mRNA_F-serratus_M_contig1001.124.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1001.124.1
Unique NamemRNA_F-serratus_M_contig1001.124.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: UPI0011762F37 (uncharacterized protein C3orf67 homolog n=1 Tax=Myripristis murdjan TaxID=586833 RepID=UPI0011762F37)

HSP 1 Score: 113 bits (282), Expect = 2.670e-26
Identity = 68/145 (46.90%), Postives = 91/145 (62.76%), Query Frame = 2 
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCGRL---YDKGVRGYVLAVSGGAKS-KMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVA 427
            MF+  YQ G  VE+FS  G  P+A WKL G    +   Y K VRG V  + G +++ KMQ P+  K +LGL QR LVLQV     +D  FS+EL +TD G ++RRL LS+  + +  TPLHA+IPL GL+  R  W+N+ IDLV+
Sbjct:    1 MFKHNYQGGAVVEIFSAQGKDPVAKWKLNGGPSTIRKEYHKEVRGSVYCLEGCSQTVKMQMPEDGKMSLGLLQRFLVLQVNIPQCKD--FSIELVVTDIGHLKRRLYLSTVHKDLSITPLHARIPLVGLK--RNIWSNLCIDLVS 141
[Close]
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: A0A150FX86_GONPE (DUF667 domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FX86_GONPE)

HSP 1 Score: 112 bits (281), Expect = 3.710e-26
Identity = 62/146 (42.47%), Postives = 85/146 (58.22%), Query Frame = 2 
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGK---CGRLYDKGVRGYVLAVSGGAKSKMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVALA 433
            MF + YQ G  VEV    G  P+A WK++G      ++YDK ++GYV   SGG +  +  P+  +A LGL Q HL+LQ+        PFS+ELGLTD GG RRR++LSS+F  +  TPLH Q+P   +      W N+ + L  LA
Sbjct:    1 MFAAEYQGGTHVEVLGTQGQNPLAQWKVSGPQKGIQKVYDKALKGYVFVASGGCR--LALPRDERAALGLTQPHLLLQLEVGVGV--PFSLELGLTDAGGTRRRVILSSSFSELKSTPLHCQVPFAAVPREL--WLNLVLPLADLA 140
[Close]
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: UPI000BBDD90D (uncharacterized protein C3orf67 homolog isoform X3 n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=UPI000BBDD90D)

HSP 1 Score: 111 bits (278), Expect = 4.500e-26
Identity = 63/143 (44.06%), Postives = 89/143 (62.24%), Query Frame = 2 
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTG---KCGRLYDKGVRGYVLAVSGGAKS-KMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDL 421
            MF++ YQ G  VE+FS  G  P+A WK++G      ++ DK V+G+V ++ G +++ +MQ PK  K  L L QR+LVLQV     +D  FS EL +TD G ++RRL  S+  +    TPLHA++PL GLR  R  W N+ IDL
Sbjct:    1 MFRNEYQGGAIVEIFSAQGKDPVAKWKVSGGLSSISKVLDKEVKGFVYSLEGSSQTHRMQLPKDGKMPLVLIQRYLVLQVNVPLGKD--FSTELVVTDQGHLKRRLYFSTVHKEFSATPLHARVPLTGLR--RNTWCNLCIDL 139
[Close]
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: UPI001864AC4C (uncharacterized protein C3orf67 homolog n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001864AC4C)

HSP 1 Score: 112 bits (280), Expect = 4.940e-26
Identity = 62/145 (42.76%), Postives = 89/145 (61.38%), Query Frame = 2 
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTG---KCGRLYDKGVRGYVLAVSGGAKS-KMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVA 427
            MF++ YQ G  V++FS  G  P+A WKL G      + +DK ++G+V  + G +++ KMQ PK  +  LGL QR LVLQ+     +D  F +EL +TD+G ++RRL LS+  + +  TPLHA+IPL   R     W NM IDLV+
Sbjct:    1 MFKNEYQGGAVVDIFSAQGNDPVAKWKLYGGQSAISKEFDKEIKGFVYILEGRSQTNKMQIPKDSRMALGLSQRFLVLQMYVPPGKD--FCIELMITDSGNLKRRLYLSTVHKELSATPLHAKIPLSSFRLNI--WCNMCIDLVS 141
[Close]
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: A0A6J2PNT9_COTGO (uncharacterized protein C3orf67 homolog isoform X1 n=5 Tax=Cottoperca gobio TaxID=56716 RepID=A0A6J2PNT9_COTGO)

