mRNA_F-serratus_M_contig1001.124.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: A0A8J4B2W9_9CHLO (DUF667 domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B2W9_9CHLO) HSP 1 Score: 111 bits (277), Expect = 1.320e-25 Identity = 62/146 (42.47%), Postives = 85/146 (58.22%), Query Frame = 2 Query: 5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGK---CGRLYDKGVRGYVLAVSGGAKSKMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVALA 433 MF + YQ G VEV G P+A WK++G ++YDK ++GYV SG + M PK ++TLGL Q HL+LQ+ PFSVE+GL+D RRR++LSS+F + CTPLH Q+P L R W N+ + + LA Sbjct: 1 MFANEYQGGSHVEVLGTQGQNPLAQWKVSGPQKGVQKVYDKALKGYVFVSSGACR--MVLPKDDRSTLGLVQPHLLLQLEVGVGT--PFSVEVGLSDASATRRRVILSSSFSELKCTPLHCQVPFTCLP--RESWLNLVLPIAELA 140
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: A0A2K3DRK1_CHLRE (DUF667 domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DRK1_CHLRE) HSP 1 Score: 111 bits (277), Expect = 1.330e-25 Identity = 62/146 (42.47%), Postives = 88/146 (60.27%), Query Frame = 2 Query: 5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGK---CGRLYDKGVRGYVLAVSGGAKSKMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVALA 433 MF + YQ G VEV G P++ WK++G ++YDK ++GYV A GA KM P+ +++LGL Q HL+LQ+ PFSVE+G+TD+ G RRR++LSS+F + TPLH Q+PL + R W N+ + L LA Sbjct: 1 MFSNEYQGGTHVEVLGTQGQNPLSAWKVSGPQKGVQKVYDKALKGYVFAC--GAGCKMALPRDDRSSLGLSQPHLLLQLEIGLGG--PFSVEVGVTDSSGTRRRMILSSSFSELKSTPLHCQVPLSSVP--RDAWLNLVLPLADLA 140
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: UPI0003F0A897 (uncharacterized protein C3orf67 homolog n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F0A897) HSP 1 Score: 110 bits (274), Expect = 3.060e-25 Identity = 65/145 (44.83%), Postives = 88/145 (60.69%), Query Frame = 2 Query: 5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCGRL---YDKGVRGYVLAVSGGAKS-KMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVA 427 MF++ YQ G VE+FS G P A WK+ G + +DK VR +V + G +++ K+Q PK K LGL QR LVLQ+ +D FS EL +TD G I+RRL LS+ ++ + TPLHA+IPL +R W N+ IDLVA Sbjct: 1 MFKNEYQGGAFVEIFSAQGKNPGAKWKILGSPSVIWKEFDKEVRSFVFVLEGSSQTNKIQLPKESKQILGLIQRFLVLQIYIPLGQD--FSTELLITDLGNIKRRLYLSTVYKELSSTPLHAKIPL--FMIKRKIWCNLCIDLVA 141
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: UPI001176E1EA (uncharacterized protein C3orf67 homolog n=1 Tax=Salarias fasciatus TaxID=181472 RepID=UPI001176E1EA) HSP 1 Score: 110 bits (274), Expect = 3.140e-25 Identity = 66/146 (45.21%), Postives = 92/146 (63.01%), Query Frame = 2 Query: 5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCGRL---YDKGVRGYVLAVSGGAKS-KMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVAL 430 MF++ YQ G VE+FS G P+A WKL G + Y+K V+G+V + G +++ KMQ P+ K +LGL QR LVLQV D FS EL +TD+ ++RRL LS+ + + TPLHA+IPL GL+ R W+ + IDLV+L Sbjct: 1 MFRNNYQGGAVVEIFSGQGKDPVAKWKLYGGPSAIHKEYNKEVKGFVYCLDGSSQTVKMQMPENAKMSLGLLQRFLVLQVNIPQCSD--FSTELLVTDSEHLKRRLHLSTLHKELSATPLHARIPLFGLK--RNIWSTLCIDLVSL 142
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: F7ET30_XENTR (CFAP20 domain containing n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=F7ET30_XENTR) HSP 1 Score: 110 bits (274), Expect = 3.170e-25 Identity = 61/145 (42.07%), Postives = 90/145 (62.07%), Query Frame = 2 Query: 5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCGRL---YDKGVRGYVLAVSGGAKS-KMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVA 427 MF++ YQ G VE+FS G P A WKL+G+ + +DK V+ +V + G +++ KMQ PK + LGL QR L+LQ+ +D FS EL ++D I+RRL LS+ + + TPLHA+IPL GL+ + W N+ +DLV+ Sbjct: 1 MFKNEYQGGAFVEIFSAQGKDPTAKWKLSGRQSAIWKDFDKEVKSFVFVLEGSSQTNKMQLPKESRHNLGLIQRFLLLQLYVPLGQD--FSAELLISDLSNIKRRLYLSTVHKELSSTPLHAKIPLLGLKRKM--WCNLCVDLVS 141 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1001.124.1 >prot_F-serratus_M_contig1001.124.1 ID=prot_F-serratus_M_contig1001.124.1|Name=mRNA_F-serratus_M_contig1001.124.1|organism=Fucus serratus male|type=polypeptide|length=143bp MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCGRLYDKGVRGYVLAVSGGback to top mRNA from alignment at F-serratus_M_contig1001:97749..100723+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1001.124.1 ID=mRNA_F-serratus_M_contig1001.124.1|Name=mRNA_F-serratus_M_contig1001.124.1|organism=Fucus serratus male|type=mRNA|length=2975bp|location=Sequence derived from alignment at F-serratus_M_contig1001:97749..100723+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1001:97749..100723+ >mRNA_F-serratus_M_contig1001.124.1 ID=mRNA_F-serratus_M_contig1001.124.1|Name=mRNA_F-serratus_M_contig1001.124.1|organism=Fucus serratus male|type=CDS|length=858bp|location=Sequence derived from alignment at F-serratus_M_contig1001:97749..100723+ (Fucus serratus male)back to top |