mRNA_F-serratus_M_contig1001.120.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1001.120.1
Unique NamemRNA_F-serratus_M_contig1001.120.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A812TK35_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812TK35_9DINO)

HSP 1 Score: 210 bits (534), Expect = 1.160e-57
Identity = 114/282 (40.43%), Postives = 159/282 (56.38%), Query Frame = 3
Query: 1050 LMTEKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAG--GSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESN---VGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLL-SKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEK 1877
            L+ E   + N MV  L++ L    VY DA N ETNRKLWD YA  W  + +WVQ+M+G    ++  L+ VGDEWS  E +  V+ D++ P++  E     V E+G GGGR+   V  +V +L CFD+S+ ML R    + +    G   V++ L+      PEE  +  DF+  +DV VH+DLH   + +  +  +L+PGG  F+S AN L+P           GW RF  Q KYSVGGFYF+ PD+VR +L  AG  +VR  +    N+Y NRD LVL  K
Sbjct:   38 LVAESEGRQNPMVLELLKDLQKCAVYTDAPNHETNRKLWDAYAQSWSSDVAWVQRMSGHVSREAAALKFVGDEWSDVESLDAVLSDWLYPHLEDEQKLKTVAEVGSGGGRIAARVAPKVERLVCFDVSEGMLARASSRIAE---LGHRHVEFQLVHGGAPYPEEYHTFFDFVYSFDVFVHMDLHQMRQTLHCVRAILRPGGLCFISFANLLAP----------DGWQRFAKQQKYSVGGFYFVSPDIVRCLLTHAGFSLVRMSKPQAGNTYLNRDLLVLARK 306          
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A024U9T0_9STRA (Methyltransf_12 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9T0_9STRA)

HSP 1 Score: 205 bits (522), Expect = 2.030e-56
Identity = 114/283 (40.28%), Postives = 170/283 (60.07%), Query Frame = 3
Query: 1065 SKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTES---NVGEIGCGGGRVTTEV--FREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPEELSS--SLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDP----SNSYYNRDYLVLVEKP 1880
            S+  N +V  ++ SL SA+V PD GN E NR++WD YA +W P+A +V  M+    +  LEV+GDEWSS E++  V+ +F+ P +       +VGEIG GGGRV+  +   + V + TC DIS  ML+R +  +     A  G +   ++    LP    S  +LDF++++DV+VH+DLH   + +++  R+LKPGG  F+STAN +          A  GW RF AQ K+++GGFYF+CP MV  ++ + G  VV+  Q       +N Y++RDYLVLV+KP
Sbjct:    2 SRTRNALVLDVISSLSSAMVAPDVGNIEGNRRVWDAYAKDWSPSADYVVSMSP-QLTHPLEVLGDEWSSPEDLDEVLLEFVYPFMALSPALLHVGEIGSGGGRVSRRIAAHKSVQKFTCLDISTEMLQRAQKTL-----AHAGLLTEKVVDFRHLPSAWPSPSTLDFVVIFDVMVHMDLHTIYQTLQQTFRLLKPGGYCFMSTANLV----------ASEGWKRFQAQSKFTIGGFYFVCPQMVDFLVAQCGFVVVKTSQAKKVATRANVYFDRDYLVLVQKP 268          
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A7S2F3I0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3I0_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.370e-53
Identity = 102/235 (43.40%), Postives = 145/235 (61.70%), Query Frame = 3
Query: 1185 WEPNASWVQKM---AGGSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEKP 1880
            W  +  W+Q M    GGS +  +  VGDEW+    + R++ +FI P V  E+   EIG GGGRV   V   V  L C DIS+ ML R + A+ +        V ++LL++P  P  L ++LDFI  +DV VH+DLH+  KY+ E+ R+LKPGG+AF+STAN L+P          GGW RF  Q K++VGGFYF+ P++V  ++E++GLR+V  G  D SN Y +RDYL ++E+P
Sbjct:    1 WREDQPWLQSMIDSVGGSGN--ISTVGDEWAPPGHLERIVDEFIRPFVNAETVALEIGSGGGRVARCVAPHVASLCCADISEKMLTRAKVALEESP-----NVTFMLLTRPSFPPRLDATLDFIYAFDVFVHMDLHLLFKYLGEMRRLLKPGGRAFMSTANLLTP----------GGWQRFERQSKFTVGGFYFLSPEIVNSLIERSGLRLVMTGPEDASNVYLSRDYLTVLERP 218          
