mRNA_F-serratus_M_contig10.90.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig10.90.1
Unique NamemRNA_F-serratus_M_contig10.90.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig10.90.1 vs. uniprot
Match: D7FJC7_ECTSI (Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJC7_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 2.170e-119
Identity = 181/202 (89.60%), Postives = 185/202 (91.58%), Query Frame = 1 
Query:  556 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARYERWCESFSGAKSWVKELQRRGDQNVIIALAGNKADLEHRRQVQFDEAHQYAADNGLIHMETSAKSALNVKKIFVEIAQKLPKATTQPEREAFPIMPPRQEKKSGCC 1161
            M+SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK       ESF+GAKSWVKELQRRGD NVIIALAGNKADLEHRRQVQ +EA  YA DNGLIHMETSAKSA NVK IFVEIAQKLPKAT QPEREAFPIM PR E+KSGCC
Sbjct:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK-------ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC 195
[Close]
BLAST of mRNA_F-serratus_M_contig10.90.1 vs. uniprot
Match: A0A835Z7I1_9STRA (Rab5, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I1_9STRA)

HSP 1 Score: 332 bits (852), Expect = 9.140e-111
Identity = 167/198 (84.34%), Postives = 180/198 (90.91%), Query Frame = 1 
Query:  568 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARYERWCESFSGAKSWVKELQRRGDQNVIIALAGNKADLEHRRQVQFDEAHQYAADNGLIHMETSAKSALNVKKIFVEIAQKLPKATTQPEREAFPIMPPRQEKKSGCC 1161
            RVCHFKLVLLGDTAVGKSCLVVRFVR+EFFE+QEPTIGAAFLTQ V LDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK       +SF+GAKSWVKELQRRGD NV+IALAGNKADLE RRQV F+EAH YA +NG+IHMETSAKSALNVK IFVEIA++LPKA  QPEREAFPIMPPR++KK+G C
Sbjct:    3 RVCHFKLVLLGDTAVGKSCLVVRFVRNEFFEFQEPTIGAAFLTQTVGLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK-------DSFNGAKSWVKELQRRGDPNVVIALAGNKADLEGRRQVHFEEAHAYAEENGIIHMETSAKSALNVKSIFVEIAKRLPKAGAQPEREAFPIMPPRRDKKAGGC 193
[Close]
BLAST of mRNA_F-serratus_M_contig10.90.1 vs. uniprot
Match: A0A6V1MPB5_HETAK (Hypothetical protein n=2 Tax=Chattonellaceae TaxID=658124 RepID=A0A6V1MPB5_HETAK)

HSP 1 Score: 321 bits (823), Expect = 2.260e-106
Identity = 164/202 (81.19%), Postives = 178/202 (88.12%), Query Frame = 1 
Query:  556 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARYERWCESFSGAKSWVKELQRRGDQNVIIALAGNKADLEHRRQVQFDEAHQYAADNGLIHMETSAKSALNVKKIFVEIAQKLPKATTQPEREAFPIMPPRQEKKSGCC 1161
            MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQ V L +ATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK       +SF+GAKSWVKELQRRGD NV+IALAGNK DLE RRQV F+EA  YAA+NG+IHMETSAKSA NV++IF++IA+KLPK   Q ERE FPIMPP++E K GCC
Sbjct:    1 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQTVSLPEATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK-------DSFNGAKSWVKELQRRGDPNVVIALAGNKCDLEPRRQVPFEEAAAYAAENGIIHMETSAKSAHNVQQIFLDIAKKLPKNPPQVEREVFPIMPPKRESK-GCC 194
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BLAST of mRNA_F-serratus_M_contig10.90.1 vs. uniprot
Match: A0A5D6XMY9_9STRA (Uncharacterized protein n=23 Tax=Oomycota TaxID=4762 RepID=A0A5D6XMY9_9STRA)

HSP 1 Score: 318 bits (815), Expect = 4.220e-105
Identity = 162/205 (79.02%), Postives = 178/205 (86.83%), Query Frame = 1 
Query:  556 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDA-TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARYERWCESFSGAKSWVKELQRRGDQNVIIALAGNKADLEHRRQVQFDEAHQYAADNGLIHMETSAKSALNVKKIFVEIAQKLPKATTQPEREAFPIMPPRQEK--KSGCC 1161