HSP 1 Score: 112 bits (280), Expect = 4.970e-26
Identity = 65/146 (44.52%), Postives = 93/146 (63.70%), Query Frame = 2 
Query:    2 EMFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCGRL---YDKGVRGYVLAVSGGAKS-KMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVA 427
            +MF++ YQ G  VE+FS  G  P+A WKL G    +   Y+K V+G+V  + G +++ KMQ P+  K +LGL QR LVLQV     +D  FS+EL LTD+  ++RRL LS+  + +  TPLHA+IP  GL+  R  W+ + IDLV+
Sbjct:   28 KMFRNNYQGGAVVEIFSGQGKDPVAKWKLCGGPSAIHKEYNKEVKGFVYCLDGSSQTVKMQMPENGKMSLGLLQRFLVLQVNIPQCKD--FSIELVLTDSEHLKRRLYLSTVHKELSATPLHAKIPFVGLK--RSIWSTLCIDLVS 169
[Close]
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: A0A3B1JSP1_ASTMX (Chromosome 13 C3orf67 homolog n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1JSP1_ASTMX)

HSP 1 Score: 111 bits (278), Expect = 9.140e-26
Identity = 63/143 (44.06%), Postives = 89/143 (62.24%), Query Frame = 2 
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTG---KCGRLYDKGVRGYVLAVSGGAKS-KMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDL 421
            MF++ YQ G  VE+FS  G  P+A WK++G      ++ DK V+G+V ++ G +++ +MQ PK  K  L L QR+LVLQV     +D  FS EL +TD G ++RRL  S+  +    TPLHA++PL GLR  R  W N+ IDL
Sbjct:    1 MFRNEYQGGAIVEIFSAQGKDPVAKWKVSGGLSSISKVLDKEVKGFVYSLEGSSQTHRMQLPKDGKMPLVLIQRYLVLQVNVPLGKD--FSTELVVTDQGHLKRRLYFSTVHKEFSATPLHARVPLTGLR--RNTWCNLCIDL 139
[Close]
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: A0A8J1N0V1_XENLA (protein CFAP20DC-like n=1 Tax=Xenopus laevis TaxID=8355 RepID=A0A8J1N0V1_XENLA)

HSP 1 Score: 111 bits (278), Expect = 9.240e-26
Identity = 61/145 (42.07%), Postives = 92/145 (63.45%), Query Frame = 2 
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCGRL---YDKGVRGYVLAVSGGAKS-KMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVA 427
            MF++ YQ G  VE+FS  G  P+A WKL+G+   +   +DK V+ +V  + G +++ KMQ PK  +  LGL QR L+LQ+     +D  FS EL ++D G I+RRL LS+  + +  TPLHA+IPL G++ +   W N+ ID+V+
Sbjct:    1 MFKNEYQGGAFVEIFSAQGKDPMAKWKLSGRQSAIWKDFDKEVKSFVFVLEGSSQTNKMQLPKESRHNLGLIQRFLILQLYIPLGQD--FSAELLISDLGNIKRRLYLSTVHKELSATPLHAKIPLLGIKRKI--WCNLCIDVVS 141
[Close]
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: UPI00187BE5B2 (uncharacterized protein C3orf67 homolog isoform X3 n=2 Tax=Sparidae TaxID=8169 RepID=UPI00187BE5B2)