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A812WAU0_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812WAU0_SYMPI)

HSP 1 Score: 199 bits (507), Expect = 1.390e-53
Identity = 107/280 (38.21%), Postives = 159/280 (56.79%), Query Frame = 3
Query: 1050 LMTEKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAG--GSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTES-NVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLS-KPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEK 1877
            L+ + +++ N MV  L++ L    VY D  N ETNRKLWD YA  W  N  WVQ+M+G    +++ L+ +GDEWS  E +  V+  ++ P++   S  V E+G GGGR+  +V  +V +L CFD+S+ ML R +  +  E   G   V + L+S     P++ + S DF+  +DV VH+DLH   + +  +  +L+P G  F+S AN L+P           GW RF  Q  YSVGGFYF+ PD+VR +L + G  +V   + +  N Y NRD LV+  K
Sbjct:   66 LVAQSAEKQNPMVLELLKGLQKCAVYTDTPNHETNRKLWDAYAQSWSSNVDWVQRMSGHVSRQAEELQFLGDEWSDIESLDAVLSYWLYPHLQDGSLTVAEVGSGGGRIAAKVAPKVQRLVCFDVSEGMLARAKSRIVGE--LGQKHVDFQLISGDAAYPQKYNCSFDFVYSFDVFVHMDLHQMRQSLLCMHSILRPSGLCFVSFANLLAP----------DGWRRFAKQQHYSVGGFYFVSPDIVRCLLRRTGFSLVSISKSEQGNIYLNRDILVIARK 333          
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A812S9W3_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812S9W3_9DINO)

HSP 1 Score: 197 bits (502), Expect = 1.340e-52
Identity = 104/277 (37.55%), Postives = 154/277 (55.60%), Query Frame = 3
Query: 1050 LMTEKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSK-PRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEK 1877
            L+ +  ++ N M   +++SL    VY DA N ETNRKLWD YA  W  +  WV++M+     D L+ +GDEWS  E +  V+ +++   +     V EIG GGGRV   V  +V +L CFD+S+ ML R +  + +    G   V++ L+      PEE  +  DF+  +DV VH+DLH   + +  +  +L+PGG  F+S AN L+P           GW RF  Q  YSVGGFYF+ PD+V  +L++ G  ++R  +    N+Y NRD LV+  K
Sbjct:   94 LVAQSEERQNPMALEVLKSLQQCAVYTDAPNHETNRKLWDAYANSWNSDKDWVKRMSKHVSRDDLQCLGDEWSDAESLEAVLHEWLYSYLEGCPKVAEIGSGGGRVAARVAPKVERLVCFDLSEGMLARAKSRIAE---LGHRHVEFQLVQGGTSYPEEYRNCFDFVYSFDVFVHMDLHQMRQTLHCMRSILRPGGLCFISFANLLAP----------DGWRRFAKQRHYSVGGFYFVSPDIVSCLLKQTGFSLIRMSKPQAGNTYLNRDLLVIASK 357          
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A8J2SN66_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SN66_9STRA)

HSP 1 Score: 196 bits (498), Expect = 7.170e-51
Identity = 114/283 (40.28%), Postives = 160/283 (56.54%), Query Frame = 3
Query: 1038 DCVDLMTEKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKS--DRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAV------------GDEKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVRE-GQHDPSNS 1841
            D  + + E + +G+EMV  +VQ L  AL+YPDAGN +TN KLWD YA+EW   A WV  MA  ++   + LE VGDEW+      RV+ ++IL  V+ +++  EIG GGGR+   V   V +L CFD+S  ML   + A+            GD   A  G         P+    +S+S  F    DV+VH+D H   + ++ I  ++K  GKAF+ST+N L+P           G+ RF AQ+KYSVGGFYF+ P+ VR ++ +AGLRVVRE    D SN+
Sbjct:    4 DTEEYLREAAGRGHEMVQQMVQKLSGALIYPDAGNVQTNEKLWDVYASEWGAEAGWVAGMAASNREAKETLENVGDEWAPAAHTKRVVDEWILSEVSLKTHCCEIGSGGGRIGRMVAPRVSKLQCFDVSAKMLAAAKQALASQENVTFAQIHGDASGADAGFSDKPRHYAPQHKHRISTSYCF----DVMVHMDAHAMFRCLKRIRALVKDEGKAFISTSNLLAP----------DGFRRFEAQEKYSVGGFYFVTPETVRCLVSRAGLRVVRELSAPDASNT 272          
