mRNA_F-serratus_M_contig1005.157.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1005.157.1
Unique NamemRNA_F-serratus_M_contig1005.157.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7S2RMS8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMS8_9STRA)

HSP 1 Score: 218 bits (556), Expect = 4.140e-62
Identity = 118/224 (52.68%), Postives = 153/224 (68.30%), Query Frame = 3
Query:   84 SRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNN-GDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVL 752
            SR + VA +  W +M   ILVA+  KKDTSST+GM+TSV+TSPLL  +AR+V   RLA IEKAY  R+F+ FG+ TM DSN FHATCLDT+PPIFY+ND   +SR +I ++HA+N ++ EIRAAYTFDAGPNAV++ L K  + LL+ +L ++P P   S++   SR   + N  G++   A   D A+  GL  A   TGRTP  GDVKM+Y T  G  PRVL
Sbjct:  195 SRAVPVASKEDWEDMATVILVANDKKKDTSSTSGMNTSVETSPLLAFRAREVVDGRLAAIEKAYRARNFSEFGQLTMADSNQFHATCLDTYPPIFYLND---VSRQIIRLVHAFNDYYGEIRAAYTFDAGPNAVIFVLKKHQSALLSYMLHYFPPP---SMDATPSRFQSFSNRPGEV---AVALDTAVDPGLIAAGDATGRTPVPGDVKMVYLTGVGDGPRVL 409          
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: B7S422_PHATC (Diphosphomevalonate decarboxylase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7S422_PHATC)

HSP 1 Score: 198 bits (503), Expect = 1.920e-55
Identity = 115/236 (48.73%), Postives = 139/236 (58.90%), Query Frame = 3
Query:   84 SRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLD-DKGRMLDLESG 788
            SR  ++ADE  WP +RA I V S  +KDT+STAGM  SV+TSPLL  +A  V P R+ E+ +A+  RDF  FGK TMQDSN FHATCLDT+PPIFYMND   +SR +I I+ AYN +  EIRAAYT DAGPN V+Y L      L ALL  F+PA G   +E                   E+ D  L   L  A   TGR P  GDV+  Y T+ G  PRVLD D    +D  +G
Sbjct:  197 SRAEQLADEASWPALRAVIAVVSDAQKDTASTAGMQASVKTSPLLAFRAAHVVPQRMQELTQAWRRRDFPVFGKITMQDSNQFHATCLDTYPPIFYMND---VSRQIIRIVTAYNDYAGEIRAAYTLDAGPNVVLYVLEPHRPVLAALLRHFFPASG---LE-------------------EQNDEVLDPALVHAAEATGRVPRDGDVRHYYVTRPGPGPRVLDNDADGTIDPHTG 407          
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A1Z5KG56_FISSO (Diphosphomevalonate decarboxylase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KG56_FISSO)

HSP 1 Score: 197 bits (501), Expect = 3.350e-55
Identity = 112/225 (49.78%), Postives = 140/225 (62.22%), Query Frame = 3
Query:  117 WPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAP-GDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788
            WP++RA +LV S  KKDTSST GM TSVQTS LL  +A+ + P RL  +E+A   RDF +F + TMQDSN FHATCLDT+PPIFYMND   ISR ++ I+  YN++  E+RAAYTFDAGPNAV+Y L +    L ALL  ++P P G  S  D +S                    AL E L +AC +TGR P  GDV+ +Y TK G  P V+ D    LD E+G
Sbjct:  200 WPQLRALLLVVSDSKKDTSSTTGMQTSVQTSMLLQYRAQHIVPARLQAMEQACHARDFGTFAQLTMQDSNQFHATCLDTYPPIFYMND---ISRQIVRIVTVYNSWAGELRAAYTFDAGPNAVIYCLEQHQQHLAALLCHYFPIPKGALSGLDTSSM-------------------ALEESLLQACNETGRIPRMGDVQTMYATKPGPGPLVVTDVCN-LDPETG 401          