            MA G+ CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDD  TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK       +SF+GAKSWVKELQRRGD NV+IALAGNKADLE RR+V+F+EAHQYA DN ++HMETSAK+A+NVK +FV IA++LPK   QPEREAFPI PP  +K  KSGCC
Sbjct:    1 MAQGKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLDDGLTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK-------DSFTGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPHQPEREAFPITPPTNQKQNKSGCC 198
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BLAST of mRNA_F-serratus_M_contig10.90.1 vs. uniprot
Match: B8BUG2_THAPS (Canine-like rab-type small G protein n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BUG2_THAPS)

HSP 1 Score: 318 bits (814), Expect = 5.020e-105
Identity = 158/200 (79.00%), Postives = 179/200 (89.50%), Query Frame = 1 
Query:  562 SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARYERWCESFSGAKSWVKELQRRGDQNVIIALAGNKADLEHRRQVQFDEAHQYAADNGLIHMETSAKSALNVKKIFVEIAQKLPKATTQPEREAFPIMPPRQEKKSGCC 1161
            S RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYD+TN        +SF+GAKSWVKELQRRGDQ+V+IA+AGNKADLE RRQV F+EA+ YA +NG++HMETSAK+A NVK +FVEIA++LPK+T QP+REAFPIMP +QE ++ CC
Sbjct:    2 SNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNP-------DSFAGAKSWVKELQRRGDQDVVIAMAGNKADLEARRQVDFEEANAYAEENGILHMETSAKNANNVKALFVEIARRLPKSTQQPDREAFPIMPQKQESRN-CC 193
[Close]
BLAST of mRNA_F-serratus_M_contig10.90.1 vs. uniprot
Match: F0YJN1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJN1_AURAN)

HSP 1 Score: 316 bits (809), Expect = 3.080e-104
Identity = 155/202 (76.73%), Postives = 178/202 (88.12%), Query Frame = 1 
Query:  556 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARYERWCESFSGAKSWVKELQRRGDQNVIIALAGNKADLEHRRQVQFDEAHQYAADNGLIHMETSAKSALNVKKIFVEIAQKLPKATTQPEREAFPIMPPRQEKKSGCC 1161
            MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L++ATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYD+TNK       ESF+GAKSWVKELQRRGD NVIIALAGNKADL+++R+V+ +EA QY+ +NG++HMETSAK+A +VK +F EIA+KLPK   QPER+AFPI+PP+  +   CC
Sbjct:    1 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQSVNLENATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNK-------ESFNGAKSWVKELQRRGDPNVIIALAGNKADLQNKRRVESEEAKQYSEENGILHMETSAKNATHVKDLFQEIARKLPKTPPQPERDAFPIIPPKHNENKVCC 195
[Close]
BLAST of mRNA_F-serratus_M_contig10.90.1 vs. uniprot
Match: M4B2C3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2C3_HYAAE)

HSP 1 Score: 319 bits (817), Expect = 3.220e-103
Identity = 162/205 (79.02%), Postives = 179/205 (87.32%), Query Frame = 1 
Query:  553 RMASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDA-TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARYERWCESFSGAKSWVKELQRRGDQNVIIALAGNKADLEHRRQVQFDEAHQYAADNGLIHMETSAKSALNVKKIFVEIAQKLPKATTQPEREAFPIMPPRQEK-KSGCC 1161
            +M+ G+ CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L+D  TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK       ESFSGAKSWVKELQRRGD NV+IALAGNKADLE RR+V+F+EAHQYA DN ++HMETSAK+A+NVK +FV IA++LPK   QPEREAFPI PP+  K KSGCC
