mRNA_F-serratus_M_contig1001.120.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A812TK35_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812TK35_9DINO) HSP 1 Score: 210 bits (534), Expect = 1.160e-57 Identity = 114/282 (40.43%), Postives = 159/282 (56.38%), Query Frame = 3 Query: 1050 LMTEKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAG--GSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESN---VGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLL-SKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEK 1877 L+ E + N MV L++ L VY DA N ETNRKLWD YA W + +WVQ+M+G ++ L+ VGDEWS E + V+ D++ P++ E V E+G GGGR+ V +V +L CFD+S+ ML R + + G V++ L+ PEE + DF+ +DV VH+DLH + + + +L+PGG F+S AN L+P GW RF Q KYSVGGFYF+ PD+VR +L AG +VR + N+Y NRD LVL K Sbjct: 38 LVAESEGRQNPMVLELLKDLQKCAVYTDAPNHETNRKLWDAYAQSWSSDVAWVQRMSGHVSREAAALKFVGDEWSDVESLDAVLSDWLYPHLEDEQKLKTVAEVGSGGGRIAARVAPKVERLVCFDVSEGMLARASSRIAE---LGHRHVEFQLVHGGAPYPEEYHTFFDFVYSFDVFVHMDLHQMRQTLHCVRAILRPGGLCFISFANLLAP----------DGWQRFAKQQKYSVGGFYFVSPDIVRCLLTHAGFSLVRMSKPQAGNTYLNRDLLVLARK 306
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A024U9T0_9STRA (Methyltransf_12 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9T0_9STRA) HSP 1 Score: 205 bits (522), Expect = 2.030e-56 Identity = 114/283 (40.28%), Postives = 170/283 (60.07%), Query Frame = 3 Query: 1065 SKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTES---NVGEIGCGGGRVTTEV--FREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPEELSS--SLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDP----SNSYYNRDYLVLVEKP 1880 S+ N +V ++ SL SA+V PD GN E NR++WD YA +W P+A +V M+ + LEV+GDEWSS E++ V+ +F+ P + +VGEIG GGGRV+ + + V + TC DIS ML+R + + A G + ++ LP S +LDF++++DV+VH+DLH + +++ R+LKPGG F+STAN + A GW RF AQ K+++GGFYF+CP MV ++ + G VV+ Q +N Y++RDYLVLV+KP Sbjct: 2 SRTRNALVLDVISSLSSAMVAPDVGNIEGNRRVWDAYAKDWSPSADYVVSMSP-QLTHPLEVLGDEWSSPEDLDEVLLEFVYPFMALSPALLHVGEIGSGGGRVSRRIAAHKSVQKFTCLDISTEMLQRAQKTL-----AHAGLLTEKVVDFRHLPSAWPSPSTLDFVVIFDVMVHMDLHTIYQTLQQTFRLLKPGGYCFMSTANLV----------ASEGWKRFQAQSKFTIGGFYFVCPQMVDFLVAQCGFVVVKTSQAKKVATRANVYFDRDYLVLVQKP 268
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A7S2F3I0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3I0_9STRA) HSP 1 Score: 196 bits (498), Expect = 1.370e-53 Identity = 102/235 (43.40%), Postives = 145/235 (61.70%), Query Frame = 3 Query: 1185 WEPNASWVQKM---AGGSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEKP 1880 W + W+Q M GGS + + VGDEW+ + R++ +FI P V E+ EIG GGGRV V V L C DIS+ ML R + A+ + V ++LL++P P L ++LDFI +DV VH+DLH+ KY+ E+ R+LKPGG+AF+STAN L+P GGW RF Q K++VGGFYF+ P++V ++E++GLR+V G D SN Y +RDYL ++E+P Sbjct: 1 WREDQPWLQSMIDSVGGSGN--ISTVGDEWAPPGHLERIVDEFIRPFVNAETVALEIGSGGGRVARCVAPHVASLCCADISEKMLTRAKVALEESP-----NVTFMLLTRPSFPPRLDATLDFIYAFDVFVHMDLHLLFKYLGEMRRLLKPGGRAFMSTANLLTP----------GGWQRFERQSKFTVGGFYFLSPEIVNSLIERSGLRLVMTGPEDASNVYLSRDYLTVLERP 218