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A8K1CEZ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEZ2_PYTOL)

HSP 1 Score: 197 bits (500), Expect = 8.970e-55
Identity = 115/264 (43.56%), Postives = 152/264 (57.58%), Query Frame = 3
Query:   75 GFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGS-----VEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESGDVI---------DPTPSCSNG 824
            G  S  + VADEHHWP +RA I V +  +KDTSST+GM TS +TS LL  +   V   RL +IE AY  RDFA+FG+ TM+DSN FHA CLDT+PPIFYMN+   +SR +I I+H +N FH  +RAAYTFDAGPNAV++   KD A +LALL  ++P   DG         +AS   ++ N            A+    L+     T  +P+ G +K +Y T+ GG  RVL     ++DL +G            +P PS S G
Sbjct:  172 GSDSLAVRVADEHHWPALRAIICVVNDREKDTSSTSGMKTSKETSTLLQHRVASVVDGRLEQIEAAYQARDFATFGELTMRDSNQFHAVCLDTYPPIFYMNE---VSRKIIHIVHRFNTFHGAVRAAYTFDAGPNAVIFLEDKDVAAVLALLQTYFPTTRDGGSLPIQTVSSASELHQWRN------------ASFPADLRAM---TQVSPSPGGIKSLYVTRVGGGTRVLATNESLVDLTTGKPRIPRVEKTKEEPAPSPSRG 417          
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: K3WFN8_GLOUD (Diphosphomevalonate decarboxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFN8_GLOUD)

HSP 1 Score: 196 bits (498), Expect = 1.530e-54
Identity = 115/282 (40.78%), Postives = 162/282 (57.45%), Query Frame = 3
Query:   75 GFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESGDVIDPTPSCSNGTSS*ETR*STRY-RG*HAGAGCPRVT*PHSIG 917
            G  SR ++VADEH+W E+ A I V +  +KDTSST+GM TS  TS LL  +A  V   RLA +E+AYL +DF SFGK TMQDSN FHATCLDT+PPIFY+ND   ISR +I ++HAYNA   +++AAYTFDAGPNAV++   +   E+++LLL+ +P+     ++ +    G+       MK                       P  G +KM Y ++ GG  RVL  +  ++DLE+G+     P  S+ +S  + R    + R  H  A  P +    ++G
Sbjct:  167 GRDSRAVQVADEHYWKELCAIICVVNDKEKDTSSTSGMKTSKDTSALLQFRADHVVDDRLAVMERAYLAKDFVSFGKLTMQDSNQFHATCLDTYPPIFYLND---ISRKIIHLVHAYNAQAGKVQAAYTFDAGPNAVIFLEEQHVQEVMSLLLQCFPSSSPVEIKSSIPVDGKASTLVSSMKLP--------------------APTQGGIKMFYVSRVGGGTRVLGPQEALVDLETGE-----PLLSSSSSRQKERSDCFWARQIHENAWFPYIVGAAAVG 420          
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7S2DKF6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DKF6_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.740e-53
Identity = 113/250 (45.20%), Postives = 152/250 (60.80%), Query Frame = 3
Query:   84 SRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEAD---AALSEGLQEACL-KTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESGDVIDPTPSCSN 821
            SR M+VA +  WP + A I+V +  KKDTSST GM  SV TS LL  +A++V   RL EI+ AYL RDF +FG  TM DSN FHATC DT PPIFYM D   +S++V+ ++H YNA  D IRAAYTFDAGPNAV++   +     LA +LR++P           ++S    N  +++ EA + D   A  S+G + A + ++ R P  G V+MIY T+ G  PRVL     ++DL +G     TP C+N
Sbjct:    8 SRAMQVAPQDTWPSLHALIMVVNDAKKDTSSTNGMIRSVNTSKLLSFRAKEVVDGRLEEIKAAYLSRDFETFGNLTMMDSNQFHATCQDTHPPIFYMTD---VSKAVVQLVHGYNACFDRIRAAYTFDAGPNAVIFVEEEHRQHFLAFMLRYFPF---------VTKS----NKPELLLEARKIDLEAAVTSKGDEVASMSESSRVP--GSVRMIYCTRVGDGPRVLTPADSLMDLRNG-----TP-CAN 233          