Sbjct:  149 KMSQGKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLEDGLTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK-------ESFSGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPIQPEREAFPITPPQASKSKSGCC 346
[Close]
BLAST of mRNA_F-serratus_M_contig10.90.1 vs. uniprot
Match: A0A7S1ZIQ9_TRICV (Hypothetical protein n=3 Tax=Mediophyceae TaxID=589449 RepID=A0A7S1ZIQ9_TRICV)

HSP 1 Score: 314 bits (805), Expect = 5.140e-103
Identity = 156/200 (78.00%), Postives = 177/200 (88.50%), Query Frame = 1 
Query:  562 SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARYERWCESFSGAKSWVKELQRRGDQNVIIALAGNKADLEHRRQVQFDEAHQYAADNGLIHMETSAKSALNVKKIFVEIAQKLPKATTQPEREAFPIMPPRQEKKSGCC 1161
            S RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LD+ATVKFEIWDTAGQERYRSLAPMYYRGAAAAI+VYD+TN        +SF+GAKSWVKELQRRGD NV+IALAGNKADLE RR+V+F+EA+ YA +NG++H+ETSAK+A NVK +FVEIA+KLPK   QPEREAFPI+ P+QE +S CC
Sbjct:   45 SNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDEATVKFEIWDTAGQERYRSLAPMYYRGAAAAIIVYDITNP-------DSFAGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVEFEEANAYAEENGILHLETSAKNASNVKALFVEIAKKLPKTPPQPEREAFPIVTPKQENRS-CC 236
[Close]
BLAST of mRNA_F-serratus_M_contig10.90.1 vs. uniprot
Match: A0A1Z5KAE2_FISSO (Ras-related protein Rab-5C n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KAE2_FISSO)

HSP 1 Score: 311 bits (798), Expect = 1.880e-102
Identity = 158/201 (78.61%), Postives = 177/201 (88.06%), Query Frame = 1 
Query:  559 ASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARYERWCESFSGAKSWVKELQRRGDQNVIIALAGNKADLEHRRQVQFDEAHQYAADNGLIHMETSAKSALNVKKIFVEIAQKLPKATTQPEREAFPIMPPRQEKKSGCC 1161
            A+ RV HFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ VQLDDA VKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYD+TN        +SF+GAKSWVKELQRRGD NV+IALAGNKADLE RR+V+F+EA  YAA+NGL+H+ETSAK++ NVK +FVEIA+KLPK   QPEREAFPIMP +Q +K GCC
Sbjct:   11 AASRVHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDDAMVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNP-------DSFAGAKSWVKELQRRGDPNVVIALAGNKADLEGRRKVEFEEAAAYAAENGLLHLETSAKNSNNVKALFVEIAKKLPKNPPQPEREAFPIMP-QQPEKQGCC 203
[Close]
BLAST of mRNA_F-serratus_M_contig10.90.1 vs. uniprot
Match: T0Q598_SAPDV (Ras-like protein Rab-5A n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q598_SAPDV)

HSP 1 Score: 311 bits (797), Expect = 2.090e-102
Identity = 159/203 (78.33%), Postives = 173/203 (85.22%), Query Frame = 1 
Query:  556 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDA-TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARYERWCESFSGAKSWVKELQRRGDQNVIIALAGNKADLEHRRQVQFDEAHQYAADNGLIHMETSAKSALNVKKIFVEIAQKLPKATTQPEREAFPIMPPRQEKKSGCC 1161
            MAS + CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDD  TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK       +SF+GAKSWVKELQRRGD NVIIALAGNKADLE RR+V  +EA QYA +N ++HMETSAK+A+NVK +FV IAQKLPK   QPER+AFPI P    KK+GCC
Sbjct:    1 MASNKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVSLDDGMTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK-------DSFTGAKSWVKELQRRGDPNVIIALAGNKADLEARRKVDLEEARQYAEENEILHMETSAKTAVNVKDLFVAIAQKLPKNPQQPERDAFPITPVTPPKKNGCC 196
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.90.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJC7_ECTSI2.170e-11989.60Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z7I1_9STRA9.140e-11184.34Rab5, rab family GTPase n=1 Tax=Tribonema minus Ta... [more]