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A0G4GG79_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GG79_VITBC)

HSP 1 Score: 187 bits (474), Expect = 1.120e-48
Identity = 115/310 (37.10%), Postives = 154/310 (49.68%), Query Frame = 3
Query: 1059 EKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKM----AGGSKSDR----------LEVVGDEWSSREEVLRVIGDFILPNVTTESN--------VGEIGCGGGRVTTEVFREVGQ----------------LTCFDISKNMLKRTRDAVGD--------------------EKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVR 1814
            E +  GN ++  LVQ+L SA+VY DAGNFETN+KLW+ YA  W     WVQ+M    A GS  +           + ++G EWS  + +  ++ +++LP  + E +        VGEIG GG RV +++ R V +                L  FDIS  MLK+ + A+ D                    E  A    V   LL  P LP   +   D +   DV  H+DLH+T  Y+  I R LKPGG  FLS A+  SP          GGW RF  Q KYSVGGFYFMC +MV  ++ +AGL+VVR
Sbjct:   17 ESTSGGNPLLVQLVQTLNSAVVYSDAGNFETNKKLWNEYAKSWRAEQPWVQRMQQQTASGSSQETAADDEHHDLSVPLLGSEWSDTKSLDEIVSNWLLPLFSREQHGGKTSGLTVGEIGVGGARVASKLLRRVPKNRGAVREENGLAAIDTLVAFDISSEMLKKAKQALRDLARVRTGPPFPETSAAAAAAEDDAAMPSVDLHLLDSPDLPPSYTERFDVMYSVDVFPHLDLHVTFTYLTHIRRSLKPGGLCFLSFADLTSP----------GGWSRFARQKKYSVGGFYFMCREMVTTLVGRAGLQVVR 316          
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A1Q9CXF6_SYMMI (Putative alpha-1,2-galactosyltransferase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CXF6_SYMMI)

HSP 1 Score: 193 bits (491), Expect = 1.880e-48
Identity = 107/275 (38.91%), Postives = 150/275 (54.55%), Query Frame = 3
Query: 1050 LMTEKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAG--GSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESN---VGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLL-SKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRD 1856
            L+ E  ++ N MV  L++ L    VY D  N ETNRKLWD YA  W  + +WVQ+M+     ++  L+ VGDEWS  E +  V+ D++ P++  E     V E+G GGGR+   V  +V +L CFD+S  ML R    + +    G   V++ L+      PEE  +S DF+  +DV VH+DLH   + +  I  +L+PGG  F+S AN L+P           GW RF  Q KYSVGGFYF+ PD+VR +L  AG  +VR  +         RD
Sbjct:  339 LVAESEERQNPMVLELLKDLQKCAVYTDTPNHETNRKLWDAYAQSWSSDVAWVQRMSSHVSREAGALKFVGDEWSDVESLDAVLSDWLYPHLEEEQKLKTVAEVGSGGGRIAARVAPKVERLVCFDVSDGMLARASSRIAE---LGHRHVEFRLVHGGAPYPEEYHTSFDFVYSFDVFVHMDLHQMRQTLHCIRAILRPGGFCFISFANLLAP----------DGWQRFAKQQKYSVGGFYFVSPDIVRCLLTHAGFSLVRMSKPQAGAELSGRD 600          
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A812YS80_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YS80_SYMMI)

HSP 1 Score: 193 bits (491), Expect = 1.210e-47
Identity = 107/275 (38.91%), Postives = 150/275 (54.55%), Query Frame = 3
Query: 1050 LMTEKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAG--GSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESN---VGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLL-SKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRD 1856
            L+ E  ++ N MV  L++ L    VY D  N ETNRKLWD YA  W  + +WVQ+M+     ++  L+ VGDEWS  E +  V+ D++ P++  E     V E+G GGGR+   V  +V +L CFD+S  ML R    + +    G   V++ L+      PEE  +S DF+  +DV VH+DLH   + +  I  +L+PGG  F+S AN L+P           GW RF  Q KYSVGGFYF+ PD+VR +L  AG  +VR  +         RD