HSP 1 Score: 106 bits (264), Expect = 1.220e-25
Identity = 63/145 (43.45%), Postives = 90/145 (62.07%), Query Frame = 2 
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCGRL---YDKGVRGYVLAVSGGAKS-KMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVA 427
            MF++ YQ G  VE+FS  G  P+A WKL+G    +   ++K V+G+V  + G +++ KMQ P+  K  LGL QR LVLQV     +D  FS+EL +TD+  ++RRL LS+  + V  T LHA+IP  GL+  R  W  + IDLV+
Sbjct:    1 MFKNNYQGGAVVEIFSGQGNDPVAKWKLSGGPSAIRKEFNKEVKGFVYCLEGSSQTVKMQMPENGKIALGLLQRFLVLQVNIPQRKD--FSIELVITDSEHLKRRLHLSTVHKEVSVTLLHAKIPFVGLK--RNIWTTLCIDLVS 141
[Close]
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: A0A8J4B353_9CHLO (DUF667 domain-containing protein (Fragment) n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B353_9CHLO)

HSP 1 Score: 111 bits (277), Expect = 1.300e-25
Identity = 62/146 (42.47%), Postives = 85/146 (58.22%), Query Frame = 2 
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGK---CGRLYDKGVRGYVLAVSGGAKSKMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVALA 433
            MF + YQ G  VEV    G  P+A WK++G      ++YDK ++GYV   SG  +  M  PK  ++TLGL Q HL+LQ+        PFSVE+GL+D    RRR++LSS+F  + CTPLH Q+P   L   R  W N+ + +  LA
Sbjct:    1 MFANEYQGGSHVEVLGTQGQNPLAQWKVSGPQKGVQKVYDKALKGYVFVSSGACR--MVLPKDDRSTLGLVQPHLLLQLEVGVGT--PFSVEVGLSDASATRRRVILSSSFSELKCTPLHCQVPFTCLP--RESWLNLVLPIAELA 140
[Close]
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: A8IME4_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IME4_CHLRE)

