mRNA_F-serratus_M_contig1001.124.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1001.124.1
Unique NamemRNA_F-serratus_M_contig1001.124.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: D8LS32_ECTSI (DUF667 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS32_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 3.990e-69
Identity = 110/142 (77.46%), Postives = 122/142 (85.92%), Query Frame = 2
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCGRLYDKGVRGYVLAVSGGAKSKMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVAL 430
            MFQSAYQDGDCVEVFSP G  P A WKL+GK  R+Y+KGV+GYVLAVSGGA SKMQ PK PK+ LGLRQRHLVLQVLT++S DKPFS+ELGLTDTGG RRRLVLSS+FR +HCTPLHAQIPL GL   RG WAN++IDLV L
Sbjct:    1 MFQSAYQDGDCVEVFSPAGKNPAADWKLSGKVVRMYEKGVKGYVLAVSGGATSKMQLPKAPKSLLGLRQRHLVLQVLTSTSHDKPFSLELGLTDTGGTRRRLVLSSSFRALHCTPLHAQIPLVGLERHRGSWANLTIDLVGL 142          
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: A0A6H5JWT5_9PHAE (DUF667 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT5_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 3.160e-32
Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 2
Query:  176 PKTPKATL-GLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVAL 430
            P  P+  L GLRQRHLVLQVLT++S+DKPFS+ELGLTDTGG RRRLVLSS+FR +HCTPLHAQIPL GL   RG WAN++IDLV L
Sbjct:    6 PPWPRFGLVGLRQRHLVLQVLTSTSQDKPFSLELGLTDTGGTRRRLVLSSSFRALHCTPLHAQIPLVGLERYRGSWANLTIDLVGL 91          
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: UPI0018D72AEB (protein CFAP20DC-like isoform X1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D72AEB)

HSP 1 Score: 117 bits (294), Expect = 6.620e-28
Identity = 67/145 (46.21%), Postives = 93/145 (64.14%), Query Frame = 2
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCG--RLYDKGVRGYVLAVSG-GAKSKMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVAL 430
            MF+S +Q G  VEVFS  G +P+A WKLTG     ++Y+K  + +V  + G G  +K+Q PK  K TL L QR LVLQV     +D  FS+ELG++D G  +RRL+ S+A + +  TPLHA+IPL  +R  R  W N+ IDLV++
Sbjct:    1 MFKSEFQGGAYVEVFSCQGKEPLAKWKLTGAASIHKVYEKEAKSFVHVLEGAGTSTKIQLPKDVKQTLALVQRFLVLQVFVPLGQD--FSIELGVSDMGNNKRRLLFSTAQKEIAATPLHAKIPLTVVR--RAMWLNLCIDLVSM 141          
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: A0A8B7ZQX2_ACAPL (uncharacterized protein C3orf67 homolog isoform X1 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZQX2_ACAPL)

HSP 1 Score: 115 bits (289), Expect = 3.110e-27
Identity = 66/145 (45.52%), Postives = 93/145 (64.14%), Query Frame = 2
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCG--RLYDKGVRGYVLAVSG-GAKSKMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVAL 430
            MF+S +Q G  VEVFS  G +P+A WKLTG     ++Y+K  + +V  + G G  +K+Q PK  K TL L QR LV+QV     +D  FSVELG++D G  +RRL+ S+A + +  TPLHA+IPL  ++  R  W N+ IDLV++
Sbjct:    1 MFKSEFQGGAHVEVFSCQGKEPLAKWKLTGSASIHKVYEKEAKSFVHVLEGAGTSTKIQLPKDSKLTLALVQRFLVVQVFVPLGQD--FSVELGVSDMGNNKRRLLFSTAQKEIAATPLHAKIPLTIVK--RAVWLNLCIDLVSI 141          
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: UPI0011C4A6E5 (uncharacterized protein C3orf67 homolog n=1 Tax=Calypte anna TaxID=9244 RepID=UPI0011C4A6E5)