A0A6V1MPB5_HETAK2.260e-10681.19Hypothetical protein n=2 Tax=Chattonellaceae TaxID... [more]
A0A5D6XMY9_9STRA4.220e-10579.02Uncharacterized protein n=23 Tax=Oomycota TaxID=47... [more]
B8BUG2_THAPS5.020e-10579.00Canine-like rab-type small G protein n=2 Tax=Thala... [more]
F0YJN1_AURAN3.080e-10476.73Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
M4B2C3_HYAAE3.220e-10379.02Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A7S1ZIQ9_TRICV5.140e-10378.00Hypothetical protein n=3 Tax=Mediophyceae TaxID=58... [more]
A0A1Z5KAE2_FISSO1.880e-10278.61Ras-related protein Rab-5C n=1 Tax=Fistulifera sol... [more]
T0Q598_SAPDV2.090e-10278.33Ras-like protein Rab-5A n=4 Tax=Saprolegniaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig10contigF-serratus_M_contig10:981500..988625 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.5
Seed ortholog evalue1.6e-95
Seed eggNOG ortholog2880.D7FJC7
Preferred nameVPS21
KEGG koko:K07889,ko:K17785
KEGG Pathwayko04014,ko04144,ko04145,ko04962,ko05146,ko05152,map04014,map04144,map04145,map04962,map05146,map05152
Hectar predicted targeting categoryother localisation
GOsGO:0000011,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005768,GO:0005769,GO:0005770,GO:0005886,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006892,GO:0006895,GO:0006897,GO:0006906,GO:0006914,GO:0006996,GO:0007032,GO:0007033,GO:0007034,GO:0007154,GO:0007165,GO:0007264,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0010008,GO:0010256,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016462,GO:0016482,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019867,GO:0022411,GO:0022607,GO:0023052,GO:0030139,GO:0031090,GO:0031410,GO:0031901,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031982,GO:0032386,GO:0032509,GO:0032511,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0032880,GO:0033036,GO:0033157,GO:0033365,GO:0034058,GO:0034613,GO:0035556,GO:0035639,GO:0036010,GO:0036094,GO:0036257,GO:0036258,GO:0042886,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044429,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045324,GO:0046907,GO:0048193,GO:0048284,GO:0048308,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051179,GO:0051223,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0060341,GO:0061024,GO:0061025,GO:0061709,GO:0061912,GO:0061919,GO:0065007,GO:0070201,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0090087,GO:0090174,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098657,GO:0098805,GO:1901265,GO:1901363,GO:1903008,GO:1903827
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0092@1,KOG0092@2759
Ec32 ortholog descriptionRab5, RAB family GTPase
Ec32 orthologEc-14_005840.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029,ko04031,ko04131,ko04147
Exons7
Model size1273
Cds size609
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928786.38035-UTR-F-serratus_M_contig10:981499..9816011622928786.38035-UTR-F-serratus_M_contig10:981499..981601Fucus serratus maleUTRF-serratus_M_contig10 981500..981601 +
