mRNA_F-serratus_M_contig1003.143.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 253 bits (645), Expect = 9.150e-77 Identity = 140/226 (61.95%), Postives = 161/226 (71.24%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKGD 678 LRPNNGSI++QRP IL LDDFKCH+D+ FIA L + A T VI IPGGLTSLLQPLDRMLNK+MKRL+R KYTA +A+A AD +GKL PP +GVVST CKE+WE IT V+TC KI GL LALDGSE HAWC HNF E Y +LL +Q A HPD T PPL LP VP G +NPIT A KEV+ KLLP ESD +VE+ E GGGGA+G+ Sbjct: 437 LRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHHAWCEHNFGEDYGDLLEEQHAVWLAEHPDDTLPPLKLPKVP-GGFDSNPITAAQKEVEGKLLPY-VADESDSEVEVLEGXXXXXXXXXQGGGGAEGE 659
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5JJG0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG0_9PHAE) HSP 1 Score: 231 bits (590), Expect = 8.830e-74 Identity = 128/209 (61.24%), Postives = 152/209 (72.73%), Query Frame = 1 Query: 67 CHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHA-----WCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKGD 678 CH+D+ +IA L + ANTIVI IPGGLT LLQPLDRMLNK+MKRL+R KYTA +A+A AD +GKLKPP GVVST C E+WE ITP+ VKTC KI GL LALDGSEDHA WC H+F E YR+LL +Q A HPDVT PPL LP VP G ++PIT A KEV+ KLLP ESD +VE+ E DS+V ++ GGGGA+G+ Sbjct: 2 CHKDEGYIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPECGVVSTWCTEAWEFITPETVKTCFKICGLTLALDGSEDHACEDHAWCEHHFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVP-GGFDSSPITAAQKEVEGKLLPY-VADESDSEVEVLEGDSDVGVVKGQGGGGAEGE 208
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 234 bits (596), Expect = 9.110e-72 Identity = 119/170 (70.00%), Postives = 135/170 (79.41%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVP 510 LRPNNGSI++QRP IL LDDFKCH+D+ FIA L + ANTIVI IPGGLT LLQPLDRMLNK+ KRL+R+KYTA +A+AT D +GKLKPP GVVST CK +WE ITP+ VKTC KI GL LALDGSEDHAWC HNF E YR+LL +Q A HP+VT PPL LP VP Sbjct: 176 LRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASAT-DARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVP 344
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE) HSP 1 Score: 237 bits (604), Expect = 2.140e-71 Identity = 126/207 (60.87%), Postives = 145/207 (70.05%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSE 621 LRPNNGSI++QR IL LDDFKCH+D FIA L + ANTIVI IPGGLT LLQ LDRMLNK+MKRL+ P TGKL PPG G V+T CK +W ITP+ VKTC KI GL LALDGSEDHAWC+HNF +GYRELL QQRVE A HP+VT PPL LP VP + N I A KE++A+LLP G D D+E+ + Sbjct: 367 LRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAEST-ANHIEAAAKELEAELLPRG----DDSDIEIED 568
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE) HSP 1 Score: 243 bits (621), Expect = 7.560e-71 Identity = 145/274 (52.92%), Postives = 165/274 (60.22%), Query Frame = 1 Query: 4 RPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMR------------------------------------------------TKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKGDE 681 RPN+GS+IKQR SIL LDDF+CHR ++F+ DL +R NT VILIPGGLT LLQPLDRMLNK MKRLMR T A+A ADP TGKL+PPG G+VST KESW ITP+ VK C K+ GL LALDGSED AW HNF EGYRE+L QQ E EA HP VT PPL LP V A NPI TA+KEV AKLLP +SD +VE+ + DS+VELLD P G A GD+ Sbjct: 312 RPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADPKTGKLQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSEDDAWGTHNFGEGYREVLVQQHAEWEAQHPGVTLPPLQLPEV-SSAPGANPIATAEKEVTAKLLPPE--GDSDDEVEIIDGDSDVELLDGPWVGAAGGDD 582
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 234 bits (597), Expect = 4.060e-70 Identity = 134/225 (59.56%), Postives = 152/225 (67.56%), Query Frame = 1 Query: 4 RPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKGD 678 RPNNGSI++QRP IL LDDFKCH+D+ FIA L + ANTIVI IPGGLT LLQPLDRMLNK+MKRL+R KYTA +A A AD +GKLKPP GVVST CKE+WE +T + V TC KI GL LALDGSEDHA C E HPDVT PPL LP VPEG +NPIT A KEV+ KLLP ESD +VE+ E GGGGA+G+ Sbjct: 405 RPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDHA-CTPCIAE----------------HPDVTLPPLKLPKVPEG-FDSNPITAAQKEVEGKLLPY-VADESDSEVEVLEGXXXXXXXXXQGGGGAEGE 610