HSP 1 Score: 111 bits (277), Expect = 1.300e-25
Identity = 62/146 (42.47%), Postives = 88/146 (60.27%), Query Frame = 2 
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGK---CGRLYDKGVRGYVLAVSGGAKSKMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVALA 433
            MF + YQ G  VEV    G  P++ WK++G      ++YDK ++GYV A   GA  KM  P+  +++LGL Q HL+LQ+        PFSVE+G+TD+ G RRR++LSS+F  +  TPLH Q+PL  +   R  W N+ + L  LA
Sbjct:    1 MFSNEYQGGTHVEVLGTQGQNPLSAWKVSGPQKGVQKVYDKALKGYVFAC--GAGCKMALPRDDRSSLGLSQPHLLLQLEIGLGG--PFSVEVGVTDSSGTRRRMILSSSFSELKSTPLHCQVPLSSVP--RDAWLNLVLPLADLA 140
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0011762F372.670e-2646.90uncharacterized protein C3orf67 homolog n=1 Tax=My... [more]
A0A150FX86_GONPE3.710e-2642.47DUF667 domain-containing protein n=1 Tax=Gonium pe... [more]
UPI000BBDD90D4.500e-2644.06uncharacterized protein C3orf67 homolog isoform X3... [more]
UPI001864AC4C4.940e-2642.76uncharacterized protein C3orf67 homolog n=1 Tax=Me... [more]
A0A6J2PNT9_COTGO4.970e-2644.52uncharacterized protein C3orf67 homolog isoform X1... [more]
A0A3B1JSP1_ASTMX9.140e-2644.06Chromosome 13 C3orf67 homolog n=2 Tax=Astyanax mex... [more]
A0A8J1N0V1_XENLA9.240e-2642.07protein CFAP20DC-like n=1 Tax=Xenopus laevis TaxID... [more]
UPI00187BE5B21.220e-2543.45uncharacterized protein C3orf67 homolog isoform X3... [more]
A0A8J4B353_9CHLO1.300e-2542.47DUF667 domain-containing protein (Fragment) n=1 Ta... [more]
A8IME4_CHLRE1.300e-2542.47Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1001contigF-serratus_M_contig1001:97749..100723 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score230.3
Seed ortholog evalue5.5e-58
Seed eggNOG ortholog2880.D8LS32
KEGG koko:K06236
KEGG Pathwayko04151,ko04510,ko04512,ko04611,ko04926,ko04933,ko04974,ko05146,ko05165,map04151,map04510,map04512,map04611,map04926,map04933,map04974,map05146,map05165
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of cilium movement involved in cell motility
EggNOG OGsKOG3213@1,KOG3213@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00536,ko04516
Exons4
Model size435
Cds size429
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1001.124.1prot_F-serratus_M_contig1001.124.1Fucus serratus malepolypeptideF-serratus_M_contig1001 97753..100723 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928792.5215132-UTR-F-serratus_M_contig1001:97748..977521622928792.5215132-UTR-F-serratus_M_contig1001:97748..97752Fucus serratus maleUTRF-serratus_M_contig1001 97749..97752 +
1690962574.0845478-UTR-F-serratus_M_contig1001:97748..977521690962574.0845478-UTR-F-serratus_M_contig1001:97748..97752Fucus serratus maleUTRF-serratus_M_contig1001 97749..97752 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928792.5331895-CDS-F-serratus_M_contig1001:97752..978771622928792.5331895-CDS-F-serratus_M_contig1001:97752..97877Fucus serratus maleCDSF-serratus_M_contig1001 97753..97877 +
1690962574.0986233-CDS-F-serratus_M_contig1001:97752..978771690962574.0986233-CDS-F-serratus_M_contig1001:97752..97877Fucus serratus maleCDSF-serratus_M_contig1001 97753..97877 +
1622928792.5497327-CDS-F-serratus_M_contig1001:99409..994771622928792.5497327-CDS-F-serratus_M_contig1001:99409..99477Fucus serratus maleCDSF-serratus_M_contig1001 99410..99477 +
1690962574.1146743-CDS-F-serratus_M_contig1001:99409..994771690962574.1146743-CDS-F-serratus_M_contig1001:99409..99477Fucus serratus maleCDSF-serratus_M_contig1001 99410..99477 +
1622928792.5619183-CDS-F-serratus_M_contig1001:100036..1002001622928792.5619183-CDS-F-serratus_M_contig1001:100036..100200Fucus serratus maleCDSF-serratus_M_contig1001 100037..100200 +
1690962574.1272187-CDS-F-serratus_M_contig1001:100036..1002001690962574.1272187-CDS-F-serratus_M_contig1001:100036..100200Fucus serratus maleCDSF-serratus_M_contig1001 100037..100200 +
1622928792.5756335-CDS-F-serratus_M_contig1001:100651..1007231622928792.5756335-CDS-F-serratus_M_contig1001:100651..100723Fucus serratus maleCDSF-serratus_M_contig1001 100652..100723 +
1690962574.1367092-CDS-F-serratus_M_contig1001:100651..1007231690962574.1367092-CDS-F-serratus_M_contig1001:100651..100723Fucus serratus maleCDSF-serratus_M_contig1001 100652..100723 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1001.124.1

>prot_F-serratus_M_contig1001.124.1 ID=prot_F-serratus_M_contig1001.124.1|Name=mRNA_F-serratus_M_contig1001.124.1|organism=Fucus serratus male|type=polypeptide|length=143bp
MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCGRLYDKGVRGYVLAVSGG
AKSKMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRR
RLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVALA
back to top