1690962570.726155-UTR-F-serratus_M_contig10:981499..9816011690962570.726155-UTR-F-serratus_M_contig10:981499..981601Fucus serratus maleUTRF-serratus_M_contig10 981500..981601 +
1622928786.3947809-UTR-F-serratus_M_contig10:983415..9836651622928786.3947809-UTR-F-serratus_M_contig10:983415..983665Fucus serratus maleUTRF-serratus_M_contig10 983416..983665 +
1690962570.736954-UTR-F-serratus_M_contig10:983415..9836651690962570.736954-UTR-F-serratus_M_contig10:983415..983665Fucus serratus maleUTRF-serratus_M_contig10 983416..983665 +
1622928786.4095724-UTR-F-serratus_M_contig10:983715..9839181622928786.4095724-UTR-F-serratus_M_contig10:983715..983918Fucus serratus maleUTRF-serratus_M_contig10 983716..983918 +
1690962570.7464879-UTR-F-serratus_M_contig10:983715..9839181690962570.7464879-UTR-F-serratus_M_contig10:983715..983918Fucus serratus maleUTRF-serratus_M_contig10 983716..983918 +
1622928786.4785562-UTR-F-serratus_M_contig10:988516..9886251622928786.4785562-UTR-F-serratus_M_contig10:988516..988625Fucus serratus maleUTRF-serratus_M_contig10 988517..988625 +
1690962570.7933447-UTR-F-serratus_M_contig10:988516..9886251690962570.7933447-UTR-F-serratus_M_contig10:988516..988625Fucus serratus maleUTRF-serratus_M_contig10 988517..988625 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928786.4228427-CDS-F-serratus_M_contig10:983918..9840451622928786.4228427-CDS-F-serratus_M_contig10:983918..984045Fucus serratus maleCDSF-serratus_M_contig10 983919..984045 +
1690962570.754781-CDS-F-serratus_M_contig10:983918..9840451690962570.754781-CDS-F-serratus_M_contig10:983918..984045Fucus serratus maleCDSF-serratus_M_contig10 983919..984045 +
1622928786.4330726-CDS-F-serratus_M_contig10:986070..9862431622928786.4330726-CDS-F-serratus_M_contig10:986070..986243Fucus serratus maleCDSF-serratus_M_contig10 986071..986243 +
1690962570.7622747-CDS-F-serratus_M_contig10:986070..9862431690962570.7622747-CDS-F-serratus_M_contig10:986070..986243Fucus serratus maleCDSF-serratus_M_contig10 986071..986243 +
1622928786.4445574-CDS-F-serratus_M_contig10:986585..9866921622928786.4445574-CDS-F-serratus_M_contig10:986585..986692Fucus serratus maleCDSF-serratus_M_contig10 986586..986692 +
1690962570.7695634-CDS-F-serratus_M_contig10:986585..9866921690962570.7695634-CDS-F-serratus_M_contig10:986585..986692Fucus serratus maleCDSF-serratus_M_contig10 986586..986692 +
1622928786.4561913-CDS-F-serratus_M_contig10:987761..9878711622928786.4561913-CDS-F-serratus_M_contig10:987761..987871Fucus serratus maleCDSF-serratus_M_contig10 987762..987871 +
1690962570.776999-CDS-F-serratus_M_contig10:987761..9878711690962570.776999-CDS-F-serratus_M_contig10:987761..987871Fucus serratus maleCDSF-serratus_M_contig10 987762..987871 +
1622928786.4692824-CDS-F-serratus_M_contig10:988424..9885161622928786.4692824-CDS-F-serratus_M_contig10:988424..988516Fucus serratus maleCDSF-serratus_M_contig10 988425..988516 +
1690962570.7843413-CDS-F-serratus_M_contig10:988424..9885161690962570.7843413-CDS-F-serratus_M_contig10:988424..988516Fucus serratus maleCDSF-serratus_M_contig10 988425..988516 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig10.90.1prot_F-serratus_M_contig10.90.1Fucus serratus malepolypeptideF-serratus_M_contig10 983919..988516 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig10.90.1