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A1W0A6I2_9STRA (Diphosphomevalonate decarboxylase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6I2_9STRA)

HSP 1 Score: 192 bits (488), Expect = 6.170e-52
Identity = 105/238 (44.12%), Postives = 144/238 (60.50%), Query Frame = 3
Query:   75 GFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788
            G  S  ++VAD  HWPE+ A I V +  +KDTSST+GM TS  TS LLG +AR+V   RL  IE AY  +DFA+FGK TM DSN FHATCLDT+PPIFYMN+   +SRS+I ++H YN F   ++AAYTFDAGPNAV++   ++++E+L LLL ++   GD  V  +  ++       D++                  LK    P A  +KMIY+T  G   +VL     +++L +G
Sbjct:  340 GSDSLAVQVADHEHWPELEAIICVVNDKEKDTSSTSGMMTSKDTSELLGFRAREVVDKRLTAIEAAYKAKDFATFGKITMMDSNQFHATCLDTYPPIFYMNE---VSRSIIHMVHKYNDFKGGVKAAYTFDAGPNAVIFVEKQNTSEVLGLLLNYFDQAGDLEVRGDFDKTKAVKPVADLLNS----------------LKIAAAPGA--LKMIYHTTVGEGRKVLPASESLINLATG 556          
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A8K0EJH2_BRALA (MVD protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0EJH2_BRALA)

HSP 1 Score: 188 bits (478), Expect = 7.480e-52
Identity = 106/239 (44.35%), Postives = 147/239 (61.51%), Query Frame = 3
Query:   75 GFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNN-GDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788
            G  S   ++A   HWPE+R  ++V + GKK   ST GM T+V+TS L+  +A  V P R  E+ +A LERDF +FG+ TM+DSN FHATCLDT+PPIFY+N+ S   + +I ++H YN  H +IRAAYTFDAGPNAV+Y L +D  E+LAL   F+PA       +N+ R  ++V    D+ ++   AD   S GL+         P+ G V+ I +TK G  P+VL D  + L  E+G
Sbjct:  183 GSDSIAKQIAPADHWPELRVLVVVVNAGKKAVGSTEGMQTTVKTSALIKYRAEHVVPSRQEEMRQAVLERDFQTFGEITMKDSNQFHATCLDTYPPIFYLNETS---KHIIHLVHRYNQHHGKIRAAYTFDAGPNAVLYLLQEDLPEVLALFHHFFPA-----TTNNSER--QFVRGLPDVQRKELSADLLDSVGLE---------PSPGSVQYIIHTKAGEDPQVLTDPQQALLDENG 402          
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7K9EPJ1_BARMA (MVD1 decarboxylase (Fragment) n=1 Tax=Baryphthengus martii TaxID=176943 RepID=A0A7K9EPJ1_BARMA)

HSP 1 Score: 182 bits (463), Expect = 1.050e-51
Identity = 102/226 (45.13%), Postives = 133/226 (58.85%), Query Frame = 3
Query:   96 EVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRML 773
            +VA E HWPE+R  +LV S  KK   STAGM TSV+TSPLL  +A  V P RL  + +   ERDF +FG+ TMQDSN FHATCLDTFPPIFY+ND   +SRS+I ++H +NA H   + AYTFDAGPNAVV+ LA   AE + ++ R +P   +G                  ++      AAL E L  A +     P  G V+ I +T+ G  P+++ D  R L
Sbjct:   18 QVAPETHWPELRVLVLVVSGEKKQVGSTAGMQTSVETSPLLKHRAEVVVPERLELMMRHIRERDFEAFGRLTMQDSNQFHATCLDTFPPIFYLND---VSRSIIALVHRFNAHHGRTKVAYTFDAGPNAVVFALADTVAEFVEVVRRSFPPAANGDR---------------FVRGLPVGSAALPEELLAAVVTE---PVPGGVRYILHTQPGPGPQLVTDPSRHL 222          
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A485L4T9_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4T9_9STRA)

