mRNA_F-serratus_M_contig10.85.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig10.85.1 vs. uniprot
Match: D7FJD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJD2_ECTSI) HSP 1 Score: 193 bits (491), Expect = 5.480e-52 Identity = 101/154 (65.58%), Postives = 118/154 (76.62%), Query Frame = 2 Query: 2 ADFRAREHHQGERVRAQRLEQEAAEMRPCTFAPHTNDRVLRAQGPVLVRGLGRHLELKDVAQKRGEERREREAHAFGVRPGAVRRTVLGETVLKPFSLSEGNSRGWWGQRRRRHAEERAAQCPFQPWTVEGERSMAMSRLLECSSVLAESVACG 463 A+ RARE Q ER A R E+E AEM+ CTF P TN +LRA+GPVLVRGLGRHLELKDVAQ+R ERR EA AFGVRP AVRR+VLGET+++PFSLS N +GWW +RR RH ERAAQC F+PWTVE ER A+SRLL+ SSVL+ + G Sbjct: 794 AELRAREREQEERFNALRQEKEVAEMQRCTFVPQTNSAILRAEGPVLVRGLGRHLELKDVAQQRERERRXXEARAFGVRPRAVRRSVLGETIVEPFSLSSDN-KGWWQERRMRHEAERAAQCTFKPWTVEAERGRALSRLLDWSSVLSSQSSRG 946
BLAST of mRNA_F-serratus_M_contig10.85.1 vs. uniprot
Match: A0A6H5KJ13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ13_9PHAE) HSP 1 Score: 168 bits (426), Expect = 2.950e-47 Identity = 84/113 (74.34%), Postives = 96/113 (84.96%), Query Frame = 2 Query: 104 TNDRVLRAQGPVLVRGLGRHLELKDVAQKRGEERREREAHAFGVRPGAVRRTVLGETVLKPFSLSEGNSRGWWGQRRRRHAEERAAQCPFQPWTVEGERSMAMSRLLECSSVL 442 TN +LRA+GPVLVRGLGRHLELKDVAQ+R ERREREA AFGVRPGAVRR+VLGET+++PFSLS N +GWW +RR RH ERAAQC F+PWTVE ER A+SRLL+ SSVL Sbjct: 130 TNSAILRAEGPVLVRGLGRHLELKDVAQQRERERREREAQAFGVRPGAVRRSVLGETIVEPFSLSSDN-KGWWQERRMRHEAERAAQCTFKPWTVEAERGRALSRLLDWSSVL 241
BLAST of mRNA_F-serratus_M_contig10.85.1 vs. uniprot
Match: A0A2P6V9Q3_9CHLO (Uncharacterized protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V9Q3_9CHLO) HSP 1 Score: 80.9 bits (198), Expect = 3.340e-13 Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 2 Query: 53 RLEQEAAEMRPCTFAPHTNDRVLRAQGPVLVRGLGRHLELKDVAQKRGEERREREAHAFGVRPGAVRRTVLGETVLKPFSLS-----EGNSRGWWGQRRRRHAEERAAQCPFQPWTVEGERSMAMSRLLECSSVLAESVACG 463 R E+E+A +R CTFAP N R + A+GPV+VRGL R LELK +A+++ E +R A F RP A + G TV +PF L+ E + +RA QCPF+P T G R ++ LL S L+ES G Sbjct: 672 RFEEESARLRECTFAPDINRRRVEAKGPVVVRGLERVLELKQLAERQRVEAEQRAAKVFHQRPKAKQ----GATVPQPFQLAGHALLEAKAADKQASLLHSTLAQRAQQCPFRPQTNYGARRDKLAHLLAQPS-LSESELAG 808
BLAST of mRNA_F-serratus_M_contig10.85.1 vs. uniprot
Match: A0A836CJI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJI8_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 5.590e-13 Identity = 46/98 (46.94%), Postives = 57/98 (58.16%), Query Frame = 2 Query: 38 RVRAQRLEQEAAEMRPCTFAPHTNDRVLRAQGPVLVRGLGRHLELKDVAQKRGEERREREAHAFGVRPGAVRRTVLGETVLKPFSLSEGNSRGWWGQR 331 R+ + E+E AEM+ CTFAP GP+LVRGLGRHLEL D A++ R A AF VRPGA RR G T+++PF LS +R W R Sbjct: 532 RLATAQAEREVAEMQACTFAPTLPTPPPPTSGPILVRGLGRHLELCDAARRAAAAADARAAAAFAVRPGAQRRGSDGLTLVQPFRLSGAEARVKWAAR 629