mRNA from alignment at F-serratus_M_contig1001:97749..100723+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1001.124.1 ID=mRNA_F-serratus_M_contig1001.124.1|Name=mRNA_F-serratus_M_contig1001.124.1|organism=Fucus serratus male|type=mRNA|length=2975bp|location=Sequence derived from alignment at F-serratus_M_contig1001:97749..100723+ (Fucus serratus male)
CGAGATGTTTCAATCGGCGTACCAAGACGGCGACTGCGTTGAAGTATTTT
CCCCGGGGGGGACGCAGCCGATAGCGCACTGGAAGCTGACGGGCAAATGC
GGGAGGTTGTACGACAAAGGAGTGAGGGGGTAAGGAGAGTACTGCACTGT
TTTGTACTGGTAACGAGTAGACTAAAGGGATTTCACAATATTACTATTAA
TACACAGTATAATAGTATCTACTACTGTACTCTGCCGGTCGCCCCGGTAG
CTCAGAGGTACCTCGTTGCCCTCTGACACGTTGAGGCGTGAGTTCGATCC
CGGCAAACGGTATTTTTCTCACTAAAAAACTACAAAAATAAAAATGCCCA
ACGGGTGGAGAACCAATAATTCGACTTCACGGTCGACGAGGGAAAGGAAT
GGCTGAATCCTTCTCGCGAGAAAATGAAGGCACGCACCGCAGAAAGAAGG
TGGTTCAGAAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTAT
GTCCTCGAACTTGATGTCCAGAATGAATGGGAAGAAAACACACACACACA
CACACACACACACAAGTATCATTGATCCCCCCTCGGGAGGATCAATGCGA
GTGGCATAGAATGACTAGGATGACACGGCCGGATTGCGTGGTTATGTGCA
ATTTAATAAATACACACACACACACACACGTCGCGTCTGATCAGAGGTTT
TCGTAGTAAGTATCATTAATCCCCCTCGGGAGGATCAATGCGAGTGGCAT
AGAATGACTAGGATGACCGGGCCGGATTGCGCGGTTATGTGCAATTTAAT
AAATACACACACACACACACACACACACACACCCCCTCGGGAGGATCAAT
GCGAGTGGCATAGAATGACTAGGATGGAACTCTGAGCTTAAGTAAGAATT
GTACAAGTAGAGAGAGCGTGTCCCCTTTGTCGCGTCTGATCAGAGGTTTT
CGTAATAAGTATCATTGATCCCCCCCGGGAGGATCAATGCGAGTGGCATA
GAATGACTAGGATGACAGGGCCGGATTGCGTGGTTATGTGCAATTTAATA
AATaCACACACACACACACACAATAAGTATCATTAATCCCCCCTCGGGAG
GATCAATGCGAGTGGCATAGAATAACTAGGATGACGGGGCCGGATTGCGC
GGTTATGTGCAATTTAATAAATACACACACACACACTCTGTAACTGTATC
TACTGTATCAATCAGTAGATGCGAAGTACGACTGCTGCAGTAGTAGTTGG
GAGAGCTCTCGAAGGCGCTGCGCGCTAAAATAAAAATGAGGGCTTGCCCC
GGCGGTTCAGTTGGTAACCTCGAAACCTTCTGACGTTGTGACGTGCGTCC
GAATCTCGGCGCAGTCACACGAACCGGGATATTTCCTCATGTAATAAAAT
AAAGTAGAATGAAATAAAATGCCCAACAAGTGGTACACAAAAATTCGACT
TCGCGGTCGACGCGGGAGAGGAAGCAGGGCTGAATCCCTTCGCGCGAAGA
TCCCGCAGTTTTGCAGTCTGTACCTTGTCTGCTGTGAAAATGCGTACGAT
TATGTTGCCTTGGTCGCACGGCAGGGCGCGCGCACGGCCCTCGCCCGATT
TCCCTCCTTAACTTTGAACTTCCGGCGTGACCGTGACCCCCATGCATCGA
CGGCGCGACAGATATGTCTTGGCTGTCAGCGGAGGAGCGAAGTCGAAGAT
GCAAGCACCAAAAACGCCCAAGGCAACGCGTGAGTCTTCCTACATATCGG
GCCAACCGCTCAAGAACGCTGTAGGAACCACCTCGTCCCCTGAATCCCGG
CCTGTCATACTGACGTTCCTATCCCCAAACCCTACCTCCCACGTGTTCGT
CTGCAAGCCGCCAACAGTGATCGGTCAACGATTGCATGTCCAGACACACA
CTACAGTATATTTGGAGCTATCCAGTGCTCTTTAGCTCTAGAGCTCTGTC
GTGATGTTTTGTCTCGTCAGATGGCTATTGTCAAGAGCTAGCTAGGCCCT
TGGTGCAACTCACGCCCTGTCCCGGGGTTGATTACGTCTGGCCCTAACAT
GTGTTCAGGCCTGTGGATCAACCGCGACGTTAGAACTGAGAAAAACGAAT
TAGTGAAGAGGCGCGACTGGGCTCGGGTTGGACCAGTGCTCGCCATTCAC
ACGATTGCCTTTAAAACCTTCTTGCTCCGTCCCTTGCCACAAACGCCGCA
AAACAATGTCACTTTGGACTTTTTTTCTGCTGTATTTCCCACTGTATTTT
GTACTATATTTCCTATTGTGCCGCAAATGCGAGGAAAGTGGGCTTGCGTC
AGCGGCACTTGGTGCTGCAGGTCTTGACGGCGAGTTCCGAGGATAAGCCG
TTCTCTGTGGAGCTGGGTCTGACGGATACGGGCGGTATCCGACGGCGTCT
CGTTCTCTCTTCTGCCTTCCGCGTGGTACACTGCACGCCTCTTCACGCCC
AGGTCTTGATGTCCACAGCTATGAGCGCATATACGCGTCGCAGGGTGTCG
TCGAGTAGGTTACATTACGAAGGTTTGGTACCCCTCTGCTGCCCCTCTCT
TCTATACCACGCCCGGCCAGGGTGTGGTCGCGCTTTGCTCTTTGCTAACC
TTGCGACTGATTCACTTCGAGGCGTTGCGCATAAGGAGGGGTGGTTTTTA
TGTCTGTCGCTTCGTCGGTAATCGCTAGCGGTGACTGGGATGCACCCAAC
GTGATGACATATGACAACACTTGTAGAACACTGTTCAGCACACGTAAGAG
ACAGGAAGCAAATGAGATATCCAGCGTTAAAAATGCAGAATGGTTGCCAG
GAATGAATACATAACCCCCCCCCCCCCCACACACACACCGACTCGTCGAC
AGGCGATGCCGCAGATCATAATTGACCTCATGAAGACGCCGCGTGCATTT
CAGATTCCCCTGCCGGGCCTGCGCGAGCGGCGAGGCGGGTGGGCCAACAT
GAGCATAGATTTAGTGGCTTTGGCG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1001:97749..100723+