HSP 1 Score: 186 bits (473), Expect = 3.170e-51
Identity = 107/238 (44.96%), Postives = 145/238 (60.92%), Query Frame = 3
Query:   75 GFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788
            G  S  +++AD+ HWPE+ A I V +  +KDTSST GM TS  TS LL  +AR+V   RLA IE AYL +DF +FGK TM DSN FHATCLDT+PPIFYMN+   ISR++I ++H YN    +I+AAYTFDAGPNAV++   K + E++ALL  F+    D +VE             +I    +       + +  + +KT  TP A  +KM+Y+T  G   RVL     ++DL +G
Sbjct:  178 GTDSLAIQIADDKHWPELEAIICVVNDKEKDTSSTDGMMTSKNTSDLLHFRAREVVDKRLAAIEAAYLAKDFETFGKITMMDSNQFHATCLDTYPPIFYMNE---ISRNIINLVHKYNDAAGKIQAAYTFDAGPNAVIFLEKKHTQEVVALLRHFF----DSAVEPL-----------EIRGPVDTTTLPAVDAVLLSSIKTQPTPGA--LKMLYHTTVGDGRRVLPASESLIDLATG 395          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2RMS8_9STRA4.140e-6252.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B7S422_PHATC1.920e-5548.73Diphosphomevalonate decarboxylase n=2 Tax=Phaeodac... [more]
A0A1Z5KG56_FISSO3.350e-5549.78Diphosphomevalonate decarboxylase n=2 Tax=Fistulif... [more]
A0A8K1CEZ2_PYTOL8.970e-5543.56Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WFN8_GLOUD1.530e-5440.78Diphosphomevalonate decarboxylase n=1 Tax=Globispo... [more]
A0A7S2DKF6_9STRA2.740e-5345.20Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1W0A6I2_9STRA6.170e-5244.12Diphosphomevalonate decarboxylase (Fragment) n=1 T... [more]
A0A8K0EJH2_BRALA7.480e-5244.35MVD protein n=1 Tax=Branchiostoma lanceolatum TaxI... [more]
A0A7K9EPJ1_BARMA1.050e-5145.13MVD1 decarboxylase (Fragment) n=1 Tax=Baryphthengu... [more]
A0A485L4T9_9STRA3.170e-5144.96Diphosphomevalonate decarboxylase n=1 Tax=Aphanomy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1005contigF-serratus_M_contig1005:114916..118841 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.9
Seed ortholog evalue1.6e-95
Seed eggNOG ortholog2880.D7FTH9
Preferred nameMVD
KEGG rclassRC00453
KEGG koko:K01597
KEGG ReactionR01121
KEGG Pathwayko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130
KEGG ModuleM00095
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004163,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006066,GO:0006084,GO:0006139,GO:0006163,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006489,GO:0006490,GO:0006629,GO:0006637,GO:0006644,GO:0006694,GO:0006695,GO:0006696,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008204,GO:0008284,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009889,GO:0009987,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016829,GO:0016830,GO:0016831,GO:0019216,GO:0019218,GO:0019222,GO:0019287,GO:0019538,GO:0019637,GO:0019693,GO:0030544,GO:0031072,GO:0031907,GO:0031974,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034645,GO:0035383,GO:0036211,GO:0042127,GO:0042221,GO:0042493,GO:0042579,