HSP 1 Score: 115 bits (288), Expect = 4.140e-27
Identity = 66/145 (45.52%), Postives = 89/145 (61.38%), Query Frame = 2
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCGRL---YDKGVRGYVLAVSGGAK-SKMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVA 427
            MF++ YQ G  VE+FS  G  P A WK+ G    +   YDK V+G+V  + G ++ +KMQ PK  + TLGL Q+ L LQ+     +D  FS EL +TD G I+RRL LS+ ++ +  TPLHA+IPL     +R  W NM IDLVA
Sbjct:    1 MFKNQYQGGPFVEIFSAQGKNPGAKWKILGNPSAIRKEYDKEVKGFVFVLEGSSQINKMQLPKKTRQTLGLVQQFLTLQIFVPLGQD--FSTELLITDLGNIKRRLYLSTVYKELSVTPLHAKIPL--FMIKRKIWCNMCIDLVA 141          
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: UPI001444A0A2 (uncharacterized protein C3orf67 homolog n=1 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI001444A0A2)

HSP 1 Score: 114 bits (286), Expect = 7.720e-27
Identity = 66/146 (45.21%), Postives = 96/146 (65.75%), Query Frame = 2
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCGRL---YDKGVRGYVLAVSGGAKS-KMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVAL 430
            MF++ YQ G  VEVFS  G  P+A WKL G    +   ++K V+G+V  + G +++ KMQ P++ K +LGL QR LVLQV    S+D  FSVEL +TD+  ++RRL LS+ ++ +  TPLHA+IP  GL+  R  W+ + IDLV++
Sbjct:    1 MFRNNYQGGAVVEVFSGQGKDPVAKWKLCGGPSAIHKEFNKEVKGFVYCLEGSSQTVKMQMPESGKTSLGLLQRFLVLQVNIPQSKD--FSVELVITDSERLKRRLHLSTVYKELSATPLHAKIPFVGLK--RSIWSTLCIDLVSI 142          
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: A0A7S0X353_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X353_9CHLO)

HSP 1 Score: 106 bits (264), Expect = 8.540e-27
Identity = 56/122 (45.90%), Postives = 74/122 (60.66%), Query Frame = 2
Query:   14 SAYQDGDCVEVFSPGGTQPIAHWKLTG--KCGRLYDKGVRGYVLAVSGGAKSKMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLP 373
            + +Q G  VEVFSP G  P + WK+ G     R+Y+K V+GYV A+SGG   KMQ PK  +  LGL+Q +LV Q+     +    S E+G++D    RRRL  SS+F  V  TPLH Q+PLP
Sbjct:    3 TTFQGGPFVEVFSPQGKDPTSAWKMCGGKAVKRVYEKSVKGYVYAISGGPGHKMQLPKDERKGLGLKQPYLVFQIYVPVGQH--ISFEVGVSDAESTRRRLFFSSSFNDVKATPLHCQVPLP 122          
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: UPI0009B424E7 (uncharacterized protein C3orf67 homolog n=1 Tax=Labrus bergylta TaxID=56723 RepID=UPI0009B424E7)

HSP 1 Score: 114 bits (284), Expect = 1.430e-26
Identity = 68/147 (46.26%), Postives = 94/147 (63.95%), Query Frame = 2
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCGRL---YDKGVRGYVLAVSGGAKS-KMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVALA 433
            MF++ YQ G  VEVFS  G  P+A WKL+G    +   YDK VRG+V  + G +++ KMQ P+  K +LGL QR LVLQV     +D  FS+EL +TD+  ++RRL LS+  + +  T LHA+IPL GL+  R  W+ + IDLV+ A
Sbjct:    1 MFKNNYQGGSAVEVFSGQGKDPVAKWKLSGGPSAIHKEYDKEVRGFVYCLEGSSQTVKMQMPENGKMSLGLLQRFLVLQVNIPQLKD--FSIELVITDSQHLKRRLRLSTVHKELSATLLHAKIPLVGLK--RNIWSTLYIDLVSYA 143          
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: A0A665UF24_ECHNA (Zgc:162324 n=1 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665UF24_ECHNA)