>mRNA_F-serratus_M_contig1001.124.1 ID=mRNA_F-serratus_M_contig1001.124.1|Name=mRNA_F-serratus_M_contig1001.124.1|organism=Fucus serratus male|type=CDS|length=858bp|location=Sequence derived from alignment at F-serratus_M_contig1001:97749..100723+ (Fucus serratus male)
ATGTTTCAATCGGCGTACCAAGACGGCGACTGCGTTGAAGTATTTTCCCC
GGGGGGGACGCAGCCGATAGCGCACTGGAAGCTGACGGGCAAATGCGGGA
GGTTGTACGACAAAGGAGTGAGGGGATGTTTCAATCGGCGTACCAAGACG
GCGACTGCGTTGAAGTATTTTCCCCGGGGGGGACGCAGCCGATAGCGCAC
TGGAAGCTGACGGGCAAATGCGGGAGGTTGTACGACAAAGGAGTGAGGGG
ATATGTCTTGGCTGTCAGCGGAGGAGCGAAGTCGAAGATGCAAGCACCAA
AAACGCCCAAGGCAACGCATATGTCTTGGCTGTCAGCGGAGGAGCGAAGT
CGAAGATGCAAGCACCAAAAACGCCCAAGGCAACGCTGGGCTTGCGTCAG
CGGCACTTGGTGCTGCAGGTCTTGACGGCGAGTTCCGAGGATAAGCCGTT
CTCTGTGGAGCTGGGTCTGACGGATACGGGCGGTATCCGACGGCGTCTCG
TTCTCTCTTCTGCCTTCCGCGTGGTACACTGCACGCCTCTTCACGCCCAG
TGGGCTTGCGTCAGCGGCACTTGGTGCTGCAGGTCTTGACGGCGAGTTCC
GAGGATAAGCCGTTCTCTGTGGAGCTGGGTCTGACGGATACGGGCGGTAT
CCGACGGCGTCTCGTTCTCTCTTCTGCCTTCCGCGTGGTACACTGCACGC
CTCTTCACGCCCAGATTCCCCTGCCGGGCCTGCGCGAGCGGCGAGGCGGG
TGGGCCAACATGAGCATAGATTTAGTGGCTTTGGCGATTCCCCTGCCGGG
CCTGCGCGAGCGGCGAGGCGGGTGGGCCAACATGAGCATAGATTTAGTGG
CTTTGGCG
back to top