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A812WAU0_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812WAU0_SYMPI) HSP 1 Score: 199 bits (507), Expect = 1.390e-53 Identity = 107/280 (38.21%), Postives = 159/280 (56.79%), Query Frame = 3 Query: 1050 LMTEKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAG--GSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTES-NVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLS-KPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEK 1877 L+ + +++ N MV L++ L VY D N ETNRKLWD YA W N WVQ+M+G +++ L+ +GDEWS E + V+ ++ P++ S V E+G GGGR+ +V +V +L CFD+S+ ML R + + E G V + L+S P++ + S DF+ +DV VH+DLH + + + +L+P G F+S AN L+P GW RF Q YSVGGFYF+ PD+VR +L + G +V + + N Y NRD LV+ K Sbjct: 66 LVAQSAEKQNPMVLELLKGLQKCAVYTDTPNHETNRKLWDAYAQSWSSNVDWVQRMSGHVSRQAEELQFLGDEWSDIESLDAVLSYWLYPHLQDGSLTVAEVGSGGGRIAAKVAPKVQRLVCFDVSEGMLARAKSRIVGE--LGQKHVDFQLISGDAAYPQKYNCSFDFVYSFDVFVHMDLHQMRQSLLCMHSILRPSGLCFVSFANLLAP----------DGWRRFAKQQHYSVGGFYFVSPDIVRCLLRRTGFSLVSISKSEQGNIYLNRDILVIARK 333
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A812S9W3_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812S9W3_9DINO) HSP 1 Score: 197 bits (502), Expect = 1.340e-52 Identity = 104/277 (37.55%), Postives = 154/277 (55.60%), Query Frame = 3 Query: 1050 LMTEKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSK-PRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEK 1877 L+ + ++ N M +++SL VY DA N ETNRKLWD YA W + WV++M+ D L+ +GDEWS E + V+ +++ + V EIG GGGRV V +V +L CFD+S+ ML R + + + G V++ L+ PEE + DF+ +DV VH+DLH + + + +L+PGG F+S AN L+P GW RF Q YSVGGFYF+ PD+V +L++ G ++R + N+Y NRD LV+ K Sbjct: 94 LVAQSEERQNPMALEVLKSLQQCAVYTDAPNHETNRKLWDAYANSWNSDKDWVKRMSKHVSRDDLQCLGDEWSDAESLEAVLHEWLYSYLEGCPKVAEIGSGGGRVAARVAPKVERLVCFDLSEGMLARAKSRIAE---LGHRHVEFQLVQGGTSYPEEYRNCFDFVYSFDVFVHMDLHQMRQTLHCMRSILRPGGLCFISFANLLAP----------DGWRRFAKQRHYSVGGFYFVSPDIVSCLLKQTGFSLIRMSKPQAGNTYLNRDLLVIASK 357
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A8J2SN66_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SN66_9STRA) HSP 1 Score: 196 bits (498), Expect = 7.170e-51 Identity = 114/283 (40.28%), Postives = 160/283 (56.54%), Query Frame = 3 Query: 1038 DCVDLMTEKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKS--DRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAV------------GDEKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVRE-GQHDPSNS 1841 D + + E + +G+EMV +VQ L AL+YPDAGN +TN KLWD YA+EW A WV MA ++ + LE VGDEW+ RV+ ++IL V+ +++ EIG GGGR+ V V +L CFD+S ML + A+ GD A G P+ +S+S F DV+VH+D H + ++ I ++K GKAF+ST+N L+P G+ RF AQ+KYSVGGFYF+ P+ VR ++ +AGLRVVRE D SN+ Sbjct: 4 DTEEYLREAAGRGHEMVQQMVQKLSGALIYPDAGNVQTNEKLWDVYASEWGAEAGWVAGMAASNREAKETLENVGDEWAPAAHTKRVVDEWILSEVSLKTHCCEIGSGGGRIGRMVAPRVSKLQCFDVSAKMLAAAKQALASQENVTFAQIHGDASGADAGFSDKPRHYAPQHKHRISTSYCF----DVMVHMDAHAMFRCLKRIRALVKDEGKAFISTSNLLAP----------DGFRRFEAQEKYSVGGFYFVTPETVRCLVSRAGLRVVRELSAPDASNT 272
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A0G4GG79_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GG79_VITBC) HSP 1 Score: 187 bits (474), Expect = 1.120e-48 Identity = 115/310 (37.10%), Postives = 154/310 (49.68%), Query Frame = 3 Query: 1059 EKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKM----AGGSKSDR----------LEVVGDEWSSREEVLRVIGDFILPNVTTESN--------VGEIGCGGGRVTTEVFREVGQ----------------LTCFDISKNMLKRTRDAVGD--------------------EKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVR 1814 E + GN ++ LVQ+L SA+VY DAGNFETN+KLW+ YA W WVQ+M A GS + + ++G EWS + + ++ +++LP + E + VGEIG GG RV +++ R V + L FDIS MLK+ + A+ D E A V LL P LP + D + DV H+DLH+T Y+ I R LKPGG FLS A+ SP GGW RF Q KYSVGGFYFMC +MV ++ +AGL+VVR Sbjct: 17 ESTSGGNPLLVQLVQTLNSAVVYSDAGNFETNKKLWNEYAKSWRAEQPWVQRMQQQTASGSSQETAADDEHHDLSVPLLGSEWSDTKSLDEIVSNWLLPLFSREQHGGKTSGLTVGEIGVGGARVASKLLRRVPKNRGAVREENGLAAIDTLVAFDISSEMLKKAKQALRDLARVRTGPPFPETSAAAAAAEDDAAMPSVDLHLLDSPDLPPSYTERFDVMYSVDVFPHLDLHVTFTYLTHIRRSLKPGGLCFLSFADLTSP----------GGWSRFARQKKYSVGGFYFMCREMVTTLVGRAGLQVVR 316
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A1Q9CXF6_SYMMI (Putative alpha-1,2-galactosyltransferase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CXF6_SYMMI) HSP 1 Score: 193 bits (491), Expect = 1.880e-48 Identity = 107/275 (38.91%), Postives = 150/275 (54.55%), Query Frame = 3 Query: 1050 LMTEKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAG--GSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESN---VGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLL-SKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRD 1856 L+ E ++ N MV L++ L VY D N ETNRKLWD YA W + +WVQ+M+ ++ L+ VGDEWS E + V+ D++ P++ E V E+G GGGR+ V +V +L CFD+S ML R + + G V++ L+ PEE +S DF+ +DV VH+DLH + + I +L+PGG F+S AN L+P GW RF Q KYSVGGFYF+ PD+VR +L AG +VR + RD Sbjct: 339 LVAESEERQNPMVLELLKDLQKCAVYTDTPNHETNRKLWDAYAQSWSSDVAWVQRMSSHVSREAGALKFVGDEWSDVESLDAVLSDWLYPHLEEEQKLKTVAEVGSGGGRIAARVAPKVERLVCFDVSDGMLARASSRIAE---LGHRHVEFRLVHGGAPYPEEYHTSFDFVYSFDVFVHMDLHQMRQTLHCIRAILRPGGFCFISFANLLAP----------DGWQRFAKQQKYSVGGFYFVSPDIVRCLLTHAGFSLVRMSKPQAGAELSGRD 600