Sbjct:  506 LVAESEERQNPMVLELLKDLQKCAVYTDTPNHETNRKLWDAYAQSWSSDVAWVQRMSSHVSREAGALKFVGDEWSDVESLDAVLSDWLYPHLEEEQKLKTVAEVGSGGGRIAARVAPKVERLVCFDVSDGMLARASSRIAE---LGHRHVEFRLVHGGAPYPEEYHTSFDFVYSFDVFVHMDLHQMRQTLHCIRAILRPGGFCFISFANLLAP----------DGWQRFAKQQKYSVGGFYFVSPDIVRCLLTHAGFSLVRMSKPQAGAELSGRD 767          
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: B2J9S5_NOSP7 (Methyltransferase type 12 n=3 Tax=Nostoc TaxID=1177 RepID=B2J9S5_NOSP7)

HSP 1 Score: 166 bits (419), Expect = 9.000e-43
Identity = 81/248 (32.66%), Postives = 144/248 (58.06%), Query Frame = 3
Query: 1140 NFETNRKLWDNYAAEWEPNASWV--QKMAGGSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEK 1877
            N E N++ W++YA +W+ +   +  QK+    + + +  +GDEW++ E+ + ++ ++I P ++ +S V EIG GGGR+  +V  +V ++ CFD+++ MLK+   A+ +       ++K+ L+   +   E +   DF+  +DV VH+DL    KY+  I ++LK GGKAF+ T N  +P           GW RF A +   V  +    PD ++L++EKA  +V++E   D +N Y +RDYLV+++K
Sbjct:    5 NVEINQEFWNDYAKKWDKSQVILGNQKITDDERDNYINYLGDEWATVEDAVNIVSEYITPFISQDSTVAEIGVGGGRIAAKVVEKVKKIYCFDVAEEMLKKAEAALSEYP-----QIKFHLIKNSQFEAEFNEQFDFVYSFDVFVHLDLLTIWKYLNSIYKILKSGGKAFIHTTNITTP----------NGWARFAAYNNDEVL-YQPTSPDAIKLLIEKAQFKVIKESSPDGNNFYSDRDYLVVIQK 236          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812TK35_9DINO1.160e-5740.43Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A024U9T0_9STRA2.030e-5640.28Methyltransf_12 domain-containing protein n=1 Tax=... [more]
A0A7S2F3I0_9STRA1.370e-5343.40Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A812WAU0_SYMPI1.390e-5338.21Hypothetical protein n=1 Tax=Symbiodinium pilosum ... [more]
A0A812S9W3_9DINO1.340e-5237.55Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A8J2SN66_9STRA7.170e-5140.28Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0G4GG79_VITBC1.120e-4837.10Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A1Q9CXF6_SYMMI1.880e-4838.91Putative alpha-1,2-galactosyltransferase n=1 Tax=S... [more]
A0A812YS80_SYMMI1.210e-4738.91Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
B2J9S5_NOSP79.000e-4332.66Methyltransferase type 12 n=3 Tax=Nostoc TaxID=117... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1001contigF-serratus_M_contig1001:15985..21484 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score490.7
Seed ortholog evalue5.2e-136
Seed eggNOG ortholog2880.D8LRQ6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Methyltransferase domain
EggNOG OGs2CCND@1,2S208@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons10
Model size2703
Cds size975
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1001.120.1prot_F-serratus_M_contig1001.120.1Fucus serratus malepolypeptideF-serratus_M_contig1001 16905..20659 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928791.4636922-UTR-F-serratus_M_contig1001:15984..169041622928791.4636922-UTR-F-serratus_M_contig1001:15984..16904Fucus serratus maleUTRF-serratus_M_contig1001 15985..16904 +
1690962573.538936-UTR-F-serratus_M_contig1001:15984..169041690962573.538936-UTR-F-serratus_M_contig1001:15984..16904Fucus serratus maleUTRF-serratus_M_contig1001 15985..16904 +
1622928791.6305215-UTR-F-serratus_M_contig1001:20659..213311622928791.6305215-UTR-F-serratus_M_contig1001:20659..21331Fucus serratus maleUTRF-serratus_M_contig1001 20660..21331 +