HSP 1 Score: 108 bits (270), Expect = 1.950e-26
Identity = 65/147 (44.22%), Postives = 93/147 (63.27%), Query Frame = 2
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTG---KCGRLYDKGVRGYVLAVSGGAKS-KMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVALA 433
            MF++ YQ G  VEVFS  G  P+A WKL+G      + Y+K V+G+V  + G +++ KMQ P+  K +LGL QR LVLQV     +D  FSVEL +TD+  ++RRL LS+  + +  T LHA+IPL GL+  R  W+ +  DLV+ +
Sbjct:    1 MFRNNYQGGAVVEVFSGQGKDPVAKWKLSGGPSAISKEYNKEVKGFVYCLEGSSQTVKMQMPQNGKMSLGLLQRFLVLQVNIPQCKD--FSVELVITDSEHLKRRLHLSTVHKELSTTLLHAKIPLVGLK--RNIWSTLCFDLVSFS 143          
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Match: UPI00117BFC83 (uncharacterized protein C3orf67 homolog n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=UPI00117BFC83)

HSP 1 Score: 113 bits (282), Expect = 2.660e-26
Identity = 65/145 (44.83%), Postives = 93/145 (64.14%), Query Frame = 2
Query:    5 MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCGRL---YDKGVRGYVLAVSGGAKS-KMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRRRLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVA 427
            MF++ YQ G  VE+FS  G  P+A WKL G    +   Y+K ++G+V  + G +++ KMQ P+  K +LGL QR LVLQV    S+D  FS+EL +TDTG ++RRL LS+  + +  T  HA+IPL GL+  R  W+ + IDLV+
Sbjct:    1 MFRNNYQGGAVVEIFSAQGKDPVAKWKLCGGPSAIHKEYNKEIKGFVYCLEGSSQTVKMQMPENGKMSLGLLQRFLVLQVNIPQSKD--FSIELVITDTGHLKRRLYLSTVHKELSVTLWHARIPLAGLK--RNIWSTLCIDLVS 141          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1001.124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS32_ECTSI3.990e-6977.46DUF667 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWT5_9PHAE3.160e-3274.42DUF667 domain-containing protein n=1 Tax=Ectocarpu... [more]
UPI0018D72AEB6.620e-2846.21protein CFAP20DC-like isoform X1 n=2 Tax=Patiria m... [more]
A0A8B7ZQX2_ACAPL3.110e-2745.52uncharacterized protein C3orf67 homolog isoform X1... [more]
UPI0011C4A6E54.140e-2745.52uncharacterized protein C3orf67 homolog n=1 Tax=Ca... [more]
UPI001444A0A27.720e-2745.21uncharacterized protein C3orf67 homolog n=1 Tax=Ep... [more]
A0A7S0X353_9CHLO8.540e-2745.90Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
UPI0009B424E71.430e-2646.26uncharacterized protein C3orf67 homolog n=1 Tax=La... [more]
A0A665UF24_ECHNA1.950e-2644.22Zgc:162324 n=1 Tax=Echeneis naucrates TaxID=173247... [more]
UPI00117BFC832.660e-2644.83uncharacterized protein C3orf67 homolog n=1 Tax=Sp... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1001contigF-serratus_M_contig1001:97749..100723 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score230.3
Seed ortholog evalue5.5e-58
Seed eggNOG ortholog2880.D8LS32
KEGG koko:K06236
KEGG Pathwayko04151,ko04510,ko04512,ko04611,ko04926,ko04933,ko04974,ko05146,ko05165,map04151,map04510,map04512,map04611,map04926,map04933,map04974,map05146,map05165
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of cilium movement involved in cell motility
EggNOG OGsKOG3213@1,KOG3213@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00536,ko04516
Exons4
Model size435
Cds size429
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1001.124.1prot_F-serratus_M_contig1001.124.1Fucus serratus malepolypeptideF-serratus_M_contig1001 97753..100723 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928792.5215132-UTR-F-serratus_M_contig1001:97748..977521622928792.5215132-UTR-F-serratus_M_contig1001:97748..97752Fucus serratus maleUTRF-serratus_M_contig1001 97749..97752 +
1690962574.0845478-UTR-F-serratus_M_contig1001:97748..977521690962574.0845478-UTR-F-serratus_M_contig1001:97748..97752Fucus serratus maleUTRF-serratus_M_contig1001 97749..97752 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928792.5331895-CDS-F-serratus_M_contig1001:97752..978771622928792.5331895-CDS-F-serratus_M_contig1001:97752..97877Fucus serratus maleCDSF-serratus_M_contig1001 97753..97877 +
1690962574.0986233-CDS-F-serratus_M_contig1001:97752..978771690962574.0986233-CDS-F-serratus_M_contig1001:97752..97877Fucus serratus maleCDSF-serratus_M_contig1001 97753..97877 +
1622928792.5497327-CDS-F-serratus_M_contig1001:99409..994771622928792.5497327-CDS-F-serratus_M_contig1001:99409..99477Fucus serratus maleCDSF-serratus_M_contig1001 99410..99477 +
1690962574.1146743-CDS-F-serratus_M_contig1001:99409..994771690962574.1146743-CDS-F-serratus_M_contig1001:99409..99477Fucus serratus maleCDSF-serratus_M_contig1001 99410..99477 +
1622928792.5619183-CDS-F-serratus_M_contig1001:100036..1002001622928792.5619183-CDS-F-serratus_M_contig1001:100036..100200Fucus serratus maleCDSF-serratus_M_contig1001 100037..100200 +
1690962574.1272187-CDS-F-serratus_M_contig1001:100036..1002001690962574.1272187-CDS-F-serratus_M_contig1001:100036..100200Fucus serratus maleCDSF-serratus_M_contig1001 100037..100200 +
1622928792.5756335-CDS-F-serratus_M_contig1001:100651..1007231622928792.5756335-CDS-F-serratus_M_contig1001:100651..100723Fucus serratus maleCDSF-serratus_M_contig1001 100652..100723 +
1690962574.1367092-CDS-F-serratus_M_contig1001:100651..1007231690962574.1367092-CDS-F-serratus_M_contig1001:100651..100723Fucus serratus maleCDSF-serratus_M_contig1001 100652..100723 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1001.124.1