BLAST of mRNA_F-serratus_M_contig10.85.1 vs. uniprot
Match: A0A7S1XLT3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLT3_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 5.400e-12 Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = 2 Query: 5 DFRAREHHQGERVRAQRLEQEAAEMRPCTFAPHTNDRVLR--AQGPVLVRGLGRHLELKDVAQKRGEERREREAHAFGVRPGAVRRTVLGETVLKPFSLSEGN 307 D+ ++ E+ + +R E+E EMR CTF P T R A PV+VRGLGRHLEL+++A+++ EE+RERE A+G + R G T+ KPF LS + Sbjct: 451 DYARKQETLAEKRQRERAERELREMRECTFKPKTITRKPPKVAPKPVVVRGLGRHLELREMAKRKAEEQRERERKAWGGSTSSGGRNAAGVTIQKPFKLSRND 553
BLAST of mRNA_F-serratus_M_contig10.85.1 vs. uniprot
Match: W4FFR4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FFR4_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 2.090e-11 Identity = 53/138 (38.41%), Postives = 77/138 (55.80%), Query Frame = 2 Query: 35 ERVRAQRLEQEAAEMRPCTFAPHTNDRVLR-AQGPVLVRGLGRHLELKDVAQKRGEERREREAHAFGVRPGAVRRTVLGETVLKPFSLSEGNSRGWWGQRRRRHAEERA-AQCPFQPWTVEGERSMAMSRLLECSSVL 442 +++ QR E E++ CTFAP N + ++GPV+VRGLGR LELK +A+++ ER+EREA F R TV +PF+LS R +R + +E+ +C FQP T+E + + RLLE S L Sbjct: 697 QKLEDQRNSLEFQELQACTFAPTINKSTTKPSRGPVVVRGLGRFLELKQLAKRQVAERKEREAKVFTQTRDYTPRAY---TVPQPFNLSFDQRRRAREERLKAEMDEKELGECTFQPHTMEHKNRRLIHRLLEQSQEL 831
BLAST of mRNA_F-serratus_M_contig10.85.1 vs. uniprot
Match: A0A6A4ZSG0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZSG0_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 6.650e-11 Identity = 52/138 (37.68%), Postives = 76/138 (55.07%), Query Frame = 2 Query: 35 ERVRAQRLEQEAAEMRPCTFAPHTNDRVLR-AQGPVLVRGLGRHLELKDVAQKRGEERREREAHAFGVRPGAVRRTVLGETVLKPFSLSEGNSRGWWGQRRRRHAEERA-AQCPFQPWTVEGERSMAMSRLLECSSVL 442 +++ QR E E++ CTFAP N + ++GPV+VRGLGR LELK +A+++ ER+EREA F R TV +PF+LS R +R + +E+ +C FQP T+E + + LLE S L Sbjct: 239 QKLEDQRNSLEFQELQACTFAPAINKSTTKPSRGPVVVRGLGRFLELKQLAKRQVAERKEREAKVFTQTRDYTPRAY---TVPQPFNLSFDQRRRAREERLKAEMDEKELGECTFQPHTMEHKNRRLIHSLLEQSQEL 373
BLAST of mRNA_F-serratus_M_contig10.85.1 vs. uniprot
Match: A0A2P6TS59_CHLSO (Uncharacterized protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TS59_CHLSO) HSP 1 Score: 73.9 bits (180), Expect = 6.770e-11 Identity = 51/134 (38.06%), Postives = 66/134 (49.25%), Query Frame = 2 Query: 38 RVRAQRLEQEAAEMRPCTFAPHTNDRVLRAQGPVLVRGLGRHLELKDVAQKRGEERREREAHAFGVRPGAVRRTVLGETVLKPFSLS-----EGNSRGWWGQRRRRHAEERAAQCPFQPWTVEGERSMAMSRLL 424 R A R E+E +R C+FAP N ++A+GPVLVRGL RHLEL+ +A +R E R A F P RT G TV +PF L E + + ER C F+P T R ++RLL Sbjct: 680 RAAAARAEEEEQRLRECSFAPDINRTRVQAKGPVLVRGLDRHLELRQLADRRRAEADARAARVFHANP----RTKQGATVPQPFQLRGHALLEAKAAQKQAAALQSALGERMQACTFKPQTNHARRREQLARLL 809