>prot_F-serratus_M_contig10.90.1 ID=prot_F-serratus_M_contig10.90.1|Name=mRNA_F-serratus_M_contig10.90.1|organism=Fucus serratus male|type=polypeptide|length=203bp
MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKV
QLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARYERWC
ESFSGAKSWVKELQRRGDQNVIIALAGNKADLEHRRQVQFDEAHQYAADN
GLIHMETSAKSALNVKKIFVEIAQKLPKATTQPEREAFPIMPPRQEKKSG
CC*
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mRNA from alignment at F-serratus_M_contig10:981500..988625+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig10.90.1 ID=mRNA_F-serratus_M_contig10.90.1|Name=mRNA_F-serratus_M_contig10.90.1|organism=Fucus serratus male|type=mRNA|length=7126bp|location=Sequence derived from alignment at F-serratus_M_contig10:981500..988625+ (Fucus serratus male)
TGTATGTCCAGCAGTCTTAGAGAGCTTTTGAATAACGAAGACTGCCCGTG
AAGCATACTCGGCATCCGACCTTCTTGGAGCAACTTCACACTCTACGCCA
ACGTAAGCACATGCGCCGCACCAGCCCTCTTAAACTGCAGGTTGCGGCAT
GAAGTGTGTACGCGACCTTCGGCGTCCCCAAAACTCGCGTGTCTGACCTA
TTCCCTTGAACTCGTGCGTAGTACATAGTACGCGTAGTACATAGTACTCG
TACCACAGTTTCCGTCTCTTTCGCCGCCCTCCCGATTGTTTATTCGTGCT
TTCCCTACCGTGATCTATCTGTATTCGATCTAACCCAAGCTCTTCGTGAT
CCCCTCAATCTTTTCACTGACACCCCACGTCTCGATAAGGTAAACTAGTA
AACCTCGCCTTGTCGGTGAATCGGGGTACGAGCACGAGTTTGAGGTTTCT
CGTGGGTGAAGCATCTGATCTGCTCCAACCGCCTGCGCATCCCTCCGCAC
ATCACCACCTGTCCACCATAGCACTTAAGCTGCTGTACGTACTCACTGTA
TAACACGAATTATTTTAGTAAATAAATGTCACTATGTACAAGTACACACA
CTTGACTGCGTGTACACTACAACTATAGACATAATAACTCAGATGGTTTA
GATGTGTTCAGTGTAAGTGTGTGTTTGTGTGTTGTGCTGCTGTCGCTTAA
AGGAGTCTTATTTGTATACTGTATGTACGTTTATTTTCTTACCGAAGGAT
ATTGCAGCGCGATTTCTCATTTTTCACAACTTACCTAGGAGTATACTTGT
ACGTACATTACGAGTATAGAATGCGACGAGGCAACGTACTTGTAGGTCAT
CAGATAAACAGTAGCAGAGTATAGACCAACCGGGTAAGGTTTACAATCCT
GCCCGTGGTCACCTAACAGGGAAAACAAACATTTCCCTGTCCCCGTTCGC
GCCTGAGAATTTTGTCTCGCGAGACGGGTTCGGCTATCCCGTCCCACGTC
AGTCTGCACATCGCAAAAGCAGTTGAACGCTTACTCGCTGTGCCGGGTAC
AGGTCAGCTTAGTCTGAAAAAGTTAGACAGCAGACGACAGTGCCATTACT
CTTGTGTACTACTGTTTAGAGAAAAAATTGAACGCATTTACACCTTCTGA
GCATTTTCCAGTCCGAGGGAAAAATGTCAAAACATTTAGGTGGGATCAAA
GGCCACAAAGGCAAAACCTCTTCATGGCATTTAATTTGGCTCCCCAATGT
TAGTAACATCGGGTCAACAGCACAGTTGATGGCGGTTTTAAATAAATAAA
TGGACGCCGCCGCGGAACTCGGGAGGAATTTTGTACGTAAGCACCAGATT
CAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGGGACTGCCGAAC
CCGTCTCGCGGGACCAAGTTCTCAGGCGCGAACGCGGACCGGGAAATATT
ATTTTCCCTTGTTCAGCTGACCACGTGCAGGATTGGCAACCTTACCCGGT
TGATGTATACTCTTACTCTTTCTCTATGTGTGACCATACATAAATATTAT
GTCGGGGAGACCCCCACCTTTACACTGTTGTACACTTCTATTAATAGTAC
GAAATTGTACTTATGTAGAGTCGATCGCCTCTCAAGAGCGCTTTCACGTT
GGACAAAAGCCAGTGCAGTACAGTACAAAACAGTGCAGTGCAGAAGAAAA
CAGTACATTACTCGTACAGTACCTTGCCTTGCGTTGCCGAACTACCGCAT
TAGTATAGACCCTACTTCAGTATTGAATTTTCGCACAAACAACGCTACAT
GGTACATGGTACACCACAACTGACGCACCGATTTAGACGTGACACGCTTT
CTGTTCCACACCCCGCCATTCGCCGACTCGCCCGTCCCATCCCTCCTGTC
CTTGCTTTGCCTTCAGCTCGTGAACGACGAGGGGATAAAGACGAGGTGCT
GCGGACGTGCTGATTTACTCTCACCAAAGCCCAAGGATCACCGGGCCAAG
CGCTCTTTTCCTGGAGCGTTGCGCGAACTCCAGTCCAGAGGAAACAGTTA
CAAAGAGCGAGTCACATCAAGTCAACTGCTCGACAGACAGTCCTTCTTGT
AGCGCACTTACTGAACCACCCGGAACATTGTGGTGAAGGAGCGAAGGAGC
GTTGCGTCGTCGTGACCTCATAGTATATACAGTATATATACACTGCCGAA
AAGCATCGACGGACTGCTGCAAGCGTCTAATTCCGGGGGCCGCTGCTGTG
CTGTGCTGTGCCCTTCGAGTCAACCGCAAGAGAGCCACCGCTATCTCGTG
CTGGAAGCTGGAAGGTTATCGTTATCGGGAACGCTTGTCCCTCCGCGGCC
TGAGTGAGGGGAGGGAACCAATCCGATCACGTCAGACAAAACTACCTCGT