>prot_F-serratus_M_contig1001.124.1 ID=prot_F-serratus_M_contig1001.124.1|Name=mRNA_F-serratus_M_contig1001.124.1|organism=Fucus serratus male|type=polypeptide|length=143bp
MFQSAYQDGDCVEVFSPGGTQPIAHWKLTGKCGRLYDKGVRGYVLAVSGG
AKSKMQAPKTPKATLGLRQRHLVLQVLTASSEDKPFSVELGLTDTGGIRR
RLVLSSAFRVVHCTPLHAQIPLPGLRERRGGWANMSIDLVALA
back to top

mRNA from alignment at F-serratus_M_contig1001:97749..100723+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1001.124.1 ID=mRNA_F-serratus_M_contig1001.124.1|Name=mRNA_F-serratus_M_contig1001.124.1|organism=Fucus serratus male|type=mRNA|length=2975bp|location=Sequence derived from alignment at F-serratus_M_contig1001:97749..100723+ (Fucus serratus male)
CGAGATGTTTCAATCGGCGTACCAAGACGGCGACTGCGTTGAAGTATTTT CCCCGGGGGGGACGCAGCCGATAGCGCACTGGAAGCTGACGGGCAAATGC GGGAGGTTGTACGACAAAGGAGTGAGGGGGTAAGGAGAGTACTGCACTGT TTTGTACTGGTAACGAGTAGACTAAAGGGATTTCACAATATTACTATTAA TACACAGTATAATAGTATCTACTACTGTACTCTGCCGGTCGCCCCGGTAG CTCAGAGGTACCTCGTTGCCCTCTGACACGTTGAGGCGTGAGTTCGATCC CGGCAAACGGTATTTTTCTCACTAAAAAACTACAAAAATAAAAATGCCCA ACGGGTGGAGAACCAATAATTCGACTTCACGGTCGACGAGGGAAAGGAAT GGCTGAATCCTTCTCGCGAGAAAATGAAGGCACGCACCGCAGAAAGAAGG TGGTTCAGAAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTAT GTCCTCGAACTTGATGTCCAGAATGAATGGGAAGAAAACACACACACACA CACACACACACACAAGTATCATTGATCCCCCCTCGGGAGGATCAATGCGA GTGGCATAGAATGACTAGGATGACACGGCCGGATTGCGTGGTTATGTGCA ATTTAATAAATACACACACACACACACACGTCGCGTCTGATCAGAGGTTT TCGTAGTAAGTATCATTAATCCCCCTCGGGAGGATCAATGCGAGTGGCAT AGAATGACTAGGATGACCGGGCCGGATTGCGCGGTTATGTGCAATTTAAT AAATACACACACACACACACACACACACACACCCCCTCGGGAGGATCAAT GCGAGTGGCATAGAATGACTAGGATGGAACTCTGAGCTTAAGTAAGAATT GTACAAGTAGAGAGAGCGTGTCCCCTTTGTCGCGTCTGATCAGAGGTTTT CGTAATAAGTATCATTGATCCCCCCCGGGAGGATCAATGCGAGTGGCATA GAATGACTAGGATGACAGGGCCGGATTGCGTGGTTATGTGCAATTTAATA AATaCACACACACACACACACAATAAGTATCATTAATCCCCCCTCGGGAG GATCAATGCGAGTGGCATAGAATAACTAGGATGACGGGGCCGGATTGCGC GGTTATGTGCAATTTAATAAATACACACACACACACTCTGTAACTGTATC