1690962573.632329-UTR-F-serratus_M_contig1001:20659..213311690962573.632329-UTR-F-serratus_M_contig1001:20659..21331Fucus serratus maleUTRF-serratus_M_contig1001 20660..21331 +
1622928791.6429563-UTR-F-serratus_M_contig1001:21348..214841622928791.6429563-UTR-F-serratus_M_contig1001:21348..21484Fucus serratus maleUTRF-serratus_M_contig1001 21349..21484 +
1690962573.6423824-UTR-F-serratus_M_contig1001:21348..214841690962573.6423824-UTR-F-serratus_M_contig1001:21348..21484Fucus serratus maleUTRF-serratus_M_contig1001 21349..21484 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928791.4758203-CDS-F-serratus_M_contig1001:16904..170211622928791.4758203-CDS-F-serratus_M_contig1001:16904..17021Fucus serratus maleCDSF-serratus_M_contig1001 16905..17021 +
1690962573.549886-CDS-F-serratus_M_contig1001:16904..170211690962573.549886-CDS-F-serratus_M_contig1001:16904..17021Fucus serratus maleCDSF-serratus_M_contig1001 16905..17021 +
1622928791.4877763-CDS-F-serratus_M_contig1001:17193..173571622928791.4877763-CDS-F-serratus_M_contig1001:17193..17357Fucus serratus maleCDSF-serratus_M_contig1001 17194..17357 +
1690962573.5584598-CDS-F-serratus_M_contig1001:17193..173571690962573.5584598-CDS-F-serratus_M_contig1001:17193..17357Fucus serratus maleCDSF-serratus_M_contig1001 17194..17357 +
1622928791.5117223-CDS-F-serratus_M_contig1001:17607..177161622928791.5117223-CDS-F-serratus_M_contig1001:17607..17716Fucus serratus maleCDSF-serratus_M_contig1001 17608..17716 +
1690962573.5686133-CDS-F-serratus_M_contig1001:17607..177161690962573.5686133-CDS-F-serratus_M_contig1001:17607..17716Fucus serratus maleCDSF-serratus_M_contig1001 17608..17716 +
1622928791.5283964-CDS-F-serratus_M_contig1001:18042..181081622928791.5283964-CDS-F-serratus_M_contig1001:18042..18108Fucus serratus maleCDSF-serratus_M_contig1001 18043..18108 +
1690962573.5785432-CDS-F-serratus_M_contig1001:18042..181081690962573.5785432-CDS-F-serratus_M_contig1001:18042..18108Fucus serratus maleCDSF-serratus_M_contig1001 18043..18108 +
1622928791.5456107-CDS-F-serratus_M_contig1001:18580..186851622928791.5456107-CDS-F-serratus_M_contig1001:18580..18685Fucus serratus maleCDSF-serratus_M_contig1001 18581..18685 +
1690962573.5872078-CDS-F-serratus_M_contig1001:18580..186851690962573.5872078-CDS-F-serratus_M_contig1001:18580..18685Fucus serratus maleCDSF-serratus_M_contig1001 18581..18685 +
1622928791.563388-CDS-F-serratus_M_contig1001:19079..192991622928791.563388-CDS-F-serratus_M_contig1001:19079..19299Fucus serratus maleCDSF-serratus_M_contig1001 19080..19299 +
1690962573.5977774-CDS-F-serratus_M_contig1001:19079..192991690962573.5977774-CDS-F-serratus_M_contig1001:19079..19299Fucus serratus maleCDSF-serratus_M_contig1001 19080..19299 +
1622928791.5785186-CDS-F-serratus_M_contig1001:19493..195471622928791.5785186-CDS-F-serratus_M_contig1001:19493..19547Fucus serratus maleCDSF-serratus_M_contig1001 19494..19547 +
1690962573.606544-CDS-F-serratus_M_contig1001:19493..195471690962573.606544-CDS-F-serratus_M_contig1001:19493..19547Fucus serratus maleCDSF-serratus_M_contig1001 19494..19547 +
1622928791.5936549-CDS-F-serratus_M_contig1001:20007..201041622928791.5936549-CDS-F-serratus_M_contig1001:20007..20104Fucus serratus maleCDSF-serratus_M_contig1001 20008..20104 +