GATAGTTATTGACAGGAGAATGGCTTCGGGGAGAGTGTGTCACTTCAAGC
TGGTGCTTCTTGGGGATACTGCCGTGGGGAAGTCGTGTCTCGTTGTCCGT
TTCGTGAGGGACGAGTTCTTCGAGTACCAAGAGCCCACAATCGGAGGTGA
GATGGCAATGGCTCACGATCGTCGTGATAGCGTTTCGGTAGAAAGCCCCC
ACCCCCCTCTGTTCTTTATAGAGACCAAAACAGGAAGAATACGAACCTCC
GATGTGCTTTTCTTAAAAAATATTTCTTTCCCACTCTACAAGAGTACCGT
TGTTCTACAGACAGTACGTTGTCCCCCCCCCGAGGTTCCGTACCTTAAGG
CCAACCTTTATGGGAAACGAAAAAACAGAAACGCAAAATACAGAAATTTG
TCATTTCTGTGGCCAAAAAATCCGTGGGGAAAAACTGTAGTTGGTCGTTT
ATGGGATAAAGGAAAAATACAAAAAAAACGGGGAGCATATCGGGTTAACG
CCCGGCATTTTCAGCCACCCATCACCGCACAAAGACAGGTGCAAGTATGT
ACACATGGCGAGTATGGATCAACCGAGTAAGGTTGCCAGTCATGCTCGTG
GTCAACTGAACAGGGAAAAATAATATTTCCCTCTCCGCGTTTGTGCCCGA
GAATTTAGCCCGGCGAGACAGGGTCGTTTAGTACTTAATTACGAGTACAT
GGCAAATAGAGTGGGCAGAGCGACATCGTTTCGATGGCGAGCCGTCGGAC
GCTCGTGACACGCAGCCCGTCCCTGCTTGATTGATCTCCGGCGCCACCCA
TTCAACCGCCCCCGCCGCCGGCGATCAGCTTGTCCAGGCCCATCACCTCA
ACAGCTTTTATAAATTTCCTCCAGATCTGCTTGCCCGGGCCCATCACCTC
AACAGATTCTATAAATTTCCTCCAAATCTGCTGCTCCGGCGATCATCGCA
CAACTACTGCTGCTCAGCACCCATCGTACAACAGCACTCGCGAGCTGTTC
TTTGCCGATATTTGATAGGAGGGATGCTACAGTCCCGACCTCCCAATCGT
TCTTGGAAGGTGTGAATCATTTTTGCGGCAAACTAAACTTGTCGAGCCAC
AGACAGAAATGAGCCTCATTTCTGTATGTGGGAAGAGAAAAATAACCTCC
CACAGAAATTCGCCATTCTTGTAGGGCTACATTTCTGCGGCAAGGGGCCC
ATAGCGCCACGTTTACAAAAATTTCGCCACAGAAATTTCACATTTCTGTA
TTTTCATGTCGTTTCTGTTTCCCATAAAGGTTGGCCTAAGCGGAGTCGTT
ACCTTCTATTCAAAACTCTAGCTACTCTGTACTCATCTGCAGCGCTCCTG
GAACGTACAATTTGAACTTTCATTGAGCCCCTCAAGGTGCTGCACACCGA
ACTATACAGTTTATCGTGAGCAAAGCTTGATAATCTATTTACTCTAGAGC
TAATGAGAGGGCACAACTTTCGAGGAAGCAGCCCGTCCGGATTTGATGCG
ATCATGCGGCACATCTACGACTAAGACAAAAATGTATAATTAACCTGCAG
CAGACCATTGCAAAAGCAGCAAAGCTTCTGTTTCTTACCTCTTGCCAGTC
CGTACGAGTAAATTTAAATTTTCTAAATCTATCTTCAATGCGACCAAAAC
TTCTACTGGTACACATGATGAGTATTTGCAGTATGATAGTTGTTCTACGG
TTAAAGCCTTTCTGCCGGCGATCAGTCTACCAGCTCGAAGTCTCGTTGAA
CTCAACGCTATGCGAAGTCTCTTTTCGGCAACGAAGGCGCCAAGAAGGTT
TGATACTCGTAAGGGCTCGAGCGCCTTCATGTTTTCGAGAAAACGCGTCA
GTGCTCTTTTGTCGTCGCTCCCCATCCCCTCTTCTCCCCCCTCCGCATCT
CCTCCTCTCCCCCCTCCGCATCTCCTCCTCTCCCCCCTCCGCATCTCCTC
CTCTCCCCCCTCCGCATCTCCTCCTCTCCCCCCTTTGTCTCTTCTTTTCT
CTTCTCTTCTTCCCCCCCCTTTCCCTCCGATACAAAGAAAATGCAGAGTT
GAAGGAAATTTCCACGCATACTTGTCATCCCTACCCGCAGTGACATTATC
CCATATACCAGTATATATATTGTATCAATCACCGGTGGCAATTTGCTCGC
CCGACTTGTTGGGTCCTCCAGCGGCGTTCTTGACGCAAAAGGTCCAGCTT
GATGACGCAACGGTCAAGTTCGAGATCTGGGATACGGCTGGCCAGGAGCG
ATACCGTAGCCTTGCGCCCATGTACTACCGAGGAGCGGCCGCCGCGATCG
TGGTATACGACGTAACCAATAAGGCGAGATATGAAAGATGGTGTGTTCAT
GGGAGGGGGGGGGGCGGGAGTAAGACGGTTCCTCAGCGAGATCCATGGTA
ATCATGGCCGCTACCAGTTCTCGCGATCGCTGTTCCAGTGGACTTGGCGC
CCTGTTTTCTTGTCTCCACCCGTTTCTCGCCTCTTGTTTATTACTTGCAC
TCGTCCTGCTTTTTCCTGAAACGATCATCTGTCAAGAGATGATGCACGAC
ATCTTGCGCGTGGATGCGCCGCGCCTGGTATGCCTTCGTACACAACGACA
GTGTGCGGTCTGGCTCCTTTTATTACCGCGCGAAATGTCTACCATCAATT
CTTTACAGCCGCTGCTATGTTTACTGTTCTTTCCAGGAATCCTTCAGCGG
CGCCAAGTCGTGGGTCAAGGAGCTGCAGCGCAGAGGAGACCAGAACGTGA
TCATCGCGCTCGCGGGTAACAAGGCCGACCTCGAACACCGCCGGTACGAC
ACAACGCGTGGGTTTGCGTCGAGTTGGTCCCGCAGCAAAAGTGTAGCCGT
CACAATGGCAGTCAAGTCAGCAATGCCGCACCGCCGCCGTCGTGTTTAGC
CGCGACGTTAAGAACTTACTTGTCAGTTTGGTTGAGGCTTTCTATGCGTA
AAAAAAATAAATCTGCATGTAGCACCGTATCCACCACCCCCTAAGGGTGG
ACCAGATGGCGCGCGTGTGCGGGAGTGACGGCCGCTTCGAACGAGGGAAG
CGGAGGCCGACTTTTGTTTTGTCGCTGCTTTTTCAGCGGTAGAGCATCAA
CGTAACATCGTTTCTCGGCTGGCTTTCAAGCTCCAAAAAGGGGACACGTT