TACTGTATCAATCAGTAGATGCGAAGTACGACTGCTGCAGTAGTAGTTGG GAGAGCTCTCGAAGGCGCTGCGCGCTAAAATAAAAATGAGGGCTTGCCCC GGCGGTTCAGTTGGTAACCTCGAAACCTTCTGACGTTGTGACGTGCGTCC GAATCTCGGCGCAGTCACACGAACCGGGATATTTCCTCATGTAATAAAAT AAAGTAGAATGAAATAAAATGCCCAACAAGTGGTACACAAAAATTCGACT TCGCGGTCGACGCGGGAGAGGAAGCAGGGCTGAATCCCTTCGCGCGAAGA TCCCGCAGTTTTGCAGTCTGTACCTTGTCTGCTGTGAAAATGCGTACGAT TATGTTGCCTTGGTCGCACGGCAGGGCGCGCGCACGGCCCTCGCCCGATT TCCCTCCTTAACTTTGAACTTCCGGCGTGACCGTGACCCCCATGCATCGA CGGCGCGACAGATATGTCTTGGCTGTCAGCGGAGGAGCGAAGTCGAAGAT GCAAGCACCAAAAACGCCCAAGGCAACGCGTGAGTCTTCCTACATATCGG GCCAACCGCTCAAGAACGCTGTAGGAACCACCTCGTCCCCTGAATCCCGG CCTGTCATACTGACGTTCCTATCCCCAAACCCTACCTCCCACGTGTTCGT CTGCAAGCCGCCAACAGTGATCGGTCAACGATTGCATGTCCAGACACACA CTACAGTATATTTGGAGCTATCCAGTGCTCTTTAGCTCTAGAGCTCTGTC GTGATGTTTTGTCTCGTCAGATGGCTATTGTCAAGAGCTAGCTAGGCCCT TGGTGCAACTCACGCCCTGTCCCGGGGTTGATTACGTCTGGCCCTAACAT GTGTTCAGGCCTGTGGATCAACCGCGACGTTAGAACTGAGAAAAACGAAT TAGTGAAGAGGCGCGACTGGGCTCGGGTTGGACCAGTGCTCGCCATTCAC ACGATTGCCTTTAAAACCTTCTTGCTCCGTCCCTTGCCACAAACGCCGCA AAACAATGTCACTTTGGACTTTTTTTCTGCTGTATTTCCCACTGTATTTT GTACTATATTTCCTATTGTGCCGCAAATGCGAGGAAAGTGGGCTTGCGTC AGCGGCACTTGGTGCTGCAGGTCTTGACGGCGAGTTCCGAGGATAAGCCG TTCTCTGTGGAGCTGGGTCTGACGGATACGGGCGGTATCCGACGGCGTCT CGTTCTCTCTTCTGCCTTCCGCGTGGTACACTGCACGCCTCTTCACGCCC AGGTCTTGATGTCCACAGCTATGAGCGCATATACGCGTCGCAGGGTGTCG TCGAGTAGGTTACATTACGAAGGTTTGGTACCCCTCTGCTGCCCCTCTCT TCTATACCACGCCCGGCCAGGGTGTGGTCGCGCTTTGCTCTTTGCTAACC TTGCGACTGATTCACTTCGAGGCGTTGCGCATAAGGAGGGGTGGTTTTTA TGTCTGTCGCTTCGTCGGTAATCGCTAGCGGTGACTGGGATGCACCCAAC GTGATGACATATGACAACACTTGTAGAACACTGTTCAGCACACGTAAGAG ACAGGAAGCAAATGAGATATCCAGCGTTAAAAATGCAGAATGGTTGCCAG GAATGAATACATAACCCCCCCCCCCCCCACACACACACCGACTCGTCGAC AGGCGATGCCGCAGATCATAATTGACCTCATGAAGACGCCGCGTGCATTT CAGATTCCCCTGCCGGGCCTGCGCGAGCGGCGAGGCGGGTGGGCCAACAT GAGCATAGATTTAGTGGCTTTGGCG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1001:97749..100723+