1690962573.615746-CDS-F-serratus_M_contig1001:20007..201041690962573.615746-CDS-F-serratus_M_contig1001:20007..20104Fucus serratus maleCDSF-serratus_M_contig1001 20008..20104 +
1622928791.616414-CDS-F-serratus_M_contig1001:20616..206591622928791.616414-CDS-F-serratus_M_contig1001:20616..20659Fucus serratus maleCDSF-serratus_M_contig1001 20617..20659 +
1690962573.6237462-CDS-F-serratus_M_contig1001:20616..206591690962573.6237462-CDS-F-serratus_M_contig1001:20616..20659Fucus serratus maleCDSF-serratus_M_contig1001 20617..20659 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1001.120.1

>prot_F-serratus_M_contig1001.120.1 ID=prot_F-serratus_M_contig1001.120.1|Name=mRNA_F-serratus_M_contig1001.120.1|organism=Fucus serratus male|type=polypeptide|length=325bp
MSEGGDSVANGAKAKAVVPCDALEGGGTAEEAVRVQAMQDCVDLMTEKSK
QGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMA
GGSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVT
TEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPE
ELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSP
GKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREG
QHDPSNSYYNRDYLVLVEKPEAIS*
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mRNA from alignment at F-serratus_M_contig1001:15985..21484+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1001.120.1 ID=mRNA_F-serratus_M_contig1001.120.1|Name=mRNA_F-serratus_M_contig1001.120.1|organism=Fucus serratus male|type=mRNA|length=5500bp|location=Sequence derived from alignment at F-serratus_M_contig1001:15985..21484+ (Fucus serratus male)
TTCAAGGATAAGAAAAGGACCTCCTGTGGCGACAAGGTACGCCTGCCCTT CCAGGCTATACTTTGTATGTTGACGCGTTTAAAGCAAGTGGGCTTCGAGC TCAGCAGATTCCATACTTAATGCTTGAGTATGAAGTGAACATCGACCCGA GCTGTCTACGAATTTACTTGTAGAGCTGCTGATCAAGGCAATCGGCACCT GTAGTATATGTATCAATACTCTGCTGTATACAAATTGCTCCAACATCCCA TTTATTATGGACGTCAGACTCGTGGACGCACCAACCGGGGTCGCACAGGA GGAAGGTCGCACAGGATTTCCCAACCTGCCTTCCGGTACTTGCCTTAATT TTTATCTCGAGAAGGATTCAGCCGCCCCTTTCCCTCGTCGACCGTAAAGT CGGATTTTGTGTACCCACATTTGGTCACTCGGCTAGTTTTTCCAGAGGAC GTGTACCTGGTACAATTTAGTGTGCTCTTGAGATCATTTGCTACGCTTGC CCAGGCTGTTACTACTGTATAAACAAACTCTTGTTGAAACACTCGGTTTA GCAACACAGGGTTTTTGCCAATGACTGTTGTACATAACATTTAGAAACAA TCTCCACAAGCGCTCACTATTAACGGAACCAGATTCAGCCTGGCTGCGTG AAGAATGAGCGGGCTGACGCGGGACGTGATGGCCAAACTCGTCTAGCGGG AGCAAATTCTGAGGCGCGAACGGGGACAGGGATAATGAAAACAACCATGT ACAATTGGCAACCATATTACTGTACCAGTCGATGCCCAGTCCTGCGAACG TGATCACCACACATACATACATAAAGGATAGTACTTATGTATGTACTTTT GTGCATAACGTGGCGGTCAGGCACACAACTCGAGAACAAGAAAATAAAAA GCTGAAGCAATCAAGGGATCATGTCAGAGGGAGGGGATAGCGTCGCAAAC GGGGCAAAGGCGAAGGCGGTTGTGCCATGCGATGCATTAGAGGGCGGAGG AACAGCTGAGGAGGCCGTCCGCGTGCAAGCTATGCAGGTGATAACGCACA ACAGTACTGCCAGGTATACTACTATTTTGGCAATCTCATCTTTCTTTTCC CTCCATCTTAGTTTGTACTACAGCAGTATTCATAGCATTCAAGTTCACTC TCGTCAAACTCTCCCGGCCGGTGCGGATGCTTGTCCACCATCGACAATGG TTGCGCCAGGATTGTGTCGACCTGATGACGGAGAAATCCAAGCAAGGCAA CGAGATGGTGGCCGGCCTCGTTCAAAGCCTCGGGTCCGCGCTCGTCTACC CTGACGCGGGTAACTTTGAGACGAACCGTAAGCTGTGGGACAACTACGCG GCGGAGTGGGAGCCAAACGCCAGGTGAAGAGGGTGAGGGTGAGGGTGTCT GTCACCCCTTACCTCCCTTTCACGCCTCGGTGGAACGTCAGCGTTGTGCG GTTCGGTACCGATTTGATCGGCCATGTTCTATTATAGTCGGTTACTCTTT GTACGCATTTGTTGTCTCCGAGTTTTCCGAGCATGCTCTGAACGCCATGT