mRNA_F-serratus_M_contig1003.143.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1003.143.1
Unique NamemRNA_F-serratus_M_contig1003.143.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5JBJ7_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ7_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 3.020e-86
Identity = 144/226 (63.72%), Postives = 164/226 (72.57%), Query Frame = 1
Query:    1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKGD 678
            LRPNNGSII+QR  IL LDDFKCH+ + FIA L + ANTIVI IPGG T LLQPLDRMLNK+MKRL+R KYTA +A+A AD  +GKLKPP  GVVST CK++WE ITP+ VKTC KI GL LALDGSEDHAWC HNF E YR+LL +Q     A HPDVT PPL LP VP G   +NPIT A KEV+ KLLP     ESD +VE+SE           GGG A+G+
Sbjct:   26 LRPNNGSIIQQRLCILVLDDFKCHKGEGFIAPLKRDANTIVIFIPGGWTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKKAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVP-GGFDSNPITAAQKEVEGKLLPY-VADESDSEVEVSEXXXXXXXXXXQGGGDAEGE 249          
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5L8W0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W0_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 5.310e-84
Identity = 139/225 (61.78%), Postives = 165/225 (73.33%), Query Frame = 1
Query:    4 RPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKGD 678
            RPNNGSI++QRP IL LDDFKC +D+ FIA L + ANTI I IPGGLT LLQPLDR+LNK+MKR++R KYTA +A+A AD  +GKLKPP  GVVST C E+WE I P+ VKTC KI GL LALDG EDHAW  HNF E YR+LL +Q     A HPD T PPL LP VP G    NPIT A KEV+ KL+P     ES  +VE+ E DS+VE+++  GGGGA+G+
Sbjct:   27 RPNNGSIVQQRPCILVLDDFKCRKDEGFIAALKRDANTIAIFIPGGLTPLLQPLDRVLNKQMKRMLRGKYTAYSASAVADARSGKLKPPERGVVSTWCTEAWESIIPETVKTCFKICGLTLALDGREDHAWREHNFGEDYRDLLEEQHAVWLAEHPDATLPPLKLPEVP-GGFDFNPITGAQKEVEEKLMPY-VADESASEVEVLEGDSDVEVVEGQGGGGAEGE 249          
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 5.340e-84
Identity = 144/226 (63.72%), Postives = 164/226 (72.57%), Query Frame = 1
Query:    1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKGD 678
            LRPNNGSI++QRP IL LDDFKCH+D+ FIA L + ANTIVI IPG LT LLQPLDRMLNK+MKRL+R KYTA +A+A AD  +GKLKPP  GVVST CKE+WE  TP+ VKTC  I GL LALDGSEDHAWC HNF E YR+LL +QR    A H DVT PPL LP VP G   +NPIT A KEV+ KLLP     ESD +VE+ E           GGGGA+G+
Sbjct:  242 LRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVP-GGFDSNPITAAQKEVEGKLLPY-VADESDSEVEVLEGXXXXXXXXXQGGGGAEGE 465          
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 3.990e-82
Identity = 142/225 (63.11%), Postives = 163/225 (72.44%), Query Frame = 1
Query:    4 RPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKGD 678
            RPNNGSI++QRP IL LDDF+CH+D+ FIA L +  NTIVI IPGGLT L  PLDRMLNK+MKRL+R KYTA +A+A AD  +GKLKPP  GVVST CKE+WE ITP+ VKTC KI GL LALDGSEDHAWC HNF E YR+LL +Q     A HPDVT PPL LP VP G   +NPIT A KEV+ KLLP     ESD +VE+ E           GGGGA+G+
Sbjct:  417 RPNNGSIVQQRPCILVLDDFRCHKDEGFIAALNRDPNTIVIFIPGGLTPLFHPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVP-GGFDSNPITAAQKEVEGKLLPY-VADESDSEVEVLEGXXXXXXXXXQGGGGAEGE 639          
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 1.420e-81
Identity = 139/225 (61.78%), Postives = 161/225 (71.56%), Query Frame = 1
Query:    1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKG 675
            LRPNNGSI++QRP IL LDD KCH+ + FIA L + ANT+VI IPGGLT LLQPLDRMLNK+MKRL+R KYTA + +A AD  +GKLKPP  GVVST CKE+WE ITP+ VK+C KI GL LALDGSEDHAWC H+F E   +LL +Q     A HPDVT PPL LP VP G   +NPIT A KEV+ KLLP     ESD +VE+ E           GGGGA+G
Sbjct:  123 LRPNNGSIVQQRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKSCFKICGLTLALDGSEDHAWCDHDFGEDSHDLLEEQHAVWLAEHPDVTLPPLKLPKVP-GGFDSNPITAAQKEVEGKLLPY-VADESDSEVEVLEGXXXXXXXXXQGGGGAEG 345          
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 1.930e-79
Identity = 129/193 (66.84%), Postives = 149/193 (77.20%), Query Frame = 1