>mRNA_F-serratus_M_contig1001.124.1 ID=mRNA_F-serratus_M_contig1001.124.1|Name=mRNA_F-serratus_M_contig1001.124.1|organism=Fucus serratus male|type=CDS|length=858bp|location=Sequence derived from alignment at F-serratus_M_contig1001:97749..100723+ (Fucus serratus male)
ATGTTTCAATCGGCGTACCAAGACGGCGACTGCGTTGAAGTATTTTCCCC
GGGGGGGACGCAGCCGATAGCGCACTGGAAGCTGACGGGCAAATGCGGGA
GGTTGTACGACAAAGGAGTGAGGGGATGTTTCAATCGGCGTACCAAGACG
GCGACTGCGTTGAAGTATTTTCCCCGGGGGGGACGCAGCCGATAGCGCAC
TGGAAGCTGACGGGCAAATGCGGGAGGTTGTACGACAAAGGAGTGAGGGG
ATATGTCTTGGCTGTCAGCGGAGGAGCGAAGTCGAAGATGCAAGCACCAA
AAACGCCCAAGGCAACGCATATGTCTTGGCTGTCAGCGGAGGAGCGAAGT
CGAAGATGCAAGCACCAAAAACGCCCAAGGCAACGCTGGGCTTGCGTCAG
CGGCACTTGGTGCTGCAGGTCTTGACGGCGAGTTCCGAGGATAAGCCGTT
CTCTGTGGAGCTGGGTCTGACGGATACGGGCGGTATCCGACGGCGTCTCG
TTCTCTCTTCTGCCTTCCGCGTGGTACACTGCACGCCTCTTCACGCCCAG
TGGGCTTGCGTCAGCGGCACTTGGTGCTGCAGGTCTTGACGGCGAGTTCC
GAGGATAAGCCGTTCTCTGTGGAGCTGGGTCTGACGGATACGGGCGGTAT
CCGACGGCGTCTCGTTCTCTCTTCTGCCTTCCGCGTGGTACACTGCACGC
CTCTTCACGCCCAGATTCCCCTGCCGGGCCTGCGCGAGCGGCGAGGCGGG
TGGGCCAACATGAGCATAGATTTAGTGGCTTTGGCGATTCCCCTGCCGGG
CCTGCGCGAGCGGCGAGGCGGGTGGGCCAACATGAGCATAGATTTAGTGG
CTTTGGCG
back to top