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0043603,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045540,GO:0046165,GO:0046465,GO:0046483,GO:0046490,GO:0046890,GO:0046983,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051186,GO:0055086,GO:0062012,GO:0065007,GO:0070013,GO:0070085,GO:0071704,GO:0072521,GO:0080090,GO:0090181,GO:0090407,GO:0097384,GO:0106118,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930
EggNOG free text desc.diphosphomevalonate decarboxylase activity
EggNOG OGsCOG3407@1,KOG2833@2759
EC4.1.1.33
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons7
Model size1278
Cds size807
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928797.7095966-UTR-F-serratus_M_contig1005:114915..1149441622928797.7095966-UTR-F-serratus_M_contig1005:114915..114944Fucus serratus maleUTRF-serratus_M_contig1005 114916..114944 +
1690962576.6158903-UTR-F-serratus_M_contig1005:114915..1149441690962576.6158903-UTR-F-serratus_M_contig1005:114915..114944Fucus serratus maleUTRF-serratus_M_contig1005 114916..114944 +
1622928797.8032947-UTR-F-serratus_M_contig1005:118399..1188411622928797.8032947-UTR-F-serratus_M_contig1005:118399..118841Fucus serratus maleUTRF-serratus_M_contig1005 118400..118841 +
1690962576.6979446-UTR-F-serratus_M_contig1005:118399..1188411690962576.6979446-UTR-F-serratus_M_contig1005:118399..118841Fucus serratus maleUTRF-serratus_M_contig1005 118400..118841 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928797.722417-CDS-F-serratus_M_contig1005:114944..1150131622928797.722417-CDS-F-serratus_M_contig1005:114944..115013Fucus serratus maleCDSF-serratus_M_contig1005 114945..115013 +
1690962576.627278-CDS-F-serratus_M_contig1005:114944..1150131690962576.627278-CDS-F-serratus_M_contig1005:114944..115013Fucus serratus maleCDSF-serratus_M_contig1005 114945..115013 +
1622928797.733012-CDS-F-serratus_M_contig1005:115478..1155631622928797.733012-CDS-F-serratus_M_contig1005:115478..115563Fucus serratus maleCDSF-serratus_M_contig1005 115479..115563 +
1690962576.6363242-CDS-F-serratus_M_contig1005:115478..1155631690962576.6363242-CDS-F-serratus_M_contig1005:115478..115563Fucus serratus maleCDSF-serratus_M_contig1005 115479..115563 +
1622928797.7452376-CDS-F-serratus_M_contig1005:116101..1161541622928797.7452376-CDS-F-serratus_M_contig1005:116101..116154Fucus serratus maleCDSF-serratus_M_contig1005 116102..116154 +
1690962576.645819-CDS-F-serratus_M_contig1005:116101..1161541690962576.645819-CDS-F-serratus_M_contig1005:116101..116154Fucus serratus maleCDSF-serratus_M_contig1005 116102..116154 +
1622928797.758071-CDS-F-serratus_M_contig1005:116661..1168221622928797.758071-CDS-F-serratus_M_contig1005:116661..116822Fucus serratus maleCDSF-serratus_M_contig1005 116662..116822 +