Query:    1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPS 579
            LRPNNGSI++QRP IL LDDFKCH+D+ FIA L + ANTIVI IPGGLT LLQPLD  LNK+MKRL+R K+TA +++A AD  +GKLKPP  G+VST CKE WE ITP+ VKTC KI GL LALDGSEDHAWC HNF E YR+LL +Q     A HP+VT PPL LP VP G   +NPIT A KEV+ KLLP+
Sbjct:   87 LRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLD--LNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVP-GGFDSNPITAAQKEVEGKLLPT 276          
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 3.110e-79
Identity = 134/207 (64.73%), Postives = 153/207 (73.91%), Query Frame = 1
Query:    1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSE 621
            LRPNNGS+++QR  IL LDDFKCH+D  FIA L + ANTIVI IPGGLT LLQPLDRMLNK+MKRL+R  YTA TA A  DP TGKL PPG G V+T CK +W  ITP+ VKTC KI GL LALDGSEDHAWC+HNF +GYRELL QQRVE  A HP+VT PPL LP VP  +   N I  A KE++A LLP G     D D+E+ +
Sbjct:  355 LRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAEST-ANHIEAAAKELEAGLLPRG----DDSDIEIED 556          
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 1.020e-78
Identity = 134/207 (64.73%), Postives = 152/207 (73.43%), Query Frame = 1
Query:    1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSE 621
            LRPNNGSI++QR  IL LDDFKCH+D  FIA L + ANTIVI IPGGLT LLQPLDRMLNK+MKRL+R  YTA TA A  DP TGKL PPG G V+T CK +W  ITP+  KTC KI GL LALDGSEDHAWC+HNF +GYRELL QQRVE  A HP+VT PPL LP VP  +   N I  A KE++A LLP G     D D+E+ +
Sbjct:  362 LRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAEST-ANHIEAAAKELEAGLLPRG----DDSDIEIED 563          
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5L4U1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U1_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 3.250e-78
Identity = 125/184 (67.93%), Postives = 142/184 (77.17%), Query Frame = 1
Query:    1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADK 552
            LRPNNGSI++QRP IL LDDFKCH+D+ FIA L + ANTI+I IPGG+T LLQPLDR+LNK+MKRL+R KYTA +A+A AD  +GKLKPP  GVVST CKE+WE ITP+ VKTC  I  L LALDGSEDHAWC HNF E YR+LL +Q   R A HPDVT PPL LP VP G    NPIT A K
Sbjct:  103 LRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIIIFIPGGMTLLLQPLDRLLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFMICRLTLALDGSEDHAWCEHNFGEDYRDLLGEQHAVRLAEHPDVTLPPLKLPKVP-GRFDPNPITAAQK 285          
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 2.210e-77
Identity = 134/207 (64.73%), Postives = 151/207 (72.95%), Query Frame = 1
Query:    1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSE 621
            LRPNNGSI++QR  IL LDDFKCH+D  FIA L K ANTIVI IPGGLT LLQPLDRMLNK+MKRL+R  YTA TA A  DP TG L PPG G V+T CK +W  ITP+ VKTC KI GL LALDGSEDHAWC+HNF +GYRELL QQRVE  A HP+VT P L LP VP  +   N I  A KE++A LLP G     D D+E+ +
Sbjct:  392 LRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPTLQLPKVPAEST-ANHIEAAAKELEAGLLPCG----DDSDIEIED 593          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBJ7_9PHAE3.020e-8663.72DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5L8W0_9PHAE5.310e-8461.78DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE5.340e-8463.72DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JN68_9PHAE3.990e-8263.11DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KQK9_9PHAE1.420e-8161.78DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5J8R4_9PHAE1.930e-7966.84DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE3.110e-7964.73DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ1_9PHAE1.020e-7864.73DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L4U1_9PHAE3.250e-7867.93DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KYG9_9PHAE2.210e-7764.73DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1003contigF-serratus_M_contig1003:169093..169773 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons1