TGCCTTCACACCGGATTTGACCCCGCTGGCAGGATCGCTCGCACTGTCCC
ATACGCACGCATACACACACACATAGAAAGCCACGCAGTACCCCCCCCCC
AACAATGTGATGACAGTACGTGTCGGCGTCCACTGTCAGAGCTCGAAGGT
GGGGAGGCTTTGCGACAGGTCCCCCAGAACGACGGTACTGTCGGTCGCCT
TCGAGATGCGGGGTAGGGGCACCACGCTATCGACCGATTTCTGCGACATG
TCCTAATCCATGGCATATATACTTCATACCACTACTGGGTGTGGGAAAAA
GAAAGGCGTACATTTATTGGTCCGCGGTAACCTGCCAAGGTAGCACCCGT
TCGGACGCCATCGGTACGCAATTGCGTGACACGATAAATTCGGGACTGAC
CCGATGGCGTATGACGGCATGGCCACCGCCGCGGAAATCGGGAGGAATCT
CGTAAGTAAGCACCAGATTCAGCCTGGGTATAGAGATGAGCAAGCTGACG
CGGAACGGGACTGCCGAAACCGTTTTGCGAGACCAAATTCTTAGGCGGGA
ACGGGGTCAGGGAAATATTCTTCTTCCCTGTTCAGCTGACCACGAGCATG
ATTGGCAACCTTACCCGGTTAGTTCTTACTCATGCTATATGTGATGACCA
TACATACATACATGCATACATACACTCTTGGGCATTCCTTGTGTTTTCCG
GCTCCCTTACAGGCAAGTACAGTTCGACGAGGCGCACCAGTACGCGGCGG
ACAACGGGCTCATCCACATGGAGACCTCGGCCAAGAGCGCGCTGAACGTC
AAGAAAATTTTCGTCGAGATCGGTGAGCAGCGCAGACCGAGAACTTTGCG
ATCCGAATGAGTGCGTAGTTGACGGCGTTGAGCACCCCCAAAGCGTTCCT
TCTTCCTTTGTGACAAGCGCCCCAGTTTTTTTTTCGCCAATGCCTTTTTT
TTTTTTAAACCGCACAGATCGCACCGGTGCGATCCATATCACAAACACAT
GGGGATAAAGTTTTGTTTCGATCCCCGTGGTGCTGCCTTCCAAACGGGCT
TTTACTTATTAACCAAAATAGCAAGAGAAACGCTGCGGGTGATGCGTATG
CCATCTCGGGGGGGGGGGAAGGGGAAGTATACCCGTGGCGTGTTTTATAC
CATCAGCTAGGGCATGGGACTCAGGGTTGGGCGAGGGAAAGAGGAAAGGC
TAGAGCTCACCTGTGTGTAGCGCGAAGATTTTGTAATCTCGCGACAATAG
CAAGAAATTACATCAACGTCATTCGAGAGGCGTGAAATGTGCTCGTGCGA
AGACGTTGATCGAGTCTCACCCCCCCACCCCCCCATACGCACACGCACAC
GCACACCGCGATCTTGAAACTGCAGCCCAGAAATTGCCCAAGGCCACGAC
GCAGCCGGAGAGGGAAGCATTCCCGATCATGCCGCCTAGGCAGGAGAAGA
AGTCTGGGTGTTGCTGAGCGAGAGACCGCCCTCCCATCTTCGGTCCGGTC
TGTCTATTTTCTCTTACTTCACAAAACCCTGTAGCACCTCGATCCTTTGC
TACCTTGCTGTCCACGCCTCTCCCAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig10:981500..988625+

>mRNA_F-serratus_M_contig10.90.1 ID=mRNA_F-serratus_M_contig10.90.1|Name=mRNA_F-serratus_M_contig10.90.1|organism=Fucus serratus male|type=CDS|length=1218bp|location=Sequence derived from alignment at F-serratus_M_contig10:981500..988625+ (Fucus serratus male)
ATGGCTTCGGGGAGAGTGTGTCACTTCAAGCTGGTGCTTCTTGGGGATAC
TGCCGTGGGGAAGTCGTGTCTCGTTGTCCGTTTCGTGAGGGACGAGTTCT
TCGAGTACCAAGAGCCCACAATCGGAGATGGCTTCGGGGAGAGTGTGTCA
CTTCAAGCTGGTGCTTCTTGGGGATACTGCCGTGGGGAAGTCGTGTCTCG
TTGTCCGTTTCGTGAGGGACGAGTTCTTCGAGTACCAAGAGCCCACAATC
GGAGCGGCGTTCTTGACGCAAAAGGTCCAGCTTGATGACGCAACGGTCAA
GTTCGAGATCTGGGATACGGCTGGCCAGGAGCGATACCGTAGCCTTGCGC
CCATGTACTACCGAGGAGCGGCCGCCGCGATCGTGGTATACGACGTAACC
AATAAGGCGAGATATGAAAGATGGTGTCGGCGTTCTTGACGCAAAAGGTC
CAGCTTGATGACGCAACGGTCAAGTTCGAGATCTGGGATACGGCTGGCCA
GGAGCGATACCGTAGCCTTGCGCCCATGTACTACCGAGGAGCGGCCGCCG
CGATCGTGGTATACGACGTAACCAATAAGGCGAGATATGAAAGATGGTGT
GAATCCTTCAGCGGCGCCAAGTCGTGGGTCAAGGAGCTGCAGCGCAGAGG
AGACCAGAACGTGATCATCGCGCTCGCGGGTAACAAGGCCGACCTCGAAC
ACCGCCGGAATCCTTCAGCGGCGCCAAGTCGTGGGTCAAGGAGCTGCAGC
GCAGAGGAGACCAGAACGTGATCATCGCGCTCGCGGGTAACAAGGCCGAC
CTCGAACACCGCCGGCAAGTACAGTTCGACGAGGCGCACCAGTACGCGGC
GGACAACGGGCTCATCCACATGGAGACCTCGGCCAAGAGCGCGCTGAACG
TCAAGAAAATTTTCGTCGAGATCGGCAAGTACAGTTCGACGAGGCGCACC
AGTACGCGGCGGACAACGGGCTCATCCACATGGAGACCTCGGCCAAGAGC
GCGCTGAACGTCAAGAAAATTTTCGTCGAGATCGCCCAGAAATTGCCCAA
GGCCACGACGCAGCCGGAGAGGGAAGCATTCCCGATCATGCCGCCTAGGC
AGGAGAAGAAGTCTGGGTGTTGCTGACCCAGAAATTGCCCAAGGCCACGA
CGCAGCCGGAGAGGGAAGCATTCCCGATCATGCCGCCTAGGCAGGAGAAG
AAGTCTGGGTGTTGCTGA
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