1690962576.6562598-CDS-F-serratus_M_contig1005:116661..1168221690962576.6562598-CDS-F-serratus_M_contig1005:116661..116822Fucus serratus maleCDSF-serratus_M_contig1005 116662..116822 +
1622928797.7674644-CDS-F-serratus_M_contig1005:117177..1173661622928797.7674644-CDS-F-serratus_M_contig1005:117177..117366Fucus serratus maleCDSF-serratus_M_contig1005 117178..117366 +
1690962576.6667318-CDS-F-serratus_M_contig1005:117177..1173661690962576.6667318-CDS-F-serratus_M_contig1005:117177..117366Fucus serratus maleCDSF-serratus_M_contig1005 117178..117366 +
1622928797.7770014-CDS-F-serratus_M_contig1005:117829..1179711622928797.7770014-CDS-F-serratus_M_contig1005:117829..117971Fucus serratus maleCDSF-serratus_M_contig1005 117830..117971 +
1690962576.6771266-CDS-F-serratus_M_contig1005:117829..1179711690962576.6771266-CDS-F-serratus_M_contig1005:117829..117971Fucus serratus maleCDSF-serratus_M_contig1005 117830..117971 +
1622928797.7862437-CDS-F-serratus_M_contig1005:118291..1183991622928797.7862437-CDS-F-serratus_M_contig1005:118291..118399Fucus serratus maleCDSF-serratus_M_contig1005 118292..118399 +
1690962576.6870997-CDS-F-serratus_M_contig1005:118291..1183991690962576.6870997-CDS-F-serratus_M_contig1005:118291..118399Fucus serratus maleCDSF-serratus_M_contig1005 118292..118399 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1005.157.1prot_F-serratus_M_contig1005.157.1Fucus serratus malepolypeptideF-serratus_M_contig1005 114945..118399 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1005.157.1

>prot_F-serratus_M_contig1005.157.1 ID=prot_F-serratus_M_contig1005.157.1|Name=mRNA_F-serratus_M_contig1005.157.1|organism=Fucus serratus male|type=polypeptide|length=269bp
MANIEFPTPRVVISPGFGSRDMEVADEHHWPEMRAFILVASPGKKDTSST
AGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNH
FHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPN
AVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAE
EADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDL
ESGDVIDPTPSCSNGTSS*
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mRNA from alignment at F-serratus_M_contig1005:114916..118841+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1005.157.1 ID=mRNA_F-serratus_M_contig1005.157.1|Name=mRNA_F-serratus_M_contig1005.157.1|organism=Fucus serratus male|type=mRNA|length=3926bp|location=Sequence derived from alignment at F-serratus_M_contig1005:114916..118841+ (Fucus serratus male)
AGGACCTGATCCGATTTGTCGCGCCAGAGATGGCTAACATTGAGTTCCCG ACTCCACGCGTCGTGATATCGCCGGGTTTTGGGTCTCGCGACATGGAGGT GTGTATTTCTGTTCTAATAACTCGTTTTCAGGGGTGTATGCATGTATGTA AAGCTATTTATCTGTTCATGTACATAGTTTCTTGTATCTTATGTAGTATA TATATATCAATGTACTGATATGTGTTAATGCATGAATGTATGTTTATGTA ACTGTCGTTGTAGTCATGCTATCTATATGCTACTCCCATTGGTCCCTCCC ATGAAGGGACGTCTTTTAAGTGTATGTGTGTTTTCTGCACGTTAACCGAT TGGCCACTTACCGCACATCCTATTAACAGTAGCATTTACTGCTTTCCCTC CGTGGAAAAATGATGAAGGCGTTTTCTCTTTTGTCAAAGTTCGCGGCACA