Model size681
Cds size267
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1003.143.1prot_F-serratus_M_contig1003.143.1Fucus serratus malepolypeptideF-serratus_M_contig1003 169336..169602 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928795.2082918-UTR-F-serratus_M_contig1003:169092..1693351622928795.2082918-UTR-F-serratus_M_contig1003:169092..169335Fucus serratus maleUTRF-serratus_M_contig1003 169093..169335 -
1690962575.4222589-UTR-F-serratus_M_contig1003:169092..1693351690962575.4222589-UTR-F-serratus_M_contig1003:169092..169335Fucus serratus maleUTRF-serratus_M_contig1003 169093..169335 -
1622928795.2440405-UTR-F-serratus_M_contig1003:169602..1697731622928795.2440405-UTR-F-serratus_M_contig1003:169602..169773Fucus serratus maleUTRF-serratus_M_contig1003 169603..169773 -
1690962575.4388998-UTR-F-serratus_M_contig1003:169602..1697731690962575.4388998-UTR-F-serratus_M_contig1003:169602..169773Fucus serratus maleUTRF-serratus_M_contig1003 169603..169773 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928795.2304866-CDS-F-serratus_M_contig1003:169335..1696021622928795.2304866-CDS-F-serratus_M_contig1003:169335..169602Fucus serratus maleCDSF-serratus_M_contig1003 169336..169602 -
1690962575.4308958-CDS-F-serratus_M_contig1003:169335..1696021690962575.4308958-CDS-F-serratus_M_contig1003:169335..169602Fucus serratus maleCDSF-serratus_M_contig1003 169336..169602 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1003.143.1

>prot_F-serratus_M_contig1003.143.1 ID=prot_F-serratus_M_contig1003.143.1|Name=mRNA_F-serratus_M_contig1003.143.1|organism=Fucus serratus male|type=polypeptide|length=89bp
MLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIIT
PDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*
back to top

mRNA from alignment at F-serratus_M_contig1003:169093..169773-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1003.143.1 ID=mRNA_F-serratus_M_contig1003.143.1|Name=mRNA_F-serratus_M_contig1003.143.1|organism=Fucus serratus male|type=mRNA|length=681bp|location=Sequence derived from alignment at F-serratus_M_contig1003:169093..169773- (Fucus serratus male)
CTCCGCCCAAACAATGGAAGCATCATCAAGCAGCGCCCAAGCATCTTGGC GTTGGACGACTTCAAGTGCCACCGAGACAAAGCTTTCATCGCTGACCTCT TGAAGAGGGCGAACACCATCGTTATCCTGATCCCAGGCGGGTTAACTTCT CTCCTCCAGCCGCTGGACCGCATGCTCAACAAGCGGATGAAGCGGCTGAT GCGGACGAAGTACACCGCCCTTACCGCAACAGCAACGGCAGATCCCACGA CGGGCAAGCTGAAGCCGCCGGGGAATGGGGTCGTGTCTACGGGGTGCAAG GAGTCGTGGGAAATCATCACCCCCGACGTGGTCAAGACTTGCCTCAAGAT CTGGGGCCTCCCGCTTGCCCTCGATGGCAGCGAGGACCACGCCTGGTGCG TGCACAACTTCTGTGAAGGTTACCGCGAGCTTCTCTAGCAGCAGCGCGTC GAGCGGGAGGCAGCACACCCCGATGTAACTCATCCCCCGCTCTACCTGCC AGCGGTGCCCGAGGGCGCCATCATTACCAACCCCATCACGACCGCAGATA AGGAGGTAGATGCGAAACTGCTGCCCTCCGGCACTGGTTGGGAAAGCGAT CGCGATGTAGAGCTCTCGGAAGACGACAGTAATGTAGAGCTCTTGGACGC TCCGGGAGGTGGGGGCGCAAAAGGCGACGAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1003:169093..169773-

>mRNA_F-serratus_M_contig1003.143.1 ID=mRNA_F-serratus_M_contig1003.143.1|Name=mRNA_F-serratus_M_contig1003.143.1|organism=Fucus serratus male|type=CDS|length=534bp|location=Sequence derived from alignment at F-serratus_M_contig1003:169093..169773- (Fucus serratus male)
ATGCTCAACAAGCGGATGAAGCGGCTGATGCGGACGAAGTACACCGCCCT
TACCGCAACAGCAACGGCAGATCCCACGACGGGCAAGCTGAAGCCGCCGG
GGAATGGGGTCGTGTCTACGGGGTGCAAGGAGTCGTGGGAAATCATCACC
CCCGACGTGGTCAAGACTTGCCTCAAGATCTGGGGCCTCCCGCTTGCCCT
CGATGGCAGCGAGGACCACGCCTGGTGCGTGCACAACTTCTGTGAAGGTT
ACCGCGAGCTTCTCTAGATGCTCAACAAGCGGATGAAGCGGCTGATGCGG
ACGAAGTACACCGCCCTTACCGCAACAGCAACGGCAGATCCCACGACGGG
CAAGCTGAAGCCGCCGGGGAATGGGGTCGTGTCTACGGGGTGCAAGGAGT
CGTGGGAAATCATCACCCCCGACGTGGTCAAGACTTGCCTCAAGATCTGG
GGCCTCCCGCTTGCCCTCGATGGCAGCGAGGACCACGCCTGGTGCGTGCA
CAACTTCTGTGAAGGTTACCGCGAGCTTCTCTAG
back to top