CACCGGGTCCCTTGTCTTTACGCTTGCTTCGCACCCCCTCCCTTCCTGCT CTGGTGGGAGACGTTGACCGCAGCTGGGTGCAAAAGATGGCCGGAGGTTC GAAGTCAGACCGCTTGGAAGTGGTGGGCGATGAGTGGTCCAGTCGGGAAG AAGTGCTGAGAGTCATCGGCGACTTCATACTGGTAAAGCGCGCGACGGGG ACGTGCCGCACGTACAGCAGATATAGCCAAGCACGTTTCAGGCAGCAGAT TCCCCAGCGAAGCGTCTTCGGGTCGCTGAAATAAGCGTTCCGTGTGATTC CGTTGACAAAAAATTGGTGGAGTATTGGCATGCCACAGCTCACGACGCTG ATCCTGTGCCGTCACCGCGATGTTGCTCGTTGTGGTCCCTGATTCTTTTT CTCCTTCGTGAGGCCTCGTCATCTGCAACTTTCTTGATCGTTCATACCAA CCCCTCCAATGCCACCCTTCTGTCCTACTCCGTTGTACGGCACTGTATGG TGCTACAGCCGAATGTGACCACGGAGAGCAACGTTGGGGAGATCGGCTGC GGGGGCGGACGCGTCACGACCGAGGTGCCCTCTGCGCCTCCGTGCTGTCT TTAATCGTGTGACTGAGCTGTTCAGACTTGCTGTTGCCTGTTATCGAAGA CCTATTTTACGTTCTCTATCTCGGGCGAGATTCGAAATCCGCCCCGCAGT AGCGCTTTCGCCTCTCGCCGCGACTTCTCCGAGTGATTTGACACAGCAGT GTGCGCTTCGCTCCGTCTTCGTCTTCTCTCTCGTCACCTCGGATAATTTT TTCATTGCAGCCTTTGACCCCGCCTAAACGTTTTGACAtTTTCTTCCCCC TAAACGAGGGATGCTCAAAAAGTCTAGATGCTGTTCTGATTTTTCTTTAA ACAGGGATTATTACTGCTGGAAATGCGATTCTATCTGCGAAACCCAATAC ACTGTAGTCGATCTAAAATAGTATCATGAACAGGACGCATTCGCGCTTGC CTCCCTACCACCTACACCAACAGCCGTTTGTTTCATTTGGCGCCAGGTTT TCCGCGAAGTGGGTCAGCTGACGTGCTTCGACATCTCCAAGAACATGTTG AAGCGCACGAGGGATGCGGTCGGAGACGAGAAGTGCGCTGGAGGAGGAAA AGTGTGAACACCCCATTCGACTTGATGCTCCTCCTCATCTGCCCTATTGT CCCCGTTGCGCCCGCAAGGCATCATAACCACACCACCTGCGCAATCCGAA GGAGCCCCGCCCCCACGCCGTTCCATGCGTCCCCTTGCATCTCTCTCGCG ATGTCGTACGTTACATCATCTCGCGAAACGGTGAACATCGAACAGCAAAA AGCGAGTAGCTCCTCATCGAATGCTTTAATGGGGGGGGGGTACGACTTCG AACCTACACGTGCACCACGAATACGCTCCCCAGACTGTTTCTTGTCTCCG ATGGGATCGGTGGTAAAAAGCGCACTATAGCATCCATGCCCCGGTCGATC ACACTGTGACTCTGCCCTTTTGATGTCTACTGCACCTCAGCGCAGGTCAA GTATGTGCTGCTCAGCAAGCCCCGGTTGCCGGAGGAGTTGTCAAGCTCGC TCGACTTCATCATCCTTTACGATGTATTGGTGCACGTGGATCTGCACATT ACCAACAAGTACGTGCGGGAGATCGCGAGGGTTCTCAAGCCGGGCGGCAA GGCATTTTTATCCACAGCCAACTTCCTTAGCCCAGGCAAGAGGCTTATGG TCGGCAGAGCTCATGGTCGCAGAGCCTACTGCGCGGTGGGATGCCCGAGC CCTTACCCCCCTTGAACTAACTCTTGTTTCGAAGACTTTTATTTACGTAA TTTGGATCCCCTACTACGAGCAAGGAGAGGCCGCTGGACGGTAACGGTTG GCATGGCATGACGTGACGTGATCTTATCCTCTCTTTTCTTGGCCTCATCC CCACCCCAGGCGGATGGGATCGCTTCATCGCGCAGGACAAGTATAGCGTC GGAGGGTTCTACTGTGAGTGTCTCGAAGTTCAGATTGTTCCCCTCCACAC ACACAAGAAGGTTTAACTAAACACCTACCTGGTGCGTTGGTTTGCATATT TTTGTACTTGATTTGAGACGTGGCCACTTTTAATACCAGATTTTGTAAGT AGTAAGCGCTGGATAGTCTTGCACTCGGTAGGTTTCGTTGTCCGCGCCAA ACCAGCCCGATCCTAACGTGGGGGGGGCTTCTCTGCCTCGACATGCGTCT GAATCGTTGTCAGTTCGATTCTGTTGTTTAGTGGAGCTGTCGTTGATCGA TCGGTCCCTCGCTGTGTCCCAACTTGAAGAAAGTATTCCGTGTTTGTTTT TTTTCTTATATCTGGGGGATACAAGGTTCTTCCCTTCTCGTAACTGCATA TGTTTTAGTTTTCGTTTCGTTTTCGTGCGTGTTTGTTTTTTTCCAACTTT TGTTTTTTCGCGCCTAATAAAAGTCATGTGCCCGGACATGGTGCGGCTGA TGCTCGAAAAGGCGGGTCTGAGGGTAGTCAGAGAAGGGCAGCACGATCCC TCCAACTCCTACTACAACAGGTGAGAGACGAGCCAGTCTCCAGTTTTCTG CACTCTCTCGACAGTGAGAATTGGTGAGCCCCTTATCTTAATTGCCAGTG CAGCACGAAACACGAACTAGTTATGCAACTGCTGTGTCTCCATTACTGTA CCTTCTGGCTGGCGTTGAGGGTCCTTCTTCGCCCTTTCAGGAAACTCAGT CCTGTCTTAGGCTATATTTATTATTTATTTTGTATTTCAACTGTTAATAT CTGCCGTAGATTAGTCTAGAGAGGCACGGCAAAAATGCCCTCTCTGTTTA TCTCGAGGAGACTTGGTTCAACCATGTGCTATGTTTGCCCATTAACTATG GTATGTGTACTGTAAAGAGACATCGCACAAATCCCCACTCTGTTGTACTG TACTGTACTGTACTGTACTGTAGCCTCGAGCCGCCGCGTCGAGTTGCTGC ACGTTTCTTAATACAAGAAGTTCAAGAGCCAAGGGACCGACCGCACCGTT AAGCCGCGATGATTTCGATAACGCGTTCGCAGGGACTACTTGGTGCTCGT GGAGAAGCCGGAAGCAATATCGTAAATTGTAATTTGTCACTAGCAACGCC