mRNA_F-serratus_M_contig1005.157.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7S2RMS8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMS8_9STRA) HSP 1 Score: 218 bits (556), Expect = 4.140e-62 Identity = 118/224 (52.68%), Postives = 153/224 (68.30%), Query Frame = 3 Query: 84 SRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNN-GDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVL 752 SR + VA + W +M ILVA+ KKDTSST+GM+TSV+TSPLL +AR+V RLA IEKAY R+F+ FG+ TM DSN FHATCLDT+PPIFY+ND +SR +I ++HA+N ++ EIRAAYTFDAGPNAV++ L K + LL+ +L ++P P S++ SR + N G++ A D A+ GL A TGRTP GDVKM+Y T G PRVL Sbjct: 195 SRAVPVASKEDWEDMATVILVANDKKKDTSSTSGMNTSVETSPLLAFRAREVVDGRLAAIEKAYRARNFSEFGQLTMADSNQFHATCLDTYPPIFYLND---VSRQIIRLVHAFNDYYGEIRAAYTFDAGPNAVIFVLKKHQSALLSYMLHYFPPP---SMDATPSRFQSFSNRPGEV---AVALDTAVDPGLIAAGDATGRTPVPGDVKMVYLTGVGDGPRVL 409
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: B7S422_PHATC (Diphosphomevalonate decarboxylase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7S422_PHATC) HSP 1 Score: 198 bits (503), Expect = 1.920e-55 Identity = 115/236 (48.73%), Postives = 139/236 (58.90%), Query Frame = 3 Query: 84 SRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLD-DKGRMLDLESG 788 SR ++ADE WP +RA I V S +KDT+STAGM SV+TSPLL +A V P R+ E+ +A+ RDF FGK TMQDSN FHATCLDT+PPIFYMND +SR +I I+ AYN + EIRAAYT DAGPN V+Y L L ALL F+PA G +E E+ D L L A TGR P GDV+ Y T+ G PRVLD D +D +G Sbjct: 197 SRAEQLADEASWPALRAVIAVVSDAQKDTASTAGMQASVKTSPLLAFRAAHVVPQRMQELTQAWRRRDFPVFGKITMQDSNQFHATCLDTYPPIFYMND---VSRQIIRIVTAYNDYAGEIRAAYTLDAGPNVVLYVLEPHRPVLAALLRHFFPASG---LE-------------------EQNDEVLDPALVHAAEATGRVPRDGDVRHYYVTRPGPGPRVLDNDADGTIDPHTG 407
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A1Z5KG56_FISSO (Diphosphomevalonate decarboxylase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KG56_FISSO) HSP 1 Score: 197 bits (501), Expect = 3.350e-55 Identity = 112/225 (49.78%), Postives = 140/225 (62.22%), Query Frame = 3 Query: 117 WPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAP-GDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788 WP++RA +LV S KKDTSST GM TSVQTS LL +A+ + P RL +E+A RDF +F + TMQDSN FHATCLDT+PPIFYMND ISR ++ I+ YN++ E+RAAYTFDAGPNAV+Y L + L ALL ++P P G S D +S AL E L +AC +TGR P GDV+ +Y TK G P V+ D LD E+G Sbjct: 200 WPQLRALLLVVSDSKKDTSSTTGMQTSVQTSMLLQYRAQHIVPARLQAMEQACHARDFGTFAQLTMQDSNQFHATCLDTYPPIFYMND---ISRQIVRIVTVYNSWAGELRAAYTFDAGPNAVIYCLEQHQQHLAALLCHYFPIPKGALSGLDTSSM-------------------ALEESLLQACNETGRIPRMGDVQTMYATKPGPGPLVVTDVCN-LDPETG 401
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A8K1CEZ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEZ2_PYTOL) HSP 1 Score: 197 bits (500), Expect = 8.970e-55 Identity = 115/264 (43.56%), Postives = 152/264 (57.58%), Query Frame = 3 Query: 75 GFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGS-----VEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESGDVI---------DPTPSCSNG 824 G S + VADEHHWP +RA I V + +KDTSST+GM TS +TS LL + V RL +IE AY RDFA+FG+ TM+DSN FHA CLDT+PPIFYMN+ +SR +I I+H +N FH +RAAYTFDAGPNAV++ KD A +LALL ++P DG +AS ++ N A+ L+ T +P+ G +K +Y T+ GG RVL ++DL +G +P PS S G Sbjct: 172 GSDSLAVRVADEHHWPALRAIICVVNDREKDTSSTSGMKTSKETSTLLQHRVASVVDGRLEQIEAAYQARDFATFGELTMRDSNQFHAVCLDTYPPIFYMNE---VSRKIIHIVHRFNTFHGAVRAAYTFDAGPNAVIFLEDKDVAAVLALLQTYFPTTRDGGSLPIQTVSSASELHQWRN------------ASFPADLRAM---TQVSPSPGGIKSLYVTRVGGGTRVLATNESLVDLTTGKPRIPRVEKTKEEPAPSPSRG 417