BLAST of mRNA_F-serratus_M_contig10.85.1 vs. uniprot
Match: A0A7S2W6P4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W6P4_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 3.820e-10 Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 2 Query: 38 RVRAQRLEQEAAEMRPCTFAPHTND--RVLRAQGPVLVRGLGRHLELKDVAQKRGEERREREAHAFGVRPGAVRRTVLGETVLKPFSLSEGNSRGWWGQRRRRHAEERAAQCPFQPWT 385 R++ QRLE E E++ CTF P N+ L+ PV+V GLGR++EL+++A+++ EE+REREA F +VR TV +PF+LSE RR++ E C FQP T Sbjct: 635 RLQQQRLENEYEELKECTFTPLVNNDPSSLQRDIPVVVNGLGRYMELRELAKRQVEEQREREAKIFMEDMTSVRPEPY--TVPQPFNLSEAPQ----SSTRRKYTGELPHDCTFQPKT 746
BLAST of mRNA_F-serratus_M_contig10.85.1 vs. uniprot
Match: A0A6G0WG84_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WG84_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.640e-9 Identity = 48/135 (35.56%), Postives = 74/135 (54.81%), Query Frame = 2 Query: 35 ERVRAQRLEQEAAEMRPCTFAPHTNDRVLRAQGPVLVRGLGRHLELKDVAQKRGEERREREAHAFGVRPGAVRRTVLGETVLKPFSLSEGNSRGWWGQRRRRHAEERAAQCPFQPWTVEGERSMAMSRLLECSSV 439 +++ +R +E +++ CTFAP N V ++ PV+VRGLGR LELK++A+++ E+R+REA AF R TV PF L + R + RR A +C F P T+E + RL+E S++ Sbjct: 616 QKLNDERQSREFEQLQACTFAPTINRDVKTSKKPVVVRGLGRFLELKELAKRQENEQRQREAKAFTQTKDYKPRAY---TVPAPFHLIS-DERANQRRERRIPAASEVDECTFHPKTLEHANRRLIERLVEHSNL 746 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.85.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig10.85.1 >prot_F-serratus_M_contig10.85.1 ID=prot_F-serratus_M_contig10.85.1|Name=mRNA_F-serratus_M_contig10.85.1|organism=Fucus serratus male|type=polypeptide|length=132bp MRPCTFAPHTNDRVLRAQGPVLVRGLGRHLELKDVAQKRGEERREREAHAback to top mRNA from alignment at F-serratus_M_contig10:722960..724462+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig10.85.1 ID=mRNA_F-serratus_M_contig10.85.1|Name=mRNA_F-serratus_M_contig10.85.1|organism=Fucus serratus male|type=mRNA|length=1503bp|location=Sequence derived from alignment at F-serratus_M_contig10:722960..724462+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig10:722960..724462+ >mRNA_F-serratus_M_contig10.85.1 ID=mRNA_F-serratus_M_contig10.85.1|Name=mRNA_F-serratus_M_contig10.85.1|organism=Fucus serratus male|type=CDS|length=792bp|location=Sequence derived from alignment at F-serratus_M_contig10:722960..724462+ (Fucus serratus male)back to top |