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5K3D3_9PHAE (C3H1-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D3_9PHAE) HSP 1 Score: 232 bits (591), Expect = 1.660e-67 Identity = 119/168 (70.83%), Postives = 131/168 (77.98%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRT-KYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLP 501 LRPNNGSI++QR IL LDDFKCH+D FIA L + ANTIVI IPGGLT LLQPLDRMLNK+MKRL+R YTA TA A DP TGKL P G G V+T CK +W ITP+ VKTC KI GL LALDGSEDHAWC+HNF +GYRELL QQRVE A HP+VT PPL LP Sbjct: 89 LRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRRGMYTAHTAKAARDPKTGKLVPLGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLP 256
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE) HSP 1 Score: 224 bits (571), Expect = 2.000e-66 Identity = 123/191 (64.40%), Postives = 134/191 (70.16%), Query Frame = 1 Query: 4 RPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLP 576 RPN+GS+IKQR SIL LDDF R NT VILIPGGLT LLQPLDRML+K MKRLMR +YT A+A ADP TGKL+PPG G+VST CKESW IT + VK C K+ GL LALDGSED AWC HNF EGYRE+L QQR E A P VT PPL LP V A NPI TA+KEV AKLLP Sbjct: 416 RPNHGSVIKQRHSILVLDDF--------------RTNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDAWCTHNFGEGYREVLVQQRAEWGAQRPGVTLPPLQLPEV-SSASGANPIATAEKEVTAKLLP 591
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5K0T0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T0_9PHAE) HSP 1 Score: 211 bits (536), Expect = 1.240e-65 Identity = 121/201 (60.20%), Postives = 135/201 (67.16%), Query Frame = 1 Query: 73 RDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKG 675 +D+ FIA L + ANT VI IPGGLT LLQ LDRMLNK+MKRL+R KYTA +A+A AD +GKLKPP GVVST CKE+WE ITP VKTC KI GL LALDG EDHAWC HNF E R+LL +Q A HPDVT PPL LP VP G NPIT A KEV+ KLLP ESD +VE+ E GGA G Sbjct: 6 KDEGFIAALKRDANTTVIFIPGGLTPLLQALDRMLNKQMKRLLRGKYTAYSASAVADALSGKLKPPERGVVSTWCKEAWESITPKTVKTCFKICGLTLALDGREDHAWCEHNFGENCRDLLDEQHAVWLAEHPDVTLPPLKLPKVP-GGFDFNPITDAQKEVEGKLLPY-VADESDSEVEVLEGXXXXXXXXGQWDGGADG 204
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5KKC9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKC9_9PHAE) HSP 1 Score: 219 bits (559), Expect = 1.910e-65 Identity = 127/226 (56.19%), Postives = 146/226 (64.60%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKGD 678 LRPNNGSI++QRP IL LDDFKCH+D+ FIA L + ANTIVI PGGLT LLQPLDR LNK+MKRL+R GN S ITP+ VKTC KI GL LALDGSEDHAWC HNF E YR+LL +Q A HPDVT PPL LP VP G +NPIT A KEV+ KLLP ES +VE+ E DS+VE++ GGGGA+G+ Sbjct: 307 LRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFTPGGLTPLLQPLDRTLNKQMKRLLR----------------------GNVGSSLRGGRKRGSITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPRG-FDSNPITAAQKEVEGKLLPY-VADESGSEVEVLEGDSDVEVVKGQGGGGAEGE 508 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1003.143.1 >prot_F-serratus_M_contig1003.143.1 ID=prot_F-serratus_M_contig1003.143.1|Name=mRNA_F-serratus_M_contig1003.143.1|organism=Fucus serratus male|type=polypeptide|length=89bp MLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITback to top mRNA from alignment at F-serratus_M_contig1003:169093..169773- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1003.143.1 ID=mRNA_F-serratus_M_contig1003.143.1|Name=mRNA_F-serratus_M_contig1003.143.1|organism=Fucus serratus male|type=mRNA|length=681bp|location=Sequence derived from alignment at F-serratus_M_contig1003:169093..169773- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1003:169093..169773- >mRNA_F-serratus_M_contig1003.143.1 ID=mRNA_F-serratus_M_contig1003.143.1|Name=mRNA_F-serratus_M_contig1003.143.1|organism=Fucus serratus male|type=CDS|length=534bp|location=Sequence derived from alignment at F-serratus_M_contig1003:169093..169773- (Fucus serratus male)back to top |