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A812YS80_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YS80_SYMMI) HSP 1 Score: 193 bits (491), Expect = 1.210e-47 Identity = 107/275 (38.91%), Postives = 150/275 (54.55%), Query Frame = 3 Query: 1050 LMTEKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAG--GSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESN---VGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLL-SKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRD 1856 L+ E ++ N MV L++ L VY D N ETNRKLWD YA W + +WVQ+M+ ++ L+ VGDEWS E + V+ D++ P++ E V E+G GGGR+ V +V +L CFD+S ML R + + G V++ L+ PEE +S DF+ +DV VH+DLH + + I +L+PGG F+S AN L+P GW RF Q KYSVGGFYF+ PD+VR +L AG +VR + RD Sbjct: 506 LVAESEERQNPMVLELLKDLQKCAVYTDTPNHETNRKLWDAYAQSWSSDVAWVQRMSSHVSREAGALKFVGDEWSDVESLDAVLSDWLYPHLEEEQKLKTVAEVGSGGGRIAARVAPKVERLVCFDVSDGMLARASSRIAE---LGHRHVEFRLVHGGAPYPEEYHTSFDFVYSFDVFVHMDLHQMRQTLHCIRAILRPGGFCFISFANLLAP----------DGWQRFAKQQKYSVGGFYFVSPDIVRCLLTHAGFSLVRMSKPQAGAELSGRD 767
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: B2J9S5_NOSP7 (Methyltransferase type 12 n=3 Tax=Nostoc TaxID=1177 RepID=B2J9S5_NOSP7) HSP 1 Score: 166 bits (419), Expect = 9.000e-43 Identity = 81/248 (32.66%), Postives = 144/248 (58.06%), Query Frame = 3 Query: 1140 NFETNRKLWDNYAAEWEPNASWV--QKMAGGSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEK 1877 N E N++ W++YA +W+ + + QK+ + + + +GDEW++ E+ + ++ ++I P ++ +S V EIG GGGR+ +V +V ++ CFD+++ MLK+ A+ + ++K+ L+ + E + DF+ +DV VH+DL KY+ I ++LK GGKAF+ T N +P GW RF A + V + PD ++L++EKA +V++E D +N Y +RDYLV+++K Sbjct: 5 NVEINQEFWNDYAKKWDKSQVILGNQKITDDERDNYINYLGDEWATVEDAVNIVSEYITPFISQDSTVAEIGVGGGRIAAKVVEKVKKIYCFDVAEEMLKKAEAALSEYP-----QIKFHLIKNSQFEAEFNEQFDFVYSFDVFVHLDLLTIWKYLNSIYKILKSGGKAFIHTTNITTP----------NGWARFAAYNNDEVL-YQPTSPDAIKLLIEKAQFKVIKESSPDGNNFYSDRDYLVVIQK 236 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1001.120.1 >prot_F-serratus_M_contig1001.120.1 ID=prot_F-serratus_M_contig1001.120.1|Name=mRNA_F-serratus_M_contig1001.120.1|organism=Fucus serratus male|type=polypeptide|length=325bp MSEGGDSVANGAKAKAVVPCDALEGGGTAEEAVRVQAMQDCVDLMTEKSKback to top mRNA from alignment at F-serratus_M_contig1001:15985..21484+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1001.120.1 ID=mRNA_F-serratus_M_contig1001.120.1|Name=mRNA_F-serratus_M_contig1001.120.1|organism=Fucus serratus male|type=mRNA|length=5500bp|location=Sequence derived from alignment at F-serratus_M_contig1001:15985..21484+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1001:15985..21484+ >mRNA_F-serratus_M_contig1001.120.1 ID=mRNA_F-serratus_M_contig1001.120.1|Name=mRNA_F-serratus_M_contig1001.120.1|organism=Fucus serratus male|type=CDS|length=1950bp|location=Sequence derived from alignment at F-serratus_M_contig1001:15985..21484+ (Fucus serratus male)back to top |