ACTTCATGGCTGAGCGCCCTGATATCCGTCTTAAGACTGCCGCAGGGAAA GTTGACCTTGTACAGGGCGTAGTCATCTACTTTAATTTGCAGATAGAATT GTACGATCGTATTTCGTTTGCGGGTTTTTCTGCTCGGAAAGGTCAAGGTA CGCGGTGCTTTGGGGGAAGAGTCCGAGGACTGAAACACGCACACAATTTT TAAATTTTGGCAGGGAAGCGCGCGATGAAGGCTGCAGGTTTGAGGCGATG GCTGCTCGGCGGTCTATTGGGCGTTTACATTCGTGCGTTGGGCGTTGAAA TTGCGATTGTTCTCTGCGCTTCGATTATGAACCGTGACGACATGCACATT CTTCAAACCCGCCGGGAATCTTCCCGAGGAGTGGAGAATGCACATTCTTG TCATACCCCGCTGAGAGCTTTCCCAAGGAGACGCACTCGGGGGCTCTAAA CTTTACCCGCTTCTCTTGTCCCCGTGTTTTGACTCGAAAGTACGATAGGC CACGACTCGCTTTGGGGCATCACAGCGGCGATGTTGCTTTGCATGTATGT ATGTATGTATTGATATGGACTGCATGGGTTGGATGCGGACGGAAATCTGC GTCCGAGACGCTTTCGTTGTTAGCACGTTCCCACCTTGTCCAGCGTACAA TGGTACAATATAACTAACATAAAACATACAAAGTAGTACCTCTAGTCTAT AACAGCCCCATGCTAGAAGGAGTTTCGAACTTTCAACCTTTCACGACCTG CTCTGCTGTGCCTAAGACGACTTTTTTTTTCCAACTTATTACGAGCACTA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1001:15985..21484+

>mRNA_F-serratus_M_contig1001.120.1 ID=mRNA_F-serratus_M_contig1001.120.1|Name=mRNA_F-serratus_M_contig1001.120.1|organism=Fucus serratus male|type=CDS|length=1950bp|location=Sequence derived from alignment at F-serratus_M_contig1001:15985..21484+ (Fucus serratus male)
ATGTCAGAGGGAGGGGATAGCGTCGCAAACGGGGCAAAGGCGAAGGCGGT
TGTGCCATGCGATGCATTAGAGGGCGGAGGAACAGCTGAGGAGGCCGTCC
GCGTGCAAGCTATGCAGATGTCAGAGGGAGGGGATAGCGTCGCAAACGGG
GCAAAGGCGAAGGCGGTTGTGCCATGCGATGCATTAGAGGGCGGAGGAAC
AGCTGAGGAGGCCGTCCGCGTGCAAGCTATGCAGGATTGTGTCGACCTGA
TGACGGAGAAATCCAAGCAAGGCAACGAGATGGTGGCCGGCCTCGTTCAA
AGCCTCGGGTCCGCGCTCGTCTACCCTGACGCGGGTAACTTTGAGACGAA
CCGTAAGCTGTGGGACAACTACGCGGCGGAGTGGGAGCCAAACGCCAGGA
TTGTGTCGACCTGATGACGGAGAAATCCAAGCAAGGCAACGAGATGGTGG
CCGGCCTCGTTCAAAGCCTCGGGTCCGCGCTCGTCTACCCTGACGCGGGT
AACTTTGAGACGAACCGTAAGCTGTGGGACAACTACGCGGCGGAGTGGGA
GCCAAACGCCAGCTGGGTGCAAAAGATGGCCGGAGGTTCGAAGTCAGACC
GCTTGGAAGTGGTGGGCGATGAGTGGTCCAGTCGGGAAGAAGTGCTGAGA
GTCATCGGCGACTTCATACTGCTGGGTGCAAAAGATGGCCGGAGGTTCGA
AGTCAGACCGCTTGGAAGTGGTGGGCGATGAGTGGTCCAGTCGGGAAGAA
GTGCTGAGAGTCATCGGCGACTTCATACTGCCGAATGTGACCACGGAGAG
CAACGTTGGGGAGATCGGCTGCGGGGGCGGACGCGTCACGACCGAGCCGA
ATGTGACCACGGAGAGCAACGTTGGGGAGATCGGCTGCGGGGGCGGACGC
GTCACGACCGAGGTTTTCCGCGAAGTGGGTCAGCTGACGTGCTTCGACAT
CTCCAAGAACATGTTGAAGCGCACGAGGGATGCGGTCGGAGACGAGAAGT
GCGCTGGAGGAGGAAAAGTTTTCCGCGAAGTGGGTCAGCTGACGTGCTTC
GACATCTCCAAGAACATGTTGAAGCGCACGAGGGATGCGGTCGGAGACGA
GAAGTGCGCTGGAGGAGGAAAAGTCAAGTATGTGCTGCTCAGCAAGCCCC
GGTTGCCGGAGGAGTTGTCAAGCTCGCTCGACTTCATCATCCTTTACGAT
GTATTGGTGCACGTGGATCTGCACATTACCAACAAGTACGTGCGGGAGAT
CGCGAGGGTTCTCAAGCCGGGCGGCAAGGCATTTTTATCCACAGCCAACT
TCCTTAGCCCAGGCAAGAGGCTTATGGTCGGCAGAGCTCATGGTCAAGTA
TGTGCTGCTCAGCAAGCCCCGGTTGCCGGAGGAGTTGTCAAGCTCGCTCG
ACTTCATCATCCTTTACGATGTATTGGTGCACGTGGATCTGCACATTACC
AACAAGTACGTGCGGGAGATCGCGAGGGTTCTCAAGCCGGGCGGCAAGGC
ATTTTTATCCACAGCCAACTTCCTTAGCCCAGGCAAGAGGCTTATGGTCG
GCAGAGCTCATGGCGGATGGGATCGCTTCATCGCGCAGGACAAGTATAGC
GTCGGAGGGTTCTACTGCGGATGGGATCGCTTCATCGCGCAGGACAAGTA
TAGCGTCGGAGGGTTCTACTTCATGTGCCCGGACATGGTGCGGCTGATGC
TCGAAAAGGCGGGTCTGAGGGTAGTCAGAGAAGGGCAGCACGATCCCTCC
AACTCCTACTACAACAGTCATGTGCCCGGACATGGTGCGGCTGATGCTCG
AAAAGGCGGGTCTGAGGGTAGTCAGAGAAGGGCAGCACGATCCCTCCAAC
TCCTACTACAACAGGGACTACTTGGTGCTCGTGGAGAAGCCGGAAGCAAT
ATCGTAAGGACTACTTGGTGCTCGTGGAGAAGCCGGAAGCAATATCGTAA
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