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: K3WFN8_GLOUD (Diphosphomevalonate decarboxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFN8_GLOUD) HSP 1 Score: 196 bits (498), Expect = 1.530e-54 Identity = 115/282 (40.78%), Postives = 162/282 (57.45%), Query Frame = 3 Query: 75 GFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESGDVIDPTPSCSNGTSS*ETR*STRY-RG*HAGAGCPRVT*PHSIG 917 G SR ++VADEH+W E+ A I V + +KDTSST+GM TS TS LL +A V RLA +E+AYL +DF SFGK TMQDSN FHATCLDT+PPIFY+ND ISR +I ++HAYNA +++AAYTFDAGPNAV++ + E+++LLL+ +P+ ++ + G+ MK P G +KM Y ++ GG RVL + ++DLE+G+ P S+ +S + R + R H A P + ++G Sbjct: 167 GRDSRAVQVADEHYWKELCAIICVVNDKEKDTSSTSGMKTSKDTSALLQFRADHVVDDRLAVMERAYLAKDFVSFGKLTMQDSNQFHATCLDTYPPIFYLND---ISRKIIHLVHAYNAQAGKVQAAYTFDAGPNAVIFLEEQHVQEVMSLLLQCFPSSSPVEIKSSIPVDGKASTLVSSMKLP--------------------APTQGGIKMFYVSRVGGGTRVLGPQEALVDLETGE-----PLLSSSSSRQKERSDCFWARQIHENAWFPYIVGAAAVG 420
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7S2DKF6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DKF6_9STRA) HSP 1 Score: 190 bits (483), Expect = 2.740e-53 Identity = 113/250 (45.20%), Postives = 152/250 (60.80%), Query Frame = 3 Query: 84 SRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEAD---AALSEGLQEACL-KTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESGDVIDPTPSCSN 821 SR M+VA + WP + A I+V + KKDTSST GM SV TS LL +A++V RL EI+ AYL RDF +FG TM DSN FHATC DT PPIFYM D +S++V+ ++H YNA D IRAAYTFDAGPNAV++ + LA +LR++P ++S N +++ EA + D A S+G + A + ++ R P G V+MIY T+ G PRVL ++DL +G TP C+N Sbjct: 8 SRAMQVAPQDTWPSLHALIMVVNDAKKDTSSTNGMIRSVNTSKLLSFRAKEVVDGRLEEIKAAYLSRDFETFGNLTMMDSNQFHATCQDTHPPIFYMTD---VSKAVVQLVHGYNACFDRIRAAYTFDAGPNAVIFVEEEHRQHFLAFMLRYFPF---------VTKS----NKPELLLEARKIDLEAAVTSKGDEVASMSESSRVP--GSVRMIYCTRVGDGPRVLTPADSLMDLRNG-----TP-CAN 233
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A1W0A6I2_9STRA (Diphosphomevalonate decarboxylase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6I2_9STRA) HSP 1 Score: 192 bits (488), Expect = 6.170e-52 Identity = 105/238 (44.12%), Postives = 144/238 (60.50%), Query Frame = 3 Query: 75 GFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788 G S ++VAD HWPE+ A I V + +KDTSST+GM TS TS LLG +AR+V RL IE AY +DFA+FGK TM DSN FHATCLDT+PPIFYMN+ +SRS+I ++H YN F ++AAYTFDAGPNAV++ ++++E+L LLL ++ GD V + ++ D++ LK P A +KMIY+T G +VL +++L +G Sbjct: 340 GSDSLAVQVADHEHWPELEAIICVVNDKEKDTSSTSGMMTSKDTSELLGFRAREVVDKRLTAIEAAYKAKDFATFGKITMMDSNQFHATCLDTYPPIFYMNE---VSRSIIHMVHKYNDFKGGVKAAYTFDAGPNAVIFVEKQNTSEVLGLLLNYFDQAGDLEVRGDFDKTKAVKPVADLLNS----------------LKIAAAPGA--LKMIYHTTVGEGRKVLPASESLINLATG 556