CCCTTACCCTATCGTAGGCATATAAACACTTTGGATACTGTATATTAATA GTAGCGTTTCAAGTTGTTACTGTAGGGTTATTCAGATCGAGTTGTGTGTG TGCGTGTGTGCAGGTGGCGGATGAGCACCACTGGCCGGAGATGCGAGCCT TTATCTTGGTGGCCTCCCCTGGAAAGAAAGACACTTCTAGCACCGCGGGT GAGTCATGGTCATGGTCATGCTTTAATGCTATCATGCGATCGAAACGTTT GAAAAGAACGCCTTCCCCCCCGCCGCCCTCCCCCTCCCTCTCGCCGTTTG GTCATGTTGTCAAATCAATCGTCAAAATCGAAACATACGGGCCCACTACG ACATACTGTGCCGGTGTTCATAGCGAGTTTTGGAGATGAGTTTGGGTAAA GAGGCGTTTGTTGATTGGTCTACGGGGTTTACTAAATATACTCAGCATCT GTAACTCTGACTACATTACCGTACTAGTCTAAGCTAGTATCAGTACTTTA TAGTTACACCCACGTACAATCTCTTGGAGCTACAGTACTGTATTCTGTCA TATTAAGTTAATAATACTAGAGTGTCTATTGTACTGATCTTGGTACAAGC AGGAGTACTGTACAGTACTTGTGATAAAAGAGTCGATCTCAATTTGCGAT TTCGGCACAGAACATTAAAATCCCAACCGAAACAAAACAAATTACATTGC ATCGTACTGTAACTTTTGATTCCATTGTCGATACAGGTATGTCTACAAGC GTCCAGACGAGCCCGCTTCTAGGCTTGAAGGCCCGAAAGGTGGGTACTCA CTACAGCATATGTATACCCGGGCGTCAAAATATGACGATTCCAAACTATC CCATCTCATCCCGTCCCGTCCTCGCCACATGTAATGTCGGGTCTGAAACT AACCACATTATCCGTTGTCGCACCTGCGTTGTATCGTCACCTCATCACCT TATCTGTTACTCAATAATAGTATTATGTACAGTATACGTAACTCTTCCGT TAACTGAATTCCATTTTCATCAGGTATTCATAGTACGTGTACTAATGTGC ATGCACTCCACTTGTGTCACTCTATATCCCGAACCGCTCTACGCATACGT CTTGTACCGTGTACCCACTGACTGCACTCTACATGTCACACGATTTCCAT TATTCATCATATCAGTCATCATTCATAATTCTTCACCCTGCAGTTGTAGT TCTAAAGCTACTGTAGGCTACTACAGTATTACAGTACAACCATCAATCAT CGGTTGTAAAATGTTAATCACGTATCTTGTGTGCCCGCTAAAAAAGGTCG CACCACCCCGTCTGGCGGAAATCGAGAAGGCTTACCTCGAGAGAGACTTT GCGTCCTTTGGGAAGAGCACCATGCAGGACAGCAACCATTTCCACGCTAC GTGCCTCGACACCTTCCCGCCCATATTCTACATGAACGACATGAGTTACA TAAGCAGGTGACGTGACGTGACAACGTGACTTTTTTTGGAGGGTATGTAT CCATGTTTTTATTAGGCTGTCTTGTTTGTTATTAAAGGCGCCAGGAGTAG CGTTCGTCGTCATATACCATATCCTAGTAAAAGCGCGCTACCATTAATGC TACCCTCAATACCATAATATGTCGAAGGTTGCCACGCGAAAGCCTAAATA GCTCGTATCAAAGAATGTTATTATACTTGTATTTACTACAGTACTACAGT ACCATACCGCAATGGGGGTCACGCCGTGCTACATTACTTTATACCAGTAT GCTGTAGATATTATTTTTTGTGTTCGTGTCTTACAAAAAATCTATTCATA CTTTATTGCAAGGTCCGTGATCCCGATCATCCACGCCTACAACGCCTTCC ACGATGAGATTCGAGCGGCCTACACCTTCGACGCTGGACCGAACGCGGTG GTGTACCACCTTGCAAAGGATTCCGCCGAGCTCCTGGCGCTTCTGCTGCG GTTCTATCCCGCTCCGGGCGACGGATCAGTCGAAGACAATGCCTCGCGTA GGTGGGTTGAGTACCGGTACCTTTTCCCGTAGTCTCCCGTCCGTCAAGAC TCTTAACGACGTGCAACGGGTGTAAGGTGTAAGTTGCCGTGACTAATAAG TTTGTTTTGGCGTAAATAGCAGGCCTCAGCTCTTTCACGGAAAGGGAGTT TGGCGGCGAGTTATTTCTTTTTAATTTAAAAACACAATAAAACCTTGTAA AAGTCGAAGGATCTTGTGGTCTCCAATAAATTGTTGGAGCGGTGCTCGTT CGAGTTCGCGTGGATGGGTTTTGTCTTAGTTTTAGAAAGGTAATGCCTTG TTGTTGTTGATTGTTTTTCACTTAACGCGCGGGAGGCGGGAGGCGGGGGG CTTTTTATCTCCGCCTTTCTCTTTTGATACGATTCTAATTACCATACCAT AGTATTTATTGCTGGTAACTTGTATTTTTTGGGTTTCGCGCATATCACCA ATCAACGCCGGCAGCGGTGAGTACGTGAACAACGGGGATATAATGAAGGA GGCGGAAGAGGCGGACGCCGCCCTTTCCGAGGGTCTCCAAGAGGCGTGCT TGAAGACGGGGAGGACTCCCGCGGCCGGCGACGTCAAGATGATTTACTAC ACGAAGGTAAAATTTACAGTGCGTCTTGTATTCTTTCTTTGGTACATTCC ACTACGTGTCTCTCATTCGATATCCTTTCTGGGAGTTTGTAGAGGTAGAA AGGGGAAGAACAGTTTAATCATCTGCTGCGATTAACAAGACCAGGAAATA ATCGACTATCAAAACAGTTATTGTTAGTCTTTATTCAAGTATTAGTACTA