mRNA_F-serratus_M_contig1003.143.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5JFA7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFA7_9PHAE) HSP 1 Score: 213 bits (541), Expect = 2.040e-64 Identity = 110/172 (63.95%), Postives = 127/172 (73.84%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEG 516 LRPNNGSI++QRP IL LDDFKCH+D+ FIA L + ANTIV IPGGLT LLQPLDRML ++M RL+R K TA +A+A AD +GK+KPP G+VST CKE+WE ITP+ VKTC KI L LALDGSE HAWC HNF E R+LL +Q A H DVT PPL L P G Sbjct: 167 LRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVTFIPGGLTPLLQPLDRMLYRQMMRLLRGKCTAYSASAVADARSGKMKPPERGIVSTWCKEAWESITPETVKTCFKISALTLALDGSEGHAWCEHNFGEDCRDLLEEQHAVWLAEHLDVTLPPLKLLKEPGG 338
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5JTI5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI5_9PHAE) HSP 1 Score: 206 bits (525), Expect = 2.490e-64 Identity = 102/157 (64.97%), Postives = 121/157 (77.07%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHP 471 LRPNNGSI++QRP IL LDDFKCH+ + F+A L + ANT+VI IPGGLT L+QPLDRMLNK+MKRL+ KYTA +A+A D +GKLKPP GVVST CKE+WE I P+ VKTC KI GL LALDG EDHAWC HNF E +R+LL ++ A HP Sbjct: 26 LRPNNGSIVQQRPCILVLDDFKCHKAEGFMAALKRDANTMVIFIPGGLTPLVQPLDRMLNKQMKRLLWGKYTAYSASAVIDARSGKLKPPERGVVSTWCKEAWESINPETVKTCFKICGLTLALDGGEDHAWCQHNFGEDHRDLLEERHAVWLAEHP 182
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE) HSP 1 Score: 207 bits (527), Expect = 2.450e-63 Identity = 104/148 (70.27%), Postives = 118/148 (79.73%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQ 444 LRPNNGSI++QRP IL LDDFK H+D+ FIA L + ANTIVI IPGGLT LLQPLD MLNK+MKRL+R KY A +A+A AD +GKLKPP GVVST CKE+WE ITP+ VKTC KI GL LALDGSEDHAWC HN E YR+L +Q Sbjct: 123 LRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDCMLNKQMKRLLRGKYIAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNVGEDYRDLFEEQ 270
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5KVR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR1_9PHAE) HSP 1 Score: 216 bits (551), Expect = 3.330e-63 Identity = 122/207 (58.94%), Postives = 139/207 (67.15%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSE 621 LRPNNGSI CH+D FIA L + A+TIVI IPGGLT LLQPLDRMLNK+ RL+R YTA TA A DP TGKL PPG G V+T CK +W ITP+ VKTC KI GL LALDGSEDHAWC+HNF +GYRELL QQRVE A HP+VT PPL LP VP + N I A KE++ LLP G D D+E+ + Sbjct: 429 LRPNNGSI--------------CHKDDGFIAALKREASTIVIFIPGGLTPLLQPLDRMLNKQ--RLLRGMYTAHTAKAVRDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAEST-ANHIEAAAKELEEWLLPRG----DDSDIEIED 614
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5L467_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L467_9PHAE) HSP 1 Score: 201 bits (511), Expect = 3.300e-62 Identity = 99/136 (72.79%), Postives = 110/136 (80.88%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHN 408 LRPNNGSI++QRP IL LDDFKCH+D++FIA L ANTIVI IPGGL LLQPLDRMLNK+MKRL+R KYTA +A+A AD +GK KPP GVVST CKE WE ITP+ VKTC KI G LALDGSEDHAWC HN Sbjct: 26 LRPNNGSIVQQRPCILVLDDFKCHKDESFIAALKNDANTIVIFIPGGLAPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKQKPPERGVVSTWCKEEWESITPETVKTCFKICGRTLALDGSEDHAWCEHN 161 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1003.143.1 >prot_F-serratus_M_contig1003.143.1 ID=prot_F-serratus_M_contig1003.143.1|Name=mRNA_F-serratus_M_contig1003.143.1|organism=Fucus serratus male|type=polypeptide|length=89bp MLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITback to top mRNA from alignment at F-serratus_M_contig1003:169093..169773- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1003.143.1 ID=mRNA_F-serratus_M_contig1003.143.1|Name=mRNA_F-serratus_M_contig1003.143.1|organism=Fucus serratus male|type=mRNA|length=681bp|location=Sequence derived from alignment at F-serratus_M_contig1003:169093..169773- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1003:169093..169773- >mRNA_F-serratus_M_contig1003.143.1 ID=mRNA_F-serratus_M_contig1003.143.1|Name=mRNA_F-serratus_M_contig1003.143.1|organism=Fucus serratus male|type=CDS|length=534bp|location=Sequence derived from alignment at F-serratus_M_contig1003:169093..169773- (Fucus serratus male)back to top |