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A8K0EJH2_BRALA (MVD protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0EJH2_BRALA) HSP 1 Score: 188 bits (478), Expect = 7.480e-52 Identity = 106/239 (44.35%), Postives = 147/239 (61.51%), Query Frame = 3 Query: 75 GFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNN-GDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788 G S ++A HWPE+R ++V + GKK ST GM T+V+TS L+ +A V P R E+ +A LERDF +FG+ TM+DSN FHATCLDT+PPIFY+N+ S + +I ++H YN H +IRAAYTFDAGPNAV+Y L +D E+LAL F+PA +N+ R ++V D+ ++ AD S GL+ P+ G V+ I +TK G P+VL D + L E+G Sbjct: 183 GSDSIAKQIAPADHWPELRVLVVVVNAGKKAVGSTEGMQTTVKTSALIKYRAEHVVPSRQEEMRQAVLERDFQTFGEITMKDSNQFHATCLDTYPPIFYLNETS---KHIIHLVHRYNQHHGKIRAAYTFDAGPNAVLYLLQEDLPEVLALFHHFFPA-----TTNNSER--QFVRGLPDVQRKELSADLLDSVGLE---------PSPGSVQYIIHTKAGEDPQVLTDPQQALLDENG 402
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7K9EPJ1_BARMA (MVD1 decarboxylase (Fragment) n=1 Tax=Baryphthengus martii TaxID=176943 RepID=A0A7K9EPJ1_BARMA) HSP 1 Score: 182 bits (463), Expect = 1.050e-51 Identity = 102/226 (45.13%), Postives = 133/226 (58.85%), Query Frame = 3 Query: 96 EVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRML 773 +VA E HWPE+R +LV S KK STAGM TSV+TSPLL +A V P RL + + ERDF +FG+ TMQDSN FHATCLDTFPPIFY+ND +SRS+I ++H +NA H + AYTFDAGPNAVV+ LA AE + ++ R +P +G ++ AAL E L A + P G V+ I +T+ G P+++ D R L Sbjct: 18 QVAPETHWPELRVLVLVVSGEKKQVGSTAGMQTSVETSPLLKHRAEVVVPERLELMMRHIRERDFEAFGRLTMQDSNQFHATCLDTFPPIFYLND---VSRSIIALVHRFNAHHGRTKVAYTFDAGPNAVVFALADTVAEFVEVVRRSFPPAANGDR---------------FVRGLPVGSAALPEELLAAVVTE---PVPGGVRYILHTQPGPGPQLVTDPSRHL 222
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A485L4T9_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4T9_9STRA) HSP 1 Score: 186 bits (473), Expect = 3.170e-51 Identity = 107/238 (44.96%), Postives = 145/238 (60.92%), Query Frame = 3 Query: 75 GFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788 G S +++AD+ HWPE+ A I V + +KDTSST GM TS TS LL +AR+V RLA IE AYL +DF +FGK TM DSN FHATCLDT+PPIFYMN+ ISR++I ++H YN +I+AAYTFDAGPNAV++ K + E++ALL F+ D +VE +I + + + + +KT TP A +KM+Y+T G RVL ++DL +G Sbjct: 178 GTDSLAIQIADDKHWPELEAIICVVNDKEKDTSSTDGMMTSKNTSDLLHFRAREVVDKRLAAIEAAYLAKDFETFGKITMMDSNQFHATCLDTYPPIFYMNE---ISRNIINLVHKYNDAAGKIQAAYTFDAGPNAVIFLEKKHTQEVVALLRHFF----DSAVEPL-----------EIRGPVDTTTLPAVDAVLLSSIKTQPTPGA--LKMLYHTTVGDGRRVLPASESLIDLATG 395 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1005.157.1 >prot_F-serratus_M_contig1005.157.1 ID=prot_F-serratus_M_contig1005.157.1|Name=mRNA_F-serratus_M_contig1005.157.1|organism=Fucus serratus male|type=polypeptide|length=269bp MANIEFPTPRVVISPGFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTback to top mRNA from alignment at F-serratus_M_contig1005:114916..118841+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1005.157.1 ID=mRNA_F-serratus_M_contig1005.157.1|Name=mRNA_F-serratus_M_contig1005.157.1|organism=Fucus serratus male|type=mRNA|length=3926bp|location=Sequence derived from alignment at F-serratus_M_contig1005:114916..118841+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1005:114916..118841+ >mRNA_F-serratus_M_contig1005.157.1 ID=mRNA_F-serratus_M_contig1005.157.1|Name=mRNA_F-serratus_M_contig1005.157.1|organism=Fucus serratus male|type=CDS|length=1614bp|location=Sequence derived from alignment at F-serratus_M_contig1005:114916..118841+ (Fucus serratus male)back to top |