQSEKA--DPKDVAKDGYEALMKGEPRVISGVKNKIMA-TLGNVIP 248
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A553FZ51_9BACT (SDR family oxidoreductase n=1 Tax=Carboxylicivirga sp. M1479 TaxID=2594476 RepID=A0A553FZ51_9BACT) HSP 1 Score: 114 bits (284), Expect = 2.030e-24 Identity = 70/194 (36.08%), Postives = 116/194 (59.79%), Query Frame = 3 Query: 1608 DLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWI-NKLYVHAVGPLVPRKMKMS 2186 DL+ TAA V+DEVK+ ++++IL+N+AG +G+ + + E +M + LNV T +T F +F+ R RG+++ VSS + P P AVY A+K+Y++SF+ A+ EL ++ V VT +MP AT T FG SG + +++ + M VA A+M+G +I G ++ + A+ P +P+KM +S Sbjct: 60 DLTKLTAAQEVYDEVKKTGLNIDILINNAGFGGLGQFNEQNPELLMQMINLNVTTLTLLTRLFMPDFLERNRGKVLNVSSTASLMPGPLQAVYFATKAYVTSFSNAIAEELHNTDVTVTNLMPGATETDFGSRSGMDKTEMFKTAVSSMG---VAKAGYAAMMKGKLDVISGLTTSQKMMMAMIPFMPKKMMLS 250
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A1W1XL38_9CLOT (Uncharacterized protein n=1 Tax=Clostridium acidisoli DSM 12555 TaxID=1121291 RepID=A0A1W1XL38_9CLOT) HSP 1 Score: 113 bits (283), Expect = 2.690e-24 Identity = 67/192 (34.90%), Postives = 113/192 (58.85%), Query Frame = 3 Query: 1608 DLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYVHAVGPLVPRKMKM 2183 DL +A VF+E+K+LN+ ++IL+N+AGI VG S+ E M +QLN+ T +T FA+E ++ ++G+I+ V+S + +P P +A+Y A+K+Y+ SF+ A+ EL+ + V+ + P AT+T F +G ++ + P ++A A + L+R R ++PG NK+ V LV MKM Sbjct: 59 DLCEEFSAEEVFNEIKKLNLKIDILINNAGIGNVGLFSSISIEKDMEMIQLNIIALTKLTKLFAEEMIKMKKGKILNVASTGSFTPGPYIAIYYATKAYVLSFSRAVSEELKPYNITVSALCPGATKTNFAKRAGRKDSTLASNP------SKIAKIAYKQLLRDKRVIVPGITNKILVKLPSNLV---MKM 241
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: UPI001FF59417 (SDR family oxidoreductase n=1 Tax=Muricauda sp. SCSIO 64092 TaxID=2908842 RepID=UPI001FF59417) HSP 1 Score: 113 bits (283), Expect = 2.950e-24 Identity = 69/191 (36.13%), Postives = 111/191 (58.12%), Query Frame = 3 Query: 1608 DLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPG--WINKLYVHAVGPLVPRK 2174 +L+ TA ++DEV I V+ L+N+AG VG D + +Q+NV T++T F +FV R GRI+ VSS + P P AVY A+K+Y++SF++ALH EL +GV +T ++P AT+TAFGD+SG + +++ P A +VA +A+ G+ +I G W ++ + + P + +K Sbjct: 63 NLTQLTAPQEIYDEVLHQGIEVDYLINNAGFGGVGAFHERDWAKDQAMIQVNVLALTSLTRQFLPDFVARDSGRILNVSSTVSLVPGPLQAVYFATKAYVTSFSQALHGELSDTGVSMTALLPGATKTAFGDSSGMDKTPIYKKPA---SARDVAEEGYKAMENGEIQVIAGLPWEQRMELKFI-PFMSKK 249
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A537V9I7_9PROT (SDR family oxidoreductase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537V9I7_9PROT) HSP 1 Score: 113 bits (283), Expect = 3.550e-24 Identity = 70/193 (36.27%), Postives = 106/193 (54.92%), Query Frame = 3 Query: 1605 ADLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITAASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATRTAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYVHAVGPLVPRKMKM 2183 ADLS AAAA+ D++ + ++ILVN+AG+ +GR D +D + LQ+N+ T +T + R GRIM+VSS+ P P +AVY A+K+Y++S EAL EL +GV VT + P AT T F +G+ + + M AD+VA L G R +I G +NK+ + G P ++ + Sbjct: 62 ADLSKPGAAAALADDLAAGGLDIDILVNNAGLGALGRFDRMDPSRIGDMLQVNIVALTELTRLLLPGMIARGHGRIMLVSSVAGFQPGPRMAVYFATKAYVTSLGEALAYELRRTGVSVTVLCPGATETEFFSVAGATNSSMSARMRRMMRADDVARIGYRGLAAGRRLVIAGMMNKV-LGLAGHFAPHRLSL 253
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Match: A0A448Z7W5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7W5_9STRA) HSP 1 Score: 120 bits (301), Expect = 5.190e-24 Identity = 70/199 (35.18%), Postives = 118/199 (59.30%), Query Frame = 3 Query: 1605 ADLSNSTAAAAVFDEVKRLNISVEILVNSAGICRVGRVDSLDEEDVMSQLQLNVAGTTAITHPFAKEFVRRQRGRIMIVSSITA-ASPNPSVAVYAASKSYLSSFAEALHSELESSGVGVTCVMPSATR-TAFGDNSGSAEALVWRLPMLCMEADEVAARAVEALMRGDRALIPGWINKLYVHAVGPLVPRKMKMSLLE 2195 ADLS + AA + ISV+IL+N+AG+ G D D+ + LN T ++ + ++ +++RGR++++SS+ + P+ AVY A K++ S A ++ E+ES GVGVTC+MP A T F +SG+ ALVW LP D VA + V +L+ GD +PGW N+++ + V P++P+++++ L++ Sbjct: 528 ADLSKADAAERIKQATDDAGISVDILINNAGVATEGLAVDADTSDIERMVLLNSLTYTKLSVLYGRDMKKKRRGRMLMMSSMAGLCNGAPNTAVYGACKAFGKSLALSMAREMESYGVGVTCLMPGAVLDTDFRRSSGTRRALVWYLPFYSRSPDMVAHQGVMSLLDGDTRSVPGWQNRVFANIVRPIIPQRVEIMLVQ 726 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1007.166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1007.166.1 >prot_F-serratus_M_contig1007.166.1 ID=prot_F-serratus_M_contig1007.166.1|Name=mRNA_F-serratus_M_contig1007.166.1|organism=Fucus serratus male|type=polypeptide|length=707bp MTGSKRLLAGPLLLLLPGFQRGDAFGVSFANRPPVLVGSSEPLSIGRVRSback to top mRNA from alignment at F-serratus_M_contig1007:169324..196202+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1007.166.1 ID=mRNA_F-serratus_M_contig1007.166.1|Name=mRNA_F-serratus_M_contig1007.166.1|organism=Fucus serratus male|type=mRNA|length=26879bp|location=Sequence derived from alignment at F-serratus_M_contig1007:169324..196202+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1007:169324..196202+ >mRNA_F-serratus_M_contig1007.166.1 ID=mRNA_F-serratus_M_contig1007.166.1|Name=mRNA_F-serratus_M_contig1007.166.1|organism=Fucus serratus male|type=CDS|length=4242bp|location=Sequence derived from alignment at F-serratus_M_contig1007:169324..196202+ (Fucus serratus male)back to top |