mRNA_F-serratus_M_contig1001.120.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: J9HRT6_9SPIT (DFP domain-containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HRT6_9SPIT) HSP 1 Score: 152 bits (383), Expect = 8.390e-35 Identity = 89/284 (31.34%), Postives = 139/284 (48.94%), Query Frame = 3 Query: 1050 LMTEKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKSDRLE---VVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPEELSSS--LDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVR----EGQHDPSNSYYNRDYLVLVE 1874 L T + K + L + L ++ N E N LWDNYA EW WV+ M ++ + V+G+EWS + +V ++I+PN++ + V EIG GGGRV +L C DIS M+K+ + + Y P+ P+E+ + DFI +DV VHVD+H + + ++++ F+S AN S G++RF Q K+ V GFYFM PD++R ++ + G +VVR E D N YY+RD L+ ++ Sbjct: 4 LQTHQQKLPSTAAQELARMLNKSIANTAPDNIELNTTLWDNYAREWSTEKDWVKNMIKDNQQEARTQELVLGEEWSDLQSFQQVFDEYIIPNLSNDKKVLEIGVGGGRVARLSAELCKELHCVDISSEMIKKAKQNTNMHQNIHF----YHNEVSPKFPQEVINQGPFDFIYSFDVFVHVDIHTLRDTLLNLKQLMREDTLFFISVANLCS----------EKGYERFKKQSKFKVAGFYFMSPDIIRKIVHETGFQVVRCQLDENHFDSKNLYYHRDILLTLK 273
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A7S1W1D4_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1W1D4_ALECA) HSP 1 Score: 136 bits (343), Expect = 3.050e-33 Identity = 72/191 (37.70%), Postives = 101/191 (52.88%), Query Frame = 3 Query: 1308 LPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEKP 1880 +P++ EIG GGGR+ V +L CFD+S ML + +G C + + P + SS DF+ +DV VH+DLH + +R + +VL+PGG F+S AN L+P GW RF Q YSVGGFYF+ PD+ R +L + GL +VR N+Y NRD LVL ++P Sbjct: 1 MPHLGPSVRAAEIGSGGGRIAARAAGRVRELVCFDVSAEMLSAAKKHLGA--CGLENVCFEHVQGEGDYPAQYSSGFDFVYSFDVFVHMDLHQMRRTLRCVRQVLRPGGLCFISFANLLAP----------DGWRRFARQQSYSVGGFYFISPDIARCLLRRVGLEIVRMSAPQAENAYLNRDLLVLAQRP 179
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A7S3XH85_OXYMA (Hypothetical protein (Fragment) n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S3XH85_OXYMA) HSP 1 Score: 118 bits (295), Expect = 6.240e-27 Identity = 63/124 (50.81%), Postives = 78/124 (62.90%), Query Frame = 3 Query: 1086 VAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKSDRLEV--VGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAV 1451 VAGLV +L A+VY DA N TNRKLWD YAA W+P+A +V+KM+ + VGDEWS E V+ D+ILP+ + V EIG GGGRV E+ R +L CFDIS+NML R AV Sbjct: 16 VAGLVDALAPAMVYTDAPNAVTNRKLWDAYAAAWDPSADFVKKMSSSLPPGGASIRHVGDEWSDVESFQEVLRDWILPHAGN-AIVAEIGSGGGRVAVELSRVAQRLECFDISQNMLSRASAAV 138
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A0G4HSH1_9ALVE (Methyltransf_12 domain-containing protein (Fragment) n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HSH1_9ALVE) HSP 1 Score: 119 bits (298), Expect = 1.390e-25 Identity = 80/268 (29.85%), Postives = 119/268 (44.40%), Query Frame = 3 Query: 1218 AGGSKSDRLEVVGDEWSSREEVLRVIGDFILPNVT----------------TESN--VGEIGCGGGRVTTEVFRE----VGQLTCFDISKNMLKRTRDAVGD---------------------------------EKCAGGGK-------VKYVLLS----KPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQ 1823 A G S+ VG EWS E + ++ D+ILP ++ +E VGEIGCG GRV V + + QL CFD+S ML+ R +G ++C G +++ LL ++P +S DF+ +DV H+DLH KY++ I +L+PGG+AFLS A+ +P GGW RF Q SVGGF F+CP++V ++ + GL R+ + Sbjct: 6 AAGQGSEEPPCVGMEWSDAESLEEIVSDWILPCLSHPPAVKETDGPVPVAVSEGGLVVGEIGCGAGRVARRVLKRSPATLRQLVCFDVSVEMLRHARANLGPLAHRVEGRALNGRETETQARGSDVKEGCCKGEGDRCGGSSSSSECVELLEFFLLDGGGEPSQIPSRFDNSFDFLYAFDVFPHLDLHTVWKYMQRIRDLLRPGGRAFLSLADVTAP----------GGWARFARQRHASVGGFCFLCPEIVECLVRRCGLETERQSR 263
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A7S0ZM83_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZM83_NOCSC) HSP 1 Score: 113 bits (283), Expect = 2.780e-25 Identity = 65/173 (37.57%), Postives = 88/173 (50.87%), Query Frame = 3 Query: 1290 VIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRV 1808 V+ D+I V V EIG GGGRV V V L CFD+S ML+ + D KV P + +S DF+ +DV VH+DLH + + I ++L+PGG F+S AN L+P GW RF Q Y+VGGFYF+ PD+V+ +L K G + Sbjct: 6 VLEDWIFKLVLPNYRVAEIGSGGGRVAARVASRVQHLACFDVSAEMLRAAEKHMSDVPNVSFTKVS----GDADYPVKDDASFDFVYSFDVFVHMDLHQMRRTLGSIYKLLRPGGCCFVSFANLLAP----------KGWRRFARQRHYTVGGFYFVSPDIVKFLLAKCGFTI 164 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1001.120.1 >prot_F-serratus_M_contig1001.120.1 ID=prot_F-serratus_M_contig1001.120.1|Name=mRNA_F-serratus_M_contig1001.120.1|organism=Fucus serratus male|type=polypeptide|length=325bp MSEGGDSVANGAKAKAVVPCDALEGGGTAEEAVRVQAMQDCVDLMTEKSKback to top mRNA from alignment at F-serratus_M_contig1001:15985..21484+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1001.120.1 ID=mRNA_F-serratus_M_contig1001.120.1|Name=mRNA_F-serratus_M_contig1001.120.1|organism=Fucus serratus male|type=mRNA|length=5500bp|location=Sequence derived from alignment at F-serratus_M_contig1001:15985..21484+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1001:15985..21484+ >mRNA_F-serratus_M_contig1001.120.1 ID=mRNA_F-serratus_M_contig1001.120.1|Name=mRNA_F-serratus_M_contig1001.120.1|organism=Fucus serratus male|type=CDS|length=1950bp|location=Sequence derived from alignment at F-serratus_M_contig1001:15985..21484+ (Fucus serratus male)back to top |