GTGGTACTTCGGAACATCGTGGTTTACGTGTCGGTACTCTGAAGAACTGT CTCTCCATACCCCCTTTGACCAATCTAATCCTCCGCAATGATACCATCGT TCTACTCTTATCCTACCGTTGGGCAGACCGGTGGCTCTCCTCGAGTGCTG GATGACAAGGGGCGCATGCTGGATCTGGAGAGCGGAGATGTAATCGATCC CACGCCCAGTTGCTCTAATGGTACATCATCATAGGAGACGAGATAGAGCA CACGCTATAGAGGGTAGCACGCAGGCGCTGGCTGTCCCCGAGTGACGTAA CCGCACAGCATAGGATGGTACTGACCTCTTTAATTTATTAATAGGCGTTC GAGATACAAAACATTATGGGACATGATGGGGGTGTTTTACGAGGATACGA TAGAGAGCTGATGGGTTGCATCGGTTTTTGCAGGAATAAGCCAAATATTT CATCGTTCTGTGTATTGTTTTGATGAATACCACGAATGCCGCCAAAAACG GCCAAAATATATTTCCGTTTCTCTGGAGAGTCAGAAAACTGTTTTCGTAC ATTGGCTATAGGCCTTTACCCATAGATTTTTCGGCAGATTTGGCCAAAAA GTGTAGATGCAAAAGCAGATCTTGAAAAGAGCAGATCTCAAGCAGATTCA GGGCCATCATAAACAGGAGGTGTGCT
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Coding sequence (CDS) from alignment at F-serratus_M_contig1005:114916..118841+

>mRNA_F-serratus_M_contig1005.157.1 ID=mRNA_F-serratus_M_contig1005.157.1|Name=mRNA_F-serratus_M_contig1005.157.1|organism=Fucus serratus male|type=CDS|length=1614bp|location=Sequence derived from alignment at F-serratus_M_contig1005:114916..118841+ (Fucus serratus male)
ATGGCTAACATTGAGTTCCCGACTCCACGCGTCGTGATATCGCCGGGTTT
TGGGTCTCGCGACATGGAGATGGCTAACATTGAGTTCCCGACTCCACGCG
TCGTGATATCGCCGGGTTTTGGGTCTCGCGACATGGAGGTGGCGGATGAG
CACCACTGGCCGGAGATGCGAGCCTTTATCTTGGTGGCCTCCCCTGGAAA
GAAAGACACTTCTAGCACCGCGGGTGGCGGATGAGCACCACTGGCCGGAG
ATGCGAGCCTTTATCTTGGTGGCCTCCCCTGGAAAGAAAGACACTTCTAG
CACCGCGGGTATGTCTACAAGCGTCCAGACGAGCCCGCTTCTAGGCTTGA
AGGCCCGAAAGGTATGTCTACAAGCGTCCAGACGAGCCCGCTTCTAGGCT
TGAAGGCCCGAAAGGTCGCACCACCCCGTCTGGCGGAAATCGAGAAGGCT
TACCTCGAGAGAGACTTTGCGTCCTTTGGGAAGAGCACCATGCAGGACAG
CAACCATTTCCACGCTACGTGCCTCGACACCTTCCCGCCCATATTCTACA
TGAACGACATGAGTTACATAAGCAGGTCGCACCACCCCGTCTGGCGGAAA
TCGAGAAGGCTTACCTCGAGAGAGACTTTGCGTCCTTTGGGAAGAGCACC
ATGCAGGACAGCAACCATTTCCACGCTACGTGCCTCGACACCTTCCCGCC
CATATTCTACATGAACGACATGAGTTACATAAGCAGGTCCGTGATCCCGA
TCATCCACGCCTACAACGCCTTCCACGATGAGATTCGAGCGGCCTACACC
TTCGACGCTGGACCGAACGCGGTGGTGTACCACCTTGCAAAGGATTCCGC
CGAGCTCCTGGCGCTTCTGCTGCGGTTCTATCCCGCTCCGGGCGACGGAT
CAGTCGAAGACAATGCCTCGCGTAGGTCCGTGATCCCGATCATCCACGCC
TACAACGCCTTCCACGATGAGATTCGAGCGGCCTACACCTTCGACGCTGG
ACCGAACGCGGTGGTGTACCACCTTGCAAAGGATTCCGCCGAGCTCCTGG
CGCTTCTGCTGCGGTTCTATCCCGCTCCGGGCGACGGATCAGTCGAAGAC
AATGCCTCGCGTAGCGGTGAGTACGTGAACAACGGGGATATAATGAAGGA
GGCGGAAGAGGCGGACGCCGCCCTTTCCGAGGGTCTCCAAGAGGCGTGCT
TGAAGACGGGGAGGACTCCCGCGGCCGGCGACGTCAAGATGATTTACTAC
ACGAAGCGGTGAGTACGTGAACAACGGGGATATAATGAAGGAGGCGGAAG
AGGCGGACGCCGCCCTTTCCGAGGGTCTCCAAGAGGCGTGCTTGAAGACG
GGGAGGACTCCCGCGGCCGGCGACGTCAAGATGATTTACTACACGAAGAC
CGGTGGCTCTCCTCGAGTGCTGGATGACAAGGGGCGCATGCTGGATCTGG
AGAGCGGAGATGTAATCGATCCCACGCCCAGTTGCTCTAATGGTACATCA
TCATAGACCGGTGGCTCTCCTCGAGTGCTGGATGACAAGGGGCGCATGCT
GGATCTGGAGAGCGGAGATGTAATCGATCCCACGCCCAGTTGCTCTAATG
GTACATCATCATAG
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